The Yeasts - A Taxonomic Study

The Yeasts, a taxonomic study

This book is dedicated to the memory of Anna Kockova-Kratochvilova Jacomina Lodder Takeshi Tsuchiya Nicolau J. van Uden Lynferd J. Wickerham

The Yeasts, A Taxonomic Study Fourth edition

Edited by

Cletus P. Kurtzman Microbial Properties Research National Center for Agricultural Utilization Research Agricultural Research Service, U.S. Department of Agriculture Peoria, Illinois, USA

Jack W. Fell Rosenstiel School of Marine and Atmospheric Science University of Miami Key Biscayne, Florida, USA

ELSEVIER Amsterdam • Lausanne • New York • Oxford • Shannon • Singapore • Tokyo

ELSEVIER SCIENCE B.V. Sara Burgerhartstraat 25 P.O. Box 211, 1000 AE Amsterdam, The Netherlands

© 1998 Elsevier Science B.V. All rights reserved.

This work is protected under copyright by Elsevier Science, and the following terms and conditions apply to its use: Photocopying Single photocopies of single chapters may be made for personal use as allowed by national copyright laws. Permission of the publisher and payment of a fee is required for all other photocopying, including multiple or systematic copying, copying for advertising or promotional purposes, resale, and all forms of document delivery. Special rates are available for educational institutions that wish to make photocopies for non-profit educational classroom use. Permissions may be sought directly from Elsevier Science Rights & Permissions Department, PO Box 800, Oxford 0X5 IDX, UK; phone: (+44) 1865 843830, fax: (+44) 1865 853333, e-mail: [email protected]. You may also contact Rights & Permissions directly through Elsevier's home page (http://www.elsevier.nl), selecting first 'Customer Support', then 'General Information', then 'Permissions Query Form'. In the USA, users may clear permissions and make payments through the Copyright Clearance Center, Inc., 222 Rosewood Drive, Danvers, MA 01923, USA; phone: (978) 7508400, fax: (978) 7504744, and in the UK through the Copyright Licensing Agency Rapid Clearance Service (CLARCS), 90 Tottenham Court Road, London WIP OLP, UK; phone: (+44) 171 436 5931; fax: (+44) 171 436 3986. Other countries may have a local reprographic rights agency for payments. Derivative Works Tables of contents may be reproduced for intemal circulation, but permission of Elsevier Science is required for external resale or distribution of such material. Permission of the publisher is required for all other derivative works, including compilations and translations. Electronic Storage or Usage Permission of the publisher is required to store or use electronically any material contained in this work, including any chapter or part of a chapter. Contact the publisher at the address indicated. Except as outlined above, no part of this work may be reproduced, stored in a retrieval system or transmitted in any fomi or by any means, electronic, mechanical, photocopying, recording or otherwise, without prior written permission of the publisher. Address permissions requests to: Elsevier Science Rights & Permissions Department, at the mail, fax and e-mail addresses noted above. Notice No responsibility is assumed by the Publisher for any injury and/or damage to persons or property as a matter of products liability, negligence or otherwise, or from any use or operation of any methods, products, instructions or ideas contained in the material herein. Because of rapid advances in the medical sciences, in particular, independent verification of diagnoses and drug dosages should be made. First printing 1998 Second impression 1999 Library of Congress Cataloging in Publication Data The y e a s t s : a t a x o n o m i c s t u d y / e d i t e d by C l e t u s P. Kurtzman and Jack W. F e l l . — 4 t h e d . p. cm. I n c l u d e s b i b l i o g r a p h i c a l r e f e r e n c e s and i n d e x . ISBN 0 - 4 4 4 - 8 1 3 1 2 - 8 (a I k . p a p e r ) 1 . Yeast f u n g i — C l a s s i f i c a t i o n . 2. F u n g i — C l a s s i f i c a t i o n . I . K u r t z m a n , C. P. I I . F e l l , Jack W. QK617.5.Y48 1997 5 7 9 . 5 • 6 2 — d c21 96-46920 CIP

ISBN:

0 444 81312 8

@ The paper used in this publication meets the requirements of ANSI/NISO Z39.48-1992 (Permanence of Paper). Printed in The Netherlands.

Preface The importance of yeasts is underscored by our often daily consumption of bread as well as fermented beverages. Recent advances in biotechnology have increased reliance on yeasts for pharmaceuticals and for bulk biochemicals such as citric acid. Furthermore, clinically important yeasts are commonplace, especially with increasing numbers of immune-suppressed patients, and biologists are continuing to discover the importance of yeasts in the ecosystem. All of these areas of science and technology have a common need, the rapid and accurate identification of yeasts. The goal of this book is to provide that information. This book, the fourth edition of The Yeasts, A Taxonomic Study, represents a continuation of the monographic series begun by J. Lodder and N.J.W. Kreger-van Rij (1st edn., 1952), J. Lodder (2nd edn., 1970) and N.J.W. Kregervan Rij (3rd edn., 1984). As with each successive edition, the number of taxa treated has increased. In the third edition (1984), 60 genera and 500 species were described, whereas in the fourth edition, there are 100 genera representing over 700 species. Numbers alone do not fully reflect the increased coverage of the present treatment. Besides newly described species, the current edition includes additional genera of yeastlike taxa, some of which, such as Ascoidea and Dipodascus, are now recognized as members of the ascomycetous yeast clade, whereas others, such as Trichosporonoides and Prototheca, are not considered to be yeasts but are included because they are morphologically similar to yeasts and sometimes confused with them. Similarly, we broadened the discussion of the basidiomycetes to acquaint the reader with some of the dimorphic species whose yeast phases are often found on isolation plates. Molecular studies have shown many of these dimorphic species have close phylogenetic relationships with the commonly recognized basidiomycetous yeasts. Not surprisingly, molecular sequence analyses have contributed prominently to the classification system used in the fourth edition. However, because sequence data are not yet available for all known species, a phylogenetically-based classification system is not fully developed. As a consequence, the placement of many species in genera and families is uncertain. Despite these limitations, the system of classification presented in the current edition is more predictive of natural relationships than was possible in earlier treatments. The current edition features an expanded list of assimilation tests over that of earlier editions. Besides providing increased diagnostic resolution of taxa, the additional physiological data will aid biotechnologists searching for species that are capable of unique biochemical transformations. This edition includes chapters on the importance of yeasts and on current methods used for their classification. We hope readers will find these chapters useful, and that they will provide a start for more extensive study with a fascinating group of fungi that we know as the yeasts. Cletus P. Kurtzman Jack W. Fell

This Page Intentionally Left Blank

Contents Preface Contributors Acknowledgements Use of this book

Part I. Classification of yeasts 1. Definition, Classification and Nomenclature of the Yeasts C.R Kurtzman and J.W. Fell

Part II. Importance of yeasts 2. Yeasts pathogenic for humans D.G. Ahearn 3. The industrial and agricultural significance of yeasts A.L. Demain, H.J. Phaff and C.P Kurtzman 4. Ecology and yeasts Marc-Andre Lachance and William T. Starmer

Part III. Ultrastructural and molecular properties used for yeast classification 5. Cytology and ultrastructure of yeasts and yeastlike fimgi Royall T. Moore 6. Chemotaxonomy based on the polysaccharide composition of cell walls and capsules H.J. Phaff 7. Electrophoretic comparisons of enzymes M. Yamazaki, C.P. Kurtzman and J. Sugiyama 8. Mycocins (Killer Toxins) W.I. Golubev 9. Nuclear DNA hybridization: Quantitation of close genetic relationships C.P. Kurtzman 10. Ribosomal RNA/DNA sequence comparisons for assessing phylogenetic relationships C.P. Kurtzman and PA. Blanz

Part IV. Methods 11. Methods for the isolation, maintenance and identification of yeasts D. Yarrow 12. Identification of coenzyme Q (ubiquinone) homologs Y Yamada 13. Analysis of carbohydrate composition of cell walls and extracellular carbohydrates H. Roeijmans, H. Prillinger, C. Umile, J. Sugiyama, T. Nakase and T. Boekhout 14. Determination of ethanol production Ann Vaughan-Martini and Alessandro Martini

Part Va. Classification of the ascomycetous taxa 15. Discussion of teleomorphic and anamorphic ascomycetous yeasts and a key to genera C.P. Kurtzman 16. A key to the anamorph genera of yeastlike Archi- and Euascomycetes G.S. de Hoog

v xiii xv xvii

1 3

7 9 13 21

31 33 45 49 55 63 69

75 77 101 103 107

109 Ill 123

Part Vb. Descriptions of teleomorphic ascomycetous genera and species 17. Ambrosiozyma van der Walt M.Th. Smith 18. Arxiozyma van der Walt & Yarrow C.R Kurtzman 19. Ascoidea Brefeld & Lindau G.S. de Hoog 20. Babjevia van der Walt & M.Th. Smith M.Th. Smith 21. Cephaloascus Hanawa G.S. de Hoog and C.R Kurtzman 22. Citeromyces Santa Maria C.R Kurtzman 23. Clavispora Rodrigues de Miranda M.A. Lachance and H.J. Phaff 24. Coccidiascus Chatton emend. Lushbaugh, Rowton & McGhee H.J. Phaff 25. Cyniclomyces van der Walt & D.B. Scott H.J. Phaff and M.W Miller 26. Debaryomyces Lodder & Kreger-van Rij Nom. Cons T. Nakase, M. Suzuki, H.J. Phaff and C.R Kurtzman 27. Dekkera van der Walt M.Th. Smith 28. Dipodascopsis Batra & P. Millner M.Th. Smith and G.S. de Hoog 29. Dipodascus de Lagerheim G.S. de Hoog, M.Th. Smith and E. Gueho 30. Endomyces Reess G.S. de Hoog 31. Endomycete-like genera of mycoparasitic fungi D. Malloch and G.S. de Hoog 32. Eremothecium Borzi emend. Kurtzman G.S. de Hoog, C.R Kurtzman, H.J. Phaff and M.W. Miller 33. Galactomyces Redhead & Malloch G.S. de Hoog, M.Th. Smith and E. Gueho 34. Hanseniaspora Zikes M.Th. Smith 35. Issatchenkia Kudryavtsev emend. Kurtzman, Smiley & Johnson C.R Kurtzman 36. Kluyveromyces van der Walt emend, van der Walt M.A. Lachance 37. Lipomyces Lodder & Kreger-van Rij M.Th. Smith 38. Lodderomyces van der Walt C.R Kurtzman 39. Metschnikowia Kamienski M.W. Miller and H.J. Phaff 40. Nadsonia Sydow M.W. Miller and H.J. Phaff 41. Pachysolen Boidin & Adzet C.R Kurtzman 42. Pichia E.C. Hansen emend. Kurtzman C.R Kurtzman 43. Protomyces Unger C.R Kurtzman

127 129 134 136 141 143 146 148 153 154 157 174 178 181 194 197 201 209 214 221 227 248 254 256 268 271 273 353

44. Saccharomyces Meyen ex Reess Ann Vaughan-Martini and Alessandro Martini 45. Saccharomycodes E.C. Hansen M.W. Miller and H.J. Phaff 46. Saccharomycopsis Schionning C.P. Kurtzman and M.Th. Smith 47. Saturnispora Liu & Kurtzman C.P. Kurtzman 48. Schizosaccharomyces Lindner Ann Vaughan-Martini and Alessandro Martini 49. Sporopachydermia Rodrigues de Miranda M.A. Lachance and H.J. Phaff 50. Stephanoascus M.Th. Smith, van der Walt & E. Johannsen M.Th. Smith and G.S. de Hoog 51. Torulaspora Lindner C.P. Kurtzman 52. Wickerhamia Soneda H.J. Phaff and M.W. Miller 53. Wickerhamiella van der Walt C.P. Kurtzman 54. Williopsis Zender C.P. Kurtzman 55. Yarrowia van der Walt & von Arx C.P. Kurtzman 56. Zygoascus M.Th. Smith M.Th. Smith 57. Zygosaccharomyces Barker C.P. Kurtzman 58. Zygozyma van der Walt & von Arx M.Th. Smith

Part Vc. Descriptions of anamorptiic ascomycetous genera and species 59. Aciculoconidium D.S. King & S.-C. Jong M.Th. Smith 60. Arxula van der Walt, M.Th. Smith & Y. Yamada M.Th. Smith 61. Blastobotrys von Klopotek G.S. de Hoog and M.Th. Smith 62. Botryozyma Shann & M.Th. Smith M.Th. Smith 63. Brettanomyces Kufferath & van Laer M.Th. Smith 64. Candida Berkhout S.A. Meyer, R.W Payne and D. Yarrow 65. Geotrichum LinkiFries G.S. de Hoog, M.Th. Smith and E. Gueho 66. Kloeckera Janke M.Th. Smith 67. Lalaria R.T. Moore R.T. Moore 68. Myxozyma van der Walt, Weijman & von Arx C.P. Kurtzman 69. Oosporidium Stautz M.Th. Smith 70. Saitoella S. Goto, Sugiyama, Hamamoto & Komagata D.G. Ahearn, J. Sugiyama and R.B. Simmons

358 372 374 387 391 395 400 404 409 411 413 420 422 424 433

437 439 441 443 449 450 454 574 580 582 592 598 600

71. Schizoblastosporion Ciferri M.Th. Smith 72. Sympodiomyces Fell & Statzell A. Statzell-Tallman and J.W. Fell 73. Trigonopsis Schachner D. Yarrow

Part Via. Classification of the basidiomycetous taxa 74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous yeasts T. Boekhout, R.J. Bandoni, J.W. Fell and K.J. Kwon-Chung 75. Diagnostic descriptions and key to presently accepted heterobasidiomycetous genera T. Boekhout 76. Keys to the genera and species of ballistoconidia-forming yeasts and yeastlike fungi T. Boekhout

Part VIb. Descriptions of teleomorphic basidiomycetous genera and species 77. Agaricostilbum Wright R.J. Bandoni and T. Boekhout 78. Bulleromyces Boekhout & A. Fonseca T. Boekhout 79. Chionosphaera Cox K.J. Kwon-Chung 80. Cystofilobasidium Oberwinkler & Bandoni K.J. Kwon-Chung 81. Erythrobasidium Hamamoto, Sugiyama & Komagata J. Sugiyama and M. Hamamoto 82. Filobasidiella Kwon-Chung K.J. Kwon-Chung 83. Filobasidium Olive K.J. Kwon-Chung 84. Leucosporidium Fell, Statzell, I.L. Hunter & Phaff A. Statzell-Tallman and J.W Fell 85. Mrakia Y. Yamada & Komagata J.W Fell and A. Statzell-Tallman 86. Rhodosporidium Banno J.W. Fell and A. Statzell-Tallman 87. Sporidiobolus Nyland A. Statzell-Tallman and J.W. Fell 88. Sterigmatosporidium Kraepelin & Schulze A. Statzell-Tallman 89. Tilletiaria Bandoni & Johri T. Boekhout 90. Tremelloid genera with yeast phases. Sirobasidiaceae: Fibulobasidium, Sirobasidium; Tremellaceae: Bulleromyces, Holtermannia, Tremella, Trimorphomyces R.J. Bandoni and T. Boekhout 91. Xanthophyllomyces Golubev WI. Golubev

Part Vic. Descriptions of anamorphic basidiomycetous genera and species 92. Bensingtonia Ingold emend. Nakase & Boekhout T. Boekhout and T Nakase 93. Bullera Derx T. Boekhout and T. Nakase 94. Cryptococcus Vuillemin J.W. Fell and A. Statzell-Tallman

602 603 605

607 609 627 635

637 639 641 643 646 654 656 663 670 676 678 693 700 703

705 718

721 723 731 742

95. Fellomyces Y. Yamada & Banno I. Banno and Y. Yamada 96. Hyalodendron Diddens G.S. de Hoog and M.Th. Smith 97. Itersonilia Derx T. Boekhout 98. Kockovaella Nakase, Banno & Y Yamada T. Nakase and I. Banno 99. Kurtzmanomyces Y Yamada, M. Itoh, Kawasaki, Banno & Nakase Y Yamada and I. Banno 100. Malassezia Baillon D.G. Ahearn and R.B. Simmons 101. Moniliella Stolk & Dakin G.S. de Hoog and M.Th. Smith 102. Phaffia M.W. Miller, Yoneyama & Soneda M.W. Miller and H.J. Phaff 103. Pseudozyma Bandoni emend. Boekhout and a comparison with the yeast state of Ustilago maydis (De Candolle) Corda T. Boekhout and J.W. Fell 104. Reniforma Pore & Sorenson W.G. Sorenson and R.S. Pore 105. Rhodotorula EC. Harrison J.W. Fell and A. Statzell-Tallman 106. Sporobolomyces Kluyver & van Niel T. Boekhout and T. Nakase 107. Sterigmatomyces Fell emend. Y Yamada & Banno I. Banno and Y Yamada 108. Sympodiomycopsis Sugiyama, Tokuoka & Komagata J. Sugiyama and S.-O. Suh 109. Tilletiopsis Derx ex Derx T. Boekhout 110. Trichosporon Behrend E. Gueho, M.Th. Smith and G.S. de Hoog 111. Trichosporonoides Haskins & Spencer G.S. de Hoog and M.Th. Smith 112. Tsuchiyaea Y Yamada, Kawasaki, M. Itoh, Banno & Nakase Y Yamada and I. Banno

768 773 775 777 780 782 785 789

790 798 800 828 844 846 848 854 873 878

Part VII. Prototheca, a yeastlike alga

881

113. Prototheca Kriiger R.S. Pore

883

Part VIII. Key to species 114. Key to species R.W. Payne, C.R Kurtzman and J.W. Fell Summary of species characteristics Glossary of terms used in this book References Index of taxa by genus and species Index to species and varietal names

889 891

915 949 955 1017 1035

This Page Intentionally Left Blank

Contributors D.G. AHEARN, Department of Biology, P.O. Box 4010, Georgia State University, Atlanta, GA 30302-4010, USA R.J. BANDONI, Department of Botany, The University of British Columbia, #3529-6270 University Blvd., Vancouver, B.C., Canada V6T 1Z4 I. BANNO, Institute for Fermentation, Osaka, 17-85, Juso-honmachi 2-chome, Yodogawa-ku, Osaka 532, Japan RA. BLANZ, Institute of Botany, University of Graz, Holteigasse 6, A-8010 Graz, Austria T. BOEKHOUT, Centraalbureau voor Schimmelcultures, Yeast Division, Julianalaan 67, 2628 BC Delft, The Netherlands G.S. DE HOOG, Centraalbureau voor Schimmelcultures, RO. Box 273, 3740 AG Baarn, The Netherlands A.L. DEMAIN, Department of Biology, 68-223, Massachusetts Institute of Technology, 77 Massachusetts Avenue, Cambridge, MA 02139, USA J.W. FELL, Rosenstiel School of Marine and Atmospheric Science, University of Miami, 4600 Rickenbacker Causeway, Key Biscayne, FL 33149, USA W.I. GOLUBEV, Russian Collection of Microorganisms, Institute for Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushchino, Moscow region 142292, Russian Federation E. GUEHO, Unite de Mycologie, Institut Pasteur, 25, rue du Dr Roux, 75724 Paris, Cedex 15, France M. HAMAMOTO, Japan Collection of Microorganisms, The Institute of Physical and Chemical Research (RIKEN), Hirosawa, Wako-shi, Saitama 351-01, Japan C.P KURTZMAN, National Center for Agricultural Utilization Research, USDA-ARS, 1815 N. University Street, Peoria, IL 61604-3999, USA K.J. KWON-CHUNG, Molecular Microbiology Section, Laboratory of Clinical Investigation, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD 20892, USA M.-A. LACHANCE, Department of Plant Sciences, University of Western Ontario, London, Ont., Canada N6A 5B7 D. MALLOCH, Department of Botany, University of Toronto, Toronto, Ont., Canada M5S lAl A. MARTINI, Departimento di Biologia Vegetale, Sez. di Microbiologia Applicata, Universita degli Studi di Perugia, Borgo XX Giugno 74, 1-06121 Perugia, Italy Sally A. MEYER, Department of Biology, Georgia State University, Atlanta, GA 30303, USA M.W MILLER, Department of Food Science and Technology, University of California, Davis, CA 95616, USA R.T. MOORE, School of Applied Biological & Chemical Sciences, University of Ulster, Coleraine, Co. Londonderry, BT52 ISA, Northern Ireland, UK T NAKASE, Japan Collection of Microorganisms, The Institute of Physical and Chemical Research (RIKEN), Hirosawa, Wako-shi, Saitama 351-01, Japan

R.W. PAYNE, Statistics Department, lACR-Rothamsted, Harpenden, Hertfordshire AL5 2JQ, England, UK H.J. PHAFF, Department of Food Science and Technology, University of California, Davis, CA 95616, USA R.S. PORE, Department of Microbiology and Immunology, Medical Center, West Virginia University, Morgantown, WV 26506-9177, USA H. PRILLINGER, Institut fur Angewandte Mikrobiologie, Universitat fur Bodenkultur, Wien, NuBdorfer Lande 11, A-1190 Wien, Austria H. ROEUMANS, Centraalbureau voor Schimmelcultures, PO. Box 273, 3740 AG Baarn, The Netherlands R.B. SIMMONS, Department of Biology, Georgia State University, Atlanta, GA 30303, USA M.TH. SMITH, Centraalbureau voor Schimmelcultures, Yeast Division, Julianalaan 67, 2628 BC Delft, The Netherlands W.G. SORENSON, Centers for Disease Control, National Institute for Occupational Safety and Health - NIOSH, 1095 Willowdale Road, Morgantown, WV 26505-2888, USA William T. STARMER, Department of Biology, 108 College Place, Syracuse University, Syracuse, NY 13244-1270, USA A. STATZELL-TALLMAN, Rosenstiel School of Marine and Atmospheric Science, University of Miami, 4600 Rickenbacker Causeway, Key Biscayne, FL 33149, USA J. SUGIYAMA, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113, Japan S.-O. SUH, Institute of Molecular and Cellular Biosciences, The University of Tokyo, Yayoi 1-1-1, Bunkyo-ku, Tokyo 113, Japan M. SUZUKI, Japan Collection of Microorganisms, The Institute of Physical and Chemical Research (RIKEN), Hirosawa, Wako-shi, Saitama, 351-01, Japan C. UMILE, Salus-Braumapharm, Biomedical Department, Industriegasse 7, A-1231 Vienna, Austria A. VAUGHAN-MARTINI, Departimento di Biologia Vegetale, Sez. di Microbiologia Applicata, Universita degli Studi di Perugia, Borgo XX Giugno 74, 1-06121 Perugia, Italy Y YAMADA, Laboratory of Applied Microbiology, Department of Agricultural Chemistry, Faculty of Agriculture, Shizuoka University, 836 Ohya, Shizuoka 422, Japan M. YAMAZAKI, Tokyo Metropolitan Institute for Education of Technology, Hongo 1-3-3, Bunkyo-ku, Tokyo 113, Japan D. YARROW, Centraalbureau voor Schimmelcultures, Yeast Division, Julianalaan 67, 2628 BC Delft, The Netherlands

Acknowledgements RJ. Bandoni thanks T.W. Flegel for providing illustrations of basidiomata of Tremella fuciformis and Holtermannia sp. The helpful suggestions of Mary Berbee, concerning the introductory chapters on the Heterobasidiomycetes and Tremellales, are also acknowledged with thanks. I. Banno and Y. Yamada thank Kozaburo Mikata, Research Head of the Yeast Section, Institute for Fermentation, Osaka, for his cooperation in laboratory work. RA. Blanz acknowledges Michael Gottschalk for his cooperation in analyzing 5S rRNAs. J.W. Fell acknowledges research support by the U.S. National Science Foundation, Ocean Sciences Division, Biological Oceanography. Technical assistance by Rebecca Roemig and the photographic expertise by Don Heuer, RSMAS, University of Miami is greatly appreciated. C.R Kurtzman thanks Christie J. Robnett, Eleanor Basehoar-Powers and Millie Jo Smiley for technical assistance, Georgetta Stonewall and June Kestner for manuscript processing and the preparation of tables and indexes, and Kerry O'Donnell for helpful discussions. M.-A. Lachance gratefully acknowledges research funding by the Natural Science and Engineering Council of Canada. Thanks are given to Ming Zhan for his assistance with the photomicrography of Kluyueromyces species, and J.R. Nicoli for bringing attention to the recent literature on probiotics, discussed in the yeast ecology chapter. Sally A. Meyer thanks Eric B. O'Neill for his laboratory assistance and support in the preparation of the Candida manuscript, the graduate and undergraduate students whose projects on Candida species provided much useful information, and Robert B. Simmons for the excellent photography. T. Nakase thanks Masako Takashima for assistance. R.W. Payne gratefully acknowledges the grant-aided support that lACR receives from the Biotechnology & Biological Sciences Research Council of the United Kingdom. H. Prillinger thanks the Osterreichische Nationalbank for research sponsorship. M.Th. Smith thanks G.A. Poot for assistance. William T Starmer acknowledges the U.S. National Science Foundation for support of research on the ecology of yeasts. A. Vaughan-Martini and A. Martini gratefully acknowledge the technical assistance of Stefania Barcaccia and Fausto Macarelli. The Editors are indebted to the Staff at the Centraalbureau voor Schimmelcultures, Delft and Baarn, The Netherlands, for generously supplying many of the yeast cultures examined during the preparation of this book. Special thanks are extended to Walter Gams, Centraalbureau voor Schimmelcultures, Baarn, The Netherlands, who kindly checked names of taxa for correctness, and who generously provided taxonomic advice.

This Page Intentionally Left Blank

Use of this book 1. Introductory chapters The first four sections of this book provide an overall introduction to the yeasts. Section I discusses the current definition of yeasts, their classification, and the rules for their nomenclature. Section II focuses on the importance of yeasts as human, animal, and plant pathogens, their role in biotechnology, and their ecological importance. Section III provides chapters on the ultrastructural, biochemical and molecular biological properties that are currently being used to recognize yeasts and to develop a framework for their classification. Methods for isolation and identification of yeasts are given in Section IV along with protocols for various biochemical analyses that are used for characterization of species. 2. Chapters on the genera and species The arrangement of taxa in the fourth edition is somewhat different from that of previous editions. Because it is possible to determine whether isolates are ascomycetes or basidiomycetes from the diazonium blue B (DBB) test and from ultrastructure of cell walls, anamorphs can now be placed in their appropriate taxonomic class. Consequently, the taxonomic descriptions start with ascomycetous yeasts that have known sexual states, followed by the anamorphic ascomycetous genera. In turn, the teleomorphic basidiomycetes are described followed by their anamorphs. In previous editions, anamorphs from both classes were placed in the same section. The introductory chapters for both the ascomycetes and the basidiomycetes include brief diagnostic descriptions of each genus followed by a key to genera. A key to the anamorphic genera of yeastlike archi- and euascomycetes also has been provided. 3. Descriptions of species Each species description begins with a designation of the anamorph or teleomorph, where known, followed by a listing of synonyms. The characterization proceeds to morphological and physiological descriptions. Noteworthy information for the species is given in the section entitled "Comments". Each genus description concludes with the section entitled "Comments on the genus", where the history of the genus is given along with a discussion of its classification. Many of the comments sections also provide information of interest to biotechnologists, clinicians and ecologists. The following symbols are used for the fermentation and assimilation reactions given with species descriptions: Symbol

Meaning

+

positive

1

latent (rapidly developing a positive reaction after a lag)

+/1

positive or latent

s

positive but slow

w

weak

ws

weak and slow

+/w

positive or weak

w/-

weak or negative

Iw

latent but weak (rapidly developing a weak reaction after a lag)

-/I

negative or latent

V

variable

-

negative

n

no data

Representative species have been illustrated for each genus. The illustrations, which may be either drawings or photographs, included a scale marker bar and growth conditions.

A summary table of fermentation and assimilation reactions and certain key biochemical characteristics has been compiled. For easy access, taxa are listed alphabetically, first by genus and then by species. The following abbreviated symbols are used in this table: + w

+, S, 1, +/1 w, ws, Iw

X V n

+/W V, w/-, -/I no data or not applicable

4. Keys to taxa Keys to genera are given in the introductory chapters to the ascomycetes and the basidiomycetes, and keys to the species assigned to a particular genus are given in the chapter discussing that genus. A key has also been constructed that includes all species of ascomycetes and basidiomycetes for which there are available data. In addition to the preceding, the following specialized keys have been developed: key to selected human- and animal-associated yeasts (see chapter 2: yeasts pathogenic for humans); key to anamorphic genera of yeastlike archi- and euascomycetes (chapter 16); key to yeasts forming ballistospores (chapter 76). 5. Yeastlike taxa Some of the yeastlike taxa likely to be mistaken as yeasts are briefly discussed in this book. For example, species of the genus Aureobasidium are commonly isolated dimorphic euascomycetes that often appear white to light pink in color and yeastlike on isolation plates. Similarly, the achlorophyllic algal genus Prototheca is often misidentified as a yeast, and for this reason a chapter on the genus is included. 6. Indexes to taxa The fourth edition contains two indexes to taxa. The first of these is a standard index that lists genera followed by assigned species and their synonyms. Validly accepted combinations are given in bold type. The second index alphabetically lists all species and variety names followed by all genera to which the species and varieties were ever assigned. Validly accepted genera are given in bold type. 7. Glossary A glossary has been provided that includes morphological, genetic, and molecular biological terms. 8. References The references for all chapters have been consolidated into a single list. By using a consolidated list, sufficient space was saved that titles could be included, whereas this would not have been possible if each chapter had a reference list.

Parti

Classification of yeasts

This Page Intentionally Left Blank

Chapter 1

Definition, Classification and Nomenclature of the Yeasts C.R Kurtzman and J.W. Fell Contents 1. Definition and classification of the yeasts 2. Taxonomy

International Botanical Congress, Yokohama, Japan, in 1993, and has been published by Koeltz Scientific Books, D-61453 Konigstein, Germany. The following is a brief discussion of the Botanical Code as it applies to yeasts.

1. Definition and classification of the yeasts

2.1. Description of new taxa

The English word yeast and its equivalents in many other languages are based on words meaning foam and to rise, direct references to the fermentation processes giving beer and bread. For this reason yeasts are often thought of as fermentative ascomycetous fungi similar to Saccharomyces cerevisiae. In fact, it is not uncommon in some areas of molecular biology to treat the words "yeast" and ''Saccharomyces'" as synonyms. The discovery that some taxa are basidiomycetes has broadened our perception of the nature of yeasts. As a consequence, we have come to view yeasts as fungi with vegetative states that predominantly reproduce by budding or fission, resulting in growth that is comprised mainly of single cells. An imprecise distinction has been made between yeasts and those dimorphic filamentous fungi that oftentimes produce abundant yeastlike growth. Yeasts can be defined as those fimgi whose vegetative growth predominantly results from budding or fission and which do not form their sexual states within or upon a fruiting body. For ascomycetous yeasts, this distinction has been substantiated by molecular comparisons, which demonstrate the budding and fission yeasts to be phylogenetically distinct from one another and from the euascomycetes (see chapter 15). One exception is the genus Eremascus, which has unenclosed asci, but budding cells are not formed. A similar distinction can be made for basidiomycetous yeasts, which appear phylogenetically separate from the mushrooms and other taxa that form complex fruiting bodies (see chapter 74). In summary, yeasts, whether ascomycetes or basidiomycetes, are generally characterized by budding or fission as the primary means of vegetative reproduction and have sexual states that are not enclosed in fruiting bodies.

2.1.1. Species: Publication of new species must include a description of essential characters as well as a diagnosis that distinguishes the taxon from previously described species. Since January 1, 1935, the description and/or diagnosis must be given in Latin. Failure to comply with this requirement results in an invalidly described species termed a "nomen invalidum" (nom. inval). A nomen invalidum also results if publication is not in a recognized scientific journal, e.g., as in a patent or a trade magazine. If the new species is designated without a description or a diagnosis, it is invalid and termed a "nomen nudum" (nom. nud.). Names of taxa must be given in Latin or modified in such a way that they follow the rules of Latin derivation including appropriate gender designations. If a name has been incorrectly crafted, it may be treated as an "orthographic error" and corrected. An example is Pichia membranifaciens for which the 1888 spelling "membranaefaciens'' has been corrected in this book. The authority name does not change due to the spelling correction. Other requirements for valid publication include deposition of type material in a publicly accessible herbarium. This material must be an original specimen of the organism, and it is to be dead and dried. The 1994 Code now allows lyophilized specimens to be valid type material (holotype) and that living cultures derived from the lyophilized material are considered ex typo, i.e., from the type. It seems that once the original material is exhausted, there is no longer type material available. A possible solution to this problem would be to lyophilize new material and designate it as a neotype, a convention permitted when the original type material is lost or destroyed and the species can be otherwise recognized. This discussion leads to the recognition that a majority of presently accepted yeast species are technically invalid because legitimate type material has not been preserved. A portion of presently lyophilized stocks in culture collections should be held from distribution and designated as neotypes. Consequently, the designation of "Type strain" given for each cultivatable species described in this book

2. Taxonomy Rules for taxonomy of the yeasts and other fungi fall under the authority of the International Code of Botanical Nomenclature. The most recent version of this Code (Greuter et al. 1994) was adopted at the Fifteenth

/. Classification of yeasts Table 1 Major yeast culture collections Country

Collections

USA

Agricultural Research Service Culture Collection (NRRL), National Center for Agricultural Utilization Research, 1815 N. University St., Peoria, IL 61604 American Type Culture Collection (ATCC), 12301 Parklawn Dr., Rockville, MD 20852 Culture Collection, Department of Food Science and Technology (FST-UCD), University of California, Davis, CA 95616 Yeast Genetics Stock Center (YGSC), Department of Biophysics and Medical Physics, University of California, Berkeley, CA 94720

Italy

Industrial Yeasts Collection (DBVPG), Dipartimento di Biologia Vegetale, Sez. Microbiologia Applicata, Universita di Perugia, Borgo XX Giugno 74, 06121 Perugia

Japan

Institute for Fermentation (IFO), 17-85 Juso-honmachi 2-chome, Yodogawa-ku, Osaka 532 Japan Collection of Microorganisms (JCM), RIKEN, Hirosawa, Wako-shi, Saitama 351-01

Netherlands

Centraalbureau voor Schimmelcultures (CBS), Yeast Division, Julianalaan 67, 2628 BC Delft

People's Republic of China

Center for Collection of General Microbiological Cultures (CCGMC), Institute of Microbiology, Academia Sinica, PO. Box 2714, Beijing

Portugal

Portuguese Yeast Culture Collection (PYCC), Biotechnology Unit, New University of Lisbon, Quinta da Torre, 282J Monte de Caparica

Germany

Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM), Braunschweig

Russia

Department of Type Cultures of Microorganisms, Institute of Biochemistry and Physiology of Microorganisms, Russian Academy of Sciences, Pushino, Moscow region, 142292

Slovakia

Slovak Collection of Yeasts (CCY), Institute of Chemistry, Slovak Academy of Sciences, Dubravska cesta 9, 84238 Bratislava Research Institute for Viticulture and Enology (RIVE), Matuskova 25, 83311 Bratislava

United Kingdom

National Collection of Yeast Cultures (NCYC), AFRC Food Research Institute, Colney Lane, Norwich NR4 7UA

can, at best, represent a neotype. The 1994 Code does recognize the need for living cultures in the practice of modern taxonomy and states in Recommendation 8B.1: "Whenever practicable a living culture should be prepared from the holotype material of the name of a newly described taxon of fungi or algae and deposited in at least two institutional culture or genetic resource collections. (Such action does not obviate the requirement for a holotype specimen under Art 8.2)." The 1994 Code further states in Recommendation 8B.2: "In cases where the nomenclatural type is a culture permanently preserved in a metabolically inactive state (see Art. 8 Ex. 1), any living isolates obtained from that should be referred to as "ex-type" {ex typo), "ex-holotype" (ex holotypo), "exisotype" (ex isotypo), etc., in order to make it clear they are derived from the type but are not themselves the nomenclatural type." From these recommendations, it is clear that the Code strongly encourages scientific cooperation and communication through active sharing of published taxonomic specimens. A listing of commonly used yeast culture collections is given in Table 1. 2.1.2. Genera, families, orders: The rules for describing new genera, families and orders are similar to those for describing new species. These taxa must be based on a validly described species and provided with a Latin

description and diagnosis. The rules of priority are briefly described below, but one exception is that orders are exempt from priority usage. 2.2. Basionyms, synonyms, priority of usage Because of the inexact art of species characterization, as well as the occasional situation in which two independent investigators describe the same new species, the Botanical Code has provided a set of rules to reconcile resulting problems. The following example should prove helpful to the reader, but the Code needs to be consulted for full details. 1 Saccharomycopsis fibuligera (Lindner) Klocker (1924) Synonyms 2 Endomyces fibuligera Lindner (1907) 3 Endomycopsis fibuligera (Lindner) Dekker (StellingDekker 1931) 4 Pichia fibuligera (Lindner) Boidin, Pignal, Lehodey, Vey & Abadie (1964) 5 Endomyces lindneri Saito (1913) 6 Saccharomycopsis lindneri (Saito) Klocker (1924) 7 Endomycopsis fibuligera (Lindner) Dekker var. lindneri Dekker (Stelling-Dekker 1931) 8 Endomyces hordei Saito (1914) 9 Saccharomycopsis hordei (Saito) Klocker (1924)

1. Definition, Classification and Nomenclature of the Yeasts / C.P. Kurtzman and J. W Fell

10 Endomycopsisfibuligera(Lindner) Dekker var. hordei and the substitution of economically or medically impor(Saito) Dekker (Stelling-Dekker 1931) tant names for an older but obscure basionym. 11 Candida lactosa Dwidjoseputro & Wolf (1970) The following citations provide examples of descriptions of new taxa and the conservation of older names, In the example, Saccharomycopsis fibuligera (1) is but the most recent edition of the Botanical Code should the currently accepted name. The species was originally be consulted as well. described by Lindner in 1907 as Endomycesfibuligera(2) and transferred to Saccharomycopsis by Klocker in 1924. Other authors transferred the species to Endomycopsis (3) and to Pichia (4), but in all cases, the original author, New species and genera Lindner, is listed in parentheses. The other species Fell, J.W., A.C. Statzell, I.L. Hunter and H.J. Phaff. 1969. listed (5-11) are misidentified strains of S. fibuligera. Leucosporidium gen. n., the heterobasidiomycetous stage The genus assignments for some of these "species" were of several yeasts of the genus Candida. Antonie van also changed before it was recognized that they were Leeuwenhoek 35, 433-462. conspecific with S.fibuligera.In the context of the Code, New combinations Endomycesfibuligera(2) is the basionym or basal name Kurtzman, C.P. 1995. Relationships among the genera for the species. Synonyms 2, 3 and 4 are nomenclatural Ashbya, Eremothecium, Holleya and Nematospora deteror obligate synonyms of S.fibuligerabecause they are all mined from rDNA sequence divergence. J. Ind. Microbiol. based on the same type strain. Synonyms 5-11 are termed 14, 523-530. taxonomic or facultative synonyms because they are based on different type strains. Species 6 and 7 represent Conservation of taxa obligate synonyms of Endomyces lindneri, hence the Fell, J.W., C.P Kurtzman and K.J. Kwon-Chung. 1989. listing of synonyms is ordered by priority of publication Proposal to conserve Cryptococcus (fungi). Taxon 38, date of obligate synonyms followed by publication date of 151-156. Because the Botanical Code requires an accounting facultative synonyms and their own obligate synonyms. The Code requires, with few exceptions, that the first of names previously used, taxonomy sometimes appears described name has priority of usage. Thus, Endomyces fickle. A more positive view is that lists of synonyms fibuligera Lindner (1907) is the basionym, and personal document the clarification of species relationships over preference for another name to serve as basionym, e.g., time. If we are to accept this latter view, we are also Endomyces lindneri Saito (1913), is generally not allowed. obligated not to make name changes in haste as our Arguments for exceptions might include uncertain names science progresses.

This Page Intentionally Left Blank

Part II

Importance of yeasts

This Page Intentionally Left Blank

Chapter 2

Yeasts pathogenic for humans D.G. Ahearn Contents 1. Description 2. Key to selected human- and animal-associated yeasts

9 11

1. Description The principal yeasts pathogenic for humans are Candida albicans and Cryptococcus neoformans. Candida albicans is an asexual, diploid (possibly aneuploid), plemorphic fungus with an ascomycetous-type cell wall. This species is endogenous in the oral-, gastrointestinal-, or urinogenital tracts of humans and other warm blooded animals. Candida albicans may be categorized as an obligate commensal because its host-free occurrence is relatively rare. Probably 40 to 60% of the adult population harbors C albicans. Infections are usually of endogenous origin, but patient to patient spread can occur (Ahearn 1988, Jones 1990). The syndromes produced by Candida albicans are highly diversified including vulvovaginitis, dermatitis, cystitis, fever, myositis, hepatic disfunction, and mental confusion. These may occur singly or in combinations dependent upon the superficial, locally invasive, or deep nature of the infection. Candida albicans is involved in millions of superficial infections per year (mainly vulvovaginitis) and in over 90% of the systemic or deep yeast infections (estimated in the USA for the 1980's to range from 5000 to 8000 per year). Strains of C albicans vary in their virulence, but as with all yeast infections, the balance between transient or commensal colonization or parasitism is dependent upon the physiological status of the host. Chronic superficial candidiasis is often associated with malnutrition, pregnancy, and diseases with impaired immune systems such as diabetes and malignant neoplasms. Oral candidiasis and localized esophagitis show a particularly high frequency among patients infected with the human immunodeficiency virus (Phelan et al. 1987). Recently, a yeast phenotypically similar to C albicans, but apparently genetically distinct, C dubliniensis, has been associated with AIDS (Sullivan et al. 1995). Candidiema may be indicative of deep or systemic yeast infections involving two or more organs. Such grave infections are frequently iatrogenic resulting from hyperalimentation, broad spectrum antibiotics, and immunosuppressive or antineoplastic therapies. In contrast to C albicans, Cryptococcus neoformans,

the anamorph of Filobasidiella neoformans, is not usually a commensal of humans. Cryptococcus neoformans, a basidiomycetous yeast, includes two varieties that are often haploid when isolated from nature. Cryptococcus neoformans var. neoformans includes serotypes A, D, and AD, and C neoformans var. gatti includes serotypes B and C. Serotypes A and D are usually associated with soil enriched with pigeon droppings. Serotype A is most common in the U.S.A. and serotype D is reported mostly from Europe. Serotypes B and C seem confined to warm regions (Kwon-Chung and Bennett 1984); in particular serotype B has been associated with the flowering of Eucalyptus camaldulensis (Ellis and Pfeiffer 1990). Cryptococcus neoformans most often primarily infects the lungs with mild symptoms. In stressed patients, a pneumococcal-type pneumonia is not uncommon. This species has a predilection for the central nervous system and may produce, if untreated, a fatal meningoencephalitis, particularly among the immunocompromised. Reporting of cryptococcosis is not mandatory, therefore its incidence is unknown. In Georgia, U.S.A. in 1978, Bowman and Ahearn noted 76 cases of cryptococcosis. Kaufman and Blumer (1978) estimated that there were about 300 cases of cryptococcal meningitis throughout the U.S.A. for that same year. In 1987, in Georgia, U.S.A. at least 146 infections occurred (Ahearn, unpublished). Throughout the U.S.A., there has been a notable increase in reported cryptococcosis. The Centers for Disease Control, Atlanta, Georgia, U.S.A., has documented cryptococcosis as the primary presenting syndrome for the acquired immune deficiency syndrome (AIDS) in 135 cases for 1983, 279 cases for 1984, 514 cases for 1985, and 704 cases for 1986 (R.M. Selik, personal communication). This steep increase involves fatal cryptococcal meningitis in 7-17%) of patients with AIDS (Gal et al. 1986, Zuger et al. 1986). By 1990, cryptoccoccosis had become the fourth to fifth most important secondary infection complicating AIDS in the U.S.A. (R.M. Selik, personal communication). At least 2000 cases of extrapulmonary cryptococcosis (an incidence of about 7%) occurred among AIDS patients in the U.S.A. in 1990 (Centers for Disease Control 1991). Probably 450 more cases of cryptococcosis occurred among non-AIDS patients for this same year. The actual rate of increase of cryptococcosis over the past decade cannot be determined because not only is

10

//. Importance of yeasts

reporting of the disease not mandatory, but the basis for defining AIDS, which is receiving intensive monitoring, has become less stringent during the past few years. Nevertheless, the worldwide increase in the incidence of life threatening cryptococcosis is alarming. Although oral candidiasis, and to some degree esophagitis, are prognostic of HIV infection (Phelan et al. 1987), systemic candidiasis has not shown the same relative increase among AIDS patients as has cryptococcosis. Candida tropicalis is probably the third most important yeast pathogen of humans. This species does not normally produce germ tubes or chlamydoconidia, but elongated pseudohyphal cells may develop commonly in some strains in serum at 37°C. Candida tropicalis, like C. albicans, is a diploid ascomycetous-type yeast, but it is commonly isolated from host-free habitats. Both species have overlapping antigenic properties; C tropicalis and C. albicans serotype A bear the mannan specific epitotes 1,4,5,6, whereas C. albicans serotype B has 1,4,5,13b (Tsuchiya et al. 1965). Hamajima et al. (1988) detected a cell wall antigen (t) in C tropicalis that permits its serological distinction from C. albicans ser A. DNAs from the holotype strains of these species show insignificant DNA relatedness, but rare strains with phenotypic properties intermediate between those of the holotypes show intermediate (40-50%) relatedness with the separate species (Hamajima et al. 1988; Ahearn and Meyer, unpublished). Deep or systemic infections by C tropicalis appear to be increasing and there is some suggestion that the prognosis for a disseminated infection with C tropicalis is more grave than that for C albicans (Ahearn and Lawrence 1984). Because host factors in general are preeminent in yeast infections, it is difficult to determine specific virulence factors for many yeasts. Nevertheless, there appears to be an association of specific species with certain syndromes. In part, this may reflect a natural habitat association. For example, the usually commensal or mildly pathogenic, lipophilic Malassezia spp. may cause fungemia and fatal pulmonary infections of neonates receiving lipid supplementation via broviac catheters (Gueho et al. 1987b, Danker et al. 1987, Larocco et al. 1988). Even the important industrial yeast, Saccharomyces cerevisiae, which can be expected to be ingested in normal diets, may produce fatal complications in immune deficient patients (Ossama et al. 1989; Aucott et al. 1990). Funguria or fimgemia by skin mycota or commensals of mucus membranes (e.g., Candidaparapsilosis, Candida glabrata, respectively) frequently follow combinations of extensive antibacterial therapy and catheterization (Solomon et al. 1984, Van Cutsem et al. 1986). In other instances, such as with the emerging pathogens Trichosporon spp., Candida lusitaniae and Candida noruegensis, the selective effect of antifimgal therapies may be an additional factor (Ahearn and McGlohn 1984; Gargeya et al. 1990, Nielsen et al. 1990, Walsh et al. 1990). Selected yeasts implicated as pathogens of humans and

their common habitats are listed in Table 2. This list is restricted in comparison to general lists of medically important (or human- and animal-associated) yeasts because it includes only those species that fit the criteria of McGinnis et al. (1980): - the fungus must be isolated; - the fungus must be properly identified; - the clinical disease must be compatible with a mycosis; - the fiangus must be seen in clinical and pathological specimens. Species such as Rhodotorula rubra, Candida famata, C haemulonii, C krusei, C lipolytica, and C. rugosa, which have been associated mainly with transient fungemia, have not been included. Undoubtedly, specific case histories in the future will indicate these species and others can produce a broader syndrome. For example, C haemulonii, a genetically heterogenous form species complex, is more frequently becoming associated with lower limb ulcers and fiingemia (Gargeya et al. 1991, Lehmann et al. 1991). The increasing incidence of yeast infections has stimulated the development of commercial yeast identification systems (Land et al. 1991). Some of these systems provide for accurate identification of most strains of the common medically important yeasts, but generally the data bases for these systems include information for less than 50 species. Also, given strains may deviate from the norm in key characters. For example, C. albicans may not readily produce germ tubes, chlamydoconidia, or even pseudohyphae (Ahearn and Schlitzer 1984). Some strains of Cryptococcus neoformans, particularly a mating types, may produce melanin only under certain conditions (Nurudeen and Ahearn 1979); other rare strains may not demonstrate urease activity or assimilate inositol. Rhamnose may not be assimilated by rare strains of C. lusitaniae (Gargeya et al. 1990). An increasing number of auxotrophs of C albicans and C glabrata have been observed among yeasts submitted for identification to the Centers for Disease Control, Atlanta, GA. Such isolates, probably induced by the administration of antineoplastic drugs, do not grow on the generally used synthetic media, but often grow in the complex fermentation broths. A selective phenotypic key for the identification of the more common adventitious yeast pathogens and some of the common animal-associated yeasts is presented below Steps in the key include multiple characters, so that the key permits a presumptive species identification, i.e., a distinction of the adventitious species from most species presented as animal-associated in this monograph. For definitive identification, however, additional diagnostic tests must be performed. The key does not distinguish the genotypic species present in the form species C albicans, C haemulonii, C parapsilosis, C tropicalis and Malassezia furfur

2. Yeasts pathogenic for humans / D.G. Ahearn Table 2 Syndromes and habitats of yeasts causing infections in humans Species

Representative infections

Habitats

Superficial

Deep

Association with humans

Host-free

Candida albicans

vaginitis

disseminated

mucus membranes

soil, air, water, plants (rare)

Candida glabrata

vaginitis (rare)

pyleonephritis, osteomyelitis

urine, sputa, feces

soil, water (rare)

Candida

otitis (rare)

endocarditis, joint infection

sputa, feces

soil, water

Candida kefyr {= Kluyueromyces marxianus)

unknown

disseminated

sputa

dairy products

Candida krusei

unknown

disseminated

sputa

water, soil

Candida lusitaniae

unknown

disseminated

sputa, feces

animal manure

Candida noruegensis ("^Pichia norvegensis)

unknown

disseminated

sputa, urine

water, soil

Candida parapsilosis

onchomycosis (rare)

endocarditis, endophthalmitis

skin, sputa

soil, water, plants

Candida tropicalis

vaginitis (rare)

peritonitis, endocarditis

sputa, urine, feces

organically enriched soil and aquatic habitats

Candida uiswanathii

unknown

meningitis

unknown

unknown

Cryptococcus

skin (rare)^

pulmonary, CNS

sputa (rare)

aged pigeon droppings, eucalyptus flowers

Malassezia furfur (M. pachydermatis)

dermatitis

pulmonary

skin

unknown

Pichia angusta

unknown

lymph nodes

unknown

insects, soil

unknown

disseminated

sputa

food (fruits), soil

white piedra

disseminated

skin, hair

soil, water

guilliermondii

neoformans

Saccharomyces

cereuisiae

Trichosporon spp.

Secondary manifestation of deep infection.

2. Key to selected human- and animal-associated yeasts 1.

a Growth on Sabouraud's, malt agars, or yeast nitrogen base with glucose agar b No growth on the above media without addition of olive oil c

2(la).

3(2b). 4(3a). 5 (4a). 6(5a). 7(5b). 8(7b). 9(4b). 10(9b). 1 l(lOa). 12(10b).

a b a b a b a b a b a b a b a b a b a b a b

-^ 2

Malassezia furfur: M. sympodialis: No growth on yeast nitrogen base with glucose agar without olive oil, growth present on Sabouraud's or malt agars Malassezia pachydermatis: Germ tubes produced Candida albicans: C. dubliniensis: No germ tubes produced -^ 3 Hyphae or pseudohyphae absent or scarce -^ 4 Hyphae or pseudohyphae well developed ^16 Inositol assimilated (rarely negative), starch synthesized -^ 5 Inositol not assimilated, starch not synthesized -^ 9 Nitrate assimilated -^ 6 Nitrate not assimilated -^ 7 Sucrose assimilated Cryptococcus albidus: Sucrose not assimilated Cryptococcus terreus: Lactose assimilated Cryptococcus laurentii: Lactose not assimilated -^ 8 Galactitol assimilated; melanin synthesized Cryptococcus neoformans: Galactitol not assimilated; melanin not synthesized Cryptococcus uniguttulatus: Cultures red or orange; nitrate not assimilated Rhodotorula mucilaginosa: Cultures not red or orange; nitrate assimilated or not assimilated -^ 10 Nitrate assimilated -^ 11 Nitrate not assimilated —^ 12 Methanol assimilated Pichia angusta: Methanol not assimilated Pichia jadinii: Lactose assimilated Candida famata: Lactose not assimilated -^ 13

p. 782 p. 783 p. 782 p. 476 p. 479

p. 748 p. 764 p. 759 p. 762 p. 765 p. 820

p. 286 p. 314 p. 503

12 13(12b). 14(13b). 15(14b).

16(3b). 17(16a). 18(17a). 19(17b). 20(19a). 21 (20b). 22(16b). 23(22b). 24(23b). 25(24a). 26(25a). 27(26b). 28(25b). 29(28a). 30(29b).

//. Importance of yeasts D-Xylose and cellobiose assimilated (see also C. famata and C. norvegensis) D-Xylose assimilated; cellobiose not assimilated —^14 Galactitol assimilated Galactitol not assimilated -^ 15 Raffinose assimilated and fermented Raffinose neither assimilated nor fermented Arthroconidia produced ^17 Arthroconidia not produced -^ 22 Diazonium Blue B (DBB) reaction positive -^ 18 DBB reaction negative -^ 19 Nitrate assimilated Nitrate not assimilated D-Xylose assimilated -^ 20 D-Xylose not assimilated Cellobiose assimilated Cellobiose not assimilated -^ 21 Arthroconidia in chains within primary filaments Arthroconidia in branched chains arising on branches from primary Lactose fermented Lactose not fermented -^ 23 Raffinose and melibiose assimilated Raffinose and melibiose not assimilated -^ 24 Trehalose assimilated -^ 25 Trehalose not assimilated Cellobiose assimilated -^ 26 Cellobiose not assimilated -^ 28 L-Rhamnose assimilated (rarely negative) L-Rhamnose not assimilated -^ 27 Triphenyl Tetrazolium Chloride (TTC) reaction positive TTC reaction negative to weak Maltose fermented, TTC reaction positive or negative —^ 29 Maltose not fermented, TTC reaction positive (rose to red color) Sucrose fermented, TTC reaction positive (deep maroon color) Sucrose not fermented, TTC reaction negative —> 30 Maltose assimilated (repeat germ tube test) Maltose not assimilated

Candida guilliermondii:

p. 511

Candida haemulonii:

p. 511

Saccharomyces cerevisiae: Candida glabrata: Candida norvegensis (Pichia norvegensis):

p. 361 p. 508 p. 328

Trichosporon pullulans: Trichosporon ovoides complex:

p. 869 p. 869

Geotrichum capitatum: Geotrichum fermentans:

p. 575 p. 576

Galactomyces geotrichum: filaments Geotrichum klebahnii: Candida kejyr (Kluyveromyces marxianus):

p. 210 p. 578 p. 236

Candida guilliermondii:

p. 511

Candida krusei:

p. 519

Clavispora {Candida) lusitaniae:

p. 148

Candida tropicalis: Candida viswanathii:

p. 563 p. 570

Candida parapsilosis: Candida tropicalis:

p. 536 p. 563

Candida albicans: Candida zeylanoides:

p. 476 p. 571

Chapter 3

The industrial and agricultural significance of yeasts A.L. Demain, H.J. Phaff and C.P. Kurtzman Our ability to harness the activities of yeasts has given us not only food and drink but deeper insights into the chemical basis of our own existence. These microscopic organisms surely rank among the most fruitful and versatile of the domesticated plants. (Paraphrased from Anthony N. Rose, 1960)

Contents 1. Introduction 2. Saccharomyces cereuisiae and other yeasts for bioethanol production 3. Enzymes 4. Kluyueromyces marxianus and related species 5. Candida utilis for animal feed (fodder) 6. Bioconversions 7. Flavor compounds 8. Yeasts capable of growing on hydrocarbons 9. Methanol-utilizing yeasts 10. Phaffia rhodozyma 11. Riboflavin-producing yeasts and yeastlike organisms 12. Citric acid-producing yeasts 13. Extracellular polysaccharide-producing yeasts 14. Additional applications 15. Yeasts as hosts for expression of recombinant DNA 16. Improvement of yeasts by mutation, protoplast fusion and recombinant DNA methodology 17. Yeasts as plant pathogens 18. Biological control of post-harvest diseases of fruits and grains 19. Food and beverage spoilage yeasts

Yeasts are producers of the four leading fermentation products in terms of tons/year worldwide. These are 13 beer (60 million tons), wine (30 million tons), single cell 13 protein and fodder (800000 tons), baker's yeast (600000 14 tons). A fifth product is citric acid (500 000 tons) which 14 is made by yeasts and molds.

14 14 14 15 15 15 16 16 16 16 16

2. Saccharomyces cerevisiae and other yeasts for bioethanol production This group is represented by numerous strains that were chosen and adapted for specific industrial fermentations. They include baker's yeast (different strains for compressed and active dry yeast), wine yeasts (including special flocculent strains for the production of champagne and film-forming strains for the production of flor sherry), sake yeast, top and bottom fermenting brewing strains (varying in the degree of flocculation occurring during fermentation), and distiller's strains used for alcohol production from cereal starch. Strain improvement by genetic manipulation and protoplast fusion has contributed superior strains for the above processes. About two million tons of yeast are produced for the distilling, brewing and baking industries each year. The production of beverage alcohol is restricted to the use of microorganisms (e.g., yeast) but that of industrial and fuel alcohol was usually carried out by chemical synthesis from petroleum. This has changed in favor of yeasts. For example, in 1977, yeast production of beverage, industrial and fuel alcohol was 20% less than by chemical synthesis. By 1984, yeasts provided 87% more ethanol than did chemical synthesis. The percentage of total alcohol made by yeasts from sugars and starch has continued to increase. Although hydrolyzates of plant materials such as cellulose and hemicellulose contain sugars not utilizable by S. cerevisiae, other yeasts such as Candida lusitaniae and Pachysolen tannophilus can convert cellobiose and xylose, respectively, to ethanol. Inulin from Jerusalem artichokes can be fermented to ethanol in concentrations of 5-7% v/v by Kluyueromyces marxianus (synonyms K fragilis, Candida kefyr, C pseudotropicalis, C macedoniensis), Torulaspora delbrueckii (synonym Saccharomyces fermentati), Debaryomyces occidentalis

17 18 18 18

1. Introduction Yeasts are used in many industrial processes, such as the production of alcoholic beverages, biomass (baker's, food, and fodder yeasts), and various metaboHc products. The last category includes enzymes, vitamins, capsular polysaccharides, carotenoids, polyhydric alcohols, lipids, glycolipids, citric acid, ethanol, carbon dioxide, and compounds synthesized by the introduction of recombinant DNA into yeasts. Some of these products are produced commercially while others are potentially valuable in biotechnology. Some uses of yeasts in the food, beverage and fermentation industries (Jacobson and Jolly 1989) are shown in Table 3. The present review focuses on yeast species with current or potential value in biotechnology. The use of yeasts dates back to ancient days. Before 7000 BC, beer was produced in Sumeria. Wine was made in Assyria in 3500 BC and ancient Rome had over 250 bakeries which were making leavened bread by 100 BC. Milk has been made into Kefyr and Koumiss using Kluyueromyces species in Asia for many centuries. 13

14

//. Importance of yeasts Table 3 Some present and potential uses of yeasts in the food, beverage and fermentation industries

Application

Yeast

Ale fermentation

Saccharomyces

Bread and dough leavening

S. cerevisiae, Saccharomyces exiguus, "Saccharomyces

D-Arabitol (sweetener)

Candida diddensiae

cerevisiae

Emulsifier

Candida lipolytica

Ethanol fermentation

S. cerevisiae

Fish and poultry feeds (astaxanthin)

Phaffia rhodozyma

Fodder and single cell protein

Candida utilis

Lactose and milk fermentation

Candida pseudotropicalis,

Lager beer fermentation

"Saccharomyces carlsbergensis " (= S. pastorianus)

Mannitol (humectant)

"Torulopsis mannitofaciens "

Shoyu, Miso

Zygosaccharomyces

Wine fermentation

S. cerevisiae

rosei"

"Kluyveromyces fragilis", Kluyveromyces

lactis

rouxii

Xylitol (sweetener)

"Torulopsis Candida "

D-Xylose fermentation

Candida shehatae, Pachysolen tannophilus, Pichia stipitis, Pichia segobiensis

(Schwanniomyces castellii) and Torulopsis colliculosa (= Torulaspora delbrueckii) (Guiraud et al. 1982). 3. Enzymes Certain yeast enzymes have been extremely useful in industry. These include invertase from K. marxianus, Saccharomyces carlsbergensis (=S. pastorianus) and S. cerevisiae for candy and jam manufacture, (3-galactosidase (lactase) from K. marxianus or K. lactis for production of syrups from milk or whey, and a-galactosidase from S. pastorianus for crystallization of beet sugar. Inulinase from various yeasts has the capability to produce fructose in high concentration from inulin in Jerusalem artichokes and chicory. 4. Kluyveromyces marxianus and related species Several species of the genus Kluyveromyces are good lactose fermenters and are therefore useful in alcohol production from milk whey, an abundant byproduct of the cheese industry (Moulin and Galzy 1981, O'Leary et al. 1977). DNA hybridization experiments (Fuson et al. 1987) among the species recognized by van der Walt (1970c) have shown that DNAs from the type strains of K fragilis, K bulgaricus, K cicerisporus, and K wikenii exhibit between 90-100% complementarity with K marxianus DNA. All are therefore synonyms of K marxianus, which has priority. However, the lactosefermenting ability of the strains varies from absent to strong, with "K. fragilis'' strains (or its anamorph Candida pseudotropicalis) giving the strongest fermentation and thus being the most useful in whey fermentations. 5. Candida utilis for animal feed (fodder) C utilis is the most widely used species for the production

of feed yeast in animal diets. Its ability to grow on cheap substrates, not suitable for most other yeasts, has made it the organism of choice for this purpose. C utilis requires no added vitamins, can utilize ammonium or nitrate nitrogen, can utilize many carbon sources (including cellobiose and D-xylose), and grows at 37°C. Crude substrates, such as sulfite waste liquor (a byproduct of the paper industry) and wood hydrolyzate, are used for its propagation. C. utilis was formerly known as Torulopsis utilis, and the product is sometimes referred to as Torula yeast. The sexual state is known as Pichia (Hansenula) jadinii (Kurtzman et al. 1979, Manachini 1979). 6. Bioconversions Yeasts can be used for a number of bioconversions (De Mot and Verachtert 1984). These include ketoreduction, oxidation of hydroxyl groups, ester hydrolysis and hydrogenation of double bonds in steroids; conversion of alkaloids and xenobiotics; L-lysine production from Laminocaprolactam; L-phenylalanine from ^raw^-cinnamic acid; conversions of w-tetradecene to 1-tetradecene, and phenol degradation. 7. Flavor compounds A number of yeast products are useful in the flavor industry. Ethyl acetate and acetaldehyde are produced by C. utilis. Acetaldehyde is also formed by film yeast in the production of Spanish flor sherry (Phaff and Amerine 1979). Esters and other volatiles are made by K lactis and monoterpenes are formed by Ambrosiozyma monospora. Terpenes and lactones are produced by K lactis, Torulaspora delbrueckii and Sporobolomyces odorus (Drawert and Berger 1984). Citric acid, an acidulant which is also used by flavor companies, is made by various yeasts (see below) as well as the mold Aspergillus niger

3. The industrial and agricultural significance of yeasts / A.L. Demain et al.

8. Yeasts capable of growing on hydrocarbons A large number of yeast species are currently recognized for their ability to utilize hydrocarbons as sole sources of carbon and energy Bos and de Bruyn (1973) listed 114 species and varieties of hydrocarbon-assimilating yeasts. Some of these have since been reduced to synonymy with other species. Species are found in the genera Candida, Debaryomyces (including Schwanniomyces and Wingea), Lodderomyces, Clavispora, Metschnikowia, Pichia, Stephanoascus, and Yarrowia\ basidiomycetous species are in genera Leucosporidium, Rhodosporidium, Sporidiobolus, Sporobolomyces, Rhodotorula, and Trichosporon. All hydrocarbon-utilizing yeasts appear to have coenzyme Q-9 (Co Q-9) in the respiratory chain, but the reverse is not necessarily true, i.e., some yeasts with Co Q-9 do not assimilate hydrocarbons. No species of Saccharomyces and Kluyveromyces, all of which have Co Q-6, grow on hydrocarbons. Only straight-chain hydrocarbons («-alkanes or w-alkenes) are utilized and those with 10-18 carbons are superior to those with shorter or longer chains. The rate of growth on hydrocarbons varies greatly. Candida maltosa (syn. Candida cloacae, Candida subtropicalis) (Meyer et al. 1975), C. lipolytica (sexual state = Yarrowia lipolytica), and Candida tropicalis (with many synonyms) (Barnett et al. 1990, Meyer et al. 1984, and the current volume) are among the best hydrocarbon utilizers. The metabolism of hydrocarbons by yeasts and the cell organelles involved has been reviewed briefly by Phaff (1985). The biotechnology industry has spent much money and effort in developing an economically feasible process for the production of single cell protein (SCP) from yeasts grown on w-alkanes (Tannenbaum and Wang 1975, Tuse 1984), but the industry experienced many disappointments. Thus SCP from hydrocarbons has virtually disappeared, partly due to economic factors, but mainly to failure to obtain approval for marketing the product from public health officials in some countries (Chen and Peppier 1978, Tuse 1984). Hydrocarbon-utilizing yeasts also play a significant role in the microbial oxidation of oil spills on land and in aquatic environments. lizuka and coworkers (lizuka and Goto 1965, lizuka and Komagata 1965) described the microflora found in oil fields and oil brines in Japan, which included several hydrocarbonoclastic strains. Turner and Ahearn (1970) reported that hydrocarbon-utilizing yeasts increased more than 1000-fold after a spill of waste oils into a watershed pond. Bartha and Atlas (1977) reviewed in detail the role of microorganisms in stimulating biodegradation of aquatic oil spills, especially with help from dispersants to make the oil more accessible to microbial attack. 9. Methanol-utilizing yeasts After the discovery in 1969 that some yeast species can grow on methanol (Ogata et al. 1969), interest in using methanol as a pure, water-miscible, and relatively

15

inexpensive substrate for the production of SCP (Cooney and Levine 1975, Tuse 1984) increased rapidly. The metabolism of methanol by yeasts is different from that in bacteria, and its pathway has been elucidated by Quayle and coworkers (see Phaff 1985). Sahm (1977) listed several processes for the production of certain amino acids, citric acid, a-ketoglutarate, and hypoxanthine by methylotrophic yeasts. He reported that approximately 26 yeast species are known for their ability to grow on methanol as the sole carbon source. Some of these have been reduced to synonymy with other species and some more recently discovered species have been added (Barnett et al. 1990, and the current volume). 10. Phaffia rhodozyma This pigmented, fermentative species has potential in biotechnology because its carotenoids are mainly astaxanthin (Andrewes et al. 1976), a pigment that is also responsible for the orange to pink color of salmonid flesh and the reddish color of boiled crustacean shells. Feeding of pen-reared salmonids with a diet containing this yeast induces pigmentation of the white muscle (Johnson et al. 1977, 1980b). Fish absorb the pigment better from cells that are mechanically disrupted than from intact cells (Tangeras and Slinde 1994). Enzymatic digestion of the cell wall of P. rhodozyma with a commercial multicomponent enzyme Novozym^^234 from Trichoderma harzianum or with a p-glucanase complex from Bacillus circulans WL-12, greatly improves the extractibility and availability of the carotenoid in the diet of salmonids (Johnson et al. 1978, 1979, 1980b, Okagbue and Lewis 1983, Tangeras and Slinde 1994). Laying hens deposit astaxanthin in egg yolks when fed broken P rhodozyma cells in their diet, but not with intact cells (Johnson et al. 1980a). One problem with P rhodozyma as a source of astaxanthin (as compared to synthetic astaxanthin) is its low pigment content in wild-type strains (^350 |ig/g). Johnson and coworkers were able to raise the astaxanthin content of P rhodozyma by a series of mutagenic treatments with antimycin A, resulting in yeast strains containing ~1500|uig of astaxanthin/g of yeast (An et al. 1989, 1991). Currently, at least two commercial companies have produced mutants of P rhodozyma with astaxanthin contents of more than 3000 \\.glg (Sanderson and Jolly 1994, Anonymous 1994). At this level of pigment content, the yeast-derived astaxanthin appears to be economically competitive with the synthetic product, which became available in 1984. Cultural conditions for P rhodozyma are also important for highest astaxanthin titers. A low substrate concentration (<1.5%) throughout the growth cycle using the fed-batch technique and highly aerobic conditions are essential. Temperature for growth must be maintained at ~22°C (maximum growth temperature = 25-26''C) at which the doubling time is 4-5 h (Tangeras and Slinde 1994). Molasses appears to be an excellent

16

//. Importance of yeasts

substrate for growth. The use of cellobiose as a carbon source also gave high astaxanthin yields in a wild-type strain (Johnson and Lewis 1979), but is uneconomical compared to molasses.

is due in part to their differential stability and physical behavior in solution. Several species of the genus Pichia (Hansenula) produce copious quantities of extracellular phosphomannans (Slodki and Cadmus 1978) from glucose under aerobic conditions. A strain of/? capsulata is able to convert 4011. Riboflavin-producing yeasts and yeastlike 55% of the substrate into phosphomannans (Slodki and organisms Cadmus 1978). In spite of attractive viscosity and gel Riboflavin (vitamin B2) is not required for the growth of properties for possible use as food additives, application any yeast. All yeasts appear to produce enough riboflavin of these water-soluble gums has been hampered because to satisfy their growth requirements, but a few are of their sensitivity to salts, shear, and heat, as well as their natural overproducers of this vitamin. This tendency of instability at low pH (Kang and Cottrell 1979). uncontrolled synthesis of riboflavin was found primarily A second example is the production of the glucan in two species: Eremothecium (Ashbya) gossypii and pullulan by strains of the dimorphic yeastlike fungus Eremothecium ashbyi. Overproduction in natural strains Aureobasidium pullulans (syn. Pullularia pullulans) often of E. ashbyi was discovered by Guilliermond (1936) and referred to as "black yeasts". Typical pullulans are linear in E. gossypii by Wickerham et al. (1946a). During the polymers of predominantly repeating units of maltotriose stationary phase of growth, the vacuoles become yellowish connected by a-(l -^ 6)-bonds, with molecular weights but, in some vacuoles, rosettes of needle-shaped crystals ranging from 1x10^ to 4x10^ (Kang and Cottrell 1979). of riboflavin are observed. This has led to its long-time use The induced biosynthesis of pullulans has been reviewed for the industrial production of riboflavin in animal feed by Slodki and Cadmus (1978). Fermentation yields of formulae (Perlman 1979). Later, E. ashbyi was replaced pullulan from starch hydrolyzates in 10% concentration in industry by the more stable E. gossypii. The effects of are as high as 75%. Kang and Cottrell (1979) reviewed composition of growth media and strain modification by the proposed and patented applications of pullulans, mutation on riboflavin synthesis have been reviewed in dewhich include use as a flocculator of clay slimes in tail by Demain (1972). Recently, Kurtzman (1995) placed hydrometallurgical processes, in coating and packing A. gossypii in the genus Eremothecium based on ribosomal material for foodstuffs and pharmaceuticals, in adhesives, DNA sequence comparisons. Strains of Candida famata and in the manufacture of special fibers and fabrics. have been obtained which produce 20 g/liter of riboflavin by protoplast fusion and by mutations to resistance to the following: 2-deoxyglucose, ultraviolet, iron, the 14. Additional applications purine analogs tubercidin and 4-aminopyrazolo(3,4d) A number of additional activities carried out by yeasts pyrimidine, spent medium, and adenosine monophosphate may have industrial or environmental significance. These include degradation of paraquat and diquat by Lipomyces (Foster et al. 1992, Heefner et al. 1992, 1993). starkeyi, depolymerization of tannin extracts by Zygosaccharomyces (Saccharomyces) rouxii, ascorbic acid 12. Citric acid-producing yeasts production from galactose by Candida norvegensis, The discovery in the late 1960s that very high yields formation of a-carotene by Rhodotorula glutinis and Lof citric acid could be produced from «-alkanes by phenylalanine production by Rhodotorula rubra. Yarrowia lipolytica caused this yeast to be competitive with Aspergillus niger (see Kapoor et al. 1982 for 15. Yeasts as hosts for expression of literature on this subject). Phaff (1985) reviewed the recombinant DNA biochemistry and physiology of citric acid production by The introduction and expression of heterologous (foreign) Y. lipolytica. Later studies have shown that citric acid can genes in yeasts serves as an alternative to bacteria for also be produced from vegetable oils or glucose under the expression of foreign polypeptides. S. cerevisiae is aerobic conditions by Y. lipolytica, Candida zeylanoides, not ordinarily pathogenic to humans (see chapter 2) and and C citrica (Kapoor et al. 1982, Phaff 1985). thus foreign proteins synthesized in this yeast may be more acceptable in pharmaceuticals and in food products 13. Extracellular polysaccharide-producing yeasts for human consumption. Additional advantages that can A large number of microbial species produce extracellular be attributed to S. cerevisiae are: (i) the high stability polysaccharides that can be recovered from growth media of its cells; thus, there is little or no lysis under various (Kang and Cottrell 1979, Slodki and Cadmus 1978). Most adverse conditions of growth, (ii) Defined growth media of the polysaccharides that have found industrial applica- used for yeasts contain few extracellular protein species tions (e.g., xanthan gum) are produced by bacteria, but under ordinary growth conditions and provide good a few polymers from yeasts or yeastlike organisms have conditions for secretion studies and recovery of gene shown potential utility in foods or are used in industrial products of recombinant DNA. (iii) Yeasts, in contrast to processes. The attractiveness of microbial polysaccharides most bacteria, can glycosylate proteins. Glycosylation in

17

3. The industrial and agricultural significance of yeasts / A.L. Demain et al.

recombinant yeast of normally non-glycosylated bacterial proteins results in more stable proteins, (iv) S. cerevisiae has had a long history of use in industrial fermentations, (v) Yeasts are much more able than Escherichia coli to secrete heterologous proteins into the extracellular medium. The procedure is to insert a heterologous gene in a plasmid capable of replication and selection in yeasts. Also needed is a 5'-flanking DNA promoter sequence to increase transcription. These have been derived by various investigators from the 5'-flanking sequences of genes such as yeast alcohol dehydrogenase 1, yeast glyceraldehyde3P-dehydrogenase, 3-phosphoglycerate kinase, a-factor, or acid phosphatase. A transcription terminator must be present in the 3'-flanking fragment. To obtain relatively pure gene products, it is desirable that they are secreted into the growth medium by the yeast. It has been found that translocation of secretory proteins (such as yeast invertase and acid phosphatase) across the endoplasmic reticulum involves the recognition and cleavage of a hydrophobic amino-terminal extension, the so-called signal sequence. Schekman and Novick (1982) showed that the secretion pathways in yeasts and mammalian exocrine cells are similar. After translation of the preprotein at the endoplasmic reticulum, the signal peptide is removed after passage through the membrane, and the processed protein is then transported to the Golgi apparatus where vesicles are formed which transport the protein to the cytoplasmic membrane of the bud. Fusion of the vesicles with the membrane releases protein from the cell, either in the periplasmic space of the cell envelope or into the medium. Because of the ubiquitous nature of the signal sequences in different eukaryotic secretory proteins, yeast enzymes involved in the processing and secretion have been found to work also with foreign gene products. A large number of heterologous proteins are secreted by yeasts using the yeast mating factor (MFal) signal sequence, i.e., the prepro-a-factor directed system. The following are examples of some heterologous genes cloned in S. cerevisiae and secreted by the recombinant yeast: human interferons (Hitzeman et al. 1982, 1983), wheat a-amylase (Rothstein et al. 1984), human epidermal growth factor (Brake et al. 1984), human interleukin-a, calcitonin, human growth hormone-releasing factor, human serum albumin, human insulin-like growth factors, prochymosin, insulin and somatostatin (Brake et al. 1984). Human interferon-y is produced at 5-10% of total cell protein (Egan and Bitter 1984) and human hemoglobin continuing endogenous heme at 2 - 3 % of total protein (Wagenbach et al. 1991). Human superoxide dismutase is made in stationary phase cells at a remarkable level: 70% of total cell protein (Hallewell et al. 1987). The sweet-tasting plant protein thaumatin is synthesized in yeast with plasmids encoding preprothaumatin (Edens et al. 1984). Although the signal sequence was found to be indispensable for thaumatin synthesis in yeast, the protein (which is about 2000 times sweeter than sucrose on

a weight basis) was not secreted into the growth medium. Similarly chymosin, a proteinase found in the fourth stomach of unweaned calves and used commercially in the first stages of cheese making, is not secreted by S. cerevisiae carrying the cloned genes of the various forms of this protease (Mellor et al. 1983). The zymogen, prochymosin, is inactive but becomes activated by an autocatalytic process at low pH. Calf prochymosin was synthesized to over 5% of total yeast cell protein. Bacterial proteins have also been synthesized and processed in yeast as exemplified by |3-lactamase (Breunig et al. 1982) and the E. coli outer membrane protein A (Janowicz et al. 1982). The most important commercial yeast recombinant process has been the incorporation of the genes encoding surface antigens of the hepatitis B virus resulting in the first safe hepatitis B vaccine (Wilson 1984). The methylotrophic yeasts, Pichia pastoris and Pichia angusta (Hansenula polymorpha), have some advantages over S. cerevisiae as hosts for heterologous genes, (i) These yeasts can be grown at extremely high cell densities (100-130 g dry weight per liter) in proteinfree media, (ii) They have a higher level of protein productivity, (iii) In contrast to hyperglycosylation by S. cerevisiae, the methanol-utilizing yeasts do not overglycosylate. (iv) Foreign genes are incorporated in multiple copies into the chromosomes of methylotrophic yeasts, (v) The levels of production by these yeasts are relatively high (Table 4). The P. pastoris system (Brierly et al. 1990) employs a methanol-regulated alcohol oxidase gene promoter which yields alcohol oxidase at 30% of soluble protein. The expression cassette is stably integrated into the host genome at specific locations. The organism is haploid and amenable to traditional mutagenesis. Table 4 Recombinant proteins produced by methylotrophic yeasts Protein

Level (g/1)

Bacterial streptokinase

0.3

Epidermal growth factor-like protein

0.5

Bovine lysozyme (secreted)

0.6

Hepatitis B surface antigen

1.0

Glucoamylase (secreted)

1.4

Hirudin (secreted)

1.5

S. cerevisiae invertase (secreted)

3.0

Tumor necrosis factor

10.0

16. Improvement of yeasts by mutation, protoplast fusion and recombinant DNA methodology Because of the conservatism of the food industry, many improvements in yeasts via construction of new strains by recombinant DNA methods (see below) have not yet been commercialized. However, mutation and protoplast fusion methods have been used to transfer genetic characteristics because this methodology does not come under

18

//. Importance of yeasts

the heading of recombinant DNA techniques. Mutation of Saccharomyces diastaticus {= amylolytic strains of S. cerevisiae) to 2-deoxyglucose resistance resulted in increased rates of wort fermentation and unchanged beer flavor (Stewart et al. 1985). Mutation of Candida boidinii to ethionine-resistance increased methionine content from 0.5-9 mg/g dry cells in the intracellular amino acid pool and from 6-16 mg/g in the cells themselves (Tani et al. 1988). Some of the genetic characters transferred from one yeast to another by protoplast fusion are (i) osmotolerance (from osmotolerant yeasts to the food yeasts S. cerevisiae and ''S. diastaticus'', (ii) flocculation (Panchal et al. 1982), (iii) lactose utilization (Farahnak et al. 1986), (iv) the "killer" character (Bortol et al. 1986), (v) cellobiose utilization (Pina et al. 1986), and (vi) methionine overproduction (Brigidi et al. 1988). With regard to recombinant DNA techniques, the endoglucanase gene has been transferred from the mold Trichoderma reesei into brewer's yeast for hydrolysis of barley (3-glucans, thus decreasing haze in beer and improving filtrability (Penttila et al. 1987). Brewer's yeast has also been the recipient of the amyloglucosidase gene from Aspergillus niger for hydrolysis of unfermentable dextrins in production of light beer (Hammond 1988). The same gene from Aspergillus awamori (Cole et al. 1988) and the mouse pancreatic a-amylase gene have been incorporated into distiller's yeast allowing ethanol production directly from starch. Brewer's yeast containing the a-acetolactate decarboxylase gene from Enterobacter aerogenes no longer makes diacetyl and produces beer with a markedly reduced maturation time (Sone et al. 1988). Lower acidity and enhanced flavor in wine has been achieved by transformation of wine yeast with the gene encoding the malolactic conversion enzyme from Lactobacillus delbrueckii. Plant a-galactosidase, introduced into S. cerevisiae, allows the yeast to modify guar gum to achieve the desireable properties of locust bean gum. In 1990, a recombinant baker's yeast containing heterologous genes encoding melibiase and maltose permease was approved in the U.K. for breadmaking but has not yet been used, presumably due to fear of consumer response. 17. Yeasts as plant pathogens Yeasts are generally not known to be plant pathogens, but members of the genus Eremothecium (synonyms Ashbya, Holleya, Nematospora) are exceptions. As discussed earlier, two species of this genus, E. ashbyi and E. gossypii, are used for commercial production of the vitamin riboflavin. Batra (1973) provided a thorough review of the host range for many of the Eremotheciaceae and it was noted that infections are usually insect-vectored. Eremothecium cymbalariae, E. ashbyi and E. gossypii commonly infect cotton (Gossypium spp.) as well as the fruits of Citrus spp. Infections often take the form

of surface lesions, especially on fruits, but the fibers from infected cotton bolls may show yellow discoloration as well. Other economically important plants that are infected by these three species include coffee {Coffea spp.) and Hibiscus spp. Eremothecium coryli has a wider host range than the preceding species and commonly infects cotton, tomato (Lycopersicum esculentum Mill), Citrus spp., soybean (Glycine max (L.) Merr.) and hazel nuts (Corylus avellana L.). In contrast, infections caused by E. sinecaudii are restricted to seeds of oriental mustard (Brassica juncea (L.) Coss.) and yellow mustard (B. hirta Moench) (Holley et al. 1984). 18. Biological control of post-harvest diseases of fruits and grains Rotting of stored fruits, vegetables, and grains following harvest represents a significant loss to agriculture, but control of rotting through chemical treatment may introduce health and environmental risks. An alternate strategy to prevent fiingal decay relies on surface treatment of stored crops with bacteria and yeasts antagonistic to fungi (Wilson and Wisniewski 1989). Yeasts are favored over bacteria because they do not produce antibiotics and they are perceived as less likely to cause human disease when consumed. Droby et al. (1989) and Chalutz and Wilson (1990) reported that citrus fruits treated with a strain of Debaryomyces hansenii, which was reidentified as Pichia guilliermondii (McLaughlin et al. 1990), were protected from common mold-induced rots. Protection appeared to result from competition for nutrients because P. guilliermondii did not inhibit the molds (Penicillium digitatum (Pers. ex Fr.) Sacc. and P. italicum Wehmer) when it was cocultivated with them on laboratory media or when the molds were exposed to filter-sterilized media following growth ofP guilliermondii. Similar results were obtained by Roberts (1990), who reported control of gray mold (Botrytis cinerea Pers. ex Pers.) disease of apples following treatment with living cultures of Cryptococcus laurentii. The use of yeasts to prevent molding of stored grains shows some promise. Paster et al. (1993) demonstrated that growth of Aspergillus Jiavus Link:Fr. on soybeans was significantly inhibited when the seeds were coinoculated with Pichia guilliermondii. Bjornberg and Schniirer (1993) showed Pichia anomala to inhibit the grain storage molds Penicillium roqueforti Thom and Aspergillus candidus Link when grown together on laboratory media. Inhibition apparently did not result from competition for nutrients. 19. Food and beverage spoilage yeasts Spoilage of foods and beverages from growth of contaminating yeasts results in major economic losses worldwide. The extensive literature on this subject precludes a thorough treatment in this book. Further information can

3. The industrial and agricultural significance of yeasts / A.L. Demain et al.

be found in Phaff et al. (1978a, pp. 224-237), Pitt and Hocking (1985), and Fleet (1990). Briefly, undesirable changes caused by yeasts in fresh and processed foods, or during and after their fermentation, may consist of pellicles or turbidity in liquid products or as a slimy or powdery coating on solid products, causing the formation of off-odors and flavors. Species responsible for food spoilage are not known to cause food poisoning as is the case with certain bacteria. Yeasts responsible for food spoilage are usually welldefined and even predictable species, which depend on the chemical composition of the product, its pH, temperature of storage and the presence or absence of oxygen. Improperly cleaned processing equipment is often the source of contamination. Yeasts occurring in products with a high sugar content (40-70% by weight) grow slowly, especially at the higher concentrations, and are usually represented by species of the genus Zygosaccharomyces or by Torulaspora delbrueckii, Schizosaccharomyces octosporus, Pichia subpelliculosa and a few other species. If a high osmotic pressure is created by the addition of NaCl as a preservative, different yeast species

19

develop, depending on the salt concentration. During the lactic acid fermentation of Spanish style olives, the salt concentration is - 6 . 5 % and Pichia membranifaciens and other Pichia species predominate. During the fermentation of cucumbers (salt concentration 10-16%), Candida etchellsii, C. versatilis and some other species develop. The highest salt concentration (to nearly saturation) favors the development of species of the genus Debaryomyces, which are found in aged cheeses, dry salami and similar meat products. Spoilage of fresh fruits (e.g., grapes, pears, tomatoes) is commonly caused by Candida stellata, Pichia kluyveri, P fermentans, Metschnikowia pulcherrima and species of Hanseniaspora and its anamorph Kloeckera. Species of Brettanomyces (sexual state Dekkera) may cause turbidity and off-flavors in wines, beer, and soft drinks. Yeasts associated with dairy products are usually endowed with lactase activity {Kluyveromyces marxianus, K. lactis, as well as some Rhodotorula species). Yeasts with lipolytic enzymes (Yarrowia lipolytica, Candida oleophila) are found in triglyceride emulsions (e.g., olive pulp), while those containing amylases (species of Saccharomycopsis) can cause spoilage of starchy foods.

This Page Intentionally Left Blank

Chapter 4

Ecology and yeasts Marc-Andre Lachance and William T. Starmer a different time scale. Whereas evolutionary responses involve changes in gene frequencies over generations, ecological adaptation may occur repeatedly during the life of an organism and does not usually involve changes in the genotype of that organism. At the interface of these two sciences, evolutionary ecology examines the interaction between the genetic profile of organisms as members of communities interacting with their environment. This relatively new approach had its first major manifestation in yeast ecology when a multidisciplinary congregation of researchers combined efforts to examine the interdependence of cacti, yeasts, and drosophilids. The early results of this research were brought together in a monograph by Barker and Starmer (1982). Because the impact of human activity on nature is overwhelming, yeast ecology can be of economic or political importance. Often overlooked in the past was the potential role of yeasts in environmental ecology, specifically as agents of pollution, bioremediation, or biological pest control. Of course, some yeasts are well known as the central components of some industrial processes, which may in fact constitute complex microbial ecosystems. The theoretical framework underlying the selection of industrial yeast strains from the standpoint of known or presumed selective forces acting upon yeasts in nature has been dealt with by Lachance (1990b). This chapter, rather than paraphrasing the publications cited above, will focus on yeast ecology in general as an art and a science, on its possible fiiture developments, and on some connected topics of current interest.

Contents 1. 2. 3. 4. 5. 6. 7. 8. 9. 10.

Introduction Taxonomic descriptions are the basis for yeast ecology Yeast community, niche, or habitat: some definitions Yeasts in the food chain Characterizing yeast communities Molecular ecology Ecological aspects of yeast sexuality Clinical ecology and the yeast connection Yeasts as probiotics Yeasts and microbial ecology

21 21 22 24 25 27 27 28 29 29

1. Introduction Louis Pasteur, Emil Christian Hansen and Martinus Beijerinck figure prominently among early students of yeast ecology. Although educated as a chemist, Pasteur was thefirstto put forward the notion that microorganisms are essential in the global turnover of living matter, and that yeasts are necessary components of the microbiota of fermenting wine or beer by effecting the conversion of sugar to ethanol. According to Dubos (1976), Pasteur's ecological thinking was a major determinant of the success of his endeavors. Hansen, recognized as the founder of yeast systematics, provided the first insights on the distribution of yeasts in their natural habitats (Phaff et al. 1978a). Beijerinck described his own work as "microbial ecology", years before the coming of age of that science (van Iterson et al. 1940). Better known for his creative uses of bacterial enrichment techniques and his studies of geochemical cycling, Beijerinck also made important contributions to yeast ecology, including studies on the resistance of yeast ascospores to physical stresses, and the application of this phenomenon to the isolation of yeasts from soil samples. Because ecology is the study of any aspect of organisms in the context of their environment, all investigations of yeast morphology, physiology, or genetics, be they descriptive or predictive, may be spiced with an ecological flavor. Yeast ecology has, therefore, progressed largely in parallel with the development of studies of yeast taxonomy and physiology by workers who may not have viewed themselves as ecologists. Many aspects of these developments have been reviewed comprehensively by Phaff et al. (1978a) and by various contributors to volumes 1 and 2 of Rose and Harrison's (1987) treatise. Ecology often addresses the study of life from many of the same perspectives as evolutionary biology, but on

2. Taxonomic descriptions are the basis for yeast ecology As Phaff et al. (1978a) stated in conclusion to a general discussion of yeast ecology, "we are convinced that imaginative research by yeast ecologists will lead to the discovery of many additional interesting associations and the isolation of novel yeast species." This prophetic view has been substantiated by the spectacular growth in the number of known yeast species from 341 in Lodder's 1970 edition of The Yeasts, a Taxonomic Study to 597 in the 1990 monograph of Barnett et al. (1990), in spite of the substantial number of synonymies elucidated by molecular taxonomists in the interval. Unfortunately too many times in the past, workers engaged in yeast isolation have not gone beyond the mere nomenclatural description of new 21

22

//. Importance of yeasts

species, failing to typify also their community, habitat, and possible interactions. A significant number of species listed in taxonomic monographs are known only through a single strain whose origin is vaguely described. In view of the rapid decline of many natural habitats due to urban and industrial development of the few remaining wilderness areas worldwide, the need to search for new yeasts is pressing. The urgency of the problem as it applies to all forms of life has been expressed by E.O. Wilson: "I think a world biological survey would do more for humanity during the next 20 years than the genome mapping project" (Horgan 1994). The increased awareness, among world leaders, of the importance of documenting biodiversity allows one to be filled with optimism about the fixture of taxonomic research. However, it is vital that new taxonomic surveys be couched in an ecological framework, and that isolation methods be devised to yield ecological insights. The alternative is a meaningless catalogue of names, devoid of any real biological relevance. A tangible risk exists that such an inventory could even be used as an excuse to justify fiirther destruction of natural habitat. 3. Yeast community, niche, or habitat: some definitions Yeasts do not occur randomly throughout the biosphere. They form communities of species. Each community may be defined by its habitat, which is the actual place where an assemblage of yeasts lives, and by the niches of its component species. The niche consists of the attributes that make a yeast capable of sharing a habitat with other members of the community. The niche is thus the sum of all physical, chemical, or biotic factors required for successfiil existence. The members of a community may have different niches that happen to overlap in a given habitat. It is important to distinguish, among species found in a habitat, those that are essential components of the community from those that are transient or present fortuitously. The former are termed autochthonous, and the latter allochthonous. In practical terms, when evidence exists that particular yeast species actually grow regularly in a substrate, the species may be considered autochthonous members of a community. If that substrate repeatedly yields the same small array of species, it is considered to be a highly specific habitat. Likewise, yeast species endowed with a broad niche and as a consequence occupy many habitats are regarded as generalists. Other yeasts only occur in very unique habitats, and thus are considered specialists. It goes without saying that the one time observation of a yeast species in a substrate does not allow one to draw any such conclusions. 3.1. The yeast niche By their very nature, yeasts are generally limited in the range of habitats they can occupy. In addition to many mineral nutrients that serve as building blocks for most of

their cell constituents, yeasts require significant amounts of an organic source of carbon and energy of relatively small molecular weight. The high surface/volume ratio of yeasts favors rapid nutrient absorption. Their unicellular nature often makes them better suited for deep liquid substrates or moist and uneven surfaces, unlike molds, which form hyphae that can penetrate and liquefy semisolid substrates or spread over smooth, inert surfaces. The size and shape of yeast cells may be a major factor in the ease and selectivity with which they are vectored by certain insects, and the volatiles that they produce may serve as specific attractants. Yeasts usually grow over a broad range of pH values, allowing them in particular to colonize materials that have already been the site of fermentative activities by bacteria. Conversely, yeasts are not truly thermophilic. A maximum growth temperature of 46-48°C is observed in the intestinal species Arxiozyma (Saccharomyces) telluris and related taxa (Watson 1987). Some yeasts (e.g., Pichia and Debaryomyces spp.) possess hydrophobic wall components that cause them to form a film at the surface of liquids, while others (e.g., Saccharomyces or Hanseniaspora spp.) may have the ability to form dense floes. These features define the niche of yeasts, and in turn allow us to predict that yeast habitats will most often be rich in simple organic carbon, liquid or very high in moisture, acidic or occasionally alkaline, and nutritionally complex. Such conditions are met by plant tissue undergoing various forms of decay, as well as exudates of roots, leaves, or flowers. Some yeasts may be better adapted to conditions met in association with the body of certain animals, usually acting as intestinal commensals. It is useful to distinguish between the intrinsic attributes that affect the potential distribution of yeasts from the sum of all factors that actually determine their effective distribution. The terms fundamental versus realized niche are used to specify those two aspects of the niche (McNaughton and Wolf 1979). Although one generally expects the two to go hand in hand, Starmer (1981a) deduced a negative correlation between the fundamental and realized niches of certain cactophilic yeasts, based on the observation that some nutritionally specialized species had a broader host range than some nutritional generalists. The latter may be an exception. Cosmopolitan yeast species such as members of the genera Debaryomyces and Cryptococcus are most heterogeneous in their nutritional abilities, whereas yeasts that have predictable, specialized habitats, for example species of Saccharomyces, Pichia, or Hanseniaspora, exhibit narrower nutritional potentials. At the extreme, the yeast Cyniclomyces guttulatus possesses probably the narrowest known fimdamental niche, being defined by unusually stringent nutritional requirements and a limited range of growth temperatures and redox potentials. The realized niche of C guttulatus is fiarther restricted by the coprophagous behavior of its host, the rabbit.

4. Ecology and yeasts / M.-A. Lachance and W.T. Starmer

3.2. The yeast habitat Gams (1992) stated that saprophytic microfungi behave according to the principle that "everything is everywhere, the environment selects." He incidentally attributes the well-known phrase to Bass-Becking, and not to Beijerinck, as is thought by many (Atlas and Bartha 1993). Notwithstanding, a literal adhesion to this postulate could lead one to believe that with enough persistence, it might be possible to isolate any yeast almost anywhere. The opposite extreme would be to limit the search for yeasts entirely to known yeast habitats, with the consequence that many new species could be missed altogether. Between these two absurd positions, the middle ground is the conduct of taxonomic studies within an ecologically sensible framework. The discovery of new yeast habitats may be serendipitous in some cases and guided by previous knowledge in others. Regardless, once yeast populations have been located for study, an effort should be made to identify their actual habitat, which in turn will generate an appreciation for the actual community. For example, many yeasts found in the sea may not always be autochthonous components of a seawater community. A search for the primary habitat, although not easily accomplished, is desirable. Many new yeast species, some of which are represented by a single strain, have been recovered from soil after some kind of selective treatment to eliminate molds and bacteria. Since soil is the ultimate repository of all life forms, any effort aimed at testing whether soil isolates are in fact autochthonous to soil would be worthwhile. 3.2.1. Aquatic habitats: Fresh and estuarine waters are difficult to characterize as specific yeast habitats, given that their microbiology is highly affected by the surrounding terrestrial fauna and flora, soil run-off, or effluents of human sources. In their review of this topic, Hagler and Ahearn (1987) noted the predominance, in fresh water habitats, of yeasts normally considered ubiquitous or associated with pollution. Vincent (1988) noted that the basidiomycetous yeasts recovered in Antarctic lakes were clearly the result of wash-in from adjacent soils. Moreover, polar soil yeasts, which occur in significant numbers, were found mostly in soil samples that "also contained moss, lichen or microalgal material". The reported isolations would gain a more profound significance if the actual yeast habitats were identified at the source. Sieburth (1979) observed that yeasts are the dominant fungi in the oceans, although they are outnumbered by bacteria. Whereas basidiomycetes appear ubiquitous, ascomycetous yeasts seem more responsive to the concentration of organic debris. Among ascomycetes, the generalistic Debaryomyces species abound, specially near shores. Also frequently isolated are Metschnikowia species known to be associated primarily with marine invertebrates such as calanoid copepods, with fish, or with algae (Fell 1976). Up until recently, Kluyveromyces aestuarii had been isolated exclusively, albeit sporadically,

23

from the sea. This was of interest, because (according to our laboratory records) that species is significantly more resistant to sodium chloride than other members of the genus. Recent work by Hagler's group (de Araujo et al. 1995) has demonstrated the abundance of K. aestuarii in crabs, which could account entirely for its scattered occurrence in the sea. The mostly psychrophilic Leucosporidium spp., Rhodosporidium spp., Candida austromarina, Candida natalensis, and Sympodiomyces parvus are probably autochthonous marine species, since they are recovered at relatively high cell concentrations from open ocean samples in specific circumpolar locations (Fell 1976). These are not usually isolated elsewhere. According to Fell (1976), marine yeasts are best defined by their combined ability to survive for long periods in seawater and to utilize a broad array of carbon compounds. Differential responses to salt are not likely to be significant. Because this broad definition might also apply to many generalistic yeasts, it remains of interest to wonder if some yeasts are intrinsically marine by virtue of specific physiological characteristics, such as psychrophily. MacLeod (1965) defined marine bacteria as having a highly specific need for sodium cations, in some cases a requirement for halide ions, and a higher dependence on magnesium and calcium than terrestrial bacteria. He remarked that contrary to common belief, the halophily and psychrophily of many bacteria isolated in the sea were not genetically stable. The essential feature of marine bacteria is their ability not only to survive, but also to grow in the sea, which ostensibly involves complex physiological attributes. A large proportion of marine bacteria grow poorly if at all on laboratory media. Whether the same criteria can be extended to yeasts is questionable. Hagler and Ahearn (1987) remarked that dilute media such as water or soil extract agar are of no advantage in isolating yeasts of marine origin, unlike for many marine bacteria. As is the case for freshwater yeasts, many yeasts found in the sea may be allochthonous. Many are species of Rhodotorula or Sporobolomyces or other phylloplane genera (Hagler and Ahearn 1987) and thus marine isolates of these yeasts may originate from plant foliage. The frequent isolation of D. hansenii in seawater is consistent with its general ubiquity. Yeasts found both in the sea and in fresh water are most certainly allochthonous. They include Candida species thought to originate from fecal contamination, and some Cryptococcus species also found in soils and on plant surfaces. 3.2.2. Terrestrial habitats: Terrestrial yeasts are most abundant in plants, animals, and soil. This is a very broad topic which was reviewed extensively by Phaff and Starmer (1987), and so only a few special issues will be raised here. As mentioned above, the recognition of soil as a yeast habitat is problematic. In terms of overall abundance, it would appear that filamentous fiangi tend to outnumber yeasts in most soils (Gams 1992). Nonetheless,

24

//. Importance of yeasts

as outlined by Phaff and Starmer (1987), the existence of yeasts that are isolated repeatedly and exclusively from the soil, such as Lipomyces species, Debaryomyces (Schwanniomyces) occidentalis, Schizoblastosporion sp., and certain species of Cryptococcus suggests that some habitat specificity may be at play. Vishniac (1994) demonstrated that Cryptococcus albidus, a dominant soil organism, was capable of rapid growth when introduced into autoclaved soil, following which viability was retained for 2 months. She argued that the sterilization treatment altered the nutritional value of the soil in a manner similar to natural weathering factors. Consistent with this, the growth of indigenous soil yeasts would be a function of the frequency and intensity of disturbances in soil. Terrestrial ecosystems in general are the most amenable to studies of yeasts which participate in complex relationships with other organisms. Atlas and Bartha (1993) compiled an extensive list of possible community interactions as follows. Microbe-microbe interactions include neutralism (sparse independent populations sharing the same habitat), commensalism (a population benefits from the activity of another), synergism (cooperative modification of resources leading to close spatial relationships), mutualism or symbiosis (very strong synergistic association), competition (utilization of limited common resources), amensalism (chemical interference), predation (ingestion), and parasitism (long term destructive contact). Plantmicrobe interactions are defined by the terms rhizosphere and rhizoplane, mycorrhizae (mutualistic), phyllosphere and phylloplane, epiphytes, and pathogens. Animalmicrobe interactions encompass grazing, food enrichment, and epizoic relationships. Several of these have been documented in yeasts (Phaff and Starmer 1987). Some examples will be given below. Starmer et al. (1991) summarized the major factors that can shape complex yeast communities, using as an example the csiCtus-yQSiSt-Dwsophila system. The first factor, dispersal, can be highly specific as it may involve insects that feed only on certain cactus species. Drosophilids are grazers that inoculate specific yeasts into injured plants. The yeast community developing in the cactus phyllosphere may become fashioned by the action of toxic compounds present in the host tissue (plantmicrobe amensalism). Specifically, cacti in the genus Stenocereus produce saponins, some of which are toxic for many yeasts. Moreover, yeasts (and bacteria) already present in the host tissue may interact with newly introduced species (microbe-microbe interactions). In some cases, the interaction is mutualistic, and in others, it may involve competition for nutrients (Starmer and Fogleman 1986). Amensalism is also suspected in cases where species exclusion may be correlated with their reciprocal responses to killer toxins (Starmer et al. 1987). Last, the yeasts present in the resulting assemblage must provide sufficient benefits (food enrichment, detoxification) to the

vector for the latter to carry on further dispersal of the community to a new host. Evidence that killer toxins play an ecologically significant role as a form of amensalism involving different yeasts is still limited. Yeasts collected from decaying fruits are generally more likely to be killers than yeasts from other communities such as tree fluxes or cactus rots (Starmer et al. 1987). Cross-classification of yeasts from within and between communities demonstrated more killing activity between communities. This would suggest that yeasts within a community have adapted to their respective toxins, and that killer toxins may act to exclude yeasts from other communities. Moreover, Ganter and Starmer (1992) found that the killer activity of cactophilic yeasts was dependent on the geographic region, the host plant, and the habitat from which the yeasts were collected. Many naturally selected wine yeasts are killers (Young 1987). This phenomenon is widespread, but evidence that killer toxins actually serve as an instrument of competition between yeast strains in wine is only starting to accumulate (Carrau et al. 1993). Brewery contaminants capable of taking over from cultured strains and of causing bad flavors are usually killers, whereas nonkilling contaminants are of lesser consequence (Young 1987). Conversely, a recent study of a natural tequila fermentation suggests that killing is not a significant factor in the development of a stable yeast community in that case (Lachance 1994). Ultimately, the composition of a yeast community depends on the niche compatibility of its member species. Autochthonous components may interact together in a synergistic manner or cohabit in a neutral relationship due to resource partitioning. Non-members may be excluded by various forms of competition, or simply remain present, but as allochthonous elements due to the unsuitable nature of their fundamental niche. 4. Yeasts in the food chain The role of yeasts in geochemical cycling is probably negligible in comparison to that of bacteria. On the other hand, it is now quite clear that yeasts frequently fulfill an important role in the food chain. Insects not only feed on substrates known to serve as yeast habitats, but also exhibit several adaptations to yeast utilization as a feedstock. Since the beginning of the 20th century, yeasts have been recognized as important and essential components of drosophilid nutrition (Delcourt and Guyenot 1910, Baumberger 1919). In addition, the importance of yeasts may go well beyond mere nutrition. Recent research indicates that yeasts may affect drosophilids by (1) effecting the detoxification of chemicals that are harmful to larvae or adults (Starmer 1982b, Starmer et al. 1986), (2) producing cues used by larvae or adults to find food (Fogleman et al. 1981, 1982), (3) signalling the location of egg deposition sites (Vacek et al. 1985, Barker

4. Ecology and yeasts / M.-A. Lachance and W.T. Starmer

et al. 1986), (4) altering pheromones released by adults to attract mates (RJ. Bartelt, personal communication), and (5) influencing the behavior of adults during courtship and mating (Cook and Cook 1975, McRobert 1986, Starmer et al. 1988b). The principal function fulfilled by ascomycetous yeasts as insect food appears to be the conversion of mineral or other low complexity nitrogenous compounds to a rich mixture of proteins and other complex nutrients beneficial for the insects. It is less clear whether basidiomycetous yeasts occupy a similar position along the hierarchy of trophic levels. Clearly their utilization of phylloplane and cauloplane exudates could cause a nutritional enrichment of these habitats in favor of grazing invertebrates. In the sea, yeasts may serve as food for filter feeding animals. However, the amount of yeast biomass on plant surfaces or in the sea is presumably much lower than that found in the deeper layers of the phyllosphere. 5. Characterizing yeast communities 5.1. Yeast isolation Because yeasts hardly ever occur naturally as pure cultures, a balance must be struck between the wish to identify all components regardless of abundance and the need to recognize which components are most significant. In this respect, direct streak plating of suitably diluted substrate (with a calibrated loop) offers the advantage that it preserves the abundance ratios of different yeast types. YM agar is preferable to simpler formulations such as malt extract, which is poor in certain nutrients. We favor acidification to pH 3.7 over the addition of antibiotics to inhibit bacterial growth completely. Some laboratories opt for the incorporation of chloramphenicol (50-lOOmgr^). If interference occurs between fast and slow growing species on the same plate, selective agar media can be formulated, and the sample plated in replicate. Natural substrates that yield intractable mixtures of yeasts and molds that must be treated by selective filtration, with or without liquid enrichment, may not actually harbour a genuine community of autochthonous yeasts. In cases where they do, enrichment methods can and should be altered to yield a quantitative assessment of yeast occurrence (e.g., most probable number techniques). A search for the true habitat may be more productive, in the long run, than the devising of complex isolation procedures. The isolation of rare ascosporogenous yeasts in soil can be facilitated by the use of Beijerinck's enrichment (van Iterson et al. 1940), which consists of subjecting soil to gradual desiccation and heating, with periodic sampling and inoculation of the soil. It is not clear how the method could be modified to generate a sense of the community to which those yeasts belong. 5.2. Sample size Once a habitat has been identified and suitable methods designed, a collection scheme should be formulated to

25

yield sufficient numbers of samples. Sampling strategies have been the object of numerous publications in general ecology, but not in yeast ecology. We (Lachance and Starmer 1986) have determined empirically that a minimum of 15 independent samples is required to obtain an accurate reflection of community composition for cactus necroses, insects, tree exudates, or flowers. The number varies according to the frequency of empty samples. If empty samples are present, the sampling size should be corrected to obtain a minimum of 8 non-empty samples. Higher sampling intensities are sometimes useful if minor community components are sought. For example, the yeast Sporopachydermia quercuum occurs in low numbers (and presumably at low frequencies) in red oaks of the Great Lakes area. In an attempt to obtain a larger number of isolates to study variation (J.E. Kaden and M.A. Lachance, unpublished results), 50 trees were sampled and their exudates plated in duplicate on YM agar and Yeast Nitrogen Base agar with mjo-inositol as sole carbon source, plus lOmgl"^ cycloheximide. Only five separate isolates were obtained. At another locality, 20 trees were sampled and only one isolate was recovered. 5.3. Purification The art of picking colonies for further study is an important aspect of community description. The isolation plates should be examined daily until the colonies acquire a sufficient size to allow discriminating between the types. It is generally advantageous to use some kind of magnifying device. High power (4x) reading glasses are convenient and suitable. A representative of each colony type should be recovered, and the number of colonies of this type estimated. We have found httle advantage to picking replicates of each colony type unless the mating type ratios of a haploid heterothallic species are being investigated. The possibility that a species is missed because its colonies are identical to others is compensated by processing an adequate number of samples. Ideally, each colony should be immediately suspended in water and streaked out for purification. When this is not possible, colonies may be transferred directly to small (1-3 ml) agar slants and purified later. 5.4. Identification Yeast identification methods have been standardized to some degree since the keystone publication of Wickerham (1951). The details, however, vary from one laboratory to another. For ecological studies, we favor replica plating with a multipoint inoculator (see Lachance 1987, for a description) for several reasons. Many ecological insights emerge from examining numerous yeast strains for growth on the broadest possible variety of media, whether or not all media are required for species identification. The number of informative tests may approach 90, and a typical field study may yield over 300 isolates. Simple arithmetic will show how onerous is the task of conducting these tests in separate tubes. We inoculate 21 strains

26

//. Importance of yeasts

per plate. The preparation of enough media for 8 series of 90 media takes less than two days. One series requires about 2 hours to inoculate and 1 hour to read. Importantly, colony characteristics may vary from one medium to another, which may in itself constitute valuable information. Contamination is more easily detected on agar media than in broth. Special shaking equipment is not required. Replica plating has also some drawbacks such as cross-reactivity. For example, the urease hydrolysis test cannot be performed on replica plates, and tests for the assimilation of certain sugars (i.e., sucrose, rafhnose) are sometimes difficult to assess correctly. These weaknesses of replica plating are largely outweighed by the advantages. Complete identification of every isolate is essential. The use of simplified characterization procedures may be permissible in studies of already well characterized communities (Davenport 1980a), but in exploratory studies, "an accurate picture of yeast habitats cannot be assembled if the yeast species cannot be correctly identified" (PhaflF and Starmer 1980). As newer molecular identification methods develop, one can easily conceive of the possibility that a primary isolation plate, a microscope slide, or even a fixed section of a yeast habitat could be treated with a mixture of DNA probes, each tagged with a different chromophore, in such a way that direct identification of individual colonies or even single cells in situ would be achievable. Nonetheless, the determination of a yeast's physiological abilities will never cease to be of importance in understanding its ecological niche. Exhaustive physiological characterization is useful in identifying intraspecific variation. The taxonomist's search for stable characters is foiled by the fact that phenotypic variation is an intrinsic feature of evolving species. Strain variation, which may represent an annoyance in practical taxonomy, is an important element in the recognition that yeast populations in certain communities may constitute distinct biotypes subject to unusual forms of selection. The regularly advanced proposals to disregard completely various characters because they vary within a species should be resisted if taxonomy is to retain an ecological significance. In fact, if taxonomy is to preserve any biological relevance at all, taxonomists should not lose sight of the fact that in variation lies the very essence of biology. 5.5. Community definition The description of a yeast community can range from a simple list of the species and their frequencies to a complex series of ecological parameters. Various measures of diversity based on the species names and frequencies are available (Atlas and Bartha 1993). We have found a quantity termed the effective number of species (Starmer 1982a) usually adequate and conceptually simpler than most entropy based expressions. Other workers (P. Morals, personal communication) have preferred the use of a related quantity termed the "odds" measure of diversity

(Kvalseth 1991). Both measures are based on the probability of re-isolation of a species. It may also be interesting to describe communities as the sum total of the phenotypic properties of their components. Again various statistics are available in the general ecological literature. We have used vectors of the mean results of identification tests to define yeast communities associated with different plant families (Lachance and Starmer 1982) and formulated a number of descriptors based on these vectors adjusted in reference to expected identification results (Lachance and Starmer 1986). This allows one to define a community on the basis of a higher or lower than expected performance on each test. For example, cactophilic yeasts constitute a highly specific community characterized by their significantly less than expected growth on most tested carbon sources, and more than expected growth at 37°C, whereas yeasts isolated from exudates of trees in the birch family, while less specific, exhibit a broader than expected carbon compound utilization and no significant departure from expectation vis-a-vis ?>TC growth. 5.6. Analysis Collections of yeast species and their frequencies, as well as their responses to identification tests, can be analyzed in the form of structured tables, in which similar communities and similarly distributed species are juxtaposed. Species frequencies are also eminently suitable for visualization by means of multivariate methods. A basic understanding of the assumptions and properties of relevant methods should be secured by prospective users, but the procedures, although complex, are easily executed using algorithms available commercially, through internet, or on most institutional computers. A comprehensive discussion of multivariate methods can be found in Legendre and Legendre (1983). The following discussion will be limited to some basic hierarchic clustering and ordination methods. Clustering is most often performed with the UPGMA algorithm, which results in the erection of a dendrogram depicting the various degrees of similarity between communities. Users should be keenly aware that every clustering method imposes distortions, sometimes severe, upon the real structure of the data being analyzed. UPGMA engenders less distortion than many other clustering algorithms, but it will produce a hierarchic dendrogram no matter whether a hierarchic structure exists in the data or not. Clustering should therefore be used with a very critical eye and in conjunction with other methods. Ordination allows complex data to be reduced to a small number of variables (usually 2) whose coordinates are plotted on a graph. Because multivariate data are multidimensional, reduction to two sets of coordinates will inevitably result in some misrepresentation of reality. A most useful ordination method in species-based community ecology is correspondence analysis (CA), because it is designed for the analysis of frequency tables.

4. Ecology and yeasts / M.-A. Lachance and W.T. Starmer

Habitats and the species they contain can be plotted on the same graph on the basis of coordinates that represent the most significant departures from expectation. Species that cluster strongly with a particular habitat may represent a distinct community. Another ordination method, non-metric multidimensional scaling (MDS), creates a plot intended to represent the distance matrix describing communities according to species composition or any other descriptors. Although MDS does not allow the superimposition of species and communities on the same graph, it is applicable to any kind of data and achieves the same purpose as cluster analysis, but without creating a hierarchy that may not exist. A more widely known ordination method, principal components analysis, extracts from the data information elements that exhibit the highest amount of internal correlation. Each resulting component contains information that is uncorrelated with the information in the next. PCA should be restricted to normally distributed data, which are less frequently available in yeast ecology. However, in many cases, this analytical method may help generate insight from large sets of data even if many of its mathematical constraints are not followed to the letter. 6. Molecular ecology 6.1. Molecular identification of biotypes Characterization of DNA sequences that are strainspecific allows the study of biotype distributions in yeast communities. This approach has been used to study natural yeast populations, but has received most attention in the control of implantation and contamination of commercial yeast strains in industrial fermentations. The simplest strategy is the production of strain-specific electrophoregrams by restriction endonuclease digestion of whole genome DNA. This has been used by Lachance (1990a) to study the global dispersal of a cactophilic yeast, Clauispora opuntiae. In that and many other species, tandemly repeated ribosomal DNA is present in such excess that simple agarose electrophoresis of restriction digests produces a clear rDNA banding pattern against a background of other sequences. The pattern can be used as a fingerprint or transformed into a map of the gene cluster. Most of the variation is due to spacer polymorphisms. Electrokaryotyping can also yield unique patterns capable of differentiating strain genotypes. This has been applied successfully to yeasts of oenological (Vezinhet et al. 1990) and clinical (Iwaguchi et al. 1990) interest. A further refinement to molecular identification is the use of labelled DNA probes applied to DNA transferred from a gel to a membrane. Probes are selected from highly variable regions of the genome (Degre et al. 1989) or designed arbitrarily (Walmsley et al. 1989). A variation on the same theme is the use of arbitrarily designed probes to amplify polymorphic DNA fragments randomly by PCR (RAPD, Hadrys et al. 1992). The fragments are separated by electrophoresis. Because of

27

its "black box" nature, RAPD is mostly useful at the preliminary levels of an ecological study, and should give way to other, less ambiguous methods when the community being studied becomes better understood. As DNA sequencing technology progresses, it is quite clear that the complete sequence of suitably chosen DNA markers will constitute the most valuable sort of fingerprinting data. This requires the identification of hypervariable sequences of manageable size, flanked by more highly conserved regions that serve to design primers for amplification. Numerous methods presently exist to perform PCR amplification directly on a few yeast cells. In some laboratories, sequencing reactions are performed directly on amplification products in a few minutes. As rapid, non-isotopic methods for visualizing sequencing gels develop further, it should become possible to obtain a short (e.g., up to 300 bp) sequence from a few yeast cells in less than a day. 6.2. Molecular species tracking Future developments in yeast ecology will no doubt include the application of molecular methods to the tracking of yeast species or individual lineages in their natural habitat. One such approach is the use of reporter genes to study the fate of introduced yeast clones into a habitat, or the movement of genes within natural yeast populations. One of the most promising is the bioluminescence (lux) gene cluster (Kado 1992). Species-specific DNA probes also have much potential in this area. Whereas the technology that would allow exact in situ localization of individual yeast cells or colonies is still under development, the detection of designated species in small samples is now reality. Fell (1993) used a 3-primer system whereby DNA extracted directly from a dilute cell population is subjected to PCR. Each reaction contains two universal primers designed to generate a moderately sized rDNA fragment in any yeast. A third primer, specific to a chosen species, causes instead the appearance of a fragment that is approximately half as large if that species is present. With the rapidly progressing PCR technology, it is conceivable that the presence or absence of a dozen designated species can be assessed within one or two hours from the time the sample is recovered. 7. Ecological aspects of yeast sexuality Theoreticians dealing mostly with organisms for whom reproduction is either exclusively or predominantly sexual have formulated numerous hypotheses regarding the evolutionary significance of sexuality (Michod and Levin 1988), some of which have become part of the biological canon, but none of which is entirely satisfactory. Andrews (1993) examined sexuality as a source of ecologically significant variation, contrasting microorganisms with complex eukaryotes. In differentiated multicellular organisms, the profound specialization opposing germinal

28

//. Importance of yeasts

and somatic tissues has the important result that the environment only indirectly affects gene transmission, by influencing the reproductive output of each individual. In organisms capable of clonal reproduction, different ramets (clones) of the same genet (genetic individual) may transmit genetic variation acquired by mutation or other means to the next generation. Microorganisms are similar to clonal organisms, and thus their evolution is presumed to be less affected by sexuality in the strict sense and more by other factors. In the specific case of the yeasts, Andrews (1993) proposed that the Ty and mating type elements of Saccharomyces could represent potentially important sources of genetic variation. Clonal reproduction notwithstanding, the frequent occurrence of heterothallic sexuality in haploid yeasts suggests that the sexual mating process is adaptive for those yeasts. However, the considerable success afforded to yeasts by their non-sexual reproduction makes it difficult to assess the effect of sexuality upon their fitness through ecological time. This is further complicated by the frequent occurrence of homothallism. We still do not know how extensive sexual reproduction is in natural yeast populations. A general tendency exists for heterothallic haploid yeasts to exhibit local imbalances in their matingtype ratios, which suggests that sexual mating is in fact rare, at least in ecological time. Lachance et al. (1994) examined this question from various angles in Clavispora opuntiae and observed that mating-type imbalances may be self-amplifying because the mating process itself is hindered by imbalances at the population level. Put differently, mating is maximum in an equal mixture of cells of the two mating types, and in turn, frequent mating would be an important factor in maintaining an even ratio of mating types. In that and several other yeasts, Gi arrest is prerequisite to mating, and the arrest is often triggered by nitrogen starvation. It would then appear that ecological pressures favor the elimination of sexual reproduction in haploid yeasts, but that significant evolutionary forces are at work to maintain the process. Future research on the determinants of senescence in eukaryotic microorganisms (Andrews 1993) may provide elements towards understanding the nature of the selective forces involved in the maintenance of sexuality in yeasts. More easily explained in ecological terms is the occurrence of haploid homothallic yeasts, specially those which form fewer than four ascospores, e.g., certain species of Nadsonia, Debaryomyces, Citeromyces, Torulaspora, Hanseniaspora, and others. Homothallism does not preclude cross-fertilization and consequently may well be responding to the same evolutionary pressures as other forms of sexuality. At the ecological level, however, the use of the sexual process to form one or two dormant spores which may exhibit accrued resistance to environmental stress is not only advantageous, but also economical, since it makes use of mechanisms that are already in place in the cell for its sexual functions. The

fact that genetic recombination is not necessarily achieved in this case becomes unimportant. If sexuality occurs freely enough in yeast populations, the various alleles in that population should be distributed randomly with respect to one another except in cases of genetic or selective linkage. Strong allele associations (linkage disequilibria) involving genes that are not linked physically can also be an indication of quasi-exclusively asexual reproduction in populations subject to significant fluctuations in size. Little work has been done in that area. Cactophilic yeasts exhibit a wide diversity of sexual life histories. At one extreme, the common cactus yeast Candida sonorensis is always asexual wherever it has been collected throughout the world (i.e., four different continents). Yeasts classified as Sporopachydermia cereana are in fact a mixture of cryptic species, some of which are self-fertile, some asexual, and some which exhibit what appears to be a pheromone-mediated interaction that could be interpreted as vestigial sexuality. Pichia cactophila, another very common cactus yeast, occurs in nature in the homothallic and diploid state. Pichia heedii is heterothallic, but occurs mostly in the diploid state because its asci are persistent, which causes the fiasion of sister spores of opposite mating types. The heterothallic Pichia amethionina and its close relative Pichia caribaea occur in nature in both the haploid and diploid states, and the spores are released early from the asci. Pichia opuntiae and the related saguaro-specific Pichia thermotolerans occur as haploids in their habitats. As mentioned earlier, Clavispora opuntiae exhibits clear-cut heterothallism and is predominantly haploid. The reasons for the differences in modes of sexual reproduction in these yeasts are not entirely clear, especially because some of them occur side by side in the same habitat (e.g., P. heedii and P thermotolerans) and are subject to the same selective pressures. 8. Clinical ecology and the yeast connection A relatively new ecological interest in yeasts stems from the proposal by Truss (1978) that Candida albicans may be responsible for numerous persistent ailments, ranging from chronic fatigue to depression. Termed "The Yeast Syndrome" (Trowbridge and Walker 1986), the condition allegedly results from three major activities of intestinal populations of C. albicans. One is the conversion of sugars to acetaldehyde; another is a disruption of the integrity of the intestinal lining, allowing large immunogenic molecules to enter the bloodstream; last, the problem is thought to be exacerbated by the release of a large number of antigenic and toxic substances by the yeast. The belief that systemic candidiasis is a major factor associated in some way with a wide number of debilitating conditions, including schizophrenia, memory loss, sexual impotence, multiple sclerosis, rheumatoid arthritis, or chronic fatigue is attributed to Crook (1986), a proponent

4. Ecology and yeasts / M.-A. Lachance and W.T. Starmer

of so-called clinical ecology, which is also known by some as "orthomolecular medicine". Candida albicans is even claimed to produce, in some cases, enough alcohol to result in chronic drunkenness, although at least one attempt to use this as a defense by a person charged with impaired driving has not borne fruit. The issue is complicated by the fact that diagnosis of systemic candidiasis typically does not require evidence that yeast is present in any significant amounts in the host, but is based on indirect evidence, including some rather obscure blood tests. An integrated treatment is proposed, entailing oral intake of ketoconazole, caprylic acid, numerous "natural" preparations including lactic acid bacteria and garlic, vitamins including vitamin C, minerals, essential fatty acids, or massive doses of nystatin. Vaccination and other less obvious forms of immune desensitisation may also be advocated, as well as intravaginal applications of yogurt, or enemas with coffee or other preparations (Trowbridge and Walker 1986). The use of antibacterial antibiotics and steroid medication is discouraged. An unusual diet which eliminates anything thought to be connected with fungi is also advocated. The prohibited foods include sugars, breads, cheeses, alcohol, vinegar, malt and other grains, processed meats, mushrooms, and many nuts and fruits. Eggs, most vegetables, and most lean meats are allowed. Treatment must often be prolonged over several months or even years. The more drastic remedies can apparently trigger a major response of discomfort, nausea, or fatigue in patients. Termed "yeast die-off" or "Herxheimer reaction", the condition is attributed not to the possible side effects of antifungals, but instead to the toxicity of substances released by the killed yeast. Given the extensive popularity and the anecdotal nature of alternative medicine, it is difficult to evaluate the wellfoundedness of this new aspect of yeast ecology. It would be presumptuous and unfair to reject broadly all claims that many idiopathic conditions may be aggravated or even stimulated by Candida albicans, and most insensitive to dismiss the suffering of many as inconsequential. Conventional medicine remains sceptical (Bennett 1990), because of the refiasal of clinical ecologists to approach their treatment scientifically, and the negative evidence obtained in controlled clinical trials. It is clear that systemic infections by Candida albicans are widespread and very serious (Edwards 1991) as a complication in patients whose health is critically compromised. It is less clear whether chronic candidiasis is one of the most prevalent and debilitating conditions afflicting modern humanity. 9. Yeasts as probiotics In sharp contrast to the claim that ingestion of nonpathogenic yeasts, their byproducts, or those of other microorganisms might act as predisposing factors in systemic candidiasis, a growing body of evidence suggests

29

that some yeasts may have significant beneficial effects. Indeed, the administration of baker's or brewer's yeast to patients suffering from diarrhea caused by Clostridium difficile has been shown, in clinical tests, to improve recovery (Schellenberg et al. 1994, Chia et al. 1995). A commercial preparation made up of viable cells of "Saccharomyces boulardii" (possibly a biotype of S. cerevisiae) is effective in the treatment of various intestinal disorders, including chronic diarrhea in humans receiving antibiotics or nasogastric alimentation and in AIDS patients (McFarland and Bernasconi 1993). The treatment requires the presence of a sustained population of this yeast in the intestine, and has no significant effect on the normal intestinal microbiota. Upon cessation of the treatment, the yeast is eliminated in 2 or 3 days. Pathogens successfully antagonized by S. boulardii in gnotobiotic animals include, in addition to Clostridium difficile, Candida albicans. Vibrio cholerae and Entamoeba histolytica. The activity on C albicans includes a decrease in the abundance of pathogenic yeast translocated to the lymph nodes. Although the mechanisms by which yeasts inhibit microbial pathogenic action are not completely understood, it appears that the cell wall glucans play a role in the detoxification and reduction of antigenicity of bacterial effectors. 10. Yeasts and microbial ecology When asked why he had not pursued a lifetime research career in the study of yeasts, a prominent contemporary bacterial ecologist replied that "yeasts do not have an ecology". An extensive treatise entitled "Microbial ecology, principles, methods, and applications" (Levin et al. 1992) was published recently in response to the growing importance of the environmental role of microorganisms, in particular those used for biotechnological purposes. Although the yeast genera Saccharomyces, Candida, and Kluyveromyces are listed in the first chapter as having a potentially significant impact on human activity, no fiirther mention of these or any other yeasts is made throughout the book. References to yeasts are also conspicuously rare in other major microbial ecology treatises (Andrews 1993, Atlas and Bartha 1993, Stolp 1988). Such a "poor cousin" figure is neither unexpected nor alarming, if it is realized that to a large degree yeasts play a rather minor role, in the biosphere, compared with other microorganisms that may act as primary producers, predators, pathogens, or important agents of nutrient cycling. The role of yeasts in geochemical cycling takes second place to that of bacteria. As carbon cyclers, yeasts respire and often perform a fermentative glycolysis, but are rather restricted in the nature of the carbon sources they may assimilate. Few if any yeasts excrete cellulases or chitinases, thus restricting their contribution to decay. Extracellular amylases, lactases, maltases, proteinases, ureases, lipases, or other enzymes produced by yeasts are usually dwarfed by more powerful counterparts in

30

//. Importance of yeasts

the bacteria or the filamentous fiingi. The contribution of yeasts to nitrogen cycUng sometimes involves nitrate reduction or ammonification of nitrite, but is usually restricted to the assimilation of ammonia or amino acids into organic nitrogen. Most yeasts act as sulfate reducers, and some are sulfiir auxotrophs. Although many yeasts can grow at pH values as low as 2.5, none can challenge Thiobacillus, which is capable of growth at pH values near 0. The growth of Debaryomyces hansenii in 3.0M sodium chloride is no rival to that of halophilic bacteria in saturated (5.2 M) salt, and no yeast could conceivably survive alongside thermophilic bacteria able to grow at 100°C. The list of examples of how meagre is the potential of yeasts to colonize extreme environments could go on for pages, but the point has undeniably been made that our preoccupation with yeast ecology cannot be enkindled by the same incitements as the bacteriologist's quest for more and more unusual habitats and for examples of organisms responsible for geologically significant phenomena. Instead, the study of yeasts in an ecological context has to address phenomena in which yeasts do participate. In spite of the profound difference between yeasts and bacteria, yeasts lend themselves to most of the methodologies so useful in the study of bacteria. As a result, microbial ecologists with a bacteriological leaning may try to identify in yeasts patterns that may not apply to yeasts. At the same time, plant and animal

ecologists, accustomed to observations based on more immediate identifications of their target organisms, often do not integrate microbial components in their otherwise powerful models. Andrews (1993) addressed this matter by drawing an extensive comparison of the ecologies of large and small organisms. Among the main fimdamental differences he identified between these two kinds of organisms, the capacity of most microorganisms for extensive dormancy, high growth rates, narrow permissible growth conditions, a high degree of metabolic adaptability, the direct exposure of unicellular forms to selection, large numbers, a predominantly haploid condition, and a diminished role for sexuality. Not unexpectedly, most of the comparisons drawn by Andrews were directed at microorganisms other than yeasts. We are convinced that yeasts can and should be studied extensively in an ecological and evolutionary perspective, and that such studies will yield bounteous rewards. Yeasts were a major focus of microbial ecology at very early stages, and could represent the organisms of choice to tackle the new challenges facing evolutionary ecology today. Moreover,fiitureprogress in yeast taxonomy should benefit greatly from accentuating its ecological flavor. But the nearly obligate association between yeasts and other living organisms will make it advantageous to use a multidisciplinary approach, and consequently yeast ecologists will gain by joining forces with specialists of other biological disciplines to pursue common endeavors.

Part III

Ultrastructural and molecular properties used for yeast classification

This Page Intentionally Left Blank

Chapter 5

Cytology and ultrastructure of yeasts and yeastlike fungi Royall T. Moore Contents 1. 2. 3. 4.

Introduction Cellular growth Hyphae Sexual cycles

33 33 40 41

r

Outer plaque

90 kD Component

Intermediate Line

?

Nuclear membrane

110 kD Component 90 kD Component

1. Introduction Classification of fiingi is based extensively on morphology, mostly as determined by light optics. During the past 30 years, however, electron microscopy has provided critical new observations that have enlarged this foundation to include micromorphology (see Hohl 1987, Moore 1989a, 1994, 1996a). This new information, and that provided by molecular biology (Bruns et al. 1992), has sharpened and clarified the delimitations of a number of taxa, including the distinction between ascomycetes and basidiomycetes. One consequence of this expanded knowledge has been the general recognition of the Fungi as a kingdom on a par with those of plants and animals (Moore 1996c); another aspect has been the challenge of adapting the nomenclatural framework to reflect the additional taxonomic information (Moore 1974, 1994). The kingdom Fungi is eukaryotic and characterized by cell walls that have a major chitin component (BartnickiGarcia and Lippman 1989), hyphae that extend apically (Wessels 1986, Bartnicki-Garcia et al. 1989, Howard 1981, Kotov and Reshetnikov 1990) and divide by centripetal invagination of the plasma membrane (see Moore 1985 and below). In general, fungal nuclei are haploid, small (~1 \xm in diameter), have envelope pore complexes similar to those of other eukaryotes (Allen and Douglas 1990, Carter 1978, Nehrbass et al. 1990), and amounts of chromosomal DNA intermediate between that of bacteria and plants and animals (Sparrow et al. 1972, Duran and Gray 1989). Microtubular organizing centers (MTOCs) called spindle pole bodies (SPBs), chromosomes, and modes of nuclear division are unique. There is a single SPB (Fig. 1) intimately associated with the nuclear envelope (Heath 1981, O'Donnell and McLaughlin 1984a, Rout and Kilmartin 1990, O'Donnell 1992) that divides during nuclear division. Mitotic chromosomes are difficult to discern by light microscopy and they rarely become organized into a metaphase plate (see King and Hyams 1982, Burns 1988). In most species, the nuclear envelope persists during both

80 kD Component

Chromosomal Microtubules Pole to Pole Microtubules -

Fig. 1. Spindle pole body (SPB). SPB localizations and spindle components (from Rout and Kilmartin 1990).

mitosis (Boekhout and Linnemans 1982, King and Hyams 1982, Heath et al. 1982, Bourett and McLaughlin 1986, Tanaka and Kanbe 1986) and meiosis (Howard and Moore 1970, O'Donnell and McLaughlin 1984a). During nuclear division, the SPB divides and each SPB generates spindle and astral microtubules (mt's) as they migrate around the nuclear envelope to opposing polar positions (Heath 1981, O'Donnell 1992). 2. Cellular growth 2.1. Introduction Yeasts, for the most part, are single-celled, typically uninucleate fungi that reproduce by forming new cells serially. The nature of the cell wall provides the initial dichotomy in classification. The difference in wall structure between ascomycetous and basidiomycetous forms is indicated by the electron microscopic image of the budding site. Ascomycetes (Fig. 2) have two closely appressed wall layers (that of the emerging bud and that of the parent cell) whereas for Basidiomycetes (Fig. 3), the parent cell wall is multi-layered and ruptured, appearing as a collar consisting of a series of splayed wall layers (Kreger-van Rij and Veenhuis 1971a, Miller et al. 1976b, Simmons and Ahearn 1987). Biochemical traits parallel this dichotomy: (1) ascomycetes give no visible response to diazonium blue B (DBB) while those of basidiomycetes give a reddish to purple color (van der Walt and HopsuHavu 1976, Hagler and Ahearn 1981, Simmons and Ahearn 1987); (2) only ascomycetous species give a positive response to certain protoplast releasing enzymes (Bastide et al. 1979, 1986); and (3) pyrophosphatidic acid 33

34

///. Ultrastructural and molecular properties used for yeast classification

(pyro-PA) is found exclusively in basidiomycetous species (Goto et al. 1988). Studies that examine changes during specific times in the cell cycle of yeasts and otherfiangi(Herskowitz 1988, Nasmyth 1996) frequently use cell division cycle (cdc)

mutants. Four phases are commonly recognized in the cdc: Gi - gap 1, an interval before DNA synthesis; S - an interval of DNA synthesis; G2 - gap 2, an interval between the end of DNA synthesis and the initiation of mitosis; and M - mitosis. 2.2. Blastic cell division 2.2.1. Bud formation in ascomycetous yeasts: At the start of bud formation in ascomycetous yeasts (see Moore 1987b) vesicles aggregate at the bud site (Moor 1967a, Byers and Goetsch 1975, 1976, Crandall et al. 1977; see Fig. 4: c,l). Some of these vesicles probably contain enzymes (Moor 1967a) that cause plasticizing of the glucans and mannans that, in turn, allow the chitinless cell wall to stretch as the bud balloons out and generate wall layers confluent with those of the parent cell (Fig. 2) (Djaczenko and Cassone 1971). Cytokinesis

Fig. 2. Ascomycete-type budding (Saccharomyces cerevisiae). Grazing section of an early bud showing a number of rings in the neck region (from Byers and Goetsch 1976). Bar=250nm.

Fig. 3. Basidiomycete-type budding: (A) initial bud cell of Filobasidiella (Cryptococcus) neoformans (courtesy of R. Calderone, from Pelczar and Chan 1981). The dark:light:dark wall layers of the parent cell are prominent and are discontinuous at the budding site. The wall layers of the emergent bud are discrete from those of the parent cell and consist mostly of a shell of light material bounded on either side by just discernible layers of dark material. Bar=1.5jim. (B) Budding cell of Filobasidiumfloriforme(from Moore and Kreger-van Rij 1972). Several generations of budding have produced a ruff around the budding site. Four collars of dark material are evident (arrows) and are considerably thicker than the intervening light layers. Bar = 250nm.

Fig. 4. Cell and nuclear division and conjugation in Saccharomyces cerevisiae (redrawn from Byers and Goetsch 1975). (a-f): (a) cell that has reached the critical size necessary for division; (b) division of the spindle pole body (SPB); (c) daughter SPBs start to separate and generate spindle microtubules (note persistence of astral microtubules), the bud initial contains a number of vesicles formed from the endoplasmic reticulum; (d) daughter SPBs migrate to opposite sides of the nucleus, cytokinesis starts; (e) beginning of nuclear division and start of daughter nucleus moving into bud cell; (f) just before cell separation the nucleus becomes dumbbell-shaped, septum formation starts. Conjugation (b, g1): (b -^ g) after haploid cells, facilitated by mating substances, become synchronized and gametic, maximum cell-to-cell contact is achieved; (g) lytic vesicles partially dissolve the fusion wall effecting plasmogamy; the SPBs retain their opposing orientation; (h) the SPBs have lead the nuclei to the narrow intercellular opening which will restrict nuclear passage to the extended, SPB-bearing region; (i-k) interpolated perspective views of karyogamy (note the regular size and spacing of nuclear pores), (i) Aster-to-aster ftision and initial contact of the nuclear envelopes; (j) ftision of the two SPBs resulting in the fusion of the contiguous nuclear envelopes; (k) fusion SPB with aster; (1) the first bud of the zygote usually emerges from the ftision site. (1 -^ c) SPB duplication as in a typical cell division.

5. Cytology and ultrastructure of yeasts and yeastlike fungi / R.T. Moore

occurs in the neck of the bud (Fig. 4: f) and involves the formation of a highly ordered ring of lOnm filaments lying on the interior surface of the plasma membrane and, in glancing electron micrographs of the bud/parent cell isthmus, appear as stria parallel to the long axis (Byers and Goetsch 1976, Byers 1981, Heath et al. 1982, Takeo et al. 1987) (Fig. 2). The initial circumferential space formed by the invaginating plasma membrane is subsequently filled by an electron translucent "constricting ring" of chitin (Cabib and Farkas 1981). As invagination proceeds, chitin extends across the cell (Bowers et al. 1974) and at completion has a central punctum (Cabib and Bowers 1971). Later, secondary wall layers like those of the homogeneous main cell wall (Cabib 1975) and of similar electron dense appearance are laid down on both sides of the primary septum. Bud separation leaves a flanged discus of chitin on the parent cell as the principal component of the bud scar. In Candida albicans, bud scars lack anionic sites (Horisberger and Clerc 1988). The one bud per locus mode of budding limits the number of buds that a parent cell can produce (Mortimer and Johnson 1959, Freifelder 1960, Gyllenberg 1986). Budding by members of the genera Hanseniaspora, Nadsonia, Saccharomycodes, Wickerhamia and their anamorphs is bipolar, i.e., budding occurs just at the poles of the ovoid parent cell. Polar budding can occur repeatedly through the previous bud scar on a broad base, and leaves a succession of appressed, annellidic rings corresponding to the formation of each new bud. At the time of bud initiation in Saccharomyces cerevisiae, the duplicated SPB divides (King and Hyams 1982, Rout and Kilmartin 1990) and the separated SPBs migrate to opposite poles of the nucleus (Fig. 4: a-f). In the course of this movement around the nuclear envelope, the SPBs generate extranuclear mt's (i.e., cytoplasmic or astral) and an intranuclear spindle composed of pole-topole and chromosomal mt's. In Saccharomyces cerevisiae (Byers and Goetsch 1974, 1975) the SPB acquires a satellite during the latter part of the cdc Gi phase (prior to bud initiation, see below); early in budding, near the start of the cdc S phase, a pair of SPBs become evident that, by the end of this phase, have formed a complete spindle. Spindles in Saccharomyces cerevisiae (Moor 1967b, King and Hyams 1982), Schizosaccharomyces pombe (Ding et al. 1993), Rhodosporidium (Boekhout and Linnemans 1982), Taphrina (Heath et al. 1982), and other yeasts have been shown to be composed of two types of mt's, each composed of 13 proto-filaments (Kilmartin 1981): (1) those mt's of equal length that constitute a prominent central fascicle formed as they pass in opposite directions through the nucleoplasm to become attached, respectively, to the opposite SPB and (2) those mt's of varying lengths that attach to the chromosomes and form opposing May-pole-like splays around the central bundle. In most plant and animal cells the mt attachment site is marked by a primary chromosome constriction, the centromere/kinetochore complex (see Fitzgerald-Hayes

35

1987); this configuration is absent in Saccharomyces cerevisiae (Peterson and Ris 1976). Peterson and Ris (1976) have also shown that the number of SPB-tochromosome mt's in Saccharomyces cerevisiae closely approximates the known number of linkage groups {n = \l) in haploid and diploid cells. In Saccharomyces cerevisiae there are two possible growth ontogenies (Gimeno and Fink 1992): haploid cells express an axial budding pattern in which new buds emerge at the parent/bud cell junction; diploid cells, which are more prevalent in nature, express a polar budding pattern in which new buds emerge from the previous bud cell on the side opposite the junction of that cell with its progenitor, forming a pseudohypha. Towards the end of division, the nucleus becomes dumbbellshaped with an attenuated membrane isthmus between the incipient sibling nuclei. Telophase spindle elongation takes place across the bud/parent cell isthmus. 2.2.2. Bud formation in basidiomycetous yeasts: Budding in basidiomycetous yeasts occurs repeatedly from a single locus (Fig. 3B). After several generations, this produces a ruff around the budding site composed of accumulated ruptured wall layers (e.g., Baharaeen and Vishniac 1982, Vishniac and Baharaeen 1982, Pore and Sorenson 1990). While the chitin composition of ascomycetous yeasts localized in the bud scar is only 12% (Simmons 1989), in Cryptococcus spp. it is 5-8% (see Fleet 1985), and in a strain of Rhodotorula glutinis it is also relatively high (Berthe et al. 1981). Distribution of chitin (Simmons 1989) can occur evenly throughout the wall (Cryptococcus neoformans) or be localized in the collarette (Malassezia spp.). In electron micrographs the cell wall appears to have the characteristic basidiomycete profile composed of alternating electron transparent and electron dense layers (Fig. 3B); the dense layers are relatively thick and easy to see, the intervening transparent layers are thin and hard to discern in most micrographs, causing them to appear as transparent space. The electron transparent layer in Fig. 3A, however, is prominent. In this figure of Cryptococcus neoformans, the bud is probably the initial bud cell because the dark material around the exit site is homogeneous. The sandwiched transparent layer, which is about the same thickness as the bounding electron dense layers, is probably chitinous. The transparent layer is the principle component in the bud; fiirther, the wall layers of the bud originate in the parent cell cytoplasm and are not an integral extension of the parent cell wall. Separation probably conveys most of the bud scar to the bud, i.e., the central chitinous transparent layer and the subtending, outer, amorphous electron dense layer (Moore 1989b). There are several notable differences between nuclear division in ascomycete and basidiomycete yeasts. In ascomycete yeasts (Figs. 1, 4), spindle formation takes place in the parent cell and the nucleus enters the bud directly as it is being formed (Soil et al. 1978). In basidiomycete yeasts (Fig. 5), the initial event of spindle

36

///. Ultrastructural and molecular properties used for yeast classification

Fig. 6. Geotrichum candidum. Scanning electron micrograph showing arthric cell division (from Cole 1975). Length of a single cell is about 13.5 pim.

Fig. 5. Nuclear division in Leucosporidium scottii (from McCully and Robinow 1972a). (A) Initial bud formation (note the break in the parent cell wall and the orientation of the nucleus and SPB); (B) the nucleus has become pear-shaped with the pointed portion extending towards the bud; (C) nucleus enters the bud led by the asters and SPB; (D) division of SPB, start of daughter SPBs migration; (E) the initial event of elongation takes most of the nucleus into the bud, the small piece left behind containing the nucleolus is absorbed, the nuclear envelope partially dissociates; (F) continued spindle elongation separates the chromosomes; (G) further spindle elongation injects a nascent daughter nucleus into the parent cell; (H) daughter nuclei occupy each end of the budded cell, cytokinesis will occur in the constriction.

elongation takes most of the nucleus into the bud, leaving behind a small piece containing the nucleolus, which typically disappears. Division and spindle formation occur within the bud. A second phase of elongation of the intranuclear spindle carries a developing bud nucleus back into the parent cell; during this phase there is also a partial breakdown of the nuclear envelope. This mode of nuclear division has been reported for Bullera (Taylor and Wells 1979), Leucosporidium (McCully and Robinow 1972a, Boekhout and Linnemans 1982), Rhodosporidium (McCully and Robinow 1972b, Abe et al. 1984), and Ustilago (Poon and Day 1976a,b). 2.2.3. Conidiogenesis vs. budding: Von Arx (1979b) considered yeast buds as blastoconidia or arthroconidia. There are, however, several fundamental differences

between an aerial, hypha-produced conidium (Smith and Anderson 1973) and a single self-replicating yeast cell (Davies 1987): (1) conidiogenous cells draw on, package, and disperse resources of a growing, translocating mycelium (Wessels 1986, McKerracher and Heath 1987, Moore 1987b); (2) hyphal walls and conidia have a sizeable chitin component (Farkas 1990); ascomycete yeasts, however, lack chitin (see Horisberger and Clerc 1988, Simmons 1989) except for the bud scar, while basidiomycete yeasts have only a small, though perceptible, chitin fraction (Simmons 1989); (3) P-l,4-glucan is a component of conidial walls but not of corresponding hyphal walls (Benhamou et al. 1990); (4) filamentous fungi, unlike yeasts, give inconsistent DBB results (Summerbell 1985) unless treated with cold KOH (Hutchinson and Summerbell 1990). Conidial differentiation (abstriction) generally requires complete septation (Minter 1984, Cole 1986) and may be arthric or blastic. Arthric abstriction involves progressive septation within a hypha (e.g., Geotrichum, Fig. 6) or an existing cell (e.g., Schizosaccharomyces and partspore formation in the Clavicipitales). Blastic abstriction accompanies a brief period of rapid expansion and new wall formation after turgor pressure balloons-out a local softening of the parent cell wall (see Moore 1987b) and ends with septum formation at the base of the new cell. Spore separation (disarticulation) is effected by the breakage or lysis of the hyphal wall opposite the septum. 2.2.4. Pseudohyphae formation: Species of some yeasts have the capacity to form pseudohyphae, a series of coherent, sausage-like, "elongate blastospores" (Scherwitz et al. 1978). Dimorphism in Candida albicans is pH regulated. Under conditions of high pH (Anderson and Soil 1986) a constricting filament ring, the anlage of the septum, is initiated a half-hour after the start of bud emergence (Soil 1986). In addition, actin remains clustered in the growing tip rather than becoming redistributed as in normal budding (Adams and Pringle

5. Cytology and ultrastructure of yeasts and yeastlike fungi / R.T. Moore i,4#,^^^^^ - - surface coat ^§^0M^^^^l^ outer wall components iW "-,"" inner wall components Sj .\^ plasmalemma fil septal plate ^ - inter-plate matrix - micropore

^^y^inh^ Fig. 7. Model of the crosswall of Candida albicans (from Gooday and Gow 1983).

1984, Kilmartin and Adams 1984, Anderson and Soil 1986, Heath 1990). There is also evidence that nutrition can affect which morphology is expressed (Shepherd and Sullivan 1976). Elongate pseudohyphal cells are separated by constricted septa, each with a micropore (Gow et al. 1980) (Fig. 7). When these cells break apart each septum appears composed of two chitinous plates, one going to each cell. In Saccharomyces cerevisiae only the diplophase forms pseudohyphae (Gimeno and Fink 1992).

37

Conditions for the phase change are known for a few other species (e.g., Brunton and Gadd 1991, Gimeno and Fink 1992) and there is a growing body of information concerning the molecular biology of the shift between the two morphologies (Schultz et al. 1974, Moore 1987b, Kreisel and Schauer 1989, Maresca and Kobayashi 1989, Kotov and Reshetnikov 1990, Wessels 1990). The yeast/mycelium transition has also been studied electron microscopically (Hirata et al. 1980, Borgia et al. 1989) and computer simulated (Bartnicki-Garcia et al. 1989, Bartnicki-Garcia 1990). There are no substantiated examples of a yeast phase in the Homobasidiomycotina (Laaser et al. 1988, 1989); however, dimorphic life cycles are characteristic of many heterobasidiomycetes (Wells 1994).

2.3. Arthric cell division 2.3.1. Geotrichum candidum: In Geotrichum candidum (Fig. 6) and other species with similar holoarthric conidiogenesis (Cole and Samson 1979, pp. 108-116) growth is by hyphal tip extension with septation and disarticulation proceeding centripetally. The initial septum is electron transparent but the mature septum has electron dense layers on either side (Steele and Fraser 1973). The 2.2.5. Dimorphism in filamentous species: Dimorend walls of the mature arthrospores are composed only phism, in which there is an environmentally controlled, of the respective secondary septal layers and are generally reversible interconversion of yeast and true hyphae or characterized by plasmodesmata or micropores (Table 5). pseudomycelium, Y <-^ M, occurs in a number of species Karyological differences exist between Geotrichum (Romano 1966). The Y-phase, depending on the species, candidum and Schizosaccharomyces pombe. Nuclei of will exhibit characteristic budding of either ascomyceGeotrichum behave like those of hyphae, dividing and tous or basidiomycetous yeasts, and the M-phase, in reforming before septogenesis (Cole and Samson 1979, filamentous species, will be characterized by hyphae with representative ascomycete- or basidiomycete-type septa, Cole 1986) whereas the nuclei of Schizosaccharomyces and in many species there is a specialized hyphal tip are typical of yeasts and divide concomitantly with region called a Spitzenkorper (Grove 1978, Howard 1981, septogenesis (see Hayles and Nurse 1989). Howard and Aist 1979, Hoch and Howard 1980). 2.3.2. Schizosaccharomyces pombe: Mitosis in SchizoFor a dimorphic basidiomycete to complete its life saccharomyces pombe starts with SPB division and cycle, it is necessary that Y-phase cells generate sec- migration of the SPBs to opposite sides of the nucleus ondary mycelium comprised of hyphae that are either (Tanaka and Kanbe 1986). In the course of this movedikaryotic (Flegel 1981) or diploid (Abe and Sasakuma ment around the nuclear envelope the SPBs generate 1986). Hirata et al. (1980) observed that by placing extranuclear astral mt's and an intranuclear spindle. Tremella mesenterica Y-phase cells in a hormone solution Early in division, the central fascicle of continuous in which cells of the opposite mating type had been grown, SPB-to-SPB mt's assumes a sigmoidal shape. However, they were able to induce mating-tube formation. The sites reconstructed spindles reveal that mitosis in S. pombe and manner of initiation and emergence of these germ is like that of other eukaryotes (Ding et al. 1993). tubes was similar to that of buds. As the tube emerged Cytokinesis is not initiated until the nucleus has become it assumed linear growth and the nucleus, preceded by dumbbell-shaped. Centripetal invagination of the septum mitochondria, moved into the tube with the SPB at the ultimately partitions the sibling nuclei in separate cells. The initial events of cytokinesis occur at the end of leading end of the nucleus. In Rhodosporidium toruloides, mating-tube formation karyokinesis (Johnson et al. 1982, Tanaka and Kanbe is also under hormonal control (Tsuchiya et al. 1978, 1986) before the isthmus connecting the separating sibling Miyakawa et al. 1986). A complete repression of nuclear nuclei has parted. The electron transparent part of the division occurs with the induction of mating-tube for- completed septum fluoresces brightly when stained with mation; as tube elongation proceeds the nucleus moves Calcofluor or primulin (Streiblova 1981). into the tube and migrates to the apex. Removal of the Chitin is absent in S. pombe (Horisberger and Rouvethormonal factor causes the resumption of growth by Vauthey 1985): (3-glucan and a-galactomannan are inbudding (Abe et al. 1977). terwoven in the cell wall; in the cell plate the former

38

///. Ultrastructural and molecular properties used for yeast

classification

Table 5 Septal morphology of yeastlike fiingi Morphology

Genus/Species

Reference(s)

Closure-line or macropore

Arthroascus

SQQ Moore (1987b) see Moore (1987b)

Blastobotrys Dipodascus

uninucleatus

Hyphopichia

see Moore (1987b)

Sporothrix fiingorum

see Moore (1987b)

Stephanoascus

see Moore (1987b)

Pichia

see Moore (1987b)

(Hansenula)

see Moore (1987b)

Yarrowia Plasmodesma: random array

see Moore (1987b)

Ascoidea Dipodascus

Plasmodesma: circular array

Dolipore/Parenthesome: O1/P2 02/P3,4

Kreger-van Rij and Veenhuis (1974)

aggregatus

Kreger-van Rij and Veenhuis (1974)

Endomyces

see Moore (1987b)

Geotrichum

see Moore (1987b)

Galactomyces

see Moore (1987b)

Guilliermondella

see Moore (1987b)

Kriegeria

Doubles and McLaughlin (1991, 1992)

Saccharomycopsis

see Moore (1987b)

Sporothrix

Smith and Batenburg-van der Vegte (1985)

guttulifijrmis

Stephanoascus

see Moore (1987b)

Zygozyma

van der Walt et al. (1991)

Dipodascus

magnusii

see Moore (1987b)

Dipodascus

ouetensis

see Moore (1987b)

Dipodascus

tetrasperma

see Moore (1987b)

Cerinosterus

see Moore (1987b)

Bulleromyces

Boekhout et al. (1991a)

Filobasidium

capsuligenum

Hyalodendron

see Moore (1987b) see Moore (1987b)

Moniliella

see Moore (1987b)

Sirobasidium

Moore (1979)

Rhynchogastrema

Metzler et al. (1989)

Tetragon iomyces

Oberwinkler and Bandoni (1981) see Moore (1987b), Oberwinkler (1985), Berbee

Tremella

and Wells (1988) Trichosporon asahii

Gueho et al. (1992b)

Trichosporon coremiifi)rme

Gueho et al. (1992b)

Trichosporon cutaneum

Gueho et al. (1992b)

Trichosporon laibachii

Gueho et al. (1992b)

Trichosporon monilifi)rme

Gueho et al. (1992b)

Trichosporonoides

see Moore (1987b)

Trimorphomyces

Oberwinkler and Bandoni (1983)

O2/P5

Wallemia

see Moore (1986, 1987b)

O2/P6

Filobasidium

floriforme

see Moore (1985)

Filobasidiella

neofiyrmans

see Moore (1985)

Filobasidiella

depauperatus

see Moore (1985)

Itersonilia

Boekhout (1991b)

Phragmoxenidium

Oberwinkler et al. (1990c)

Stilbotulasnella

see Moore (1985)

Syzygospora

Ginns (1986)

= Carcinomyces

Oberwinkler and Bandoni (1982a)

- Christiansenia

Oberwinkler and Bandoni (1982a)

Trichosporon mucoides

Gueho et al. (1992b)

Trichosporon

Gueho et al. (1992b)

sporotrichoides

continued on next page

5. Cytology and ultrastructure of yeasts and yeastlike fungi / R.T. Moore

Table 5, continued Morphology

Genus/Species

Reference(s)

Nanopore

Atractiella

Oberwinkler and Bandoni (1982c)

Agaricostilbum

Oberwinkler and Bandoni (1982c)

Bensingtonia

Boekhout et al. (1992b)

Camptobasidium

Marvanova and Suberkropp (1990)

Chionosphaera

Oberwinkler and Bandoni (1982c)

Erythrobasidium

Suh et al. (1993a)

Exobasidium

Khan et al. (1981b), Patrignani et al. (1989)

Graphium

Oberwinkler et al. (1982)

Helicobasidium

Bourett and McLaughlin (1986)

Herpobasidium

Oberwinkler and Bandoni (1984)

Kondoa

Suh et al. (1993a)

Leucosporidium

fellii

Suh et al. (1993a)

Leucosporidium

scottii

Moore (1972)

Naohidea

Oberwinkler (1990)

Occultifer

Oberwinkler (1990)

Pachnocybe

Oberwinkler and Bandoni (1982c), Kleven and McLaughlin (1989)

Phleogena

Oberwinkler and Bandoni (1982c)

Platygloea

Aoki et al. (1986)

Rhodosporidium

dacryoideum

Suh et al. (1993a)

Rhodosporidium

sphaerocarpum

Moore (1972)

toruloides

Johnson-Reid and Moore (1972)

Rhodosporidium Sporidiobolus

Septobasidium-likc

johnsonii

Moore (1972)

Sporidiobolus

Boekhout et al. (1992b)

Ustacystis

Bauer et al. (1995)

Atractogloea

see Moore (1987b), Oberwinkler and Bandoni (1982b)

Septobasidium SLN (slightly lipped nanopore)

Dykstra (1974)

Cystofilobasidium

capitatum

Cystofilobasidium

lari-marini

Mrakia frigida

Moore (1972), Roberson and Luttrell (1987a,b)

Tilletia foetida

Moore (1972)

Tilletia indica

Roberson and Luttrell (1987a,b)

Tilletiopsis fuluescens Tilletiopsis minor

Bauer et al. (1989)

Ustilago maydis

Moore (1972), O'Donnell and McLaughlin

sorghi-vulgaris

Cystofilobasidium

infirmo-minlatum

Entyloma

(1984b) Moore (1972) Marvanova and Suberkropp (1990) Boekhout et al. (1992b), Moore (1972)

Spacelotheca Sympodiomycopsis Tilletia barclayana Tilletiaria Tilletiopsis

Boekhout et al. (1992b) Boekhout et al. (1992b)

Ustilago avenae

Cintractia

Suh and Sugiyama (1993a) Suh et al. (1993a)

Tilletia caries

Amorphous

Oberwinkler et al. (1983)

pallescens

Ustilago nuda Ustilago tritici

Bauer et al. (1989) Suh et al. (1993a) Moore (1972) Boekhout et al. (1992b) Boekhout et al. (1992b) Moore (1972) Bauer et al. (1989)

39

40

///. Ultrastructural and molecular properties used for yeast classification

Fig. 8. Perforate septa of various fiingi (from Moore 1972). (A) Ascomycete type of an unidentified anamorph. Bar = 250nm. (B) Basidiomycete type (Polyporus biennis). Bar = 250nm. (C) Basidiomycete type (Leucosporidium scottii). Bar=250nm.

is associated with the primary septum while the latter is associated with the secondary septum; on the cell surface, |3-glucan, in exact opposition to a-galactomannan, is detected only on the wall layers generated by division but not on those growing by extension. As a consequence of the lysis of the primary septum, the new end wall of each cell is one of the secondary wall layers formed on either side of it. Each new end wall (see Miyata et al. 1990) is like the original wall layer of the parent cell but thinner; one sibling cell, however, retains a jacket of old wall material. As a result of this mode of cell division, the pattern of wall scars is different for each cell (Streiblova 1981). When growth resumes, it starts at the old ends (see Hagan and Hyams 1988, Mitchison 1990). Ultrastructural observations of S. pombe are complemented by light microscopic and biochemical studies. According to Hagan and Hyams (1988): (1) cytoplasmic mt arrangement most closely resembles that of filamentous fungi (possibly a consequence of cylindrical cell shape); (2) interphase occupies -^75% of the cdc during which time cells more or less double in size (from 7 to 14|im); (3) certain cytoplasmic mt's, which longitudinally span the cell and disappear at the time of mitosis, may play a role in positioning the nucleus and in establishing the cell's polarity (this array is reestablished by a pair of MTOCs at the cell equator after the mt's of mitosis depolymerize); (4) disruption of mt function leads to a controlled loss of wall deposition, resulting in distended or branched cells (in Saccharomyces cerevisiae, however, enlargement continues normally in the absence of mt's even though nuclear positioning becomes random); (5) F-actin undergoes structural rearrangements during the cdc at three distinct points - (a) in G2 phase, at the transition from monopolar to bipolar cell growth; (b) in M phase, at the initiation of septation; and (c) at the cell division/Gi phase boundary at the reinitiation of monopolar growth. Cellular distribution of F-actin varies during the course of the cdc (Marks et al. 1986, Steer 1990): (1) during final cell elongation, prior to division, it is predominantly located at the growing ends of the cell; (2) in the course of division, the least amount is observed

during karyokinesis, while during cytokinesis it becomes concentrated equatorially; (3) as division proceeds to cell separation, it becomes concentrated at both the new (postdivision) ends, as well as, again, at the original ends. y-Tubulin has been found to occur throughout the cell cycle and to be associated with mt development in the regions of the SPBs (Horio et al. 1991). It probably has a role in mt formation because mutants in which its fiinction is disrupted display condensed, undivided chromosomes with aberrant spindle structures that result in cell death. 3. Hyphae 3.1. Septal ontogeny Cell division in filamentous species is first discernible when a narrow annulus of the plasma membrane is formed (Girbardt 1979). Centripetal growth of this annulus partitions the cytoplasm with an infolded membrane. New wall material is deposited on the outer surface of the membrane: beneath the lateral wall layer and along the ingrowing annulus (Moore 1965). Septal ontogeny can have any of several different conclusions depending on the taxon or the particular cell type: (1) in most species of the Chytridiomycota and Zygomycota and in some yeasts, particularly the Schizosaccharomycetales (Eriksson et al. 1993, Kurtzman 1993a), constituting a small percentage of fungi, the final ingrowth of the annulus results in complete cytokinesis and the formation of an abscissional septum; (2) in a few species of yeastlike fimgi the center of the mature septum is characterized by a punctum or minute micropore; (3) in the great majority of ftmgi certain mucors and trichomycetes (see Moore 1987b, Saikawa 1989), ascomycetes, and basidiomycetes - the mature septum is perforate (Fig. 8) (Markham 1994). These studies have demonstrated that septal ultrastructure is a robust indicator of taxonomic relationships (Moore 1985, 1987b, 1988b, 1989a, 1994, 1996a). 3.2. Ascomycete-type 3.2.1. Perforate septa: In ascomycete hyphae, septa are, for the most part, homogeneous and electron transparent.

5. Cytology and ultrastructure of yeasts and yeastlike fungi / R.T. Moore

Pores (Fig. 8A) are large (of sufficient size for the passage of nuclei), have rounded rims, and frequently are accompanied on either side by Woronin bodies (Markham and CoUinge 1987), which are membrane bound electron dense inclusions with paracrystalline material. Hyphae of Ambrosiozyma (synonym Hormoascus) have greatly centrally-thickened septa (van der Walt and von Arx 1985). 3.2.2. Micropores and plasmodesmata: In some yeasts and yeastlike fungi a minuscule membrane cylinder in the center of the final septum (Fig. 7) may appear as either a micropore (with a central channel) or a closure line (that looks like a punctum in surface view) (Table 5). Micropores are not the same as plasmodesmata. Distribution of plasmodesmata can be random or circular (Table 5). General reviews of plasmodesmata can be found in Marchant (1976) and Robards and Lucas (1990). Van der Wak et al. (1991) consider the plasmodesmatal canals in Zygozyma to be further evidence for the connection between the Lipomycetaceae and Dipodascaceae. Multiperforate septa in the basidiomycete Kriegeria eriophori (Platygloeales) (Kao 1956, Doubles and McLaughlin 1991) may have an ontogeny similar to those in ascomycetes. 3.3. Basidiomycete-type 3.3.1. Introduction: Basidiomycete walls and septa, in toto, are tripartite (Figs. 3, 8B,C). They are composed of a central electron transparent layer, probably chitin or chitinous, bounded on either side by electron dense layers. The basidiomycetous yeast Malassezia is unusual in having corrugated inner walls (Simmons and Ahearn 1987). Septa, with rare exception, are perforate. Clamp connections are a common feature of dikaryotic hyphae (secondary and tertiary mycelium). Basidiocarps are composed of tertiary mycelium. 3.3.2. Septa: The basidiomycetes, from the evidence of morphology and molecular biology, are a natural group (Bruns et al. 1992, Suh and Sugiyama 1994, Swann and Taylor 1995b). Septa in several orders are characterized by the dolipore/parenthesome (d/p) complex (Moore 1985, 1996a). Hoch and Howard (1981) have shown that the toroidal swellings of the dolipore septum are an artifact of conventional chemical fixation. Such barrel-shaped swellings are absent in samples that have been quick-frozen and freeze substituted. Nevertheless, these fixation artifacts appear to be reproducible and therefore interpretable within a systematic context (Table 5). Dolipore septa possess three basic structures (Figs. 8B, 9): (1) a barrel-shaped dolipore, (2) occlusions within the pore channel, and (3) parenthesomes on either side that delimit the pore domain. The diameter of the pore channel is 89 to 266 nm (Patton and Marchant 1978) and is occupied by opposing cylindroidal occlusions. In many taxa, the outer portion of the occlusion is homogeneous and electron dense (Oi type: Figs. 8B, 9); in

41

Fig. 9. Summary diagram of the basic variations to be found in dolipore/parenthesome (d/p) septa of the phylum Basidiomycota (from Moore 1985). Particular taxa are generally associated with certain d/p combinations (Moore 1996a): Oj/P] septa occur only in the Hymenomycetes and Gasteromycetes; O1/P2 septa characterize the Clavariomycetes and the monomorphic jelly fiingi (Auriculariales and Exidiales) (Wells 1994); 02l^2,,A,6 septa occur only in the orders Tremellales and Filobasidiales (Table 5); O2/P5 septa are unique to Wallemia sebi (see Moore 1986).

the Tremellales s. str. and Filobasidiales (Moore 1996a) it appears as a striated band (O2 type: Fig. 9). Moore (1985) postulated that the pore results from the final ingrowth of the annulus being physically blocked. The dolipore domain is delimited by parenthesomes (Fig. 9), double membrane septal caps with an intervening line that are differentiated from the endoplasmic reticulum. Depending on the taxonomic group, parenthesomes may be perforate (Pi! Fig. 8B), imperforate (P2), vesiculate (P3-P5), or absent (P6). The several morphologies of the d/p septal complex are diagnostic of specific major taxa (Table 5; Fig. 9). 4. Sexual cycles 4.1. Class Hemiascomycetes 4.1.1. Ascospore formation: Ascospore formation starts with meiosis which, like mitosis, is intranuclear (Moens and Rapport 1971, Peterson et al. 1972, Moens 1974). Ascospore development in the Euascomycetes (Marchant 1979, Mims et al. 1990, van Wyk and Wingfield 1991) and in Schizosaccharomyces octosporus (Czymmek and Hammill 1989) occurs by free cell formation. A similar ontogeny occurs in most budding yeasts, but with some significant differences. An ascal sac is not formed and after meiosis the sibling nuclei do not separate but persist as lobes attached to a central mass of nucleoplasm; each lobe has an SPB that forms internal spindle mt's (Fig. 10). Each SPB becomes associated with a forespore envelope (FSE), a double membrane cupule that comes to enclose its respective lobe. An FSE

42

///. Ultrastructural and molecular properties used for yeast classification

nearly the same density as the primary wall, e.g., Ascoidea (Ashton and Moens 1979), Cephaloascus (Ashton and Moens 1979), Pichia (Bandoni et al. 1967, Black and Gorman 1971), Hanseniaspora (Kreger-van Rij 1977b), and Saccharomycodes (Simmons and Aheam 1985). In Sporopachydermia the secondary wall, uniquely, becomes very thick and irregular (Rodrigues de Miranda 1978, Kreger-van Rij 1978, Simmons and Ahearn 1987). In Debaryomyces hansenii karyogamy generally occurs in the budding isthmus after which only one nuclear lobe, FSE, and subsequent ascospore is formed, while the rest of the nucleus disappears (Kreger-van Rij and Veenhuis 1975a). Nuclear separation prior to FSE formation and primary wall deposition occurs in Ascoidea (Ashton and Moens 1979), Cephaloascus (Ashton and Moens 1979), Dipodascopsis (Curry 1985), Pichia (Black and Gorman 1971), Saccharomycopsis (Kreger-van Rij and Veenhuis 1975b, Ashton and Moens 1979), Schizosaccharomyces (Yoo et al. 1973, 1990), and Taphrina (Syrop and Beckett 1972).

Fig. 10. Summary diagram of ascospore formation in Saccharomyces cerevisiae (from Moens and Rapport 1971). At the start of sporulation (a, b) the SPB replicates and the daughter SPBs move apart (c, d) and generate the primary spindle; (e) the primary SPBs, in turn, replicate when the meiosis I spindle has achieved its maximum length; (f) the resulting pairs of secondary SPBs separate to form a pair of shorter meiosis II spindles. Between stages (f) and (g) two significant events occur: 1) the formation, outside each primary SPB plaque, of secondary SPB plaques along with vesicles that are the anlagen of the forespore envelopes (FSE); 2) the formation of a nuclear bulge forming adjacent to each SPB that enlarges while the central part of the nucleus shrinks, (g) Around each nuclear lobe an FSE forms and increases at the margins (h), following the contours of the nuclear lobes (Guth et al. 1972, Beckett et al. 1973, Moens 1974). (i) The pursing of the FSEs finally isolates the lobes, initiating the ascospores. The excluded central portion of nucleoplasm becomes part of the epiplasm. The primary ascospore wall is deposited in the FSE as the nuclear lobe is being severed and it may become quite thick while there is still a gap in the spore wall.

initially appears as a flattened vesicle just outside the SPB with a lumen of the same density as the rest of the cytoplasm; it soon becomes compressed and filled with a dense matrix (Moens 1971, 1974, Zickler and Olson 1975). The primary ascospore wall is deposited in the FSE as the nuclear lobe is being severed and it may become quite thick. A comparable ontogeny occurs in Wickerhamia fluorescens (Rooney and Moens 1973a,b) and Eremothecium ashhyi (Rosing 1987). The primary ascospore wall layer is electron transparent, smooth, and generally is of uniform thickness. Secondary wall material is deposited on the outside of the primary wall under the outer membrane and is usually electron dense and distinctively patterned (Kurtzman et al. 1972, 1980b, Kreger-van Rij and Veenhuis 1975a, 1976a, Kreger-van Rij 1977a, 1979, Kurtzman and Kreger-van Rij 1976, Mikata and Banno 1987). Sometimes, however, the secondary wall material has

4.1.2. Conjugation: When suspensions of the mating types of Pichia canadensis (synonym Hansenula wingei) are mixed, up to 80% of the cells fuse in pairs (Conti and Brock 1965). The process of agglutination causes considerable wall deformation as maximum cell-to-cell contact is achieved. Subsequently, the cells elongate in the contact region, the walls fuse and then partially dissolve, and plasmogamy occurs. Nuclei move toward the isthmus and quickly fuse on contact. Following karyogamy a bud develops from the conjugation tube; its occupation by the zygote nucleus establishes the teleomorph phase (see Crandall et al. 1977). A similar ontogeny occurs in Saccharomyces cerevisiae (Osumi et al. 1974, Byers and Goetsch 1975, Cross 1988) (Fig. 4: g-1). Conjugation, here and probably in other heterothallic species, requires synchronization of haploid cycles that are regulated by mating substances. SPBs of gametic cells have satellites and extranuclear mt's that, initially, are associated with the developing intercellular connection and, later, with the SPB of each nucleus as they migrate together. SPBs retain their opposing orientation as they lead the nuclei towards the intercellular gap where they meet and fiise. The narrow intercellular opening restricts nuclear passage to the extended, SPB-bearing region. Karyogamy proceeds by the fusion of the two SPBs and contiguous nuclear envelopes. Formation of the fusion SPB marks the end of the prolonged cdc Gi arrest, coincident with conjugation, and is followed by SPB duplication as in a typical cell division. The first bud of the diplophase usually emerges from the fusion site. In Saccharomycopsis (Guilliermondella) selenospora (Kreger-van Rij and Veenhuis 1976a), conjugation tubes from different hyphae fuse at their tips and karyogamy occurs in the channel; subsequently a new wall is formed in the channel and the parent cells become asci.

5. Cytology and ultrastructure of yeasts and yeastlike fungi / R.T. Moore

4.2. Phylum Basidiomycota Species that produce highly diverse basidiocarps are made up of tertiary myceUa, specialized hyphae that have the characteristic dolipore/parenthesome septal complex. Meiosis occurs in basidia that may, after division, remain entire (holobasidia) or become variously septate (phragmobasidia). Generally four ballistosporic basidiospores are produced on basidia but in some taxa (i.e., Gasteromycetes, Filobasidiales) spores are passively released. Members of the Uredinales are highly evolved plant parasites and have complex life cycles with as many as five spore stages. Teliospore germination produces a metabasidium which, after meiosis, becomes a fourcelled phragmobasidium. Dikaryotic mycelium of the rusts lacks clamp connections, is generally intercellular, and is limited to parts of leaves and other aerial organs of the host; basidiocarps are not formed. Sorus and spore ontogeny are determinant and regular (Hiratsuka and Sato 1982). Teliospores in several orders are formed from dikaryotic hyphae; initially binucleate, they become diploid by maturity. During germination the diploid nucleus may divide mitotically before it or a sibling nucleus moves into a metabasidium and undergoes meiosis. Ontogeny of thin-walled teliospores in Rhodosporidium toruloides (Johnson-Reid and Moore 1972, Abe et al. 1977) is interpreted as follows: clamp-like hookcells emerge near septa as outgrowths on a broad base and develop into crozier-like, double clamp configurations in which the penultimate cells, after further development, become

Fig. 11. Teliospore formation above a hookcell in Rhodosporidium (from Johnson-Reid and Moore 1972). The spore forms from a penultimate cell in a "crozier" over "clamp" system in which the hookcell ("clamp") is the antipenultimate cell that later fuses with the ultimate cell (see Fig. 12D/E). Bar = 2.5|J,m.

43

Fig. 12. Interpretation of teliospore formation in Rhodosporidium, original drawing based on Seyfert (1927) and Johnson-Reid and Moore (1972): (A-B) terminal hookcell type that mimics crozier formation (see Banno 1967); (C-E) lateral double-clamp or hookcell-("crozier")-onclamp type.

teliospores (Fig. 11); teliospores may also be formed from apical crozier-like cells. A diagrammatic interpretation of teliospore development is given in Fig. 12. Similar teliospore ontogenies appear to be present in Leucosporidium (Moore 1972), Rhodosporidium (Kondoa) malvinellum (Fell 1970b, Yamada et al. 1989a), and Sporidiobolus pararoseus (de Hoog and Boekhout 1982). Teliospore germination usually starts with a mitotic division in which one nucleus remains in the spore while the other enters the developing basidium (Zundel 1953); iterations of this ontogeny probably explains the formation of additional basidia (Fischer and Holton 1957, Christensen 1963, Duran and Safeeula 1968, Ingold 1983). Exceptions have been reported in Tilletia: Goates and Hoffman (1987) found that meiosis in several species occurred within the teliospores before the metabasidium emerged. Therrien et al. (1988) also found that teliospores of Tilletia indica were multinucleate at the time of germination. The order Ustilaginales (smuts) is characterized by metabasidia that become septate after meiosis. The basal cell of the phragmobasidium occupies the teliospore; the basidiospores (also called sporidia) generated from each cell usually arise near a septum. Meiosis in Ustilago maydis (O'Donnell and McLaughlin 1984a, O'Donnell 1992) is similar to that reported for other basidiomycetes (Uredinales excepted). In Exobasidium (Blanz 1978, Mims et al. 1987), basidial initials develop within the dikaryotic stroma and give rise to lateral, uninucleate holobasidia on the lower leaf surface. After meiosis four to seven sterigmata develop per basidium. The tip of each sterigma enlarges into a basidiospore which remains attached abaxially; a hilar appendix body and discharge droplet are not produced. Instead, basidiospores are passively released and grow in a yeastlike manner (Mims and Richardson 1987, Mims et al. 1987). 4.3. Phylum Ustomycota Moore (1972, 1987b, 1988a, 1996a-d, 1997) proposed

44

///. Ultrastructural and molecular properties used for yeast classification

that there are basic phylogenetic differences between the rusts and the smut fungi and assigned the latter group to the phylum Ustomycota. Although the phylum

Ustomycota has not been adopted in this book, readers may become famihar with this alternative system of classification by consulting the foregoing references.

Chapter 6

Chemotaxonomy based on the polysaccharide composition of cell walls and capsules H.J. Phaff Contents

mainly confined to the bud scar areas of the wall and thus the proportion of chitin varies with the number of daughter 1. Introduction 45 cells that have been produced (Cabib 1981). 2. Ascomycetous cell envelopes 45 The remaining major component of the cell wall of 3. Basidiomycetous cell envelopes 46 these yeasts is a glucomannan-protein complex (Ballou 4. Capsular polysaccharides 47 1976). More recently. Van Rinsum et al. (1991) and Montijn et al. (1994) have explored the attachment of the 1. Introduction glucomannoproteins to the other polysaccharides of the Comparison of the composition of polysaccharides that cell wall. Theirfindingsshow that the glucomannoproteins make up the cell wall and capsule of capsulated yeasts has contain (3-(l ^6)-linked glucose-containing side chains had a significant impact on the systematics and phylogeny (in addition to the already known N- and 0-linked chains) of yeasts. Such information has proven to be of value to the protein moiety of the mannoprotein. Evidence mainly at the generic and suprageneric level. Only a presented suggests that the glucose-containing side chains small number of species of yeasts has been investigated might be extended with P-(l -^3)-linked glucose chains in depth with regard to the constituent monosaccharides that could interweave with the p-(l —>3)-glucan fibrils and derivatives, and even fewer studies have focused on in the wall and thus anchor the glucomannoproteins. the structural details of their constituent polysaccharides. Presumably this linkage is eliminated during the extraction The cell wall composition of additional species is often procedures of the glucomannoprotein. inferred from information obtained with related species. Significant differences in the carbohydrate moiety have Historical reviews on the development of our knowl- been demonstrated, particularly in the mannan side chains edge of the yeast cell envelope have been published by of the branched molecule (Ballou 1976, 1982). Selective Phaff (1971, 1977), Fleet and Phaff (1981), Fleet (1984, acetolysis has played a major role in the elucidation 1985, 1991), Golubev (1991a), Cabib (1981), and Cabib of yeast mannan structure (Kocourek and Ballou 1969, et al. (1984). An excellent review on the assembly of Ballou 1976). With controlled acetolysis, the a-(1^6) the various cell wall components of yeasts was recently linkages of the mannan backbone are selectively cleaved, published by Klis (1994). Most information based on and the oligosaccharides thus formed (representing the chemical analyses has been derived from studies of cell mannose side chains including one mannose residue origwalls from Saccharomyces cerevisiae and a few related inally part of the backbone) can be separated according ascomycetous species. It is often assumed that other to size by gel filtration. The elution pattern appears to be multilaterally budding ascomycetous yeasts have a similar reproducibly characteristic of a particular yeast species, composition, although there is evidence from studies thus providing a "fingerprint" of this mannan. with cell wall lytic enzymes that there are quantitative The molar ratios of the various oligosaccharides can as well as structural differences among the component be determined from the areas under the elution peaks. polysaccharides of different species (Tanaka et al. 1966). A comparison of elution patterns (fingerprints) of a significant number of species has shown that this approach can 2, Ascomycetous cell envelopes constitute a usefiil parameter in yeast taxonomy. Although Ascomycetous budding yeasts contain an alkali-insoluble this method provides information on the proportion and acid-insoluble (3-(l-^3)-glucan as the major structural size of the oligosaccharide side chains in various mannans, component. Associated with this polysaccharide is a it does not reveal without fiirther analysis the types and low proportion of an alkali-insoluble acid-soluble highly distribution of the linkages between the mannose units in branched (3-(l -^ 6)-glucan and an alkali-soluble |3-(1 -^ the side chains. 3)-glucan with a significant number of P-(l ^6)-bonds Another approach to thefingerprintingof mannans was in its branched structure (see Fleet and Phaff 1981) for developed by Gorin and Spencer (for a comprehensive structural details). There is a very low chitin content review see Gorin and Spencer 1970). They determined in ascomycetous, multilaterally budding yeasts, which is and compared proton magnetic resonance spectra of 45

46

///. Ultrastructural and molecular properties used for yeast classification

isolated mannans from a large number of yeast species. These spectra provided sensitive criteria for distinguishing mannans of different species or for showing their similarity. At 70°C the H-1 and DOH signals give complex patterns in the x 4.0-5.0 region. The chemical shifts of the H-1 proton signals depend on the structure of the parent anhydrohexose unit, the position(s) substituted in the unit, the structure of the substituent unit, the structure of the aglycone unit if one is present, and the position(s) substituted in such an aglycone unit. With this technique, a large number of water-soluble mannosecontaining polysaccharides could be distinguished. Gorin et al. (1969b) concluded that polysaccharides with similar proton magnetic resonance spectra have related chemical structures, and thus mannans from different yeast species that produce similar or identical spectra indicate that these species are closely related. This technique has been helpful in confirming or rejecting postulated anamorphs and teleomorphs of the same species (Manachini 1979), and in establishing tentative groups of seemingly related species in heterogeneous asexual genera such as Candida (Spencer and Gorin 1969a). Proton magnetic resonance spectra have also been used (a) to evaluate various types of evidence for proposed phylogenetic lines in Pichia (synonym Hansenula) species (Spencer and Gorin 1969b), (b) to obtain presumptive evidence for the occurrence of |3 linkages in the side chains of mannans, resulting in distinctive H-1 signals at a higher field than t 4.55 (Gorin et al. 1969a), and (c) to detect sugars other than mannose in the mannans (Gorin and Spencer 1968). As mentioned briefly above, multilaterally budding ascomycetous yeasts contain about 1-2% chitin that is confined almost entirely to the bud scar areas. However, a small percentage (around 0.1%) is located throughout the lateral walls (Molano et al. 1980, Roncero et al. 1988a,b). Most of the evidence is based on studies with S. cerevisiae and it is assumed that other budding ascomycetous yeast species have a similar chitin distribution. In contrast, budding yeasts of basidiomycetous affinity, for example in species of the basidiomycetous anamorphs Cryptococcus, Rhodotorula, and Sporobolomyces (BartnickiGarcia 1968), have a much higher chitin content (up to approximately 10%) and this form of chitin is present as microfibrils and not concentrated as granular chitin in bud scar zones. The chitin content of walls of filamentous ascomycetes is significantly higher than in S. cerevisiae, e.g., in species of Saccharomycopsis and the euascomycete Eremascus. The chitin content of hyphal forms of Candida albicans has been found much higher than that in the budding form of that species. The chitin content of species of the bipolarly budding genus Nadsonia is much higher than that of species of the genera Hanseniaspora and Saccharomycodes, suggesting that Nadsonia is not closely related to the last two genera (reviewed by Phaff 1971, Fleet 1991). Ribosomal RNA comparisons also suggest Nadsonia to be only distantly related to the other two

genera (Kurtzman and Robnett 1994a). It should be added that detailed knowledge about the chitin content of species of most yeast genera is still lacking or incomplete, making its significance to yeast systematics uncertain. The cell wall composition of the fission yeast Schizosaccharomyces differs in several major respects fi*om that of the budding ascomycetous yeasts. Earlier conclusions that species of this genus do not contain chitin have proven to be incorrect. Sietsma and Wessels (1990) reported a small proportion (0.5%) of the dry weight of the wall) of a partially acetylated glucosaminoglycan, that is covalently linked to P-(l ^3)-glucan of the wall. Treatment of the walls with chitinase greatly decreased the content of alkali-insoluble P-(l -^ 3)-glucan and increased the fraction of alkali-soluble P-(l -^ 3)-glucan, suggesting that the chitinous fraction of this yeast is bound to the alkaliinsoluble P-(l -^ 3)-glucan component. These authors also demonstrated the presence of a chitin synthase in a membrane fraction of S. pombe. Further characterization of the chitin synthase gene of S. pombe has been reported by Bowen et al. (1992). Species of Schizosaccharomyces contain in addition to the P-glucans of the budding yeasts another major structural polysaccharide, i.e., a-(l -^ 3)-glucan, which is soluble in alkali (Bacon et al. 1968, Meyer and Phaff 1980). The mannan component of Schizosaccharomyces is also different from that of the budding yeasts in that it has single galactose units attached to the backbone rather than oligomannose chains (Ballou 1976). The fission yeasts thus have a unique cell wall composition and do not appear closely related to any other group of ascomycetous yeasts, an observation consistent with comparisons of rRNA (Kurtzman and Robnett 1994a). It should be pointed out that the occurrence of a-(l —>3)-glucan in Schizosaccharomyces is not unique, because it is also found as a major cell wall component in Cryptococcus and Phaffia (Bacon et al. 1968, Meyer and Phaff 1977) and in numerous species of filamentous fimgi (Fleet and Phaff 1981), but this polysaccharide appears lacking in Rhodotorula species (Meyer and Phaff 1977). The presence of unusual sugars or sugar derivatives in the cell wall has had a large impact on the systematics of yeasts at the generic or suprageneric level. As mentioned above, the genus Schizosaccharomyces is characterized by the occurrence of galactomannan in the wall. Weijman (1977) compared the cell wall composition of Dipodascus and Dipodascopsis and found that the monotypic genus Dipodascopsis contains glucuronic acid in the cell wall but this uronic acid is absent in Dipodascus spp. This finding supports the separation of Dipodascopsis from Dipodascus. 3. Basidiomycetous cell envelopes The presence or absence of D-xylose in the cell envelope or whole cell extracts also has had an important bearing on yeast systematics at the generic level. Von Arx and Weijman (1979) placed yeast species of heterobasidiomycetous

6. Chemotaxonomy based on the polysaccharide composition of cell walls and capsules / H.J. Phaff

affinity (based on mode of bud formation) in two families depending on the presence or absence of D-xylose. The Sporobolomycetaceae (lacking xylose and frequently containing fucose) included species of Rhodotorula, Rhodosporidium, Sporobolomyces, and some species of Candida. The Filobasidiaceae (containing xylose and usually glucuronic acid) included species of Bullera, Cryptococcus, Filobasidium, Phaffia and some species of Candida and Trichosporon. Later, Weijman and Rodrigues de Miranda (1983) reported xylose in the majority of Bullera species, but a few Sporobolomyces species also contained xylose. No definitive steps for reclassification of the nonconforming species were taken by these authors. Subsequently, Suzuki and Nakase (1988a) established by a more sensitive analytical technique that xylose was lacking in Bullera salicina and Bullera tsugae, and Nakase and Itoh (1988) transferred these two species to the genus Sporobolomyces. Nakase and Suzuki (1986c) confirmed the finding by Weijman and Rodrigues de Miranda that Sporobolomyces puniceus contains xylose in the cells and they transferred this species to the genus Bullera as B. punicea comb. nov. These new combinations emphasize the lesser importance of ballistospore morphology and other minor morphological details in the systematics of these genera as compared to chemotaxonomic and other molecular criteria such as Co-Q (Nakase et al. 1991a). Studies on the presence of unusual sugars and sugar derivatives in cell walls have also given support for the separation of species in the genera Candida and Trichosporon with ascomycetous and basidiomycetous affinity (von Arx and Weijman 1979, Weijman and Rodrigues de Miranda 1988). Sugiyama et al. (1985), in their study of the genera Rhodosporidium, Leucosporidium, Cystofilobasidium, Filobasidium, and Filobasidiella, emphasized the importance of the presence of xylose in dividing the species into two major groups. An important criterion of relating the carotenoidcontaining new genus Saitoella to the ascomycetes, was the absence of xylose in the cells (Goto et al. 1987a). In spite of the many useful results referred to above, it should be emphasized that the carbohydrate composition of the yeast cell envelope is not a decisive criterion by itself in yeast systematics, but is valuable only in

47

combination with other chemotaxonomic and molecular approaches, including ribosomal DNA sequence analysis. Such a polyphasic approach has been advocated by a number of authors for a reliable taxonomic system. 4. Capsular polysaccharides The composition of capsular polysaccharides (Golubev 1991a) has also been found usefiil as an aid in yeast systematics. Early studies on the slimy phosphomannans found in certain species of Pichia (Hansenula spp.) pointed to their common ancestry (Wickerham and Burton 1962). The presence of a linear mannan with alternating P - ( l - ^ 3 ) - and p-(l-^4)-bonds in some Rhodotorula species and an acidic heteropolysaccharide containing xylose, mannose and glucuronic acid in Cryptococcus, has supported the transfer of several species of Rhodotorula to Cryptococcus (Phaff and Spencer 1969) and has established a relationship between Cryptococcus and the heterobasidiomycetous genus Tremella (Slodki et al. 1966). It has been suggested by Slodki and Wickerham (1966) that the lack of D-galactose in the capsule of Lipomyces lipofer would be a useful criterion to separate this species from L. starkeyi, because these species are difficult to separate on the basis of the usual assimilatory reactions. However, as pointed out by Phaff and Kurtzman (1984), mutations have been reported where a capsulated strain of L. lipofer changed into a microcapsulated variant with a much higher galactose content (Gorin et al. 1978). The same authors also found that an occasional strain of L. tetrasporus contained an unusually low level of galactose in its capsule, making the differentiation between L. tetrasporus and L. lipofer difficult on this basis. Another complication in the use of chemical composition of capsular material in yeast systematics is the problem of purity of the preparation to be analyzed (Golubev 1991a). Because of the difficulty of separating capsular polysaccharides from exocellular, excreted polysaccharides and fragments of cell walls, there appears to be doubt that at least some of the literature reports were based on sufficiently purified capsular preparations.

This Page Intentionally Left Blank

Chapter 7

Electrophoretic comparisons of enzymes M. Yamazaki, C.P. Kurtzman and J. Sugiyama Contents 1. 2. 3. 4. 5. 6.

Introduction Commonly used methods Preparation of cell-free extracts for electrophoresis Enzymes commonly compared Data analysis Resolution of taxa

(e.g., B. Braun, Melsungen, Germany) using a coolant such as liquid CO2. After treatment, insoluble debris and unbroken cells are removed by centrifugation, and the liquid supernatant is used directly for electrophoretic analyses of enzymes (Sidenberg and Lachance 1983, 1986, Smith et al. 1990b, Yamazaki and Komagata 1981). The electrophoretic apparatus often used is for vertical slab gels. Polyacrylamide gels have been used by Davis (1964), Sidenberg and Lachance (1983, 1986) and Yamazaki and Komagata (1981), but starch gels also give good results (Baptist and Kurtzman 1976, Nealson and Garber 1967, Royse and May 1982, Singh and Kunkee 1977, Zamir and Chet 1985). Further details may be found in the work of Bonde et al. (1993) and Micales et al. (1986).

49 49 49 49 49 50

1. Introduction The differences in amino acid sequences found among enzymes of different organisms is a reflection of organismal genetic divergence. Amino acid substitutions can often be detected from the extent of migration shown by enzymes on electrophoretic gels and the visualized patterns are termed zymograms. Electrophoretic comparisons of enzymes have been used to study taxonomic relationships among molds and mushrooms (Blaich and Esser 1975, Jones and Noble 1982, Micales et al. 1986, Nasuno 1971, Nealson and Garber 1967, Okunishi et al. 1979, Royse and May 1982, Schmidt et al. 1977, Stout and Shaw 1973, 1974, Sugiyama and Yamatoya 1990, Toyomasu and Zennyozi 1981, Yamatoya et al. 1990, Zambino and Harrington 1992, Zamir and Chet 1985) as well as among yeasts and yeastlike fungi (Baptist and Kurtzman 1976, Sidenberg and Lachance 1983, 1986, Smith et al. 1990b, Yamazaki and Goto 1985, Yamazaki and Komagata 1981, 1982a,b). The focus of our review is to examine the extent of genetic resolution provided by electrophoretic comparisons of enzymes and the use of this technique for solution of taxonomic problems among yeasts.

4. Enzymes commonly compared The staining procedures for detection of enzymes in electrophoretic gels have been described by Siciliano and Shaw (1976). Yamazaki and Goto (1985), Yamazaki and Komagata (1981, 1982a,b, 1983a,b), and Yamazaki et al. (1982, 1983, 1985) compared the following enzymes: fructose-1,6-bisphosphate aldolase (EC 4.1.2.13), hexokinase (EC 2.7.1.1), phosphoglucomutase (EC 2.7.5.1), alcohol dehydrogenase (EC 1.1.1.1), lactate dehydrogenase (EC 1.1.1.27), malate dehydrogenase (EC 1.1.1.37), 6phosphogluconate dehydrogenase (EC 1.1.1.41), glucose6-phosphate dehydrogenase (EC 1.1.1.49), glutamate dehydrogenase (EC 1.4.1.4), fumarase (EC 4.2.1.2), esterase (EC 3.1.1.1), catalase (EC 1.11.1.6) and tetrazolium oxidase. These enzymes were chosen because they play important roles in the metabolism of yeasts. The enzymes superoxide dismutase (EC 1.15.1.1), alkaline phosphatase (EC 3.1.3,1), a-glucosidase (EC 3.2.1.20), P-glucosidase (EC 3.2.1.21), and exo-P-glucanase (EC 3.2.1.58) were examined by Sidenberg and Lachance (1983, 1986).

2. Commonly used methods Different electrophoretic techniques, including starch gel electrophoresis, polyacrylamide gel electrophoresis (PAGE), and isoelectric focusing, can be used. Although gel support media differ, PAGE generally gives good separation and repeatability for yeasts. Advantages of the different methods of electrophoresis have been discussed by Murphy et al. (1990). The method used will often be determined by availability of equipment and expertise.

5. Data analysis The application of electrophoretic data in systematic studies has been discussed in detail by Buth (1984) and Murphy et al. (1990). After staining, gels are dried under a vacuum with warming, and the relative mobilities of the enzyme bands are calculated as the ratio of the distance that the enzymes move from the origin to the distance that the tracking dye moves (Yamazaki and Komagata 1981).

3. Preparation of cell-free extracts for electrophoresis Cells can be disrupted with a mechanical cell homogenizer 49

50

///. Ultrastructural and molecular properties used for yeast classification

Similarity values for the electrophoretic patterns of the enzymes are calculated by the formula

ubiquinone structure, PMR spectra of mannans, and serological reactions. The 50 strains of D. hansenii examined were classified into three groups (I, II, III) based on VoS = NS/(NS + ND) X 100, nDNA reassociation (Price et al. 1978). Group I consisted with S = similarity value; NS = number of enzymes show- of two subgroups, la and lb, which are considered to ing identical mobilities; ND = numbQY of enzymes show- represent two distinct varieties. The first and second groups of Yamazaki and Komagata (1982a) corresponded ing different mobilities. Similarity for each enzyme is calculated by the to subgroup la and group III, respectively. These groups and subgroups could be discriminated from one anfollowing formula: other by maximum growth temperature, assimilation of VoS = 2NAB/{NA+NB) x 100, propylene glycol, and electrophoretic patterns of glucosewith iS = similarity value; NAB = XhQ number of enzyme 6-phosphate dehydrogenase and malate dehydrogenase. bands with identical relative mobilities; NA = X\iQ number Debaryomyces coudertii and D. mamma, which resemble of enzyme bands of strain A; NB = X\iQ number of D. hansenii, were distinguished from each other and enzyme bands of strain B (e.g., Hamamoto et al. 1986a). from strains of groups I, II and III by electrophoretic Clustering is achieved by means of the unweighted- patterns of the preceding two enzymes. On the basis of average linkage technique by the method of Sneath and this information, groups I, II and III, and subgroups la and lb were taxonomically described by Nakase and Sokal (1973). Sidenberg and Lachance (1983, 1986) used reciprocal Suzuki (1985b). Kurtzman and Robnett (1991) and Yamada et al. averaging to ordinate the strains as a function of correlated electromorphs. The amount of information provided by (1991a) estimated evolutionary affinities among species each enzyme is evaluated by the following measure of of Debaryomyces from partial rRNA (18S and 26S) gene sequences. Their phylogenetic studies showed that entropy (/y): D. hansenii, D. coudertii, D. marama, and D. nepalensis Ij = [n X tj X In tj) are closely related. These results are congruent with n data from other chemotaxonomic comparisons, including zymograms and nDNA relatedness, which suggest the four taxa to be biologically separate members of a closely where n is the number of strains, tj is the total number related species complex. of different electromorphs for the yth enzyme, and ay is the number of electromorphs of that enzyme present 6.1.2. Kluyveromyces: Species of the genus Kluyuerin the /th strain. The results are expressed in a matrix omyces have been compared with respect to enzyme having the dimensions n xp, where n strains are described patterns and nuclear DNA relatedness. The type strains by the presence (scored as 1) or absence (scored as of 20 phenotypically defined species of Kluyveromyces 0) of each of p electromorphs. Reciprocal averaging is were examined by gel electrophoresis of 11 isofunctional used to ordinate rows and columns of a frequency matrix enzymes (Sidenberg and Lachance 1983). Polymorphisms and simultaneously reveals correspondences between two were evident in most of the enzymes studied. Each type strain had a unique pattern when all enzymes kinds of information (i.e., strains and electromorphs). were considered. The results of a multivariate analysis of the electrophoretic patterns supported the division 6. Resolution of taxa of the genus into 13 species. Enzyme electrophoresis In this review, selected groups of taxa are compared provided evidence that widespread gene flow does not with respect to their isozyme profiles and their extent of occur between yeasts which are able to hybridize in the nucleic acid divergence. By this approach, perspective is laboratory. Additionally, Sidenberg and Lachance (1986) added to the resolution offered from use of the different described the results of an electrophoretic characterization techniques. of seven enzymes to assess the degree of variability within the Kluyveromyces marxianus complex and to determine 6.1. Ascomycetous yeasts the taxonomic relationships of these populations based 6.1.1. Debatyomyces: Yamazaki and Komagata (1982a) on reproductive isolation as it appears to have occurred examined the electrophoretic patterns of 10 enzymes in nature. Some strains of Candida considered to be of Torulopsis Candida {= Candida famata), a species anamorphs of Kluyveromyces as well as one strain each then regarded as the anamorph of both Debaryomyces of C sake, Saccharomyces cerevisiae and Pichia fluxuum, hansenii and D. mamma, and found that strains of were also examined. The enzyme patterns readily subT. Candida fell into three groups. Nakase and Suzuki stantiated the relationships between putative anamorphs (1985a,b) compared phenotypically similar strains of and teleomorphs and the nonmember status of strains D. hansenii and related yeast taxa with respect to DNA not belonging to the genus. A multivariate analysis of base composition, nuclear DNA (nDNA) reassociation. the enzyme patterns indicated that isolates belonging to

7. Electrophoretic comparisons of enzymes / M. Yamazaki et al.

51

_CBS 74* D. hruxellensis 78 LCBS 96 3025 LCBS 75* B. lamhicus 97 D. hruxellensis 2796 D. intermedia I CBS 98 D. hruxellensis 72* JS. hruxellensis I CBS 4914* D. intermedia 1940 J5. intermedius % Similarity [CBS 2336 4459 J CBS 6055* J5. ahstinens D 0 - 19% 73* B. intermedius 2 0 - 39% I CBS 5513 D. intermedia 1 CBS 5512* B. custersii 4 0 - 59% ICBS 5206 B. lamhicus 6 0 - 79% LCBS 8027 JB. intermedius 8139* D. anomala 8 0 - 100% LCBS 8138 1947 D. intermedia LCBS 77* i5. anomalus 3026 LCBS 4210 5111 LCBS 76* B. claussenii HJCBS

1938

4608 I CBS 4711 4460 4805* B. custersianus 5207 6042* B. naardenensis 6041 CBS 6040 CBS 1945* E.nana CBS 1955 CBS 1956

Fig. 13. Similarity of strains of Brettanomyces, Dekkera and Eeniella based on relative electrophoretic mobilities of five cellular enzymes (Smith et al. 1990b).

K. lactis and K. marxianus DNA reassociation groups are not phenotypically continuous with one another. Results from studies of nuclear DNA reassociation demonstrated the same species groups within Kluyveromyces as defined from the preceding electrophoretic comparisons (Fuson et al. 1987, Vaughan-Martini and Martini 1987b). 6.1.3. Brettanomyces/Dekkera/Eeniellai Smith et al. (1990b) examined the taxonomic status of various species of the teleomorphic genus Dekkera and the anamorphic genera Brettanomyces and Eeniella by electrophoretic comparison of five enzymes (Fig. 13), with respect to nDNA relatedness (Table 6), and with respect to physiological reactions. Enzyme patterns demonstrated the presence of two Dekkera species [D. anomala with anamorph B. anomalus (=B. claussenii), D. hruxellensis (=D. intermedia) with anamorph B. hruxellensis] and three Brettanomyces species [B. hruxellensis (=B. ahstinens, B. custersii, B. intermedius, B. lamhicus), B. custersianus and B. naardenensis] that were recognized from low (0-29%) similarity values. Strains of each species (except D. hruxellensis) showed similarity values of 80-100%. D. hruxellensis strains were divided into two clusters: one cluster has a high similarity value (85100%) while strains of the second cluster showed a

similarity value of 38-70%). Using the guideline that strains with a similarity level of 40% and greater belong to the same species (Hamamoto et al. 1986a), the two clusters were considered conspecific. Eeniella nana showed a unique enzymic pattern that differed from other Brettanomyces and Dekkera species (0-5% similarity). Results from nDNA reassociation supported the conclusions drawn from electrophoresis of enzymes because strains within each taxon showed 70% or greater complementarity. More recently, Boekhout et al. (1994) determined partial nucleotide sequences (ca. 600 nucleotides) of a divergent domain near the 5' end of the 26S rDNA gene for species of Dekkera (anamorph Brettanomyces), Hanseniaspora (anamorph Kloeckera) and Eeniella to reconstruct the phylogenetic relationships of these taxa. As shown in Fig. 14, monophyly of the Dekkera/ Brettanomyces/Eeniella clade is strongly supported by a high bootstrap value (100%o), as is the branch supporting D. anomala and D. hruxellensis. However, the branching order for B. naardenensis, E. nana and B. custersianus is only weakly resolved (51%)). Taxonomic conclusions based on comparisons of enzyme patterns (Fig. 13), nDNA relatedness (Smith et al. 1990b, Table 6) and partial 26S rDNA sequence divergence (Fig. 14) are generally complementary.

52

///. Ultrastructural and molecular properties used for yeast classification Table 6 Extent of nDNA reassociation among strains of Brettanomyces and Dekkera

Species

Strain no.

Percent DNA relatedness D. anomala CBS 8139^

Dekkera anomala

CBS 8139

Brettanomyces

CBS 77^ CBS 7250

100 100

D. bruxellensis

CBS 74^

18

B. bruxellensis

CBS 72^

D. intermedia

anomalus

CBS 4914 CBS 1947

B. intermedius

CBS 73^

B. claussenii

CBS 76^

7 99 100 100

B. custersianus

CBS 4805

23

B. custersii

CBS 5512

B. lambicus

CBS 75^

100 100 24 100

24

99

CBS 5206 CBS 6042

D. intermedia CBS 4914^

100

CBS 4068

B. naardenensis

D. bruxellensis CBS 74^

16

16

^ Type strain.

6.2. Basidiomycetous yeasts 6.2.1. Rhodosporidium/Rhodotorula/Erythrobasidium/ Cystofilobasidium: Yamazaki and Komagata (1981) used slab gel electrophoresis with specific staining for seven enzymes to compare 108 strains belonging to the genera Rhodotorula and Rhodosporidium. Subsequently, their data were analyzed numerically (Hamamoto et al. 1986a). Strains with coenzyme Q-10 were divided into six clusters, strains with coenzyme Q-9 separated into two clusters, and strains with coenzyme Q-8 were assigned to two clusters. At ca. 60% or greater similarity, strains of the teleomorphic species Rhodosporidium diobovatum, R. sphaerocarpum, R. dacryoidum, R. malvinellum, and R. infirmominiatum segregated into species-level clusters. Among these species, the extent of intraspecific

nDNA relatedness (R. malvinellum was not compared) was high (64-99%). Consequently, nDNA complementarity, type of ubiquinones, and similarity of enzyme patterns (see Hamamoto et al. 1987) argue that the preceding taxa represent well-defined species. Divergent enzyme patterns have served to signal phylogenetic diversity among other red yeasts. For example, three strains of R. lactosa divided into two groups based on their ubiquinone systems (Yamada and Kondo 1973), enzyme patterns (Yamazaki and Komagata 1981) and DNA base composition (Hamamoto et al. 1986b). The new species Rhodotorula hasegawae was proposed by Yamada and Komagata (1983) for one strain of R. lactosa having coenzyme Q-10(H2). Subsequently, Hamamoto et al. (1988a) found that the species produced a holobasidium from a single cell without prior mating, and described I— Saccharomyces cerevisiae it in the new teleomorphic genus Erythrobasidium which was tentatively placed in the Filobasidiaceae. Recently, - Dekkera (Bre.) bruxellensis Sugiyama and Suh (1993), Suh and Sugiyama (1994) and I—100-H Suh et al. (1993a) have suggested that E. hasegawianum - Dekkera (Bre.) anomala occupies an unusual position within the basidiomycete •51Brettanomyces naardenensis lineage having simple septa as defined by Swann and Taylor (1995b). In another example, the anamorphic —100Eeniella nana species Rhodotorula sinensis showed ca. 60% similarity Brettanomyces custersianus to Rhodosporidium infirmominiatum. Extent of relatedness between this taxon and species of Cystofilobasidium, • Hanseniaspora valbyensis as determined from similarity of isozymes, is shown Fig. 14. Phylogenetic tree showing relationships among species of in Fig. 15 (Hamamoto et al. 1986a,b, 1988b). The Brettanomyces, Dekkera and Eeniella. The tree was calculated using relationships depicted are strongly supported by partial the branch-and-bound option of the program PAUP 3.1.1 and based on rRNA sequence comparisons (Yamada and Kawasaki ca. 600 nucleotides from the 5' end of 26S rDNA (recalculated from the 1989a, Fell et al. 1992). data of Boekhout et al. 1994). Numbers indicate bootstrap values.

7. Electrophoretic comparisons of enzymes / M. Yamazaki et al.

# .e^"

53

Similarity Value 100 1

90

80

70

60

50

40

30

20

•

1

1

1

1

1

1

1

1C 1

230 1

Cystofilobasidium capitatum

Rhodotorula sinensis

YK165 YK241 YK242

Rhodosporidium infirmominiatum

H

YK240

1-2

YK243 YK236 YK239

Cystofilobasidium bisporidii

YK238 YK237

Fig. 15. Dendrogram calculated from similarity values of the electrophoretic mobilities of enzymes from species in the genera Rhodosporidium, Cystofilobasidium and Rhodotorula having coenzyme Q-8 (Hamamoto et al. 1986a).

6.2.2. The Sterigmatomyces complex: Yamada and The three species of Fellomyces (F. fuzhouensis, Banno (1984a) and Yamada et al. (1988a,b) reassigned F penicillatus, F polyborus), and Kurtzmanomyces species classified in Sterigmatomyces to four anamorphic nectairei, formerly classified in Fellomyces, had quite genera having the following characteristics: different enzyme patterns (0% similarity). Furthermore, - Sterigmatomyces: separation of buds at mid-sterigma, the similarity between K. nectairei and Sterigmatocoenzyme Q-9, cellular xylose absent. sporidium polymorphum was only 14%). The extent of - Tsuchiyaea: separation of buds at mid-sterigma, coen- nDNA relatedness among Fellomyces species ranged from zyme Q-9, cellular xylose present. 0-8%o, indicating that all of these taxa are genetically - Kurtzmanomyces: distal separation of buds from the separate species. Similar low levels of nDNA relatedness were detected between Fellomyces species, K. nectairei, sterigma, coenzyme Q-10, cellular xylose absent. - Fellomyces: distal separation of buds from the sterigma, and S. polymorphum, a species whose anamorph is typical of the genus Fellomyces. Comparisons of enzyme patterns coenzyme Q-10, cellular xylose present. It is unclear from phenotypic data whether species and nDNA relatedness showed that Sterigmatomyces assigned to the preceding genera and the teleomorphic fuzhouensis and S. tursiopsis are conspecific. genus Sterigmatosporidium are biologically distinct. YaGueho et al. (1990) examined relationships among mada et al. (1986a,b) examined genealogical relationships species in the preceding genera with respect to seamong these genera using numerical analysis based on the quence comparisons of selected regions of small (18S) similarities of electrophoretic patterns of seven enzymes. and large (26S) subunit rRNAs. Their sequence data All strains of Sterigmatomyces elviae, S. halophilus, support the concept of Yamada and Banno (1984a) and Sterigmatosporidium polymorphum compared gave a and Yamada et al. (1988a,b) that Sterigmatomyces, uniform enzyme pattern within their respective species. Fellomyces, Tsuchiyaea and Kurtzmanomyces represent Strains of S. halophilus showed 43% similarity with separate genera. The molecular data also indicate that strains of S. indicus. The similarity between S. elviae the genus Fellomyces is closely related to the teleoand S. halophilus was only 14%. Kurtzman (1990a) morphic genus Sterigmatosporidium. The only point of addressed the question of species separation among this doubt concerns Tsuchiyaea wingfieldii which invariably group of taxa from the perspective of nDNA relatedness. clusters closely with Filobasidiella neoformans in rRNA Consistent with the preceding electrophoretic comparison analyses. of Sterigmatomyces, only S. halophilus and S. indicus In conclusion, the extent of genetic resolution derived showed more than low levels of nDNA relatedness. from electrophoretic comparisons of selected enzymes S. halophilus and S. indicus had nearly 100%) nDNA generally parallels results from nDNA reassociation. relatedness and are considered to be conspecific although Both methods resolve to the sibling species level, their similarity based on enzyme patterns is comparatively whereas rRNA sequence comparisons detect relationships low (43%). at greater genetic distances.

This Page Intentionally Left Blank

Chapter 8

Mycocins (Killer Toxins) W.I. Golubev Contents 1. 2. 3. 4. 5.

Introduction Characteristics of mycocins Taxonomic implications of sensitivity to mycocins Taxonomic implications among the ascomycetous yeasts Taxonomic implications among the basidiomycetous yeasts . . .

Saccharomyces cerevisiae dsRNA exist in Hanseniaspora uvarum (Zorg et al. 1988), Sporidiobolus johnsonii (S. salmonicolor) (Kitaite and Citavicus 1988), and Cystofilobasidium bisporidii (Karamysheva et al. 1991). Mycocin production in Kluyveromyces lactis (Stark et al. 1990), Pichia acaciae (Worsham and Bolen 1990) and P. inositovora (Ligon et al. 1989) is associated with linear dsDNA plasmids. The killer phenotypes in Candida glabrata (Sriprakash and Batum 1984) and some strains of S. cerevisiae (Goto et al. 1990) are encoded by chromosomal genes. In many cases the genetic basis for killer activity has not been characterized but is presumed to be of chromosomal origin.

55 55 58 58 59

1. Introduction Almost 30 years ago strains of Saccharomyces cerevisiae were found to secrete a protein (killer toxin) lethal to other strains (sensitive) of the same species (Makower and Bevan 1963). These strains (killers) were immune to their own toxins. Some strains (neutral) neither secreted the toxin nor were they sensitive to it. Subsequent studies revealed that in most killer strains of S. cerevisiae, the toxin is produced by a linear dsRNA. Another dsRNA encodes a protein that encapsulates the dsRNAs into a virus-like particle (VLP). The VLPs are noninfectious and are transmitted by vegetative cell division or through sexual fusion (Tipper and Bostian 1984, Schmitt and Tipper 1990). The killer phenomenon provides an excellent model system to study host-virus interactions in eukaryotic cells (Wickner 1989), and to investigate the mechanisms of protein processing and secretion (Douglas et al. 1988). Possible uses for killer phenomena, which have aroused great interest, include the protection of industrial fermentations against contaminating yeasts (Rosini 1989) and the differentiation of pathogenic (Morace et al. 1983/84) and patented strains (Vaughan-Martini et al. 1988). In addition, killer dsRNA was shown to have interferon-inducing activity (Nosik et al. 1984) and the killer toxin has a therapeutic effect (Polonelli et al. 1986). For a proper understanding of the killer phenomenon, it is necessary to emphasize that it is not unique for yeasts. Production of proteins having toxicity specific for related organisms, which is associated with specific immunity, is known for smut fungi (Koltin 1988), paramecia (Quackenbush 1988), slime molds (Mizutani et al. 1990) and bacteria (Konisky 1982). The bacterial protein antibiotics are termed bacteriocins and, to accent the general nature of such antagonistic interactions, it is preferable to call yeast killer toxins mycocins and killer strains mycocinogenic strains. In the yeasts studied, mycocin determinants are cytoplasmically inherited. Killer systems similar to that of

2. Characteristics of mycocins All yeast mycocins studied are proteinaceous. They are either proteins or glycoproteins that consist of two or three subunits. In most yeasts, the molecular weights of secreted toxins are around 10 000-20 000 D (Bussey and Skipper 1975, Middelbeek et al. 1979, Pfeiffer and Radler 1982, 1984, Ashida et al. 1983, Ohta et al. 1984, Yamamoto et al. 1986, Yokomori et al. 1988, Suzuki and Nikkuni 1989) although the molecular weights of glycoprotein mycocins produced by Kluyveromyces lactis and Pichia anomala are much higher (100 000 D and greater) (Sugisaki et al. 1983, Stark and Boyd 1986, Kagiyama et al. 1988, Sawant et al. 1989). The secreted Kl mycocin (20 658 D) of Saccharomyces cerevisiae consists of a and (3 disulfidelinked polypeptides with a high content of hydrophobic and charged amino acids (Palfree and Bussey 1979, Zhu et al. 1987). The Kl precursor, which has been synthesized in cells, has a large single-strand polypeptide in which the a and (3 subunits are separated by an interstitial glycosylated y-region (Bostian et al. 1984, Lolle and Bussey 1986). After exposure to most mycocins, growing sensitive cells exhibit a reduction in intracellular pH and leakage of potassium ions, ATP and other cellular intermediates. Amino-acid transport and proton pumping to the culture medium are also inhibited (Skipper and Bussey 1977, Middelbeek et al. 1980b-d, Ashida et al. 1983). All of these effects are indicative of an increase in proton permeability in mycocin sensitive cells (de la Pena et al. 1981). Apparently, a mycocin becomes incorporated into the cytoplasmic membrane and creates ion permeable channels (Kagan 1983, Martinac et al. 1990). The overall 55

56

///. Ultrastructural and molecular properties used for yeast classification

effect of pore formation disrupts the cell electrochemical potential across the membrane and eventually results in cell death. Many, but not all yeast mycocins are pore-forming glycoproteins. The Kluyveromyces lactis mycocin, for example, does not elicit leakage of potassium ions and ATP but causes an arrest in the Gl phase of the cell cycle (White et al. 1989, Butler et al. 1991). The mycocin from Williopsis saturnus var. mrakii inhibits P-l,3-glucan synthesis (Yamamoto et al. 1986) and the KT28 toxin of Saccharomyces cereuisiae inhibits DNA synthesis (Schmitt et al. 1989). Regardless of the mode of action of mycocins, the first step of cell interaction is binding to the cell wall surface. In contrast to the time-lag process of membrane damage, binding of Kl mycocin to yeast cells is rapid and energy-independent (Al-Aidroos and Bussey 1978, Bussey et al. 1979). Binding is pH-dependent and may be responsible for the pH range of mycocin activity on yeast cells. Binding sites may be particular cell wall receptors, which have other fimctions, for instance, the uptake of nutrients. These receptors play a role not only in binding but, apparently, in translocation of mycocins through the wall inside the cell where they reach their targets and exert killing action. Comparison of mycocin killing spectra on whole cells and on spheroplasts showed that the cell wall determines the specificity of mycocin action. Saccharomyces cereuisiae toxin Kl can kill cells of the same species and those of Candida glabrata (Bussey and Skipper 1976, Young and Yagiu 1978), but it has a wide spheroplast-killing action and can kill the spheroplasts from Candida albicans, C utilis, Kluyveromyces lactis and Debaryomyces (Schwanniomyces) occidentalis although the whole cells of these species are insensitive to the toxin (Zhu and Bussey 1989). It has been shown that P-l,6-glucan is a component of cell-wall receptors for the S. cereuisiae mycocin (Hutchins and Bussey 1983) and also for Hanseniaspora uuarum mycocin (Radler et al. 1990). Probably, the (3-subunit of the Kl mycocin is a lectin-like domain that is essential for recognition and binding (Sturley et al. 1986, Douglas et al. 1988). The mannoprotein of the cell wall binds another mycocin, KT 28, of S. cereuisiae (Schmitt and Radler 1987, 1988). Mutations that change the molecular structure of cell wall glucans and mannans alter their capacity to act as receptors, prevent binding of the mycocins and induce resistance to them (Schmitt and Radler 1988, Nakajima et al. 1989). Yeast and hyphal forms of the same organism are different in their sensitivity to mycocins (Golubev and Boekhout 1992) as there are differences in the composition of their walls (Cole and Nozawa 1981). The early studies of the killer phenomenon were limited to Saccharomyces cereuisiae and were devoted to genetic, biochemical and molecular biological aspects, although in the 1970s, mycocinogenic strains were reported in other yeast genera (Philliskirk and Young 1975, Stumm et al. 1977, Kandel and Stern 1979). Until recently there

has been little rational basis for selecting the sensitive strains employed and most surveys of the incidence of killer yeasts in culture collections or natural substrates used one or two strains of S. cereuisiae and Candida glabrata. The frequency of mycocinogenic strains proved low (Middelbeek et al. 1980a, Rosini 1983, Starmer et al. 1987). However, their frequency was higher when screening for killer activity was conducted between strains of the same species, for instance, S. cereuisiae (Naumov et al. 1986, Thornton 1986, Heard and Fleet 1987). Similarly, by cross-testing within a species and by using taxonomically related organisms as target cultures, it was found that 98% of 63 strains of Rhodotorula mucilaginosa (Golubev and Churkina 1990) and 35% of 62 strains of Pichia membranifaciens (Golubev and Blagodatskaya 1993) were mycocinogenic. These data demonstrated the principal trait of mycocins - their specific toxicity. They are active against organisms related to killers, and the choice of sensitive strains for detecting mycocinogenic strains has become a taxonomic problem. At present, killer activity has been found in about 80 species representing almost 20 genera among both ascomycetous and basidiomycetous yeasts (Wickner 1985, Bruenn 1986, Young 1987) (Table 7). If one takes into account that several types of killers were identified in some species, then to date the number of killer types in yeasts is over 100. One of the most important conditions for detecting killer activity is the pH of the test medium. Killer activity is expressed under acidic conditions, usually at a pH within the range of 3-6. As a rule, yeast mycocins are most active at pH 4-5 (Woods and Bevan 1968, Young and Yagiu 1978, Middelbeek et al. 1979, Tolstorukov et al. 1989). With some exceptions (Ohta et al. 1984, Vustin et al. 1989), mycocins are rapidly inactivated at increased temperatures, and 15-20°C is the preferred temperature range for incubation during the assay for killer activity. Addition of glycerol (10-15%)) to the medium led to broader inhibition zones surrounding Kluyueromyces and Pichia killers and significantly increased the sensitivity of the bioassay (Lehmann et al. 1987b). Expression of killer activity by halotolerant yeasts is prompted and often enhanced in the presence of increasing (4-12%)) NaCl concentrations (Kagiyama et al. 1988, Suzuki et al. 1989). Yeast mycocins are more stable in agar medium than in liquid, and agitation causes their inactivation (Woods and Bevan 1968, Wilson and Whittaker 1989). The concentration of sensitive cells influences the sensitivity of the bioassay; in the case of an abundant lawn of the sensitive strain and a small inoculum of the killer, the inhibition zone can be narrow and rapidly overgrown or not developed at all. In addition, the composition of the medium and buffer solution may contribute to the sensitivity of the assay (Panchal et al. 1985). As a rule, nutritionally rich organic media are more suitable than synthetic media. In most cases, glucose-yeast extractpeptone agar or malt agar with sodium citrate-phosphate

57

8. Mycocins (Killer Toxins) I W.I. Golubeu Table 7 Yeast species for which mycocinogenic activity has been reported Yeast species

Reference

Rogers and Bevan (1978)

P. bimundalis

Polonelli et al. (1987)

Choi et al. (1990)

P. cactophila

Starmer et al. (1987)

Sriprakash and Batum (1984)

P. canadensis

Lehmann et al. (1987a)

C. guilliermondii

PolonelU et al. (1987)

P. ciferrii

Nomoto et al. (1984)

C. holmii

Nagomaya et al. (1989)

P. fabianii

Polonelli et al. (1987)

C. krusei

Lehmann et al. (1987a)

P. farinosa

Suzuki and Nikkuni (1989)

C. maltosa

PoloneUi et al. (1987)

P. guilliermondii

Zekhnov et al. (1989)

C. neodendra

Suzuki et al. (1989)

P holstii

PolonelU et al. (1987)

C. parapsilosis

Zekhnov et al. (1989)

P. inositovora

Hayman and Bolen (1990)

C. pseudotropicalis

Polonelli et al. (1987)

P. jadinii

Vaughan-Martini et al. (1988)

C. sonorensis

Starmer et al. (1987)

P. kluyveri

Zorg et al. (1988)

C. sp.

Yokomori et al. (1988)

P. membranifaciens

Golubev and Blagodatskaya (1993)

C. sphaerica

Vaughan-Martini et al. 1988

P. mexicana

Starmer et al. (1987)

C. ualida

Young and Yagiu (1978)

P. minuta var. nonfermentans PoloneUi et al. (1987)

Vaughan-Martini et al. (1988)

P. ohmeri

Starmer et al. (1987)

P. opuntiae

Starmer et al. (1987)

C. laurentii

Golubev and Kuznetsova (1989)

P. petersonii

Nomoto et al. (1984)

C. podzolicus

Golubev (1991b)

P. pini

Zekhnov et al. (1989)

Cystofilobasidium

Golubev (1990b)

P. quercuum

Zekhnov et al. (1989)

PoloneUi et al. (1987)

P. spartinae

PoloneUi et al. (1987)

D. hansenii

Suzuki et al. (1989)

P. subpelliculosa

Young and Yagiu (1978)

D. polymorphus

Vaughan-Martini et al. (1988)

P. thermotolerans

Ganter and Starmer (1992)

D. vanrijiae

Zekhnov et al. (1989)

Rhodotorula

Golubev (1992a)

Yeast species

Reference

Candida albicans C. dattila C. glabrata

C. uersatilis Cryptococcus

albidus

Debaryomyces

bisporidii

carsonii

Zekhnov et al. (1989)

fujisanensis

Golubev and Kuznetsova (1991)

R. glutinis

Golubev (1989a)

Radler et al. (1990)

R. mucilaginosa

Golubev and Churkina (1990)

Kloeckera apiculata

Rosini and Cantini (1987)

R. pallida

Golubev (1992b)

K. japonica

Starmer et al. (1987)

Saccharomyces

Vaughan-Martini and Rosini (1989)

S. paradoxus

K. dobzhanskii

Vaughan-Martini and Rosini (1989)

S. unisporus

K. lactis

Stark et al. (1990)

Sporidiobolus

K. lodderae

Vaughan-Martini and Rosini (1989)

S. pararoseus

K. marxianus

Lehmann et al. (1987b)

Trichosporon

K. phaffii

Vaughan-Martini and Rosini (1989)

Williopsis californica

Vustin et al. (1988a)

K. wickerhamii

Vaughan-Martini and Rosini (1989)

W. pratensis

Vustin et al. (1988b) Ohta et al. (1984)

Filobasidium

capsuligenum

Hanseniaspora

Kluyueromyces

uvarum

aestuarii

cereuisiae

Bussey et al. (1990) Naumov (1985) Nagornaya et al. (1989)

johnsonii

Golubev and Tsiomenko (1985)

capitatum

Morace et al. (1983/84)

Golubev et al. (1988)

Rosini and Cantini (1987)

W. saturnus

Vustin et al. (1990)

W. saturnus (W. beijerinckii) Vustin et al. (1988a)

Pichia acaciae

Worsham and Bolen (1990)

W. saturnus var. mrakii

P. amethionina

Starmer et al. (1987)

W. saturnus var. sargentensis Lehmann et al. (1987b)

P. anomala

Sawant et al. (1989)

W. saturnus var. subsufficiens Vustin et al. (1988a)

P. antillensis

Starmer et al. (1987)

K. wikenii Metschnikowia

pulcherrima

buffer are used. It is apparent that both the level and expression of mycocinogenic activity depends on a number of variables. In particular, the assay conditions can be crucial for detecting killers with low activity or those organisms that are weakly sensitive. Yeast mycocins possess only antifungal activity and do not act against bacteria or protozoa. Further, no

Yamamoto et al. (1988)

pharmacological activity was detected in tests with animal organs (Ohta et al. 1984, Pfeiffer et al. 1988). A few reports of the antibiotic action of yeast killers against a wide variety of prokaryotic and eukaryotic organisms resulted from an unwarranted extension of the killer phenomenon to any observed growth inhibition (Polonelli and Morace 1986, Nagornaya et al. 1989). There were

58

///. Ultrastructural and molecular properties used for yeast classification

no attempts to characterize the toxic substances cited in these reports and the growth inhibition observed was due to metaboHc products other than mycocins. In many cases, the antibacterial activity of yeasts is caused by pH changes in the medium as a resuh of organic acid production or the selective uptake and exchange of ions. In respect to antifungal activity, it is necessary to distinguish the killer phenomenon from other inhibition effects, for example, arresting of growth from mating pheromones. The broad anti-yeast activity of fresh Metschnikowia pulcherrima isolates (Vustin et al. 1990) is probably associated with excretion of the iron-binding agent pulcherriminic acid.

The mycocins produced by Kluyveromyces spp. are active not only against species of this genus and their anamorphs {Candida kefyr, C pseudotropicalis, C sphaerica), but also inhibit the growth of a rather diverse group of yeasts (Pichia anomala, S. cerevisae, Zygosaccharomyces rouxii, Candida albicans, C glabrata, C intermedia, C utilis and Kloeckera apiculata) (Panchal et al. 1985, Lehmann et al. 1987a, Rosini and Cantini 1987). VaughanMartini and Rosini (1989) studied intrageneric killersensitive interactions in Kluyveromyces, and concluded that sensitivity is not a species-specific property, but is strain-related. However, such an interpretation did not consider a serious limitation of mycocin-sensitivity testing by simple plate assay, namely, it does not allow one to 3. Taxonomic implications of sensitivity to distinguish between immunity and resistance to mycocins. mycocins These two types of insensitivity differ fundamentally, It is well known that fungal cell walls are diverse in both in their mechanisms and taxonomic significance. In architecture and chemical composition, and some of S. cerevisiae the mycocins, or their precursors, contain these differences are of taxonomic importance (Bartnickia component which gives immunity (specific for only Garcia 1968, Kreger-van Rij and Veenhuis 1971a, Fleet one mycocin type) to killer strains. Killers, when cured 1985, Weijman and Golubev 1987). Taking into account of the extrachromosomal genome which produces the the proteinaceous nature of mycocins and the involvement mycocin, became sensitive to its action. Immunity appears of different cell wall components in their binding, it is to be conferred at the cytoplasmic membrane level and reasonable to deduce that mycocin activity against whole this component may act as a competitive inhibitor of cells may be restricted to taxonomically related organisms mycocin by saturating membrane receptors (Boone et al. and that killer-sensitive interactions reflect taxonomic 1986, Hanes et al. 1986, Douglas et al. 1988). The soaffiliation. Present evidence supports such a view although called neutral strains contain the genetic determinants for much experimental data need to be thoroughly examined mycocin synthesis, either the mycocin is produced in an as most workers engaged in research on the killer inactive form or it is not secreted. Consequently, such phenomenon do not consider taxonomic problems. strains retain immunity (Bussey et al. 1982, Wingfield The main obstacle that delayed recognition of taxet al. 1990). Thus, the insensitivity caused by immunity onomic specificity of mycocin action is the varying is a clone-related property, which, when coupled with differences in host ranges. Although all mycocins are possible cross-immunity between the killers and neutral active against organisms taxonomically related to killers, strains-producing immunologically similar mycocins, may the degree of relatedness may vary from strains of the interfere with resistance shown at the cell-wall level and same species to species of closely related genera or even conferred by the nuclear genotype. All these reasons taken higher taxa. Apparently, the diversity of cell-wall receptors together can give a complicated picture of killer-sensitive involved in binding of mycocins can be both unique and relationships. For example, the study of the genus Kluyvercommon for some taxa and may be the basis of differences omyces demonstrated that more than half of the strains in mycocin action ranges. Until now, the primary fianctions examined were of killer and neutral phenotypes (Vaughanof these receptors was not established in yeasts. Martini and Rosini 1989). The preceding observations are the major reasons why many authors consider the 4. Taxonomic implications among the sensitivity patterns to be a strain-specific property and ascomycetous yeasts propose to use them as a fingerprinting tool to biotype Presently available information on killing patterns of strains of a species. In respect to closely related organisms, mycocins produced by ascomycetous yeasts is extremely the responses to mycocins that are free from the effects fragmentary and none of the screenings are wholly of immunity are of taxonomic interest. In such instances, comprehensive. The sets of organisms used as target it was found that all Kluyveromyces yarrowii strains cultures are usually very limited and were not selected (which are a sensitive phenotype) have identical responses with a taxonomic perspective. As mentioned above, the to Kluyveromyces mycocins. Interestingly, the strains of Kl mycocin of Saccharomyces cerevisiae can kill the cells K. marxianus (K fragilis) and Candida pseudotropicalis of the same species and Candida glabrata. Tolstorukov have the same sensitivity patterns but differ from C. kefyr, et al. (1989) reported that Kl mycocin is active against a synonym. These data are consistent with electrophoretic Candida fluviatilis, C. freyschussii and C rugosa, and the karyotypes, antigenic reactions, and long-chain fatty acid K2 mycocin of S. cerevisiae has a broad killing spectrum profiles (Caretta et al. 1980, Viljoen and Kock 1989a). which additionally includes Kluyveromyces marxianus, Many species in the genera Pichia and WilliopPichia canadensis, Candida maltosa and C tropicalis. sis produce mycocins (Table 7). No representatives of

, Mycocins (Killer Toxins) / W.I. Golubev

59

Table 8 Species susceptible to mycocins produced by sporidiobolaceous yeasts Susceptibility^

Species S.john

S.para

Species

Susceptibility^

R.glut

S.john

S.para

R.glut

+

R. fujisanensis

+

+

+

R. glutinis

+

+

B. miscanthi

+

R. graminis

B. yuccicola

+

R. hordea

+

R. hylophila

Bensingtonia

ingoldii

B. intermedia

+

Leucosporidium

antarcticum

+

L. fellii

+

L. scottii

+

Rhodosporidium

babjeuae

+ +

+

R. ingeniosa

+

+

R. javanica

+

+

R. lignophila

+

+

R. mucilaginosa

R. fluviale

+

+

R. muscorum

R. kratochuilouae

+

+

Sporidiobolus

+

S. microsporus

R. maluinellum

+

S. pararoseus

+

+

S. ruineniae

+

+

Sporobolomyces

+

+

S. falcatus

R. paludigenum

+

R. toruloides Rhodotorula

araucariae

+

R. bacarum R. fragaria

+

+

S. roseus

+

S. singularis

+

+ + +

R. diobouatum

R. lusitaniae

+

+

+ +

johnsonii

+

+

+

+ +

+

+ +

alborubescens

+ + +

+ +

^ Abbreviations: S.john, Sporidiobolus johnsonii; S.para, Sporidiobolus pararoseus; R.glut, Rhodotorula glutinis

these genera, except for W. (Zygowilliopsis) californica (Nomoto et al. 1984), could be cured of their killer activity and none of the species had detectable dsRNA or DNA plasmids. The observations suggest that mycocin production in these species is determined by nuclear genes. Most mycocins produced by Pichia and Williopsis are heat stable but are protease-sensitive and function over a wide pH range (Ashida et al. 1983, Ohta et al. 1984, Vustin et al. 1989). They have broad activity and kill species in the ascosporogenous genera Saccharomycopsis (Arthroascus), Debaryomyces (Schwanniomyces), Kluyveromyces, Saccharomyces, Zygosaccharomyces, Pichia, Williopsis (Zygowilliopsis) and Saccharomycodes. By contrast, members of the genera Clavispora, Hanseniaspora, Metschnikowia, Torulaspora, Williopsis and Schizosaccharomyces were resistant to these mycocins (Kagiyama et al. 1988, Sawant et al. 1988, Vustin et al. 1988a, Suzuki et al. 1989). It should be noted that representatives of the genus Candida are heterogeneous with respect to their sensitivity patterns (Yamamoto et al. 1988, Vustin et al. 1988b, Tolstorukov et al. 1989) and species of basidiomycetous affinity are insensitive to the mycocins produced by ascomycetous yeasts. Williopsis pratensis is an exception. Its mycocin is active not only against Debaryomyces hansenii, D. (Schwanniomyces) occidentialis, W (Zygowilliopsis) californica but also against some basidiomycetous yeasts, namely, sporidiobolaceous species (Vustin et al. 1991). In the genus Pichia, P acaciae and P inositovora differ

both in genetic determination of killer phenotype (see above) and apparently in the limited ranges of organisms susceptible to their mycocins (Worsham and Bolen 1990, Hayman and Bolen 1990). 5. Taxonomic implications among the basidiomycetous yeasts With the exception of Cryptococcus humicola (Golubev and Shabalin 1994), none of the mycocins produced by basidiomycetous yeasts are active against ascosporogenous yeasts. Moreover, the host ranges oiRhodotorula and Sporidiobolus mycocins include only organisms classified in the family Sporidiobolaceae (Table 8) whereas mycocins of Cryptococcus, Cystofilobasidium and Filobasidium kill members of the order Tremellales including the Filobasidiaceae (Table 9). As a rule, sporidiobolaceous yeasts are insensitive to mycocins produced by tremellaceous species as well as the reverse. Recently, it was found that although Rhodotorula fujisanensis mycocin mainly acts against sporidiobolaceous yeasts, it also shows a weak activity against some strains of tremellaceous yeasts (Golubev 1992a). These differences between sporidiobolaceous and tremellaceous yeasts in sensitivity and killing patterns of their mycocins correlates with the whole range of important taxonomic and phylogenetic markers, for example septal pore ultrastructure (Moore 1987b), monosaccharide composition of capsular polysaccharides (Weijman and Golubev 1987), and sequence similarity of small (Gottschalk and Blanz 1985) and large subunit

///. Ultrastructural and molecular properties used for yeast classification

60

Table 9 Host ranges of mycocins produced by tremellaceous yeasts Susceptibility^

Species C.pod

F.cap

Species

C.bis

C.lau

Susceptibility ^ C.pod

F.cap

C.bis

C.lau

Bullera armeniaca

+

+

+

C. skinneri

+

+

+

+

B. crocea

+

+

+

C. terreus

+

+

+

+

B. dendrophila

+

+

C. tyrolensis

+

+

+

+

C. uishniacii

+

+

+

B. globispora

+

'B. grandispora'

+ +

B. miyagiana B. oryzae

+

B. pseudoalba

+

Bulleromyces

albus

+

Cryptococcus

aerius

+

bisporidii

+

+

+

C. capitatum

+

+

+

+

C. infirmominiatum

+

+

+

+

Fellomyces

+

+

+

F. horovitziae

+

+

+

F. penicillatus

+

+

+

+

F polyborus

+

+

+

+

Fibulobasidium

B. sinensis B. variabilis

Cystofilobasidium

+ +

+

fiizhouensis

inconspicuum

+

+

+

+

Filobasidiella

neofi)rmans

+

+

+

+

C. albidus

+

+

+

Filobasidium

capsuligenum

+

+

+

+

C. amylolentus

+

C. albidosimilis

+

+

F florifi)rme

+

+

C. antarcticus

+

+

F uniguttulatum

+

+

C. baldrensis

+

+

Kockouaella

+

+

Mrakia fi-igida

+

+

M. nivalis

+

+

M. stokesii

+

Sebacina penetrans

+

+

+

Sirobasidium

+ + +

C. consortionis

+

C. curiosus C. dimennae

+

C. flavus C. fi'iedmannii

+

thailandica

+

+ magnum

+

+ +

+

C. fuscescens

+

+

+

+

C. gastricus

+

+

+

+

Sterigmatosporidium polymorphum

+

+

Tremella aurantia

+

+

T. encephala

+

+

T. foliacea

+

+

T. mesenterica T. mycophaga

+

+

+

T. simplex

+

+

+

Trichosporon pullulans

+

+

Tsuchiyaea wingfieldii

+

+

Udeniomyces

+

+

+

U. pyricola

+

+

+

U. puniceus

+

+

+

Xanthophyllomyces dendrorhous

+

+

C. gilvescens

C. hempflingii

+

C. huempii C. heveanensis

+

C. humicolus C. hungaricus

+ +

C. kuetzingii C. laurentii

+

+

C. lupi C. luteolus C. macerans

+

C. magnus

+

C. marinus C. podzolicus

+

^ Abbreviations: C.pod, Cryptococcus capsuligenum.

+

+

+

+

podzolicus;

+

+ +

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

+

megalosporus

+

+

C.bis, Cystofilobasidium

rRNAs (Fig. 16). Similar to the activity found for ascomycetous mycocins, basidiomycetous mycocins generally have nofixedtaxonomic level for their action. In practice, this feature dictates that the use of each mycocin as a taxonomic tool must be preceded by a careful study of the killing pattern. Owing to different host ranges, mycocins may serve to resolve different levels of taxonomic

bisporidii;

C.lau, Cryptococcus

laurentii.; F.cap,

Filobasidium

organization. Broad-spectrum mycocins are apparently of more interest for overall phylogenetic evaluations, whereas narrow-spectrum mycocins may be used for clarification of the taxonomy of some closely related organisms. The mycocin produced by Rhodotorula pallida has the narrowest known range of action; only strains of this species and R. minuta are affected by its action (Golubev

61

8. Mycocins (Killer Toxins) / W.I. Golubev :6

si •2 c

"5 o

'§1

•S

:6

CO

•Q

CO CX

84

en

^1 CJ iS

— Sterigmatosporidium polymorphum Filobasidiella neoformans

56

Filobasidium floriforme

100

95

Trichosporon ovoides (T. beigelii) —

85

S

O .52

Trichosporon cutaneum

Trichosporon pullulans 65

- Xanthophyllomyces dendrorhous - Cystofilobasidium capitatum

100

Rhodosporidium toruloides

-

+

Sporidiobolus Johnson ii

+

+

82

Leucosporidium scotti

Fig. 16. Similarity of basidiomycetous taxa from partial 18S and 26S rRNA sequences (phylogenetic tree with bootstrap values recalculated by C.P. Kurtzman from the data of Gueho et al. 1989), and the sensitivity (+) or insensitivity (-) of the species to mycocins produced by Sporidiobolus johnsonii (Golubev and Tsiomenko 1985), S. pararoseus (Golubev et al. 1988), Rhodotorula glutinis (Golubev 1989a), Filobasidium capsuligenum (Golubev and Kuznetsova 1989), and Cystofilobasidium bisporidii (Golubev 1990b).

1992b). Sensitive cultures show decreased budding, but cell viability is not affected. The mycocins secreted by Sporidiobolus johnsonii (Sporobolomyces salmonicolor) act mainly against species of Sporidiobolus and its anamorphs (Golubev and Tsiomenko 1985). The killing patterns from Sporidiobolus pararoseus (Golubev et al. 1988) and Rhodotorula glutinis are wider (Table 8). Yeast phases of smut fungi of the genera Microbotryum, Sphacelotheca and Ustilago are sensitive to R. glutinis mycocin (Golubev 1989a). The mycocin produced by the type strain of Cryptococcus laurentii has an inhibitory effect on yeast phases of the genera Atractogloea, Itersonilia, Microstroma and Trimorphomyces (Golubev and Kuznetsova 1989). Except for Trimorphomyces syzygius, these taxa are sensitive to Cystofilobasidium bisporidii mycocin. In addition, the latter acts against species in Calocera, Guepiniopsis and rust fungi of the genera Puccinia and Gymnosporangium (Golubev 1990b). According to our data, these rust fungi assimilate D-glucuronate, produce xylose-containing exopolysaccharides, have ubiquinones Q-8, 9, 10 (Sugiyama et al. 1988) and show high sequence homology in their 5S rRNA when compared with tremelloid yeasts (Gottschalk and Blanz 1985). Although this evidence supports the proposal that the Uredinales are the ancestral group which gave rise to the auricularioid and tremelloid fungi (Linder 1940), it is now believed that the yeast stages of the rust fungi that

were studied represent contaminating tremelloid yeasts (P.A. Blanz, unpublished data, chapter 10). In many cases, all strains of the same species and closely related species of the same genus have identical responses to specific mycocins. However, some taxa are heterogeneous not only within a genus but also within a species. Several reasons for such heterogeneity were mentioned above (immunity of killer and neutral strains, mutants with modified cell-wall components), but there is one more important reason - the taxonomic heterogeneity of many yeast taxa. As a rule, the teleomorphic taxa (taking into account immunity) are homogeneous in this respect in contrast to the anamorphic species in which the heterogeneity in sensitivity patterns occurs much more frequently. For example, almost all strains of Sporidiobolus spp. are sensitive to Rhodotorula glutinis mycocin while the ballistosporogenous genera Sporobolomyces and Bensingtonia include both sensitive (Table 8) and resistant species (S. gracilis, S. lactophilus, S. oryzicola, S. sasicola, S. subbrunneus, B. naganoensis and B. subrosea). The reassignment of basidiomycetous Candida spp. to Cryptococcus and Rhodotorula (Weijman et al. 1988) resulted in higher heterogeneity of these anamorphic genera. The sensitivity to Rhodotorula glutinis and/or R. mucilaginosa mycocins supports the transfer of the species Candida fl-agariorum, C graminis, C hylophila, C ingeniosa, C jauanica, C lignophila, C muscorum, C sonckii and Cryptococcus

62

///. Ultrastructural and molecular properties used for yeast classification

phylloplanus to the genus Rhodotorula. However, the 1989). Unlike Sterigmatomyces and Kurtzmanomyces, species Candida acuta, C. auricularia, C. bogoriensis, species of Fellomyces and Sterigmatosporidium are senC. buffonii, C. diffluens, C. foliorum, C. philyla and sitive to mycocins produced by tremellaceous yeasts C pustula are insensitive to the Rhodotorula mycocins. and this observation is in keeping with relationships Among recently proposed combinations, Cryptococcus determined from rRNA sequence comparisons (Gueho amylolentus, C. hungaricus, C. marinus and C podzoli- et al. 1990). cus are sensitive to Filobasidium capsuligenum and/or Much of the preceding data suggest that killer-sensitive C podzolicus mycocins (Table 9) but Candida aquatica, relationships reflect phylogenetic relatedness between C curiosa, C huempii, C tsukubaensis and Cryptococcusyeasts. The presence of immunity to killer toxins and yarrowii are not. In contrast to typical cryptococci, possible occurrence of resistant mutants limits the value of the latter, besides containing xylose, also have fu- mycocin sensitivity for identification. However, the killer cose and rhamnose in their exocellular polysaccharides phenomenon may be an additional taxonomic tool with (Golubev and Blagodatskaya 1978, Roeijmans et al. which to examine yeast classification.

Chapter 9

Nuclear DNA hybridization: Quantitation of close genetic relationships C.P. Kurtzman Contents 1. 2. 3. 4. 5. 6. 7.

Introduction Cellular DNAs DNA isolation and purification DNA base composition DNA relatedness Interpretation of DNA relatedness Impact of DNA reassociation studies on yeast systematics . . . .

presence affects estimates of relatedness between taxa since it is the intent of most studies to measure genomic similarity from complementarity of single-copy nuclear DNA (nDNA) sequences. Christiansen et al. (1971) reported up to 15% rapidly renaturing sequences in the nDNA of yeasts, which may be interpreted as analogous to the repeated sequences found in higher eukaryotes (Britten and Kohne 1968). However, the presence of rapidly renaturing, plasmid-like 2|im circular DNA in Saccharomyces cerevisiae (Bak et al. 1972) with a buoyant density similar to nDNA suggests the proportion of repeated sequences in nDNA to be smaller than first thought. Similar circular DNA species have been reported from Pichia canadensis (Hansenula wingei) and Candida glabrata (O'Connor et al. 1975, 1976). Linear DNA plasmids have been discovered in Kluyveromyces lactis and many other species (Gunge et al. 1981, Fukuhara 1995). These plasmids, which are lighter than the densities of both nuclear and mitochondrial DNA, appear to be associated with killer characters of yeasts. The work of Timberlake (1978) indicates the genome of the fungus Aspergillus nidulans to consist of approximately 97-98% unique sequences and 2-3% repeated sequences. The repeated sequences appear to code for ribosomal RNA. Nuclear DNA represents the preponderance of cellular DNA in yeasts, and it has a kinetic complexity of 6.514x10^ daltons or about two to five times that found in Escherichia coli (Christiansen et al. 1971, Petes et al. 1973). Between 5 and 20% of the total DNA in S. cerevisiae is mitochondrial in origin. It is present in a variable number of copies and is arranged in closed circles with a G + C content noticeably lower than the nDNA (Hartwell 1974). Sedimentation studies (Blamire et al. 1972) and measurements of contour length (HoUenberg et al. 1970, Petes et al. 1973) suggest a molecular mass of 46x10^ daltons. The mitochondrial DNA (mtDNA) contour length for several other yeasts has been reported to be 25-50% of that of S. cerevisiae (O'Connor et al. 1975, 1976, McArthur and Clark-Walker 1983).

63 63 63 64 65 66 67

1. Introduction The definition of a species, whether of higher plants, animals, or microorganisms, has as its basis the principle of genetic isolation. Simply put, members of a species are considered interfertile, whereas genetically separate species are not (Dobzhansky 1976). However, until the late 1960s, the primary means for defining species of yeasts lay with the subjective appraisal and weighting of phenotypic properties such as cellular morphology and growth responses on various sugars and other compounds. Although it was known that the assimilation and fermentation of many compounds were controlled by one or only a few genes (Lindegren and Lindegren 1949, Winge and Roberts 1949) and that using growth reactions could result in an erroneous definition of species, practical genetic means for defining species often did not exist. With the development of methods for measuring DNA duplex formation came the opportunity to define species on the basis of overall genetic similarity. When measurements of DNA reassociation are used to define species, the extent of DNA relatedness expected between members of a biological species must first be determined. In the discussion that follows, various aspects of this issue will be examined. DNA relatedness studies have had a major impact on yeast systematics, but in this era of increasingly sophisticated molecular techniques that often involve gene sequencing, it is sometimes forgotten that DNA hybridization has provided the framework upon which many other types of molecular genetic comparisons have evolved. For this reason, results from DNA reassociation are considered the "gold standard" by many because they provide the first approximation of whether or not strains are members of the same biological species.

3. DNA isolation and purification Methods for isolation and purification of yeast DNA were previously described in detail and the following account will serve only as a brief review to direct attention to pertinent references. Most methods for DNA reassociation

2. Cellular DNAs Several classes of DNA occur in eukaryotes, and their 63

64

///. Ultrastructuml and molecular properties used for yeast classification

require substantial amounts of DNA, and it is not uncommon to process 5-50 g (wet weight) of cells. For most yeast strains, DNA isolation is relatively straightforward. Cell wall breakage may be effected by mechanical or lytic means. Mechanical methods have the advantage of being relatively rapid but, unless cell breakage is carefully monitored, considerable shearing of the DNA may result. The Braun cell homogenizer is one of the more frequently used mechanical devices, and causes breakage by shaking of buffered cell suspensions in the presence of 0.45 mm glass beads (Bak and Stenderup 1969, Price et al. 1978, Kurtzman et al. 1980a). An inexpensive variation of this technique involves placing the buffered cell and bead mixture into a test tube and "vortexing" the mixture (Lipinski et al. 1976, Van Etten and Freer 1978). Less frequently reported methods include grinding acetone-dried cells in a ball mill (Martini and Phaff 1973) and grinding cells in liquid nitrogen with a mortar and pestle (Storck and Alexopoulos 1970, Mendonga-Hagler et al. 1974). Sonication is seldom used for cell breakage because it is inefficient for yeasts and it causes extreme and uncontrolled DNA shearing. Lytic methods offer the possibility of isolating DNA with a higher molecular weight than might be obtained by mechanical cell disruption. Meyer and Phaff (1969) and Bicknell and Douglas (1970) used a modification of the Smith and Halvorson (1967) technique in which cells undergo autolysis in the presence of saline containing EDTA (ethylenediamine tetraacetate), 2-mercaptoethanol and sodium dodecylsulfate. The commercial enzyme preparations Glusulase and Zymolyase lOOT may be used to prepare osmotically fragile sphaeroplasts by cell wall digestion. Following this step, high molecularweight DNA is isolated from the lysed sphaeroplasts. Cryer et al. (1975) have given details of these procedures. Zymolyase lOOT generally promotes more rapid cell-wall dissolution than Glusulase, but neither enzyme preparation is particularly effective with basidiomycetes. Rhodes and Kwon-Chung (1982), however, reported dissolution of Cryptococcus neoformans cell walls with the multienzyme preparation Mutanase. Following rupture or lysis of the cells, DNA isolation and purification may be carried out by the methods of Marmur (1961) and Bernardi et al. (1970) as detailed by Price et al. (1978). Basically, this consists of making the buffered cell suspension 1 M in sodium perchlorate and 1% in sarcosate and emulsifying with an equal volume of chloroform/iso-amyl alcohol (3-methylbutanl-ol) (24:1, v/v). After incubation and phase separation by centrifugation, DNA is precipitated from the aqueous phase with cold ethanol. The DNA is treated with a combination of a-amylase and pancreatic ribonuclease (RNase), and finally with Pronase. Following enzyme removal, the DNA is again precipitated with ethanol, spooled, redissolved and further treated with a-amylase, pancreatic RNase and Ti RNase. Additional purification can include

hydroxyapatite fractionation and/or banding in a cesium chloride gradient. Some yeasts have active deoxyribonucleases (DNases) that escape denaturation during the usual extraction procedures and cause sufficient degradation of the DNA to prevent spooling. Several methods have produced various degrees of success for deactivating nucleases and merit testing if problems are encountered. Diethyl pyrocarbonate, used at 0.5-1.0% at the time of cell breakage, gave encouraging results in studies of Lipomyces spp. (D.L. Holzschu and H.J. Phaff, personal communication) and Sporidiobolus spp. (Holzschu et al. 1981). Ehrenberg et al. (1976) discussed the interaction of diethyl pyrocarbonate with nucleic acids and nucleases and emphasized some of the precautions to be taken. Allergy to the compound may be a problem for some individuals. Kurtzman et al. (1986) found that the spermine/spermidine/sucrose buffer of Morris, as cited by Timberlake (1978), was much more effective at inactivating nucleases in Aspergillus spp. and Neurospora spp. than the sucrose buffer frequently used in yeast studies (Price et al. 1978). This was confirmed by Gueho et al. (1984, 1985) for species of Geotrichum, Dipodascus and Trichosporon. Methods for assessing DNA purity include chemical analyses as well as spectrophotometric measurements and have been summarized by Price et al. (1978) and Johnson (1981). 4. DNA base composition 4.1. Methodology Base composition of nuclear and mitochondrial DNA, expressed as molar percentages of guanine-plus-cytosine (G + C), can be determined from thermal denaturation profiles (melts), buoyant density in cesium salt gradients generated by ultracentrifugation, chemical analysis, absorbance ratios, or high-performance liquid chromatography (HPRL) of nucleotides or free bases (Johnson 1981, Hamamoto et al. 1986b). Many investigators use thermal denaturation (Marmur and Doty 1962), but Bak (1973) showed that results obtained by this method can be greatly affected by sample impurities and/or minor DNA species and must therefore be interpreted with caution. Cesium chloride buoyant density determinations (Schildkraut et al. 1962) generally show the greatest accuracy since they are unbiased by the presence of contaminating RNA, mtDNA and other impurities such as carbohydrates and proteins. 4.2. Taxonomic uses of guanine-plus-cytosine (G + C) values The taxonomic uses of G + C values are mainly exclusionary, because the 800 or so yeast species range in nuclear G + C contents from approximately 27-70 mol%, and overlap between unrelated species is inevitable. For example, Zygosaccharomyces mrakii and Z florentinus have nuclear G + C contents of 42.2 and 42.4%, respectively, yet they show only 6.0% base sequence complementarity (Price et al. 1978). Since similar G + C contents do not

9. Nuclear DMA hybridization: Quantitation of close genetic relationships / C.R Kurtzman

necessarily mean similar base sequences in the DNA, it must be determined how dissimilar G + C values need to be to state that two strains represent different species. This depends to some extent upon the method used for determination of base composition. When buoyant density is used, the span of G + C values among strains of a species is usually less than 1% (Price et al. 1978, Kurtzman et al. 1980a,b, Phaff et al. 1985), which is approximately coincident with the accuracy of the method, i.e., a standard deviation of 0.00-0.50 mol%. Thermal denaturation shows greater variation, and strains of a species may exhibit a G + C range of as much as 2% (Meyer et al. 1978). Thus, strains showing a difference in G + C contents in excess of 1.0-1.5% by buoyant density or 2.0-2.5% by thermal denaturation may be expected to represent different species. The nuclear G + C content of ascomycetous yeasts is about 27-50%, whereas that of basidiomycetous yeasts is approximately 50-70%. Except for the narrow range of 48-52%), where some overlap occurs, the taxonomic affinity of anamorphs can be reliably determined from their base composition. For species in the doubtful range, placement can be made by examining cell wall structure under the transmission electron microscope (Kreger-van Rij and Veenhuis 1971a) or through use of the diazonium blue B test (van der Walt and Hopsu-Havu 1976, Hagler and Ahearn 1981). The range of G + C contents among species within a genus is quite often 10% or less as found in Deharyomyces, Hanseniaspora, Issatchenkia, Kluyveromyces, Metschnikowia and several other genera. Genera showing a range among species of greater than 10% may be polyphyletic, but a narrower range does not ensure monophyly. 5. DNA relatedness 5.1. Methodology The methods for assessing DNA relatedness vary, but short of sequencing, they rely on measuring the extent and stability of renatured DNA strands from test pairs, i.e., the fidelity of complementary base pairing. The theoretical and operational aspects of DNA hybridization were elegantly presented by Britten and Kohne (1968), and their paper has served as a primer for those now using DNA reassociation techniques. Depending upon the method, the DNA may or may not need to be labelled with radioisotopes. An interesting variation of the DNADNA hybridization technique was employed by Bak and Stenderup (1969). Radioactive complementary RNA was synthesized in vitro with each test DNA serving as a template, and the relatedness between taxa was then assessed from hybridization of single-stranded DNA with the synthesized RNA. In vivo labeling of DNA is frequently done using ^"^C, •^H or ^^P. Each isotope has its particular advantages and disadvantages. The DNA may also be labelled in vitro with ^^^I (Commerford 1971, Mendonga-Hagler and Phaff

65

1975, Holzschu et al. 1979) or by nick translation (Kelly et al. 1970, Maniatis et al. 1975). DNA labelled with ^'^H in vitro must be highly purified to completely remove RNAs, proteins and carbohydrates. Banding the DNA in cesium chloride in a preparative ultracentrifiige is usually adequate. Following labeling, DNA reassociation reactions may be carried out using the membrane method which involves immobilizing single strands of one of the DNA species onto nitrocellulose filters and allowing sheared single strands of the second DNA to react with the immobilized DNA (Denhardt 1966). Alternatively, both DNA species may be allowed to react in free-solution, and the extent of reassociation assessed by the extent of binding of the resulting duplexes to hydroxyapatite (Brenner 1973) or from their resistance to hydrolysis by Si nuclease (Crosa et al. 1973). Price et al. (1978), Johnson (1981), Jahnke (1987) and Kurtzman (1993b) provided references and detailed procedures for these methods. Besides following DNA reassociation with radioactive preparations, the reactions may also be monitored spectrophotometrically by measuring the kinetics of duplex formation. This technique has been refined to the point where results are comparable to data obtained using isotopes (Subirana and Doty 1966, De Ley et al. 1970, Seidler and Mandel 1971, Kurtzman et al. 1980a). Another non-isotopic method that shows promise is based on chemiluminescence (Adnan et al. 1993). Singlestranded target DNA is covalently linked in the wells of special microtitre plates and hybridized with photobiotinlabelled probe DNA. Following incubation, extent of reassociation is determined with a chemiluminescent reagent. Sugita et al. (1994) reported good correlation with the spectrophotometric method. Because spectrophotometers with programmable thermal control are not presently being manufactured, chemiluminescence may be a reliable non-isotopic alternative. A number of factors affect DNA renaturation reactions and so may have a marked effect on the results obtained. Highly purified DNA preparations are essential. Contaminating protein or RNA can result in falsely high or low relatedness values depending on whether the contaminants act as single-stranded or double-stranded DNA in the assay system (Brenner 1973). If comparisons of taxa are to be made from singlecopy nDNA, it is necessary to remove mtDNA, plasmidlike circular DNA and repeat sequence nDNA. Circular plasmid-like DNA as well as circular mtDNA may be relatively easily separated from nDNA by centrifiigation in cesium chloride in the presence of ethidium bromide. Williamson and Fennell (1975) emphasized that resolution is poor should mtDNA break into linear fragments during isolation, a not uncommon event. However, they point out that linear mtDNA may be effectively resolved in cesium chloride gradients when treated with 4', 6-diamidino-2phenylindole (DAPI), a fluorescent dye that preferentially binds with AT-rich DNA. Repeated sequences may be

66

///. Ultrastructural and molecular properties used for yeast classification

removed from nDNA by partial reassociation of sheared DNA fragments to a Co^ value of 0.1-0.2 (Co^ is the initial nucleotide concentration in moles per liter multiplied by the time in seconds; Britten and Kohne 1968) followed by fractionation with hydroxyapatite (Price et al. 1978). Because the rate of reassociation is affected by concentration, multiple copies duplex most rapidly and can be removed because of their ability to bind to hydroxyapatite (Britten and Kohne 1968). Price et al. (1978) and Fuson et al. (1979) used this method to remove repeated sequences from yeast DNA for taxonomic studies. The fractionation undoubtedly also removes mtDNA and plasmid-like DNA because both occur as multiple copies and their small molecular weight would allow rapid reassociation when in significant concentration. The same effect may be obtained in spectrophotometric determinations of relatedness if the time between melting and cooling to the reassociation temperature (I'm-25) is not too rapid. Under the conditions used by Kurtzman et al. (1980a), a cooling period of 12min allowed duplexing of most repetitive nDNA sequences as well as those of mtDNA. Relatedness values of strains common to the work of Price et al. (1978) and of Kurtzman et al. (1980a) were essentially identical, showing that similar results can be obtained with rather different methodologies. For most studies, DNA fragment size and the ionic strength of the incubation medium may be maintained at any constant value within a fairly wide range without significantly affecting the results (Brenner 1973). However, increasing ionic strength increases the reaction rate. Seidler et al. (1975) and Kurtzman et al. (1980a) used relatively high concentrations of standard saline citrate (SSC, 150mM sodium chloride/15 mM sodium citrate, pH 7.0) when assessing DNA relatedness spectrophotometrically in order to complete the determination within a few hours. Thus, when C^t values are used as a measure of the extent of reassociation, the ionic strength of the reaction mixture must be known if values obtained in different studies are to be compared. For example, the incubation mixture used by Kurtzman et al. (1980a) allowed DNA reassociation to proceed nearly five times faster than that which occurred in the buffer system employed by Price et al. (1978). As noted in the definition of C^t values, initial nucleotide concentration also affects the reaction rate; consequently, a solution containing 100 |ig of DNA per ml reassociates twice as fast as one containing 50 ^ig. Optimal DNA reassociation occurs at 25° to 30°C below the midpoint of the melting curve (7^), and this is dependent on base composition since GC base pairs with their triple hydrogen bonds have greater thermal stability than do AT pairs with their double hydrogen bonds (Marmur and Doty 1962, Marmur et al. 1963). Assuming that two yeast DNAs have melting temperatures of 85°C and thus the optimum reassociation temperature (T^ - 25) is 60°C, pairs that are highly related at 60°C also show high relatedness at more stringent temperatures such as 65°C or at 75°C. Pairs showing only moderate

relatedness at 60°C show much less binding at higher temperatures than closely related pairs, reflecting the greater mismatch of base pairs present. These studies point out the need for proper reannealing temperatures, and also show that higher incubation temperatures allow an estimate of stability that indicates the extent of base pair mismatch. Temperatures below T^ - 25 would show even greater reassociation for sparingly related pairs. Relatedness may also be estimated from the thermal stability of the renatured heterologous DNA as compared with renatured homologous DNA. This may be done spectrophotometrically by monitoring thermal melts or with labelled DNA by thermal elution from hydroxyapatite columns (Ullman and McCarthy 1973, Lachance 1980), or by the batch method of Brenner et al. (1969) as modified by Price et al. (1978). Brenner et al. (1972) equated one degree of difference in thermal stability with 1% mismatch in base pairs. Lower thermal stability (AJm) usually correlates well with lower DNA complementarity. 6. Interpretation of DNA relatedness 6.1. Quantitation of relatedness Measurements of DNA complementarity are commonly expressed as percent relatedness. This usage can be misleading because DNA strands must show at least 75-80% base sequence similarity before duplexing can occur and a reading is registered on the scale of percent relatedness (Bonner et al. 1973, Britten et al. 1974). As seen from the preceding discussion, experimental conditions greatly influence extent of duplex formation. Although replicate determinations often vary by 5%, different methods of measuring DNA relatedness do give essentially the same result. Consequently, when measured under optimum conditions, percent DNA relatedness provides an approximation of overall genome similarity between two organisms. However, the technique does not detect single gene differences or exact multiples of ploidy, but aneuploidy can often be detected (Vaughan-Martini and Kurtzman 1985). 6.2. Correlation with biological relatedness On the basis of extensive comparisons between species of enteric bacteria, Brenner (1973) proposed that strains showing 70% or greater DNA relatedness should be considered members of the same species. Johnson (1973) compared numerous anaerobic bacteria, and arrived at essentially the same guidelines. Price et al. (1978) examined yeast species in four genera and proposed that strains having 80% or greater DNA relatedness were conspecific, an opinion expressed earlier by Martini and Phaff (1973) from their studies of Kluyveromyces spp. From studies of divergence among biotypes of the Cryptococcus vishniacii complex, Baharaeen et al. (1982) suggested that strains showing 60% or greater DNA relatedness were conspecific. The preceding guidelines concerning relatedness were based on the observation that strains of

9. Nuclear DNA hybridization: Quantitation of close genetic relationships / C.P. Kurtzman

67

Table 10 Correlation of mating reaction and nuclear DNA complementarity among closely related heterothallic ascomycetous and basidiomycetous yeasts Species^

Mating reaction

DNA Reference rel. (%)

Filobasidiella neoformans x Filobasidiella bacillispora Fair conjugation, 0-30% basidiospore viability (F^ progeny; F2 not determined) Good conjugation, ascospores viable Issatchenkia scutulata var. scutulata x Issatchenkia (Fi=5%;F2 = 17%) scutulata var. exigua

55-63

Aulakh et al. (1981)

21-26

Kurtzman et al. (1980b)

20-27

Kurtzman et al. (1980a)

Pichia amylophila x Pichia mississippiensis

Good conjugation, ascospores not viable

Hansenula bimundalis x Hansenula americana

Poor conjugation, ascospores not produced

21

Kurtzman (1984b)

Pichia opuntiae var. opuntiae x Pichia opuntiae var. thermotolerans

Infrequent conjugation, ascospores produced rarely

28

Phaff and Holzschu (1981), Holzschu (1981)

Pichia opuntiae var. opuntiae x Pichia antillensis

No conjugation, ascospores not produced

Hansenula alni x Hansenula wingei

Poor conjugation, ascospores not produced

Issatchenkia orientalis x Issatchenkia occidentalis

Infrequent conjugation, ascospores not produced

55 6-10 3-8

Starmer et al. (1984) Fuson et al. (1979) Kurtzman et al. (1980b)

^ The names used are those appearing in the original publications.

species characterized by traditional means usually show 60-100% DNA complementarity. Species boundaries can be prescribed on the basis of a number of criteria, but for sexually reproducing species, ability to hybridize and produce fertile successive generations would seem to be of cardinal importance. Dobzhansky (1976) noted that, among sexually reproducing and outbreeding organisms, species can be defined as Mendelian populations or arrays of populations that are reproductively isolated from other population arrays. He cited a number of examples of higher eukaryotes where interspecific hybridizations have been documented {Drosophila spp., mammals, frogs, fishes and plants). Fertility varies among hybrids, being rather rare among animal species but much more common among plants. Since conjugation in bacteria is infrequent and may not involve the entire genome, genetic studies could not form the basis for interpretation of DNA complementarity studies among these prokaryotes. Many yeasts, on the other hand, have known sexual states and with such species hybridization offers a means for correlating results from DNA studies with actual biological phenomena. Comparisons of extent of nDNA complementarity with measurements of fertility among pairs of heterothallic yeasts have shown that increasing DNA relatedness parallels increased fertility, and that strains showing DNA relatedness at 70% or greater are usually conspecific (Table 10). This same trend was noted for homothallic yeasts (Kurtzman 1987b, 1991a). This is not surprising because homothallics often show some outbreeding through conjugation between independent cells. From these comparisons, the following predictions can be made concerning DNA complementarity and biological relatedness among strains: (1) conspecific strains generally exhibit in excess of 70% DNA relatedness; (2) varietal designations can be accorded to those strains showing 4070%) DNA relatedness unless genetic crosses demonstrate

the absence of interfertility. Issatchenkia scutulata and its variety exigua show some intervarietal fertility and at 25%) DNA relatedness appear to be an exception. Conversely, S. cerevisiae and S. pastorianus show 58%) relatedness, but appear to be independent species (Vaughan-Martini and Kurtzman 1985); (3) strains showing less than 40% DNA relatedness are nearly always genetically isolated and represent independent species. Application of the preceding predictions of relatedness to anamorphic species may not be appropriate and can be criticized on the basis that species not undergoing sexual reproduction may evolve at different rates than teleomorphic taxa. A counter argument is that since sexual states are being continually discovered for anamorphic species, perhaps few yeasts are actually devoid of a meiotic cycle. Furthermore, the frequency of sexual reproduction for teleomorphic species in their natural habitats is unknown and many may befiinctionalanamorphs. Perhaps the most definitive observation at present is that there appears to be neither a greater nor lesser range of DNA relatedness among strains of anamorphic species than found among teleomorphic species. As a consequence, application of the preceding predictions for recognition of anamorphic species from comparisons of DNA relatedness does not appear unreasonable. 7. Impact of DNA reassociation studies on yeast systematics The information provided by DNA reassociation studies has had a profound impact on yeast systematics. Most notably, it has shown that many morphological and physiological characters used for definition of species and genera are taxon-specific and without phylogenetic significance. These characters include fermentation of glucose, nitrate assimilation, and presence or absence of pseudo- and true hyphae (Table 11). DNA reassociation

///. Ultrastructural and molecular properties used for yeast classification

68

Table 11 Nuclear DNA relatedness between yeast species differing in traditional taxonomic characteristics Species ^

Characteristic

+ or -

DNA relatedness

Reference

(%) Candida slooffii Torulopsis pintolopesii

Pseudohyphae

80

Mendonga-Hagler and Phaff (1975)

Hansenula wingei H. canadensis

True hyphae

78

Fuson et al. (1979)

Debaryomyces D. uanriji

fiyrmicarius

Glucose ferm.

96

Price et al. (1978)

castellii

Lactose assim.

97

Price et al. (1978)

Nitrate assim.

75

Kurtzman (1984a)

Nitrate assim.

100

Kurtzman (1990a)

Schwanniomyces S. occidentalis

Hansenula minuta Pichia lindneri Sterigmatomyces S. indicus

halophilus

The names used are those appearing in the original publications.

Table 12 Extent of nDNA reassociation between Saccharomyces cerevisiae and other species of Saccharomyces sensu stricto ^ Species

DNA rel.

Species

(%)

DNA rel.

(%)

S. aceti

96

S. hispalensis

94

S. beticus

99

S. italicus

96

S. capensis

94

S. norbensis

90

S. cheualieri

96

S. oleaceus

94

S. oleaginosus

89 93

S. cordubensis

100

S. coreanus

94

S. prostoserdouii

S. diastaticus

92

S. bay anus

5

S. gaditensis

95

6

S. hienipiensis

95

Debaryomyces melissophilus

From Vaughan-Martini and Kurtzman (1985).

has also demonstrated the synonymy of quite a large number of species. This is illustrated by Table 12 where it is shown that 15 Saccharomyces "species" are conspecific with S. cerevisiae. Numerous other equally important examples of the impact of DNA reassociation are found in the Comments sections of species and genus descriptions later in this book.

Chapter 10

Ribosomal RNA/DNA sequence comparisons for assessing phylogenetic relationships C.P. Kurtzman and P.A. Blanz

1. Introduction Comparisons of ribosomal RNA (rRNA) and its template ribosomal DNA (rDNA) have been used extensively in recent years to assess both close and distant relationships among many kinds of organisms. The interest in rRNA/rDNA comes from two important properties: (1) ribosomes are present in all cellular organisms and appear to share a common evolutionary origin, thus providing a molecular history shared by all organisms, (2) some rRNA/rDNA sequences are sufficiently conserved that they are homologous for all organisms and serve as reference points that enable alignment of the less conserved areas used to measure evolutionary relationships. In this review, we will describe the impact that rRNA/rDNA comparisons are beginning to have on our understanding of evolutionary relationships among the yeasts and how this knowledge will influence development of a system of classification based on phylogeny. Additionally, we will discuss application of this new information to the practical goal of rapid yeast identification.

and Liu (1990) are generally satisfactory. Techniques for the isolation and characterization of rDNA have been described by White et al. (1990) and Vilgalys and Hester (1990). Methods for sequencing nucleic acids are now commonplace. Techniques for 5S rRNA sequencing have been summarized and discussed by Walker (1984, 1985a). The procedures used for sequencing large and small subunit RNAs and DNAs are based on the dideoxy method of Sanger et al. (1977). Lane et al. (1985) have described the application of this method to rRNA sequencing through use of oligonucleotide primers and reverse transcriptase. Most initial comparisons of yeasts and other microorganisms were based on reverse transcriptase mediated sequencing of rRNAs because of the relative simplicity of this method over earlier rDNA sequencing techniques. Complete sequences often were not determined because McCarroll et al. (1983) and Lane et al. (1985) demonstrated that partial sequences of small subunit rRNAs provided essentially the same phylogenies as complete sequences. White et al. (1990) and Kaltenboeck et al. (1992) provided protocols for sequencing rDNA using specific oligonucleotide primers and the polymerase chain reaction (PCR). rDNA sequencing results in fewer artifacts than rRNA sequencing, and the method offers the opportunity to sequence both strands of the rDNA genes, thus fiirther reducing errors. Recently, methodologies again evolved with the introduction of automated sequencers.

2. Methods for isolation and characterization of rRNAs and rDNAs rRNAs occur in several size classes in eukaryotes; the genes coding for large (25S to 28S), small (18S) and 5.8S rRNAs occur as tandem repeats with as many as 100 to 200 copies. The separately transcribed 5S rRNA gene may also be included in the repeat (Garber et al. 1988). Each of the rRNA size classes has been examined for the extent of phylogenetic information present. The large quantities of rRNAs expressed by cells make isolation and purification of these molecules relatively easy despite the nearly ubiquitous occurrence of quite stable RNases. Numerous methods for isolation and purification have been described. The procedures of Chirgwin et al. (1979) and their modification by Kurtzman

3. Estimates of relatedness from rRNA/rDNA comparisons 3.1. rRNA/rDNA reassociation The first extensive use of rRNA comparisons for yeast systematics was described by Bicknell and Douglas (1970), who measured species divergence from extent of reassociation between tritium-labeled 25S rRNA and complementary sites on filter-bound nuclear DNA. This and similar methods have been used by other workers, but because all species pairs must be tested, the comparison of large numbers of taxa is quite laborious. Another aspect of this procedure is that as evolutionary distances increase, a point is reached at which there is insufficient base sequence similarity to allow duplexing of paired molecules. It has been suggested that sequences must

Contents 1. 2. 3. 4. 5.

Introduction Methods for isolation and characterization of rRNAs and rDNAs Estimates of relatedness from rRNA/rDNA comparisons RehabiHty of rRNA gene trees to infer phylogeny Rapid molecular methods for yeast identification

69 69 69 72 74

69

70

///. Ultrastructural and molecular properties used for yeast classification

exhibit 75-80% or greater similarity before reassociation can occur (Bonner et al. 1973, Britten et al. 1974). 3.2. Restriction fragment length polymorphisms of rDNA Because rDNAs occur in multiple copies, they lend themselves to analysis based on restriction fragment length polymorphisms (RFLPs). Magee et al. (1987) treated rDNAs from several medically important Candida species with a variety of restriction endonucleases and concluded that C guilliermondii, C. tropicalis and C. albicans produced sufficiently different digestion patterns to allow recognition of each species. Similar results were obtained by Vilgalys and Hester (1990) for several species of the genus Cryptococcus. Lachance (1990a) used RFLP patterns to map the genetic profiles of 125 isolates of the cactus yeast Clauispora opuntiae that had been collected worldwide. Nearly all restriction sites that allowed discrimination of individual strains were located in the hypervariable intergenic spacer region. Data from the preceding studies show that RFLP patterns allow recognition of individual species as well as individual strains of a species. Consequently, the method has considerable diagnostic value. Estimates of evolutionary relationships from RFLP patterns have been reported for species assigned to Candida (Magee et al. 1987) and to Cryptococcus (Vilgalys and Hester 1990). Such estimates would be expected to be less accurate than estimates derived from sequence comparisons because as evolutionary distances increase, the extent of pattern similarities becomes less certain. 3.3. 5S rRNA Because of the conserved nature and small size (ca. 120 nucleotides) of 5S rRNAs, their sequences are easily determined and have been widely used for estimating broad phylogenetic relationships (Hori and Osawa 1979). Walker and Doolittle (1982) compared 5S rRNAs fi*om eight basidiomycetes, including four yeasts, and concluded that sequence similarity correlated with the structure of hyphal septa (i.e., simple pores versus dolipores). The report of Gottschalk and Blanz (1984) that rust fiingi, which have simple septal pores, cluster with the group defined by Walker and Doolittle as having dolipore septa proved incorrect because contaminating yeasts had been sequenced instead of the yeast stages of the rusts (PA. Blanz, unpublished data). Based on 5S rRNA data, organisms of unknown systematic position can be grouped with known taxa. 5S rRNA nucleotide sequences allowed placement of Microstroma juglandis among the basidiomycetes (Gottschalk and Blanz 1984) whereas Kabatiella microstricta was shown to be ascomycetous (Gottschalk and Blanz 1985). Agaricostilbum pulcherrimum was the most divergent of all basidiomycetes examined (Blanz and Unseld 1987), while Septobasidium carestianum is related to Phleogena faginea (Blanz and Gottschalk 1986) and the rusts (Miiller

1989). On the basis of 5S rRNA sequences, the smut fungi were found to form two distinct groups. One parasitizes dicotyledonous host plants while the other parasitizes grasses (Blanz and Gottschalk 1984). The profound genetic divergence between these two groups of smuts is consistent with differences in morphological and chemical characters (G. Demi, personal communication). The affiliation of Graphiola phoenicis with the graminicolous smuts was shown from its 5S rRNA nucleotide sequence (Blanz and Gottschalk 1986). The limited similarity of the 5S rRNAs of Rhodosporidium malvinellum and Rhodosporidium toruloides (Gottschalk and Blanz 1985) was confirmed by Yamada et al. (1989a) from 18S and 26S rRNA partial nucleotide sequences. From these results, they transferred R. malvinellum to the new genus Kondoa (Yamada et al. 1989a). Among ascomycetous yeasts, Komiya et al. (1981) determined the 5S sequence of Schizosaccharomyces pombe, and Mao et al. (1982) noted that it differed sufficiently from that of Saccharomyces cerevisiae to suggest that these two organisms are phylogenetically quite divergent. Similar results were obtained by Walker (1985a) who fiirther showed the ascomycetes to be divided among three groups: (1) Schizosaccharomyces and Protomyces, (2) budding yeasts, and (3) filamentous fungi. Despite the importance of these phylogenetic studies, the 5S rRNA molecule is losing its prominence and is being replaced by the informationally richer 18S and 26S rRNA molecules which can now be easily sequenced. 3.4. 5.8S rRNA With about 160 nucleotides, the 5.8S rRNA molecule is not much larger than 5S rRNA. Unlike the latter molecule, 5.8S rRNA contains modified nucleotides as do the 18S and 26S rRNA molecules. Consequently, when enzymatic sequencing is used as was done for 5S rRNA, the modified nucleotides are sometimes difficult to determine. Despite these disadvantages, several 5.8S nucleotide sequences have been analyzed, but only a few phylogenetic comparisons have been deduced from these data (Walker 1985b). More 5.8S rDNA data will become available as the ITS regions of the rDNA tandem repeats are analyzed because the 5.8S rRNA gene is located between the ITS regions. 3.5. Small subunit and large subunit rRNA/rDNA sequences 3.5.1. Close relationships: The compilation of large subunit RNA sequences by Gutell and Fox (1988) demonstrated the 5' end of this molecule to be quite variable and of potential use for detection of closely related species. Peterson and Kurtzman (1991) examined sequence divergence in this region for sibling species pairs from several yeast genera. These data showed that nucleotide differences in region 25S-635 (domain D2, Guadet et al. 1989) are sufficient to separate nearly all

10. Ribosomal RNA/DNA sequence comparisons for assessing phylogenetic relationships / C.R Kurtzman and P.A. Blanz

71

Table 13 Extent of ribosomal RNA sequence divergence among sibling yeast species ^ Species pair

Percent nDNA relatedness^

Percent nucleotide differences in region 258-635^

Heterothallic species Saccharomyces cerevisiae x S. pastorianus

58

Saccharomyces cerevisiae x S. bayanus

10

5.4

5.4

Saccharomyces pastorianus x S. bayanus

70

0.0

Pichia mississippiensis x P. amylophila

25

2.0

Pichia bimundalis x P. americana

21

1.0

Issatchenkia scutulata x var. exigua

25

5.1

Debaryomyces melissophilus x D. sp. n.

30

0.7

Saturnispora saitoi x S. ahearnii

30

2.0

Williopsis saturnus x var. sargentensis

43

0.0

Homothallic species

^ Data from Kurtzman (1984b, 1987b), Kurtzman and Robnett (1991), Kurtzman et al. (1980a,b), Liu and Kurtzman (1991), Peterson and Kurtzman (1990, 1991), Vaughan-Martini and Kurtzman (1985). ^ Conspecific strains generally exhibit in excess of 70% nuclear DNA relatedness. Varietal designations have been accorded those strains showing 40-70% nDNA relatedness unless genetic comparisons demonstrate the absence of interfertility. /. scutulata and its variety exigua show some intervarietal fertility and, at 25%) DNA relatedness, appear to be exceptional because limited fertility would not be expected. ^Ca. 300 nucleotides in region 25S-635 (= region D2).

sibling species (Table 13). One exception is the pair Saccharomyces hayanus/S. pastorianus. It is believed that the latter species arose as a partial amphidiploid following chance hybridization between S. cerevisiae and S. bayanus, and that it retains the rDNA of S. bayanus (Kurtzman and Robnett 1991, Peterson and Kurtzman 1991, Vaughan-Martini and Kurtzman 1985). Williopsis saturnus and its variety sargentensis, which show no nucleotide differences in the region sequenced, are insufficiently studied to comment on their apparent lack of divergence (Liu and Kurtzman 1991). Some sibling species pairs show a five-fold difference in substitutions over that of other pairs, but this may not be definitive evidence for proposing unequal rates of nucleotide substitutions among species until the genetic processes that initiate species formation are better understood. With few exceptions, the D2 region is sufficiently variable to recognize ascomycetous and basidiomycetous yeast species, including most sibling pairs. Conspecific strains ordinarily show 0 - 1 % divergence in this region, whereas the distantly related species Pichia bimundalis and Schizosaccharomyces japonicus var. uersatilis exhibit ca. 47% substitutions (Peterson and Kurtzman 1991). 3.5.2. Distant relationships: 3.5.2.1. Ascomycetous yeasts: The phylogeny of the ascosporogenous yeasts has been vigorously debated since the time of Guilliermond (1912) and before. Some have viewed the yeasts as primitive fimgi while others perceived them to be reduced forms of more evolved taxa. Cain (1972) has been a proponent of this latter idea, arguing that hat- (galeate)-spored genera such as Pichia and Cephaloascus are likely to be reduced forms of

the perithecial euascomycete genus Ceratocystis. Redhead and Malloch (1977) and von Arx and van der Walt (1987) accepted this argument and commingled yeasts and mycelial taxa in their treatments of the Endomycetales and Ophiostomatales. Examination of rRNA/rDNA sequence divergence from a limited number of taxa indicated the ascosporogenous yeasts, with the exception of Schizosaccharomyces, to form a monophyletic group (clade) distinct from the filamentous species (Barns et al. 1991, Bruns et al. 1991, Hausner et al. 1992, Hendriks et al. 1992, Kurtzman 1993a, 1994, Nishida and Sugiyama 1993, Walker 1985a, Wilmotte et al. 1993). Kurtzman and Robnett (1994a) analyzed rRNA sequence divergence from type species of all cultivatable ascomycetous yeasts and yeastlike taxa. This work demonstrated the yeasts, as well as yeastlike genera such as Ascoidea and Cephaloascus to comprise a clade sister to the "filamentous" ascomycetes (euascomycetes). Schizosaccharomyces, Taphrina, Protomyces and Saitoella form a divergent clade basal to the yeast-euascomycete branch. Eremascus, which forms asci unenclosed in a fruiting body, aligned with the euascomycete clade. These results substantiate the long-held observation that yeasts cannot be recognized solely on the basis of presence or absence of budding. Such members of the yeast clade as Ascoidea, Eremothecium (and its synonym Ashbya) show no typical budding, whereas Aureobasidium, Phialophora and certain other genera of euascomycetes are usually dimorphic. Budding is also a common mode of vegetative reproduction among many basidiomycetous genera. Similarly, vegetative reproduction by fission is shared by Dipodascus and Galactomyces, members of the yeast clade, as well as by the distantly related genus

72

///. Ultrastructural and molecular properties used for yeast classification

Schizosaccharomyces. Sexual states of all members of the yeast clade are characterized by asci unenclosed in a fruiting body. This feature is shared by only a few taxa outside the yeast clade such as Eremascus and Schizosaccharomyces. Myriogonium and Trichomonascus form unenclosed asci but may be euascomycetes. The impact of rRNA/rDNA comparisons on the taxonomy of ascomycetous yeasts is just beginning. Additional work is required to evaluate the assignment of species to genera and the relationships among genera. However, major findings to date include: (1) yeasts and yeastlike species are phylogenetically separate from the euascomycetes, (2) the fission yeast genus Schizosaccharomyces is phylogenetically distant from the "budding" yeast clade and from the euascomycetes, resulting in the reassignment of the fission yeasts to a separate order, the Schizosaccharomycetales (Eriksson et al. 1993, Kurtzman 1993 a) and, (3) the demonstration that many phenotypic characters such as ascospore morphology are poor indicators of phylogeny (Kurtzman and Robnett 1991, 1994b, Liu and Kurtzman 1991). In a number of cases, these findings have been used to redefine taxa, and additional details may be found in the treatments of Debaryomyces, Eremothecium, Lipomyces, Pichia, Saturnispora and Williopsis. On the basis of rDNA sequence comparisons, Nishida and Sugiyama (1993) suggested the name Archiascomycetes for the clade comprising Schizosaccharomyces, Saitoella, Taphrina, Protomyces and Pneumocystis. 3.5.2.2. Basidiomycetous yeasts: Two morphologically distinct teleomorph states are found among the basidiomycetous yeasts (Fell and Kreger-van Rij 1984, Boekhout et al. 1993). In the first, teliospores are formed and germinate to produce a basidium (metabasidium) that bears basidiospores. This type of sexual cycle shows considerable similarity to the rust and smut fungi. The second type of sexual state lacks teliospores. Basidia develop on hyphae or yeast cells and give rise to basidiospores in a manner similar to the Tremellales (jelly fiingi). Additionally, taxa may be defined from presence or absence of carotenoids, ballistoconidia, type of hyphal septum (simple or the ultrastructurally more complex dolipore), and cellular xylose, which evidently arises from extracellular polysaccharides (Golubev 1991a). Gueho et al. (1989) presented an overview of phylogeny of basidiomycetous yeasts from measurements of divergence among partial sequences of large and small subunit rRNAs. Three major groups were resolved: (1) teliospore formers with hyphae having simple septal pores, (2) teliospore formers with hyphae having dolipore septa and, (3) non-teliospore formers with hyphae having dolipore septa. Relative to other taxonomic groups, the basidiomycetous yeasts appear to be a sister group to the Agaricales (Berbee and Taylor 1993). At present, the most extensive phylogenetic comparison of basidiomycetous yeasts is that by Fell et al. (1992)

who examined 117 species assigned to 23 genera. A 247nucleotide segment in the D2 region was sequenced. Although this region resolves closely related species, it has too few phylogenetically informative sites to accurately assess more distant relationships. Nonetheless, the analysis generally supports the concept that taxa assigned to the Tremellales are characterized by dolipore septa and cellular xylose, whereas taxa placed in the Ustilaginales form teliospores, have simple septal pores, and lack cellular xylose. Some exceptions were noted. The teleomorphic genus Erythrobasidium does not form teliospores as do other members of the clade, but Cystofilobasidium and Mrakia, both members of the Tremellales, do form teliospores. Ballistoconidia and carotenoids are found among many genera of the basidiomycetous yeasts, suggesting these traits to be ancestral, but not always expressed, thus rendering them of little value for defining taxa. These conclusions were also drawn by Nakase et al. (1993). Heterogeneity of coenzyme Q composition occurs in many currently defined genera and will require additional study before its taxonomic significance is fiilly understood. rRNA/rDNA sequence analyses demonstrated Rhodotorula, Sporobolomyces, Cryptococcus, and Bensingtonia to be polyphyletic, fiirther confirming that commonly used phenotypic characters are insufficient for defining anamorphic genera. Additional comparisons of basidiomycetous taxa can be found in the studies by Blanz et al. (1989), De Wachter et al. (1992), Fell and Kurtzman (1990), Gueho et al. (1990), Laaser et al. (1989), Nakase et al. (1991a), Sugiyama and Suh (1993), Suh and Sugiyama (1993b), Van de Peer et al. (1992), Yamada and Kawasaki (1989a), Yamada and Nakagawa (1990), and Yamada et al. (1989a,b, I990a,b). A strong start has been made to understand the phylogeny of basidiomycetous yeasts from rRNA/rDNA sequence comparisons, but additional sequencing must be done to better resolve taxa. This will include sequences of greater length as well as inclusion of all known species of a group. For example, the anamorphic genera Tsuchiyaea and Ballistosporomyces, which were recently defined from differences in partial sequences, may overlap with some earlier described genera (Fell et al. 1992). 4. Reliability of rRNA gene trees to infer phylogeny Calculations of phylogenetic distances from changes in the sequences of macromolecules require that substitutions occur at a predictable rate and preferably one that is constant as well. Ochman and Wilson (1987) reported that nucleotide substitutions in small (16-18S) subunit rRNAs from both prokaryotes and eukaryotes proceed at the same rate (l%/50 million years). Other workers, however, have presented evidence that rates of nucleotide substitution differ among phylogenetic groups and possibly among species within groups (Britten 1986, Field et al. 1988,

10. Ribosomal RNA/DNA sequence comparisons for assessing phylogenetic relationships / C.R Kurtzman and P.A. Blanz Saccharomyces cerevisiae

- SacctKjromyces cerevisiae Pichia guiiliermorKiii 99 p Debaryomyces melissophiius ^^^5—T^ Debaryomyces sp.n. Cond/do fermer)ticarer)s Pichia media '\§]f Pichia castiiiae - Pichia haptophiia - Debaryomyces (Pichia) carsonii - Pichia stipitis

' Pichia guilliermondii

I

100

Detxjryomyces melissophilus

Debaryomyces sp.n.

Debaryomyces (Pichia) carsonii —

Debaryomyces (Piciiia) etchelisii —

Debaryomyces (Schwanniomyces) occidentaiis

I— Debaryomyces yamadae r Debaryomyces pseudopofymorphus M

Debaryomyces polymorphus Debaryomyces var)ri}i

•- Debaryomyces casteliii r- Debaryomyces har)ser)ii '— Debaryomyces marama Debaryomyces nepaiensis h Debaryomyces coudertii I f - Debaryomyces (Wingea) robertsiae '67J

- Debaryomyces udenii

12>

B

Pichia farir)osa - Candida multigemmis iir Candida oieophiia 79 ^ Candida railensis 100 100 I Candida bo/effcofa ' — Candida schatavii 1811 Candida santamariae ^ — Candida zeylanoides J — Candida quercitrusa ' — Candida nataiensis - Debaryomyces (Pichia) etchelisii - Debaryomyces (Schwanniomyces) occidentaiis T— Debaryomiyces yamadae 67 r Debaryomyces pseudopolymorphus I -P-Debaryomyces polynK)rphus LZiJ ^Debaryomyces vanriji '- Debo/yom/ces casteliii r- Debaryomyces hansenii — Debaryomyces marama J- Debaryomyces coudertii "[731- Debaryomyces (Wingea) robertsiae P - Debaryomyces udenii |52r Debaryomyces nepaiensis •— Candida psychrophila

Fig. 17. Phylogenetic analyses of relationships among species of Debaryomyces and reference taxa. The trees are derived from maximum parsimony (PAUP) analysis of ca. 600 nucleotides from the 5' end of large subunit rDNAs. Branch lengths are proportional to nucleotide differences, and the numbers given on branches are the percentage of frequencies with which a given branch appeared in 100 bootstrap replications. Values less than 50% are not given. (A) Phylogenetic tree comprised of described Debaryomyces species and two reference taxa. (B) Phylogenetic tree as in A, but with eighteen reference taxa. D. carsonii, D. melissophilus and Debaryomyces sp. n. are separated from other members of Debaryomyces in this analysis. (C.P Kurtzman and C.J. Robnett, unpublished data).

Weisburg et al. 1989). Methods for calculating evolutionary relationships based on macromolecular changes have been described (Avise 1989, Felsenstein 1988, Holmquist et al. 1988, Lake 1987, Saitou andNei 1987, Woese 1987), and some of the algorithms are designed to compensate for disproportional rates of substitution, but there still appears to be uncertainty concerning their reliability (Felsenstein 1988). Evolutionary relationships among the bacteria, for example, are still subject to debate (Achenbach-Richter et al. 1988, Gouy and Li 1989, Lake 1987). There are presently only a few comparisons among the yeasts that examine congruence between phylogenies from rRNA gene sequences and those determined from other molecules. Sequence analysis of orotidine 5'-monophosphate decarboxylase by Radford (1993) demonstrated the budding yeasts and the euascomycetes to be sister groups as shown from rRNA/rDNA sequences. One unusual aspect of this work was placement of the Mucorales as a sister group to the basidiomycetes. Tsai et al. (1994) showed phylogenetic relationships among species of Epichloe (Clavicipitaceae) were the same when analyzed from either rDNA sequences or those from the P-tubulin gene. Relationships among species of Dekkera and its anamorph Brettanomyces were essentially identical when analyzed from either nuclear rDNA sequences or from

sequences of the mitochondrially encoded cytochrome oxidase subunit II gene (Boekhout et al. 1994). Another aspect of gene tree reliability is the method used for its construction. Most investigators now analyze data using phylogeny inference programs based on cladistic principles. These programs often include a statistics package to test the robustness of competing phylogenetic trees. Several recent reviews address these important issues (Avise 1989, Felsenstein 1988, HilUs et al. 1994, Saitou and Imanishi 1989). Although evidence is strong that molecular comparisons give an accurate approximation of the evolutionary history of an organism, use of phylogenetic trees for definition of taxonomic hierarchies should be done cautiously. One impediment to interpretation of these data is the issue of missing taxa. Taxa may be excluded either because they are extinct or they have not been recognized in nature. An indication of missing taxa is the presence of long branches on phylogenetic trees, assuming rates of nucleotide substitutions are reasonably constant for all species compared. The taxonomy of Debaryomyces is an example of the problems encountered when there is incomplete sampling of species. On the basis of nucleotide similarities, Kurtzman and Robnett (1991, 1994b) proposed transfer of Schwanniomyces occidentaiis and Wingea robertsiae

74

///. Ultrastructural and molecular properties used for yeast classification

to Debaryomyces, and Yamada et al. (1992d) proposed require attention when using RFLPs. Random amplified transfer of Pichia carsonii and P. etchellsii to this genus. polymorphic DNA (RAPD) is another methodology that A phylogenetic analysis that includes the preceding four is becoming widely used. The technique is based on species with previously described Debaryomyces species amplification of genomic DNA in the presence of one or suggests that Debaryomyces is monophyletic (Fig. 17A). more short (ca. 10-15-mers) oligonucleotide primers of When additional species are included in the analysis, random sequence. The amplified products are visualized D. carsonii, D. melissophilus and Debaryomyces sp. n. are on an agarose gel and strains identified from matching no longer closely allied with other species in the genus band patterns. Hadrys et al. (1992) discussed details of (Fig. 17B). If the circumscription of genera is to be based this procedure noting points of technical difficulty. Poor on monophyly of their assigned species, the preceding reproducibility of band patterns may occur, and apparently three species and other members of their clade represent results from small differences in reagent concentrations a new genus. Before such taxonomic changes are made, and from small variations in thermal cycler temperature all known yeasts need to be sequenced and compared, control. taking into account taxa located on the long branches Fell (1993) applied a three-primer, PCR-based techof phylogenetic trees and their possible effect on genus nique to yeast identification that appears species-specific. circumscription. The reaction mix includes genomic DNA, two external primers for the D1/D2 region of large subunit rDNA, and 5. Rapid molecular methods for yeast a species-specific internal primer. The external primers identification allow amplification of the ca. 600-nucleotide D1/D2 reThe specificity of nucleic acid sequences has prompted gion, but in the presence of a species-specific primer (third development of several methods for rapid species idenprimer), the amplification product is shorter and easily tification. Because these techniques can detect single detected on agarose gel. Other molecular technologies nucleotide changes, they should first be tested on a for identification include development of species-specific large variety of genetically defined strains to understand oligonucleotide probes and the sequencing of speciesspecies variation. Aberrant strains may represent different specific regions of DNA. In this latter concept, it is pracspecies. tical to rapidly identify taxa from their sequences in the The RFLP technique was discussed earlier in the review 600-nucleotide D1/D2 region because many laboratories and has been used extensively in some laboratories. are beginning to use automated sequencers. Bruns et al. (1991) listed some of the factors that

Part IV

Methods

This Page Intentionally Left Blank

Chapter 11

Methods for the isolation, maintenance and identification of yeasts D. Yarrow Contents 1. 2. 3. 4.

Isolation of yeasts Maintenance of yeast cultures Procedures for the identification of yeasts List of observations and tests included in the standard descriptions 5. List of media, reagents and stains

for acidifying media. The use of organic acids, such as acetic acid, is not recommended for general isolation purposes. Such acids are only slightly dissociated at pH 3.5-4.0 and the high concentrations of undissociated acids have an inhibitory effect on most yeasts. Notable exceptions are Zygosaccharomyces bailii, Z bisporus, Schizosaccharomyces pombe, and some strains of Pichia membranifaciens and similar species. 1.1.1. Solid media for direct isolation: When yeasts are present in high numbers they may be isolated by plating the material, or suspensions of the material, on either acidified media or media containing antibiotics. Agar in media with a low pH is hydrolysed when autoclaved. Therefore, the sterilized molten agar is cooled to approximately 45''C before a determined volume of acid is added. The medium and acid are rapidly mixed and immediately poured into petri dishes. The addition of approximately 0.7% (v/v) IN hydrochloric acid to YM agar and glucose-peptone-yeast extract agar usually gives the desired pH of 3.7 to 3.8. Although many yeasts can be recovered at pH 3.7, some species, notably those of the genus Schizosaccharomyces, are inhibited by very acid media and are best isolated on moderately acidic media with a pH in the range 4.5 to 5.0. Dilution-plate techniques may be used for quantitative studies. 1.1.2. Liquid media for enrichment purposes: When yeasts are present in low numbers, their isolation may require enrichment using media and conditions which favor the growth of yeasts over other microorganisms. In such cases, material is put into a liquid medium with a pH of 3.7 to 3.8. The development of molds can be restricted by excluding air from the culture by pouring sterile pharmaceutical paraffin over the surface of the media to form a layer about 1 cm deep. This procedure favors the development of fermentative strains, but may fail to recover aerobic strains. An alternative, and preferable, procedure is to incubate the flasks of inoculated media on a rotary shaker (Wickerham 1951). Molds are prevented from sporulating and aggregate in pellets which are outgrown by yeasts. The yeasts may be separated from the molds either by allowing the pellets of mold to settle for a few minutes and then streaking the suspension of yeasts on to agar in petri

77 78 80 98 99

1. Isolation of yeasts Yeasts have been recovered from widely differing aquatic and terrestrial sources, as well as from the atmosphere. Many yeasts occur widely, whereas some appear to be confined to restricted habitats. Yeasts seldom occur in the absence of either molds or bacteria. Consequently, selective techniques are often used for recovery of yeasts, employing media which permit the yeast to grow while suppressing molds and bacteria. The composition of such media is determined by the fact that yeasts are, as a rule, capable of developing at pH levels and water activities which reduce or inhibit the growth of bacteria. Antibiotics may also be used to suppress bacteria. Fungistatic agents for the suppression of molds should be used with caution because such compounds may also inhibit some yeasts. Cultures are usually incubated at 20-25°C because most yeasts are mesophilic; however, temperatures between 4 and 15°C are essential for psychrophilic taxa. Higher temperatures, in the range of 30-37''C, are often required for yeasts that are strictly associated with warm-blooded sources. Certain yeasts, such as species of the genera Cynidomyces and Malassezia, have exceptional nutritional requirements. The reader should consult the chapters dealing with these taxa for details. The medium formulated by Leeming and Notman (1987) allows species of Malassezia to grow well at incubation temperatures between 30 and 35°C. Anyone interested in the recovery of yeasts from natural substrates is also referred to the informative publications of Beech and Davenport (1969, 1971) and Davenport (1980b), which deal with the isolation of non-pathogenic yeasts. The pubHcations of Buckley (1971) and Staib et al. (1989) may be consulted for methods of isolating yeasts from clinical specimens. 1.1. Use of acidic media (pH 3.5-5.0) Either hydrochloric acid or phosphoric acid is preferred 77

78

IV Methods

dishes, or by removing suspended pellets by aseptically filtering through a loose plug of sterile glass wool. Both fermentative and non-fermentative strains are recovered by this technique. Wickerham (1969b) described a very useful medium, which he refers to as IM, for isolating yeasts from soil and insect frass. This medium contains Yeast Nitrogen Base plus glucose and six other carbon sources. The pH is not adjusted and drops after inoculation owing to the removal of the ammonium sulfate which is used as a source of nitrogen by the growing organisms. 1.2. Use of media with high concentrations of sugar Most yeasts can grow on media with concentrations of sugar that are high enough to inhibit the development of many bacteria. 1.2.1. Solid media for direct isolation: A medium such as glucose-peptone-yeast extract agar or YM agar containing glucose at a concentration of 30 to 50% is suitable for recovering osmophilic and osmotolerant yeasts from foodstuffs and juice concentrates of low water activity. The selective action of such media can be enhanced by lowering the pH to around 4.5. Osmotolerant yeasts recovered in this way can usually be successfully subcultured on media containing successively decreasing amounts of sugar, for example 30, 10, 4 and 2%. 1.2.2. Liquid media for enriching cultures: Yeasts may also be isolated by cultivation in liquid media such as glucose-peptone-yeast extract broth and YM broth containing from 30 to 50% glucose. Osmotolerant molds are not inhibited at these sugar concentrations, therefore incubation on a rotary shaker is recommended. Wickerham (1969b) described another useful medium for the isolation of yeasts from soil and insect frass. This medium, which he refers to as D-20, contains Difco Yeast Nitrogen Base, 20% glucose, 0.1% yeast extract and 0.1% malt extract. 1.3. Use of antibiotics and other inhibitory or selective compounds Several media containing antibiotics have been described for the isolation of yeasts (Davenport 1980b) and these can be employed as a last resort when other means have failed. Such media may have been compounded for the isolation of a particular genus, species, or of yeasts with a particular property. These techniques rely on the use of antibiotics and either other inhibitors or selective carbon and nitrogen sources. Van der Walt and van Kerken (1961a) described isolating species of Dekkera using media containing cycloheximide and sorbic acid at pH 4.8. Van Dijken and Harder (1974) used a medium containing methanol as the sole carbon source, plus cycloserine and penicillin G to inhibit the growth of bacteria, for the isolation of yeasts able to utilize methanol. KwonChung et al. (1978) describe a medium for the isolation

of Filobasidiella neoformans containing creatinine as nitrogen source and diphenyl to reduce the growth of molds. Another medium for the selective isolation of this species contains Niger seed {Guizotia abyssinica), which gives pigmented colonies, and penicillin, streptomycin and gentamicin for the suppression of bacteria (Staib et al. 1989). Beech et al. (1980) reviewed the use of antibiotics such as cycloheximide, aureomycin, chloramphenicol, and penicillin in media for the isolation of yeasts. 1.4. Use of membrane filters Yeasts may be recovered from liquid substrates (and from solid substrates by first washing them to suspend the yeast cells) by passing the liquid through membrane filters (Mulvany 1969) and then incubating the filters on the surface of a selective agar medium. This technique is particularly useful for recovering yeasts when they are present in very low concentrations. 1.5. Purification of yeast cultures Isolates are obtained in pure culture from enriched cultures by streaking on a suitable medium, such as glucosepeptone-yeast extract agar and YM agar. Persistent bacterial contamination can be eliminated by acidifying the media or by adding antibiotics. These primary plates are inspected, preferably under low magnification, for the presence of colonies of more than one form. Single, well separated colonies of each form are selected and streaked again. Twice is generally sufficient to obtain pure cultures, but sometimes it may be necessary to streak colonies several times. It must be borne in mind, however, that where two or more forms persistently appear after the replating of a single colony, they may be morphological or sexual variants of a single yeast. In such cases it is necessary to examine the different forms in detail and take into account the possibility that they represent mating types. 2. Maintenance of yeast cultures Yeast cultures are best maintained on a medium which contains glucose as the only source of carbon as this reduces the risk of changes in growth and fermentative patterns due to the selection of mutants (Scheda 1966). The properties of a strain can change within a few days due to such selection when an unstable strain is cultivated on media which contain malt extract, such as malt agar and YM agar. Many basidiomycetous yeasts do not survive well during prolonged storage on a glucose-peptone medium, although they grow well on it. Potato-dextrose agar is suitable when cultures of such yeasts are to be kept for a long time. The majority of yeasts may be stored at temperatures between 4 and 12°C and subcultured at intervals of 6 to 8 months. Some yeasts, for instance Arxiozyma and Malassezia, need to be subcultured every month. Strains of species of Dekkera and Brettanomyces produce excessive amounts of acetic acid; for these it is

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

best to add 1 or 2% calcium carbonate to the medium to neutralize the acid. Nevertheless, these yeasts still need to be subcultured every two months. Some ascogenous and basidiosporous yeasts lose their ability to reproduce sexually when maintained by serial cultivation on laboratory media. Some isolates still sporulate well after 50 or more years in cultivation. However, for many strains, ability to sporulate is either impaired or lost within a period that varies from a few weeks to several years. Because of this, it is best to preserve important strains, such as nomenclatural types and reference strains, with one of the more permanent conservation techniques as soon as possible after acquisition. Suitable techniques are: lyophilization (see Kirsop and Kurtzman 1988), L-drying (Mikata and Banno 1989), and freezing in either liquid nitrogen or a mechanical freezer at temperatures between -60° and -135°C. Freezing is the preferred method at the Centraalbureau voor Schimmelcultures at present; cultures of all strains held have been frozen and recovered from liquid nitrogen and many have been successfiilly kept at -75°C. The preparation of cultures for freezing is simple and quick. The general method as used at the Centraalbureau voor Schimmelcultures is as follows: short lengths of polypropylene drinking straws are sealed at one end, labelled with a black felt-tipped pen (Pentel Permanent Marker), and sterilized in the autoclave at 121°C for 15min. The strain to be frozen is grown for about 24h in 3.0ml of liquid medium on a shaker before adding 1.0 ml of a 60% solution of glycerol in water. An amount of the resulting suspension is pipetted into the straws sufficient to half fill them. The straws are then closed by clamping the open ends in the jaws of a sealing machine for plastic packages. The cultures are then either frozen at approximately -30°C for between 30 and 60min before being placed in the storage tank under liquid nitrogen, or put directly into a freezer cabinet at -75°C. Sterile plastic ampoules suitable for use in liquid nitrogen are commercially available but are more expensive and take up more storage space.

(4)

(5)

(6)

(7)

(8)

2.1. Media (1) YM broth (yeast extract-malt extract broth). Dissolve 3 g of yeast extract, 3 g of malt extract, 5 g of peptone, and 10 g of glucose in 1 liter of water. The pH reaction of the medium ranges between 5 and 6 depending on the batch of ingredients. The medium is dispensed into containers and autoclaved at 12rC for 15min. This medium is commercially available as Bacto YM Broth (Difco). (2) YM agar (yeast extract-malt extract agar). This medium is prepared by dissolving 20 g of agar in (9) a liter of YM broth. The medium is sterilized by autoclaving at 121°C for ISmin. This medium is commercially available as Bacto YM agar (Difco). (3) Malt extract (after Lodder and Kreger-van Rij 1952). Mix 1kg of malt with 2.6 liters of tap water and

79

heat to 45°C for 3 h with continuous stirring. Then raise the temperature to 63''C for 1 h. Next filter the mixture through cheese cloth. The filtrate is then filtered through paper and diluted to a density of 15° Balling using a flotation meter. The pH is adjusted to 5.4, if necessary, and the medium is sterilized by autoclaving at 115°C for 15min. Commercial products in the form of powder or syrup are available from various suppliers. Malt agar (malt extract agar). Malt extract is diluted to a density of 10° Balling and 2% (w/v) of agar is added. Malt agar, or wort agar, is available commercially in powder form. The medium is sterilized by autoclaving at 115°C for 15min. Glucose-peptone-yeast extract agar (GPY agar). Add 40 g of glucose, 5 g of peptone, 20 g of agar, and 500 ml of yeast infusion to 500 ml of demineralized water and dissolve. Alternatively, 5 g of powdered yeast extract in 500 ml of demineralized water can be substituted for the yeast infiasion. Sabouraud's 4% glucose agar. Dissolve 10 g of peptone and 40 g of glucose in 1 liter of demineralized water, adjust the pH to 7.0 and then add 20 g of agar. Sterilize by autoclaving at 12rC for 15min. Commercial products in dried powder form are available from various suppliers. Niger seed agar 1 (Kwon-Chung et al. 1982b). Dissolve I g of glucose and 20 g of agar in 800 ml of demineralized water and add 200 ml of Niger seed infusion. Chloramphenicol (40 mg/ml) may be added before sterilizing at 121°C for 15min, and diphenyl solution (see below) when the medium has been cooled just before pouring into petri dishes. The Niger seed infiision is prepared by autoclaving 70 g of ground or pulverized seeds of Guizotia abyssinica in 350 ml of demineralized water for lOmin at 110°C and filtering the infiision through gauze. Niger seed agar 2 (Staib et al. 1989). Pulverize 50 g of Niger seed in a blender, boil in 1 liter of demineralized water for 30min, filter through paper, and restore the final volume to 1 liter. Dissolve lOg of glucose, I g of potassium dihydrogen phosphate, Ig of creatinine, and 15g of agar in this solution. Sterilize by autoclaving at 110°C for 20min. Add streptomycin (40E/ml), penicillin (20E/ml), and diphenyl solution (see below) when the medium has cooled to about 50°C. Filobasidiella (Cryptococcus) neoformans produces brown, usually mucoid, colonies after 3-8 days at 25°C. Teeming and Notman agar (LNA) for Malassezia species. Dissolve lOg of bacteriological peptone, 0.1 g of yeast extract, 5g of glucose, 8g of desiccated ox bile, 1 ml of glycerol, 0.5 g of glycerol monostearate, 0.5 ml of Tween 60, 10 ml of wholefat cow's milk, and 12 g of agar in 1 liter of

80

IV Methods

demineralized water. Sterilize by autoclaving at llO^Cfor 15min. (10) Diphenyl solution. Dissolve Ig of diphenyl in 100 ml of 95% ethanol. Add 10 ml aseptically to 1 liter of molten medium when it has cooled to approximately 45°C. Diphenyl is used to inhibit the growth of molds. (11) Yeast infusion. Yeast infusion is prepared by mixing 1 kg of compressed baker's yeast with 5 liters of demineralized water and heating to 50°C for 24 h. Add the whites of 2 eggs to clarify the liquid, shake well and filter through thick paper. Sterilize by autoclaving at 121^C for 15 min. Alternatively, 5 g of powdered yeast extract dissolved in 1 liter of water may be used. 3. Procedures for the identification of yeasts Workers should always convince themselves beyond any doubt that they are dealing with pure cultures before proceeding to the determination of the morphological, sexual, biochemical, and physiological properties of the isolates. 3.1. Characteristics of vegetative reproduction 3.1.1. Modes of vegetative reproduction: Vegetative or asexual reproduction occurs in yeasts by budding, by fission, and by the production of conidia on short stalks called sterigmata. Observing how the conidia are formed (conidiogenesis) can provide information which aids the identification of a strain. Buds may arise either on yeast cells or on hyphal cells. Budding is initiated by the formation of a small evagination or outgrowth at some point on the surface of the cell. The cell remains more or less constant in size during subsequent development, while the bud (blastospore or blastoconidium) increases in size to form a new cell which, usually after some time, separates from the parent (mother) cell. Budding is termed holoblastic or enteroblastic, depending on how the bud is formed in terms of the fine structure of the cell wall. All layers of the wall of the parent cell are involved in the formation of a holoblastic bud, and the bud separates, usually on a narrow base; a scar remains through which no further budding occurs. Von Arx and Weijman (1979) consider holoblastic budding characteristic of the Saccharomycetales and their anamorphic states. When budding is enteroblastic, the first bud arises through a rupture in the wall of the parent cell, through which the inner-most layer evaginates and ultimately grows out to form the outer-most layer of the bud. The site of budding is eventually surrounded by a collarette due to the recurrent formation and abscission of a succession of buds arising from the inner layer of the wall of the cell. Enteroblastic budding is characteristic of basidiomycetous yeasts. Budding is also classed in terms of the position of the site where it occurs. Budding restricted to one pole

Fig. 18, Monopolar budding (from van der Walt and Yarrow 1984a).

Fig. 19. Bipolar budding (from van der Walt and Yarrow 1984a).

of the cell is termed monopolar (Fig. 18); budding at both poles of the cell is termed bipolar (Fig. 19). When the buds are abstricted on a rather broad base by the formation of a cross wall, the process is referred to as "budding on a broad base" and "bud fission". Recurrent budding leads to the formation of multiple scars or annellations at the poles of the cell (Streiblova 1971). Bipolar budding is characteristic of the apiculate yeasts. Budding from various sites on the cell is termed multilateral or multipolar (Fig. 20). Budding is also described in terms of the way successive buds are produced. Sympodial budding is on a conidiophore that extends in growth by a succession of apices. A conidium is produced at each apex and the growth continues to the side of the apex; the result is a zigzag appearance (see Sympodiomyces, p. 603). Acropetal budding is the formation of successive buds in a chain with the youngest at the apex. Basipetal budding is the formation of successive buds with the oldest at the apex. Reproduction by fission is the duplication of a vegetative cell by means of a septum growing inwards from the cell wall to bisect the long axis of the cell. The newly formed fission cells, which are arthroconidia (arthrospores), elongate and the process is repeated. Recurrent fission by a cell may give rise to transverse multiple scars or annellations (Streiblova 1971). This

Co

Fig. 20. Multilateral budding (from van der Walt and Yarrow 1984a).

Q:^ Fig. 21. Fission (from van der Walt and Yarrow 1984a).

Fig. 22. Conidia on stalks (from van der Walt and Yarrow 1984a).

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

manner of reproduction is characteristic of the genus Schizosaccharomyces (Fig, 21). Reproduction by the formation of conidia borne on stalk-Hke tubular structures is uncommon among the yeasts. It entails the formation by a cell of one or more tubular protuberances, each of which gives rise to a terminal conidium (Fig. 22). On maturation the conidium is disjointed at a septum either in the mid-region of the tube (e.g., Sterigmatomyces) or close to the bud (e.g., Fellomyces). The conidia are not forcibly discharged. Yeasts may also reproduce by the formation of more or less filamentous structures consisting of either pseudohyphae or true hyphae (see section 3.1.2.2) and the formation of forcibly discharged spores or ballistospores (see section 3.1.2.6). 3.1.2. Characteristics of vegetative cells: 3.1.2.1. The morphology of vegetative cells: Cells can be globose, subglobose, ellipsoidal, ovoidal, obovoidal, cylindrical, botuliform, bacilliform, elongate, apiculate, ogival, lunate, or triangular. Definitions and illustrations of the various possibilities can be found in Ainsworth and Bisby's Dictionary of the Fungi (Hawksworth et al. 1983, 1995). The shape may reflect the mode of reproduction and, in some cases, it is a characteristic of particular genera or species. Some examples are: the lemon-shaped cells of the apiculate yeasts Hanseniaspora and Wickerhamia, the bottle-shaped cells of Malassezia, the triangular cells of Trigonopsis, and the lunate cells of Metschnikowia lunata and Candida peltata. Methods (1) Growth in liquid media. The morphology of cells is examined in cultures grown in liquid media; the most generally used are: glucose-peptone-yeast extract broth, malt extract, and YM broth. Cells from a young actively growing culture are inoculated into 30 ml of medium in a 100-ml, cotton-plugged Erlenmeyer flask and incubated for 2-3 days. Some workers use tubes with a diameter of 16 mm containing 5 ml of medium. Incubation is normally at 25°C, but some strains may require other temperatures. The culture is then examined, noting the shape of the cells, their mode of reproduction, whether they are single, in pairs, or aggregated in large clumps. The length and breadth of at least 20 cells are measured and the extreme values noted. The characteristics of the culture are noted when the cells are examined and again after 4 weeks, usually at either room temperature or 20°C. The growth of yeasts in liquid media can result in the formation of a compact, coherent, flocculent or mucoid sediment, a ring, floating islets or a pellicle. The pellicle, if formed, can be dry, moist, dull, glistening, smooth, wrinkled, or creeping up the sides of the flask. It is either formed rapidly and is present at the first inspection or it is not present until the second inspection and, even then, it may not completely cover

81

the surface of the medium. Should the yeast form true hyphae copiously, these may produce a thick tenacious growth. This sometimes results in the contents of the flask or tube becoming a mucoid mass. Liquid media are unsuitable for cultivating some yeasts, notably Malassezia and Oosporidium species. (2) Growth on solid media. Solid media are sometimes used as well as, or as an alternative to, liquid media for the examination of the morphology of cells. The most commonly used media are glucose-peptoneyeast extract, malt, morphology, and YM agars. A slant or, if morphology agar is used, either a Dalmau plate or an agar-covered slide, is inoculated with cells from a young actively growing culture. (See the next section for the preparation of Dalmau plates and slides.) The slants, plates or slides are incubated for 1-7 days and then the characteristics of the culture are noted. The cell morphology, as described in the previous section, is also examined in some laboratories. The following features of the appearance of cultures are recorded: Texture: whether mucoid, fluid or viscous, butyrous, friable, or membranous. Mucoid growth is frequently associated with encapsulation of cells as a result of the production of extracellular polysaccharides; membranous growth generally results from profiise formation of filaments. Color, any distinctive colors, such as yellow, orange and red are recorded. The presence of red, orange or yellow non-diffiisible carotenoid pigments is characteristic of certain genera, for instance, Phaffia, Rhodosporidium, and Sporidiobolus. Other yeasts, such as Metschnikowia pulcherrima, certain Kluyveromyces species, and some adenine-requiring mutants of Saccharomyces, produce diffusible, noncarotenoid Bordeaux-red pigments. The majority of yeasts, however, produce growth which ranges in color from whitish through cream to buff Color charts are not used by the majority of yeast taxonomists and so the color terminology used in descriptions of yeasts is not consistent. The adoption of a standard terminology such as used in A Mycological Colour Chart (Rayner 1970) is strongly recommended. Surface: whether glistening or dull, smooth, rough, sectored, folded, ridged, or hirsute. Strains which are smooth when first isolated sometimes become rough when kept on agar. This change is, in some cases, accompanied by a change in texture from butyrous to membranous. Changes of this kind have often been observed at the CBS Culture Collection in strains of Candida albicans and C tropicalis which had been maintained on malt agar and glucose-peptone-yeast extract agar for several years. The smooth form could usually be recovered by incubating subcultures at a

82

IV Methods

temperature considerably higher than that normally used, i.e., 37 or 40°C. Elevation: whether the growth is flat or raised. Margin: whether the edge of the streak or colony is smooth, entire, undulating, lobed, erose, or fringed with filaments. Media (1) Malt extract. See p. 79. (2) 2% (w/v) Glucose-peptone-yeast extract broth. Dissolve 20 g of glucose, 10 g of peptone, and 5 g of yeast extract in 1 liter of demineralized water. Sterilize by autoclaving at 1 2 r C for 15min. (3) 2% (w/v) Glucose-peptone-yeast extract agar. Prepare as in (2) and add 20 g of agar per liter of medium. Sterilize by autoclaving at 12 TC for 15 min. (4) Leeming and Notman agar. See p. 79. (5) Cyniclomyces medium. Dissolve lOg of yeast autolyzate (p. 90), 40 g of glucose, 10 g of proteose peptone, and 20 g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 121°C for 15 min. Melt the agar just before use, cool to approximately 45°C, then adjust the pH with I N HCl to between 3.5 and 4.5 (approximately 4.5 ml is required for each 100 ml of medium), and pour into petri dishes. Yeast infusion can be substituted for the water and yeast autolyzate. (6) Malt agar. See p. 79. (7) Malt (extract) agar-2% calcium carbonate. Finely powdered calcium carbonate is sterilized by dry heat (160-180°C) for 2 h and 20 g is added to 1 liter of malt agar. Sterilize by autoclaving at 1 2 r C for 15 min. When preparing slants and plates, the medium must be gently agitated until the agar is on the point of setting, otherwise most of the calcium carbonate will settle to the bottom of the tube or dish. (8) Morphology agar. The composition of this chemically defined medium is given in Table 14 (p. 99). This medium, marketed by Difco Laboratories as Bacto Yeast Morphology Agar, should be prepared according to the instructions on the container. 3.1.2.2. Filamentation: Mature buds can either become detached as discrete cells or remain attached to the parent cell and give rise to either agglomerations or chains of cells. The tendency of some yeasts to form chains of cells results in the formation of pseudohyphae. A pseudohypha is, therefore, defined as a filament composed of a chain of cells which has been formed by budding. Pseudohyphae may be either rudimentary, in which case they consist of cells of similar size and shape, or they may be differentiated into elongated cells, each of which may produce blastospores in a regular and more or less characteristic arrangement. The arrangement of blastospores was used for the differentiation of certain genera in earlier taxonomic systems (see van der Walt 1970a). The form of pseudohyphae can be markedly affected by cultural conditions (van der Walt 1970a). An unusual type of pseudohypha is restricted to some species of Dekkera and is called blastese. This

term describes the so-called germination of blastospores in which the germ-tube results in slender filamentous aseptate elongations (Langeron and Guerra 1939, 1940). This term has been broadened to include the formation of pseudohyphae consisting of a single filamentous cell which does not form septa, but which sometimes branch. Some yeasts produce true septate branching hyphae under suitable conditions. True septate hyphae elongate by continuous growth of the hyphal tip followed by the formation of septa. Septation lags behind the growth of the hyphal tip to such a degree that the terminal cell, measured from tip to first septum, is normally longer than the preceding cell, measured from first to second septum (Wickerham 1951). The fine structure of hyphal septa varies among taxa. Light microscopy does not reveal much detail of the hyphal septa of filamentous yeasts except the presence of visible pore bodies. Since budding and fission sometimes occur concurrently, it is frequently difficult to distinguish true hyphae, pseudohyphae, and intermediate forms. Wickerham (1951) applied three criteria to recognize types of hyphae. He based these criteria on observations of the terminal cells of the filaments. Firstly, true hyphae usually have refractive straight septa that can generally be differentiated by their greater thickness and refractivity from the edges of vacuoles. There is little or no constriction at the septum. The terminal cells are considerably longer than the cells immediately preceding them. Secondly, pseudohyphae do not have discernible septa, and the ends of intercalary cells are curved and not refractive. There are marked constrictions where the cells join. The terminal cell is, as a rule, shorter than or nearly as long as the adjacent cell. It is rare to find a pseudohypha with a terminal cell that is distinctly longer than the adjacent cell. Thirdly, only a small proportion of cells are separated by septa in intermediate forms. Hyphae of some yeasts break up or disarticulate to form one-celled arthrospores (also called arthroconidia) (Fig. 23). Arthrospores formed in this way on solid media are frequently arranged in a characteristic zigzag fashion. Hyphae may show modifications apart from simple branching. They include the formation of lateral conidia on differentiated conidiogenous cells. The presence of conidia on denticles is a characteristic of Stephanoascus species and Pichia burtonii. Conidiogenous cells showing repetitive monopolar budding are a characteristic of Ambrosiozyma cicatricosa. Hyphae of some species form clamp connections. Clamps arise by outgrowths on the hypha at cell division and connect the two cells that result from the division. Their purpose is to ensure that daughter nuclei, that form during nuclear division, are both transferred to the new cell. One daughter nucleus migrates through the clamp and the other through the hypha. Some strains have incomplete clamps, i.e., the clamp does not connect to the new hyphal cell. This occurs when the nuclei fail to divide. Clamps are characteristic of the dikaryotic

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

0 O 0

Fig. 23. Arthrospores (from van der Walt and Yarrow 1984a).

phase of basidiomycetous taxa. Hyphae are sometimes joined by a process in which there is the fusion of branches of the same or different hyphae, this is called anastomosis. Anastomosing hyphae are a characteristic of Ambrosiozyma platypodis. Methods. The media most commonly employed in routine testing for the formation of filaments are: corn meal (maize) agar, morphology agar, and potato-dextrose agar. Some clinical laboratories use rice agar. (1) Slide cultures. A petri dish containing a U-shaped glass rod supporting two glass microscope slides is sterilized by dry heat at 160-180°C for 2 h. The agar is melted and poured into a second petri dish. The glass slides are quickly removed from the glass rod with a flame-sterilized pair of tweezers and dipped into the molten agar, after which they are replaced on the glass rod. The layer of agar on the back of the slide is wiped off after the agar has solidified. In many laboratories the molten agar is poured onto the glass slides to form a thin layer. After the surface of the agar has dried, the yeast is lightly inoculated in either one or two lines along each slide and a sterile cover slip is placed over part of each line. A little sterile water is poured into the petri dish to prevent the agar from drying out. The culture is then incubated for up to 21 days at either room temperature or another temperature suitable for the strain. The culture is examined microscopically at intervals of a few days for the formation of filaments along the edges of the streak, both under and around the cover slip. (2) Dalmau plates. Agar is poured into petri dishes, which are then put aside for a day or two to allow the surface to dry. The yeast is inoculated as a single streak near one side of the plate (for example from the ten o'clock position to the two o'clock position), and as two points

83

near the other side of the plate (for example at the four and eight o'clock positions). A sterile cover slip is placed over the center of the streak and another over one of the point inoculations. The cultures are incubated and examined in the same way as slide cultures. Media (1) Corn meal (maize) agar. Heat 42 g of maize in 1 liter of demineralized water at 60°C for 1 h, filter through paper then restore the volume to 1 liter by adding water. Add and dissolve 12 g of agar. Sterilize at 121°C for 15min. Commercial products are available from various suppliers. (2) Potato-dextrose agar. An infiision of potatoes is prepared by soaking 300 g of washed, peeled, and finely grated or homogenized potato in 900 ml of water overnight in a refrigerator. The resulting infiision is filtered through cheese cloth and autoclaved at 110°C for 1 h. Dissolve 20 g of glucose and 20 g of agar in 230 ml of potato infusion and 770 ml of demineralized water. Sterilize by autoclaving at 121°C for 15min. Commercial products are available from various suppliers. (3) Rice agar. Simmer 20 g of unpolished rice in 1 liter of water for 45 min, filter, and add water to restore the volume to 1 liter. Add and dissolve 20 g of agar. Sterilize by autoclaving at 121°C for 15 min. Commercial products are available but the results obtained with them are usually inferior to those obtained with the medium freshly prepared with rice infiision. (4) Morphology agar, see p. 82. 3.1.2.3. Formation of asexual endospores: Asexual endospores are not commonly formed, but they have been observed in strains of the genera Trichosporon, Candida, Cryptococcus, Oosporidium, Cystofilobasidium, and Leucosporidium. Endospores are vegetative cells which are formed within discrete cells and hyphae. Unlike chlamydospores and ascospores, endospores cannot be stained selectively. They are usually observed in old cultures on YM agar, malt agar, potato-dextrose agar, and corn meal agar kept at room temperature. No special media have been devised to stimulate the development of endospores. The publication by do CarmoSousa (1969b) should be consulted for a more detailed discussion of endospores. 3.1.2.4. Formation of chlamydospores: The chlamydospore has been defined as a thick-walled non-deciduous, intercalary or terminal, asexual spore formed by the rounding off of a cell or cells (Ainsworth 1971). The asexual nature of the chlamydospore distinguishes it from the teliospore of the Sporidiales and Ustilaginales from which the basidium is produced. As chlamydospores are generally rich in lipids, they are well adapted to maintain vitality through periods of dormancy. Mature chlamydospores have particular

84

IV Methods

affinities for certain dyes and, in contrast to normal vegetative cells, are markedly acid-fast on staining, a characteristic shared by ascospores (van der Walt 1970a). It can be observed in older cultures that these cells shed their outer layers just before or during germination. Chlamydospores are characteristic of Candida albicans and Metschnikowia species, but are also occasionally noticed in old cultures of other taxa on agar, including some Trichosporon and Cryptococcus species. However, chlamydospores fulfill a dual function in the genus Metschnikowia as they germinate giving rise either to budding diploid cells or to asci. The production of chlamydospores by Candida albicans is best observed in slide cultures on rice agar; corn meal agar also gives good results with some strains. Some laboratories add Tween 80 (1%) to these media. 3.1.2.5. Formation of germ tubes by Candida albicans'. The formation of germ tubes is accepted by many medical laboratories as a reliable means of rapidly identifying Candida albicans (Stenderup and Thomsen 1964, Ahearn et al. 1966, Joshi and Gavin 1974). A germ tube is a thin filamentous outgrowth without a constriction at its point of origin on the cell. The formation of germ tubes is influenced by temperature, inoculum, medium, and strain. Ogletree et al. (1978) evaluated the various techniques of inducing their formation. Method. A simple method of testing for germ tubes is to suspend cells from a 24-hour-old culture (10^-10^ cells per ml) in either normal blood serum or egg albumin. The cells are examined microscopically after incubation a t 3 7 T f o r 1-3 h. 3.1.2.6. Formation of ballistospores: The formation of forcibly discharged asexual spores, known as ballistospores or ballistoconidia, is a specialized mode of reproduction which is encountered in some basidiomycetous genera, such as Sporidiobolus, Bullera, and Sporobolomyces. Ballistospores are produced on sterigmata that protrude from vegetative cells (Fig. 24) and are discharged into the air by the so-called droplet mechanism (Kluyver and van Niel 1924). Methods. Ballistospores are generally detected as a mirror image of the culture formed by the discharged spores on the lid of an inverted petri dish. Suitable media are: corn meal agar, malt agar, morphology agar, and potato-dextrose agar. Do Carmo-Sousa and Phaff (1962) described the following procedure. Inoculate a petri dish containing 10 ml of corn meal agar in two lines at right angles across the diameter. The dish is inverted over the bottom of another petri dish containing malt agar on which a sterile slide has been placed. One of the lines is positioned over the slide and the halves of the two dishes are taped together. The culture is incubated at 18 to 20°C. Discharged spores germinate to form colonies on the bottom dish and are collected on the glass slide, which can be removed for examination under the microscope.

Fig. 24. Ballistospores (from van der Walt and Yarrow 1984a).

Media (1) Malt agar, see p. 79. (2) Potato-dextrose agar, see p. 83. (3) Corn meal agar, see p. 83. (4) Morphology agar, see p. 82. 3.2. Characteristics of sexual reproduction Many yeasts reproduce sexually, resulting in an alternation of generations with the formation of characteristic cells in which reduction division takes place. In the ascogenous yeasts, the site of meiosis is the ascus where the haploid generation of ascospores is formed by so-called 'freecell' formation, i.e., the process by which the cytoplasm surrounding the meiotic nuclei becomes enveloped by a wall. In the basidiomycetous yeasts, reduction division is restricted to either the teliospore or the basidium on which the haploid basidiospores are formed externally. A yeast that forms either asci or basidia has been referred to as either a perfect yeast or as having a perfect state. A yeast that does not form either asci or basidia has been referred to as an imperfect yeast or as an imperfect state. In current mycological parlance the perfect state is termed the teleomorphic state or teleomorph, the imperfect state is termed the anamorphic state or anamorph, and the combined states are termed the holomorph. The teleomorph and anamorph of the same yeast can have different names, for instance Pichia jadinii (teleomorph) and Candida utilis (anamorph) are states of the same yeast. The holomorph has the same name as the teleomorph, i.e., Pichia jadinii in this example. However, only the teleomorph of many species has been named, the anamorph has not been named separately in an imperfect genus. 3.2.1. Characteristics of ascospore formation: Ascogenous yeasts can be either homothallic or heterothallic, and the vegetative phase is normally either diploid or haploid or a mixture of the two. The existence of higher degrees of ploidy has also been reported. In haploid homothallic yeasts, plasmogamy, karyogamy, and meiosis occur within the zygote, which is generally formed by two vegetative cells fusing. This diplophase is transient, being restricted to the diploid zygote within which the ascospores are formed. Such a life cycle is termed haplontic. One mode of diploidization involves a haploid vegetative cell which undergoes mitosis and forms a bud. The bud remains attached to the parent cell which is converted into an ascus in which usually 1 to 4 ascospores

85

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

^

25

26

27

28

Fig. 25. Ascus formed by parent-bud (mother-daughter) cell conjugation. Fig. 26. Conjugated ascus. Fig. 27. Ascus with abortive conjugation tube. Fig. 28. Unconjugated ascus. (From van der Walt and Yarrow 1984a.)

are formed (Fig. 25). Asci bearing such vestigial buds are found in the genus Debaryomyces, and some species of the genera Torulaspora and Pichia. Kreger-van Rij and Veenhuis (1975a, 1976b) and Kreger-van Rij (1977a) maintain that the bud is abstricted, with subsequent dissolution of the cross wall which separates the two cells, before the two daughter nuclei fuse. Van der Walt et al. (1977) take the view that abstriction of the bud is not a prerequisite of the process. This mode of ascus formation is referred to as conjugation between a cell and its bud (mother-daughter cell conjugation) or bud-meiosis. As the process involves the fusion of two sister nuclei, it does not constitute heterogamy. Strains of species in which diploidization is effected exclusively by this process would be predominantly inbreeding because conjugation between a cell and its bud does not involve the fusion of independent cells. A process comparable to cell-bud conjugation appears to operate in the genus Nadsonia, where karyogamy is effected by the fusion of the nuclei of a bud and its parent. The contents of the zygote move into a third bud at the opposite pole. The second bud, which is abstricted by a septum, becomes the ascus. Diploidization may also be brought about by the fusion of two independent haploid cells. The cells themselves may fuse giving rise to amoeboid conjugated asci as in Schizosaccharomyces. Alternatively, the cells may form elongated copulatory processes, or conjugation tubes, which fuse to give dumbbell-shaped asci (Fig. 26) as in Zygosaccharomyces. Occasionally the conjugation tubes fail to fiise. Cells bearing such abortive conjugation tubes nevertheless sometimes convert into asci with 1 or 2 spores (Fig. 27). In this event, it is presumed that the haploid nuclei of such cells undergo mitosis and the sister nuclei fuse in a manner comparable to that in conjugation between a parent cell and its bud. The process constitutes somatogamous autogamy because the protuberance is not abstricted from the cell. Asci bearing either vestigial buds or abortive conjugation tubes may be formed concomitantly, for instance in Debaryomyces and Torulaspora. In homothallic yeast strains with a diploid vegetative phase, a single diploid vegetative cell may undergo reduction division and become an unconjugated ascus (Fig. 28) as in the genus Saccharomyces. The diploid condition is soon restored, either by germinating ascospores

conjugating within the ascus, or by daughter nuclei fusing autogamously at the conclusion of the first mitotic division within a germinating ascospore (Winge and Laustsen 1937). The latter process has been referred to as direct diploidization or autodiploidization. The haploid phase is of very short duration in such a cycle and is restricted to the ascosporal stage. A life cycle characterized by these features is referred to as diplontic. When some zygotes, in the case of the haplontic cycle, proceed to reproduce mitotically, or when, in the case of the diplontic cycle, diploidization of the ascospores is delayed, the result is a vegetative phase consisting of both diploid and haploid cells. Such a mixed vegetative phase then gives rise to conjugated as well as unconjugated asci. The diploid cells of heterothallic strains are normally heterozygous for the mating-type genes and bisexual. The existence of unisexual diploid strains has been reported (Wickerham 1958, Oshima and Takano 1972). The asci remain unconjugated and unisexual haploid ascospores of both mating types are formed if the diplophase is stable. Ascospores of opposite mating type either conjugate within the ascus giving rise to the diplophase, as in Saccharomycodes, or the ascospores germinate giving haploid vegetative cells which can be of opposite mating types. Normally the diplophase can only be restored if conjugation of haploid cultures of opposite mating type occurs, as in Pichia. Active cultures of mating types are not invariably stable and may revert to sporulating cultures as a result of mutation of the mating-type alleles (Hawthorne 1963, Takano and Oshima 1967, 1970). Some species have both heterothallic and homothallic strains; Pichia membranifaciens and Saccharomyces cereuisiae are examples. Heterothallism may also be associated with sexual agglutination, as in Pichia canadensis (Hansenula wingei) and Saccharomyces kluyueri (Wickerham 1956, 1958), in which cells of opposite mating types agglutinate when mixed. Agglutination in Pichia canadensis has been shown to be mediated by complementary glycoproteins present on the surface of cells of the opposite mating types (Brock 1959, Taylor 1965, Crandall and Brock 1968). Winge and Roberts (1954) reported the formation of binucleate ascospores in yeasts which normally remain haploid in single-spore cultures. Wickerham (1958) reported the formation of triploids and tetraploids in

86

IV Methods


Fig. 29. Representative ascospores found among the yeasts: (a) hat-shaped, Pichia anomala; (b) spheroidal and smooth, Saccharomyces cereuisiae; (c) saturnshaped and smooth, Williopsis saturnus; (d) spheroidal and roughened, Debaryomyces hansenii; (e) saturnshaped and roughened, Debaryomyces occidentalis; (f) elongated with terminal appendage, Eremothecium coryli; (g) needle-shaped, Metschnikowia reukaufii.

The ascospores may be pigmented in genera such as Lipomyces, Nadsonia, Pichia, Saccharomycopsis, and Debaryomyces and, as a result, sporulating cultures assume an amber, brown, or reddish-brown color. Ascospores are generally acid-fast, a notable exception being the spores of Schizosaccharomyces. However, the spores of some species of this genus stain blue with Lugol's iodine owing to the presence of amyloid substances. Ascosporulation is generally induced under conditions which restrict vegetative growth. However, it is sometimes important that cells should be well nourished and growing vigorously on a rich medium when transferred to such conditions, though some strains sporulate without any special preparation. A variety of media have been specially formulated to induce sporulation, probably the most commonly used are: malt agar, acetate agar, Gorodkowa agar, V8 vegetable juice agar, YM agar, corn meal agar, and carrot wedges. Most of these media do not contain much carbohydrate and as a consequence they support little vegetative growth. Some genera appear to sporulate best on a particular medium: acetate agar has been recommended for Saccharomyces (Adams 1949, Powell 1952, Kleyn 1954, McClary et al. 1959), and dilute V8 agar for Metschnikowia (Pitt and Miller 1968); many strains of Pichia sporulate on malt agar. Some strains of Zygosaccharomyces rouxii are reported to sporulate best on media containing 2% sodium chloride (Wickerham and Burton 1960). Sporulation of many strains of the genus Lipomyces is favored by dilute media at low temperatures (15-20°C). Temperature can affect ascus formation markedly. Temperatures between 20 and 25°C are suitable for most yeasts. Nevertheless, strains of Debaryomyces hansenii generally sporulate best at 20°C or slightly lower, and many strains of the genus Metschnikowia require temperatures between 12 and \TC. Some yeasts sporulate rapidly, i.e., within 48 hours, especially when first isolated; others may require much longer, up to 6 weeks or more. The ability to sporulate sometimes declines when a strain is maintained in the laboratory, and may even be lost altogether. This occurs rapidly in some isolates, perhaps after 2 or 3 subcultures, whereas other strains may be kept for many years without any apparent decline in their ability to form spores. Methods. The strain to be examined is brought to active growth by cultivating it on a rich medium at a suitable temperature for 24-48 h. Special pre-sporulation

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

media have been formulated for this, such as Lindegren's medium (Lindegren 1949) and grape juice, although a general cultivation medium such as glucose-peptoneyeast extract agar serves just as well in most cases. Tubes of sporulation media are lightly inoculated from this culture and incubated at suitable temperatures as mentioned above. Preparations of material from the cultures are examined under the microscope after 2 or 3 days, 1 week, and then at weekly intervals for at least 6 weeks. Either water mounts or stained heat-fixed preparations can be used. If asci are not found after this time, the strain is either unable to sporulate or is a mating type that needs to be mated with a strain of the opposite sex. Staining procedures. A heat-fixed preparation is flooded with a solution of 0.5% malachite green and 0.05% basic fiichsin and heated to steaming for 1 min, washed thoroughly in flowing water and blotted dry. Wickerham (1951) recommendsfloodinga heat-fixed preparation with a 5%) solution of malachite green, heating to 80°C for 3 5 min, washing for 30 seconds, and counter staining with a 0.5% solution of safranine for 10 seconds. Media (1) Lindegren's pre-sporulation medium. This medium contains 10 ml of beet-leaf extract (lOOg per 100 ml of boiling water), 10 ml of beet-root extract (100 g per 100 ml of boiling water), 35 ml of canned apricot juice, 16.5 ml of grape juice, 2 g of dried baker's yeast, 2.5 ml of glycerol, 1 g of calcium carbonate, and 3 g of agar. Water is added to give afinalvolume of 100 ml. The medium is sterilized by autoclaving at 12rCfor 15 min. (2) Grape juice pre-sporulation medium. Freshly expressed juice of any variety of grape is diluted to a density of 8-10° Balling (using a flotation meter). It is sterilized in flowing steam or by autoclaving at llO^Cfor 10 min. (3) Acetate agar 1 (Fowell 1952). Dissolve 5 g of sodium acetate trihydrate in 1 liter of water and adjust the pH to between 6.5 and 7.0 before adding and dissolving 20 g of agar. Sterilize by autoclaving at 12rC for 15 min. (4) Acetate agar 2 (McClary et al. 1959). Dissolve 1 g of glucose, 1.8 g of potassium chloride, 8.2 g of sodium acetate trihydrate, 2.5 g of yeast extract, and 15g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 121°C for 15 min. (5) Corn meal agar, see p. 83. (6) Gorodkowa agar. Dissolve 1 g of glucose, 5 g of sodium chloride, 10 g of peptone, and 20 g of agar in 1 liter of tap water. Sterilize by autoclaving at 12rC for 15 min. A variant of this medium which is used in some laboratories contains 2.5 g glucose, and 10 g of meat extract is substituted for the peptone. (7) Gypsum blocks and wedges. Mix 8 parts of gypsum (calcium sulfate hemihydrate) with 3 parts of water. Cast the paste into cylindrical or wedged-shaped

(8)

(9)

(10) (11)

(12) (13)

(14)

(15)

87

cylindrical forms 3-4 cm high. After they have set, the blocks are placed in suitable sterile glass dishes with lids and heated to 110-120°C for at least 2h. Before use, either sterile water or a solution of mannitol and phosphate is added to a depth of about 1 cm. The mannitol and phosphate solution is prepared by adding 2 ml of a 5% solution of K2HPO4 to 18 ml of a 1% solution of mannitol. The gypsum may also be prepared in tubes. Gypsum and water are mixed to a creamy paste which is poured into test tubes through a fiinnel. The tubes are plugged with cotton-wool, slanted and the gypsum allowed to harden for 24-48 h at 50''C. The slants are sterilized by autoclaving at 12rC for 15 min. 5%) Malt extract agar (Wickerham 1951). Dissolve 20 g of agar in 1 liter of distilled water, then add 50 g of powdered malt extract (Difco). Sterilize by autoclaving at 115'^C for 15 min. As little heat as possible should be used when melting the sterile medium. Oatmeal agar. Boil 40 g of oatmeal in 1 liter of water for 1 h and thenfilterthrough cheesecloth. Add enough water to restore the volume to 1 liter and then add 15 g of agar. Sterilize by autoclaving at 12rC for 15 min. Potato-dextrose agar, see p. 83. Restricted growth (RG) medium (Herman 1971a). Dissolve 0.2 g of yeast extract, 0.2 g of peptone, 1.0 g of glucose, and 20 g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 12rC for 15 min. Rice agar, see p. 83 Vegetable juice agar 1: V8 agar (Wickerham et al. 1946b). Suspend 5g of compressed baker's yeast in 10 ml of water and add to 350 ml of canned V8 juice, adjust the pH to 6.8 and heat in a boiling water bath for 10 min. The pH is again adjusted until a cooled sample has a pH of 6.8. This hot medium is then mixed with a hot solution of 14 g of agar in 340 ml of water. Sterilize by autoclaving at 12rC for 15 min. The canned vegetable juice, which contains a blend of tomatoes, carrots, celery, beet, parsley, lettuce, spinach, and watercress, can be obtained at many food shops and is marketed under the name "V8 Vegetable Juice" by Campbell Soup Company, Camden, NJ, USA. Vegetable juice agar 2 (Mrak et al. 1942a). Either mince or finely grate equal weights of washed unpeeled carrots, beet roots, cucumbers, and potatoes and mix with an equal weight of water. Autoclave the mixture at 115°C for 10 min and express it through cheesecloth. The extract has a pH of approximately 5.7. Add 2% (w/w) dried baker's yeast and 2% (w/v) agar to the extract. Sterilize by autoclaving at 12rC for 15 min. Dilute V8 agar (Pitt and Miller 1968). Mix a can of V8 juice with an equal volume of demineralized

IV Methods

(16)

(17)

(18) (19)

(20)

(21)

water and adjust the pH to 5.5 with sodium hydroxide before filtering through Whatman No. 1 paper. The fikrate is then diluted 1:2, 1:9, 1:19 as required and solidified with 2% (w/v) agar. Sterilize by autoclaving at 121°C for 15min. Vegetable wedges. Wedges of either carrot, potato, beet, cucumber or turnip can be used. The vegetables are thoroughly cleaned by washing and then long cylinders about 1 cm in diameter are cut out of them with either a cork borer or apple corer. The cylinders are cut obliquely to make wedges, rinsed in cold water and put into a glass tube with a little water to prevent drying. Sterilize by autoclaving at 115°C for lOmin. Water (aqueous) agar. Dissolve 20 g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 1 2 r C for 15min. YM agar, see p. 79 YM-2% sodium chloride agar. This medium is prepared by adding 20 g of sodium chloride to 1 liter of YM agar. Yeast extract-2% glucose agar. Dissolve 5g of yeast extract, 20 g of glucose, and 20 g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 1 2 r C for 15min. Yeast infiision agar. Dissolve 15 g of agar in 1 liter of yeast infusion. Sterilize by autoclaving at 1 2 r C for 15min.

3.2.2. Characteristics of basidiospore formation: The basidiomycetous yeasts occur as either a budding haplophase, a dikaryotic hyphal phase, or a selfsporulating diplophase. Septate dikaryotic hyphae with clamp connections are characteristic of the sexual states of basidiomycetous yeasts, but they are not always formed (Fig. 30). Sexual reproduction in the basidiomycetous yeasts is either heterothallic or homothallic. The incompatibility system in the heterothallic species can be either bipolar or tetrapolar and the dikaryotic hyphae are produced by one of the conjugants after a pair of compatible cells have mated. The dikaryotic hyphae eventually form large inflated, frequently lipid-rich, clamped cells in which karyogamy occurs. These cells have been interpreted as probasidia because of this function. They are intercalary, lateral, or terminal, and are sometimes thick walled. Two kinds of homothallism are found in the homothallic or self-fertile strains, which are termed primary and secondary homothallism (Fell 1974). The hyphae are uninucleate and lack clamp connections in strains with primary homothallism, whereas they are dikaryotic and have clamps in those with secondary homothallism. The manner in which the large lipid-rich cells subsequently develop into basidial structures differs widely between taxa.

Fig. 30. Conjugated cells producing dikaryotic hypha with a clamp connection.

Fig. 31. Teleomorphs of basidiomycetous yeasts: (a) germinating teliospore with septate metabasidium bearing basidiospores, Rhodosporidium toruloides; (b) non-teliospore species with bulbous basidium bearing basidiospores, Filobasidiella neoformans.

The terminology of the basidium has not been standardized (see Donk 1973b). The thick-walled cells found in the ustilaginaceous genera Rhodosporidium and Leucosporidium have been referred to as teliospores, teleutospores, and ustospores (Fig. 31a). These spores are of various shapes, ranging from globose, through ovoidal to angular, and are sometimes pigmented as in Rhodosporidium toruloides. The teliospore forms a germ tube, called a metabasidium or promycelium, after maturing and passing through a period of dormancy. The diploid nucleus in Leucosporidium scottii migrates into the promycelium where it undergoes reduction division and the four haploid nuclei are distributed throughout the promycelium. However, in Rhodosporidium toruloides, meiosis occurs in the teliospore and the four haploid nuclei migrate into the promycelium. The promycelium then forms transverse septa which separate the haploid nuclei. Each nucleus then divides mitotically and one of these nuclei migrates into a bud that usually develops laterally on each of the promycelial cells. These haploid sessile buds are termed sporidia or basidiospores. The genetic factors controlling compatibility segregate during meiosis, with the result that the sporidia give rise to yeast phases of different mating types in heterothallic strains. In some strains of Mrakiafrigida and Cystofilobasidium spp., the promycelium does not become septate and the sporidia develop terminally (Fell and Phaff 1970). Both terminal and lateral basidia are formed on hyphae with clamp connections in Filobasidium. Thin-walled cells, slightly broader than the hyphae bearing them, elongate to form long slender non-septate metabasidia which taper apically. The tip is inflated and bears 6-8 sessile basidiospores arranged in a characteristic petallike whorl (Fig. 31b). The basidiospores give rise to yeast phases of opposite mating types. In the genus

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

Filobasidiella, the basidia generally arise in groups either terminally or laterally on septate dikaryotic hyphae. The basidia are slender non-septate elongations with swollen apices with up to 20 haploid basidiospores in acropetal chains that arise from each of 4 sites on an apex. Karyogamy and meiosis occur in the swollen apices (Kwon-Chung 1980). The sessile basidiospores give rise to yeast phases of opposite mating types. Methods. The heterothallic basidiomycetous yeasts are more often isolated as budding haploid yeast phases than as the sexual phase. Therefore, compatible strains need to be mated to obtain the dikaryotic clamp-bearing hyphal phase. A loopful of cells of each test strain is thoroughly mixed in as small an area as possible on an agar plate or slide. The cultures are incubated and examined at frequent intervals under low magnification (60-lOOx) for clamped hyphae growing into the agar around colonies where mating has occurred. Cultural conditions such as temperature may have an appreciable effect on the results of the mating tests. Media such as 5% malt extract agar, corn meal agar, hay infusion agar, and sucroseyeast extract agar are used (see Banno 1967, Fell et al. 1969, 1973, Fell and Statzell-Tallman 1980b, KwonChung 1976a, 1977b). The basidia of Filobasidium and Filobasidiella, as well as the teliospores of some ustilaginaceous species, will mature and develop further on the media on which the dikaryotic mycelium is produced. The teliospores of other ustilaginaceous yeasts fail to germinate under these conditions and special treatments have been developed for them. Usually bits of agar containing spores are soaked in demineralized water at low temperatures, sometimes for as long as 3 months, before being put on water agar. The descriptions of the individual species should be consulted for fiirther details. Media (1) Corn meal agar, see p. 83. (2) Hay infusion agar. Autoclave 50 g of decomposing hay in 1 liter of demineralized water for 30min at 121°C and then filter. Dissolve 2 g of potassium monohydrogen phosphate and 15 g of agar in the filtrate and adjust the pH to 6.2. Sterilize by autoclaving at 1 2 r C for 15min. (3) 5% Malt extract agar, see p. 87 (4) Sucrose-yeast extract agar. Dissolve 1 g of potassium dihydrogen phosphate, 0.5 g of magnesium sulfate heptahydrate, 0.1 g of calcium chloride, 0.1 g of sodium chloride, 0.5 g of yeast extract, 20 g of sucrose, 5 [ig of biotin, and 40 g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 121^C for 15min. 3.2.3. Methods of isolating mating types: When dealing with strains whose perfect state or teleomorph is not known and when testing for interfertility, it is necessary to isolate mating types from haploid and diploid heterothallic species. A strain that does not produce a

89

sexual state might be a mating type and should be tested to determine whether or not it has the ability to mate by mixing it with other non-sporulating strains of the same species. The more strains that are tested in this way the greater the chance of detecting compatible mating types. Approximately equal amounts of young actively growing cells of the test strains are mixed on the surface of sporulation media, either as agar slants or in petri dishes. The cultures are examined under the microscope for zygotes and sexual structures at intervals of about 3 days for up to 12 weeks. If sexual activity is detected, the strains are then mixed in pairs to determine which are compatible. More details can be found in the publications of Wickerham (1952, 1960, 1965a,b, 1969a), Wickerham and Burton (1952, 1954a,b, 1962), Phaff and Yoneyama (1961), and Slooff( 1964). Mating types of diploid heterothallic species are obtained by isolating single ascospores and basidiospores. This is most rapidly and reliably achieved by employing a micromanipulator when the strain produces enough sexual spores to be easily found and picked out. When the strain produces only very few ascospores, one must resort to the method of heat treatment as described by Wickerham and Burton (1954a), in which a suspension of cells from a sporulating culture are heated and samples are taken at frequent intervals and spread on agar plates. A temperature should be chosen at which vegetative cells are killed within about 5 min, after which only ascospores remain viable and the colonies arising on plates near the end of a series are derived from ascospores only. The most suitable temperature varies with the species, but generally lies in the range of 52 to 65°C. 3.3. Physiological and biochemical characteristics Physiological properties primarily serve to describe and identify yeast species and, to a very minor extent, genera. The tests most used for routine identification purposes are fermentation of and growth on carbon sources, growth on nitrogen sources, requirements for vitamins, growth at various temperatures and on media with a high content of sugar or sodium chloride, hydrolysis of urea, and resistance to antibiotics. There is not a single standardized method for many of these tests. The results of such tests are frequently dependent on the techniques employed, therefore whichever procedure is chosen, it should be scrupulously adhered to and young vigorously growing cultures should be used as inocula. 3.3.1. Utilization of carbon compounds: There appear to be no exceptions to the rule that when a yeast strain ferments a carbohydrate it is also able to grow on it. However, the reverse does not hold true: many yeasts grow aerobically on sugars they cannot ferment. It is essential that only pure, high-grade carbohydrates are used in the preparation of the media used in these tests. 3.3.1.1. Fermentation of carbohydrates: Yeasts vary in their ability to ferment sugars as measured by

90

IV Methods

the production of carbon dioxide. Yeasts of the genera Kluyveromyces, Saccharomyces, and Zygosaccharomyces, for example, ferment, at least, glucose vigorously, whereas others, such as Rhodosporidium and Sterigmatomyces, do not noticeably ferment any sugars. Species ranging from non-fermentative to strongly fermentative are found in other genera. Several tests have been devised to detect the production of carbon dioxide from carbohydrates (van der Walt 1970a). Durham tubes containing 2% solutions of sugar have been found to be the most useful for routine purposes. The basal medium in which the sugars are dissolved must contain adequate nutrients, so that conditions are suitable for the synthesis of the enzyme systems involved in the transport and hydrolysis of the carbohydrates. The basal medium must be free of contamination with fermentable sugars, such as trehalose in yeast infusion, because such contamination may lead to falsely positive results. The fermentation of D-glucose, D-galactose, sucrose, maltose, lactose, raffinose, and a-a-trehalose are generally tested for routine identification; other compounds such as inulin, starch, melibiose, cellobiose, and D-xylose are sometimes used. Methods. The ability to ferment sugars is tested in Durham tubes containing 2% (w/v) solutions of sugar (except in the case of raffinose where 4% is usually used because some strains use only part of the molecule). Durham tubes are test tubes with a small inverted tube inserted to collect any gas that may be produced. The tubes of test media are inoculated with cells from a culture which is 2 4 ^ 8 hours old, either in suspension or on the tip of an inoculating needle. The tests are incubated at 25°C for up to 28 days. The tubes are shaken and inspected at frequent intervals for accumulation of gas in the insert and, if used, a change of color in the indicator. The results are scored as follows, depending on the time taken to fill the insert with gas and the amount accumulating: +, strongly positive, insert filled within 7 days; 1, delayed positive (latent), insert rapidly filled, but only after more than 7 days; s, slowly positive, insert slowly filled after more than 7 days; w, weakly positive, the insert is not fiilly filled with gas (e.g., less than | fiill is often considered weak, whereas greater than | fiall is positive); - , negative, no accumulation of gas in the insert; V, variable, some strains are positive, others are negative Media (1) Yeast autolyzate. Mix equal parts of compressed baker's yeast and water in a flask. A thin layer of toluene may be added. Incubate at 50-55°C for three days, stirring occasionally. Boil for a few minutes and allow to cool. Adjust the pH to 6.0 by adding I N KOH. The supernatant is clarified either by adding egg white or by filtering using suction. The clear filtrate represents fiill strength yeast

autolyzate. Commercial products are available and should be prepared according to the manufacturers instructions. (2) Yeast infiision, see p. 80. (3) Fermentation basal medium. Wickerham (1951) formulated the following medium. Dissolve 4.5 g of powdered yeast extract and 7.5 g of peptone in 1 liter of demineralized water. Add bromothymol blue to give a sufficiently dark green color. Bromothymol blue stock solution is 50 mg/75 ml distilled water. Add 4 ml stock solution per 100 ml fermentation basal medium. Put 2-ml amounts of basal medium into tubes 150 x12 mm in size, which contain small (approximately 50x6 mm) inverted tubes. Sterilize at 1 2 r C for 15min. Add 1ml of concentrated, filtersterilized sugar solution aseptically to give a final sugar concentration of 2% (w/v). Alternatively, dissolve 2 g of sugar (4g in the case of raffinose) in either yeast infiision or a 1.0% (w/v) solution of powdered yeast extract or autolyzate. Dispense 5-6 ml amounts of medium into 150 X 12 mm plugged test tubes containing a small inverted tube (Durham insert) approximately 50x6 mm in size. Sterilize by autoclaving at 121°C for 15min. When cool after autoclaving, the insert should be fiill of medium, because air in the inverted tubes is displaced during autoclaving. Some laboratories use screw-capped bottles instead of plugged tubes, because they have the advantage that they can be stored longer without drying but the disadvantage of being less easy to inoculate. 3.3.1.2. Assimilation of carbon compounds: The socalled assimilation tests are in fact tests of the ability of a yeast to grow aerobically on a particular carbon compound supplied as the sole source of energy. The tests can be done either on solid media or in liquid media. However, the use of liquid media is advocated when preparing descriptions of strains and species. The method employing tubes of liquid media was described by Wickerham and Burton (1948) and Wickerham (1951). The results are improved by agitating the tubes during incubation (Barnett and Ingram 1955, Ahearn et al. 1960, Barnett et al. 1990). Some workers incubate the tests for a period of three weeks, others for four weeks. These long incubations allow the yeast to adapt to utilize some compounds. The tests on solid media can be done in two ways. The first is the auxanographic method of Beijerinck (1889a) in which the yeast is suspended in agar in pour plates and the test sugars are spotted at intervals around the circumference. The second way is to incorporate the test compound into a nutrient agar base in petri dishes and inoculate the test yeast as either a streak or a dot on the surface. This technique was used by Shifrine et al. (1954) and Beech et al. (1955) for screening many isolates on a single plate and can be used with replica-plating. The disadvantage of these agar plates is that they tend to dry within a few days and therefore do not

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

detect delayed growth on carbon sources. However, they have the advantage that the results can be read after 24 days and that any contaminating organisms can easily be seen, which makes them very suitable for the preliminary screening of many isolates. In the present volume, 36 carbon compounds are used in the description of each species, namely: - Hexoses: D-glucose, D-galactose, L-sorbose; - Disaccharides: cellobiose, lactose, maltose, melibiose, sucrose, a-a-trehalose; - Trisaccharides: melezitose, raffinose; - Polysaccharides: inulin, soluble starch; - Pentoses: D-arabinose, L-arabinose, D-ribose, L-rhamnose, D-xylose; - Alcohols: me^o-erythritol, galactitol, D-glucitol, glycerol, mj^o-inositol, D-mannitol, ribitol, ethanol, methanol; - Organic acids: citric acid, DL-lactic acid, succinic acid, D-gluconic acid; - Glycosides: a-methyl-D-glucoside, salicin; - Other compounds: D-glucosamine hydrochloride, A^-acetyl-D-glucosamine, hexadecane. Additional compounds are sometimes used when they are needed to discriminate between species of a particular genus; these include: 2-keto-D-gluconate, 5-ketoD-gluconate, saccharate, arbutin, D-glucuronate, xylitol, and L-arabinitol. 3.3.1.2.1. Assimilation tests in liquid medium. (See Wickerham and Burton 1948, Wickerham 1951, Barnett and Ingram 1955, Ahearn et al. 1960). Method. It is reiterated that only pure high-grade chemicals should be used to prepare the media, as appreciable amounts of impurities may be present in some products, for instance D-glucose in maltose, and D-galactose in L-arabinose. The tests are done in rimless test tubes (180 mm by 16 mm), either with plugs or caps. Each tube contains a standard 5 ml amount of liquid nitrogen base medium with one test substrate, except those for the negative controls, which have no carbon source added, and those for the positive controls, which contain glucose. Suspensions of cells from young actively growing cultures are used to inoculate the tubes of test media. For this purpose the yeast is cultivated on any convenient medium such as glucose-peptone-yeast extract agar for 24—48 h, or longer if it is particularly slow growing, at a temperature at which the strain grows well. Material is taken from this culture aseptically with a sterile platinum needle or loop and dispersed in about 3 ml of liquid, taking care to avoid carrying over any of the nutrient medium. Some laboratories make suspensions in sterile distilled (or demineralized) water, others use sterile yeast nitrogen base. A white card with black lines approximately 0.75 mm wide drawn on it is held behind the tube. The suspension is diluted aseptically until the lines become visible through the tube as dark bands; this is the same as a 2+ reading as in evaluating growth tests. Each of

91

the tubes containing the test media is inoculated with 0.1ml of the suspension. Some laboratories dissolve the test sugars in demineralized water instead of basal medium and dispense 4.5 ml of this solution into test tubes. In this case, 2.5 ml of the suspension of yeast in nitrogen base is pipetted aseptically into 25 ml of basal medium and each tube is then inoculated with 0.5 ml of the resulting suspension. Soluble starch and inulin are sometimes prepared at single strength and sterilized by filtration. Wickerham (1951) described a special medium to starve the inoculum. This medium is the same nitrogen base used in the tests but contains only 0.1% (w/v) of glucose. Cells from a culture grown for 24^8 hours on agar are inoculated into 10 ml of this medium in a test tube and then incubated for a fiirther 48 hours. The culture is then diluted with basal medium until the density when measured in a photometer is equal to that imparted by either 10x10^ cells per ml of Saccharomyces cerevisiae NRRL Y-567 (= ATCC 9763 = CBS 2978) or 15x10^ cells per ml of Candida utilis NRRL Y-900 (= ATCC 9950 = CBS 5609 = IFO 0988). Cells at these concentrations in test tubes with a diameter of 16 mm transmit about 55% of light passing through a blue filter (420 nm) in a Lumitron photometer. The cell suspension may be diluted using a card with black lines as described above if a photometer is not available. Each tube of test medium is inoculated with 0.1 ml of the final suspension. The tubes of inoculated test media are incubated at either 25°C or 28°C, usually for 3 weeks, though some workers extend this to 4 weeks. Strains of some species fail to grow or grow only poorly at these temperatures (see descriptions of individual species) and a suitable temperature must be used; 15°C is suitable for most psychrophilic yeasts. It is the practice in some laboratories for the tubes to be stationary, perhaps tilted to improve aeration by exposing a larger surface of liquid. However, better aeration and mixing are obtained if the tubes are agitated, giving more reliable and quicker results. This is achieved either by putting the tubes on a rotary shaker or a Rollordrum (New Brunswick Scientific Co.) or by rocking them. The angle of rocking should be as wide as possible without causing wetting of plugs or caps. T-tubes (Monod tubes) can be agitated far more energetically than test tubes (Monod et al. 1951, Barnett et al. 1990). They can be rocked to an angle of up to 90° each side of the horizontal or shaken on a reciprocating shaker. The great disadvantages of T-tubes are that they are expensive to buy and troublesome to clean, handle and store. Results are read after 1 week and after 3 weeks; in some laboratories also after 2 weeks and 4 weeks. The degree of growth is assessed by eye by placing the tubes, after they have been shaken well to thoroughly disperse the yeast, against a white card on which lines 0.75 mm thick have been drawn approximately 5 mm apart with India ink. The result is scored as 3+ if the lines are completely obscured; as 2+ if the lines appear as diffuse bands; as 1+ if the lines are distinguishable as such but have blurred edges;

92

IV Methods

as negative if the lines are distinct and sharp edged. In those cases where the outcome is doubtful, growth may be checked by inoculating 0.1 mm of the culture into a tube of fresh test medium. After reading, several tubes of culture are tested for a starch reaction as described in a later section (p. 95). The results are presented in the descriptions as follows: +, positive, either a 2+ or a 3+ reading after 1 week, or 2 weeks in some laboratories; 1, delayed positive (latent), either a 2+ or 3+ reading develops rapidly, but after 2 weeks or longer; s, slow positive, a 2+ or 3+ reading develops slowly over a period exceeding 2 weeks; w, weakly positive, a 1+ reading; - , negative; (+), seldom positive (if a particular result is seldom observed, it is sometimes given in parentheses); Various combinations may be also used, such as: V, variable: some strains are positive, others negative; +/w, positive or weak: all strains grow, but some of them grow weakly; w/-, weak or negative. Media (1) Inoculation medium of Wickerham (Wickerham 1951). Dissolve 6.7 g of Bacto Yeast Nitrogen Base and 1 g of glucose in 100 ml of demineralized water. This 10-fold concentrated solution is filter sterilized and stored in a refrigerator. The final medium is prepared by aseptically pipetting 1-ml amounts of this basal medium into 9 ml of sterile demineralized water. (2) Nitrogen base medium for carbon assimilation tests in liquid medium. The composition of Bacto Yeast Nitrogen Base is given in Table 14 (p. 99). A 10-fold concentrated solution of nitrogen base medium is prepared by dissolving 6.7 g of Bacto Yeast Nitrogen Base and the amount of the carbon compound equivalent to 5 g of glucose (with warming if necessary) in 100 ml of demineralized water. Filter sterilize and store refrigerated. Tubes of test media are prepared by aseptically pipetting 0.5 ml of the concentrate into 4.5 ml of sterile water in a 16 x 180 mm test tube. 3.3.1.2.2. Assimilation tests on agar medium. The ability to grow on various carbon sources in an agar medium may be tested either in tubes, or on agar plates by replica plating, or in auxanogram plates. Methods (1) Tube method. Each tube of a set containing the various carbon sources in a basal agar medium is inoculated with one drop of a suspension of cells from a young actively growing culture. The tubes are incubated at a suitable temperature and the results assessed by inspecting the cultures after 1, 2, and 3 weeks. The amount of growth on each of the test media is compared with that on a negative control consisting of the basal medium without any carbon source.

The tubes of test media are prepared by aseptically adding 0.5 ml of a 10-fold concentrated filtersterilized solution of the test compound to 4.5 ml of sterile molten basal medium in 16 x 180 mm test tubes. The tubes are slanted after their contents have been carefully mixed and the agar is allowed to set. (2) Replica plating. A set of plates, each containing one carbon source in basal agar medium, is inoculated by transferring cells from many young colonies simultaneously by "printing". The results are read by inspecting the plates and comparing the colonies with those of a negative control provided by a plate containing the basal medium without a carbon source. The various strains to be tested are spot inoculated with a needle onto a plate of a suitable agar medium such as glucose-peptone-yeast extract agar. The plates are incubated for 24-48 hours. The size of the petri dishes determines how many strains can be put on this master plate. The dishes are marked to orientate them and the young discrete colonies are printed to each of the plates in the test set. This is achieved by picking up the colonies on a disk of sterile filter paper, or velveteen cloth, attached to the end of a wooden or metal cylinder by pressing it first on to the master plate and then on to each of the test plates in turn. Ridgeway Watt (1979) described an automatic device for replica plating. (3) Auxanograms. Petri dishes of basal agar medium in which yeast cells are suspended are seeded with carbon sources at various points around the periphery. The results are read by inspecting the plates for an opaque zone of growth around the point where a carbon source was applied. The basal agar medium is melted and cooled to between 40 and 45°C. A suspension of young cells in water is either added to a tube of medium, mixed and then poured into a petri dish or, alternatively, pipetted into a petri dish into which the agar medium is then poured, the plate is gently swirled to mix the contents. The petri dishes are left on a level surface for the agar to set and then allowed to stand for a few hours to allow the surface of the agar to dry. Some laboratories consider this drying step unnecessary. Three to six carbon sources can be tested on each petri dish depending on its size. The bottom of the petri dish is marked around the periphery to locate and identify the carbon sources and a small amount of each compound is deposited as aseptically as possible on the surface of the agar. The plates are examined every two days for up to a week. Media. (1) Basal agar medium 1 (Lodder and Kreger-van Rij 1952). Dissolve 5g of ammonium sulfate, 1 g of potassium dihydrogen phosphate, 0.05 g of magnesium sulfate tetrahydrate, and 20 g of high-grade agar in 1 liter of demineralized water. Add either 2.0 g of

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

yeast extract or 10 ml of 100-fold concentrated stock vitamin solution. Dispense the medium into tubes or bottles and sterilize at 1 2 r C for 15min. (2) Basal agar medium 2. Dissolve 6.7 g of Bacto Yeast Nitrogen Base and 20 g of high-grade agar in 1 liter of demineralized water. Dispense into tubes or bottles and sterilize at 121°C for 15min. (3) Vitamin stock solution (van der Walt and van Kerken 1961a). Dissolve 0.2 mg of biotin, 40 mg of calcium pantothenate, 0.2 mg of folic acid, 200 mg of inositol, 40 mg of niacin, 20 mg of />-aminobenzoic acid, 40 mg of pyridoxine hydrochloride, 20 mg of riboflavin, and lOOmg of thiamine in 1 liter of demineralized water and sterilize by filtration. The sterile solution is stored frozen at -10°C or lower. 3.3.1.2.3. Splitting of arbutin. The test for splitting of arbutin is an alternative to the growth test for determining whether or not a yeast can utilize arbutin. The aglucone moiety, hydroxyquinone, gives a brown color with any soluble ferric salts in the medium when a yeast strain hydrolyses arbutin. Method. A slant of arbutin agar is inoculated with cells from a young actively growing culture and incubated at 25*^0, or other suitable temperature. If arbutin is split, the agar develops a dark brown color, usually within 2 to 7 days. Medium. Arbutin agar. Dissolve 0.5 g of arbutin, 1 g of powdered yeast extract, and 2 g of agar in 100 ml of demineralized water. Sterilize by autoclaving at 1 2 r C for 15 min. After sterilization, 2 ml of a sterile 1% solution of ferric ammonium citrate is added aseptically to and mixed with the molten agar before it is dispensed into tubes or petri dishes. The tubes are slanted and the agar is allowed to set. 3.3.1.3. Assimilation of nitrogen compounds: Yeasts are capable of utilizing a wide variety of nitrogen sources. However, the utilization of nitrate, nitrite, ethylamine hydrochloride, cadaverine dihydrochloride, L-lysine, imidazole, glucosamine, creatine, and creatinine as sole source of nitrogen are the most commonly used tests. The ability to utilize nitrate was an important criterion in defining some genera, for instance the genus Pichia was distinguished from the former genus Hansenula by its inability to grow with nitrate as the sole source of nitrogen. At present, the presence or absence of this ability is mainly used as a taxonomic criterion at the species level. The methods for testing growth are similar to those described for growth on sources of carbon, using liquid or solid media, with carbon base instead of nitrogen base. Yeasts, which grow with nitrate as the sole source of nitrogen, are also able to grow on nitrite but the reverse does not always apply. For instance, some strains of Debaryomyces hansenii utilize nitrite but not nitrate. Nitrite can be toxic to the yeast because nitrous acid is formed at pH values below 6, therefore media should be adjusted initially to pH 6.5, and nitrite used in low concentrations. Because of this toxicity, auxanograms are

93

particularly suitable for testing the utilization of nitrite and of ethylamine, which also can be inhibitory at high concentrations. The use of the auxanographic method is also preferred by van der Walt (1970a) for testing the utilization of creatine and creatinine. 3.3.1.3.1. Assimilation in liquid medium. (See Wickerham 1946, 1951.) Method. The medium used for testing the ability to utilize the various nitrogen sources is similar in composition to that used in the tests for growth on carbon compounds (Table 14, p. 99). Tubes of test media are inoculated either with 0.1 ml of a suspension of cells in water or saline as for the carbon tests, or with a light inoculum on the tip of a needle, and incubated in the same way. A certain amount of growth is apparent after the tubes have been incubated for 3 7 days, even though the nitrogen sources may not have been utilized. This is due to reserves of nitrogen carried by the cells of the inoculum. Therefore, a second tube is inoculated with a loopful (4 mm diameter) of cells from the first. If this second tube gives a 2+ to 3+ score (as for carbon tests, see p. 91) the strain is considered capable of utilizing the nitrogen source. An alternative method of testing for the utilization of nitrate in liquid medium is to use a chemical test for nitrate as described by Nickerson (1944a). Four tubes of assimilation medium are incubated and tested after about 3, 5, 10 and 15 days. One of the tubes will give a positive reaction for nitrite if the yeast utilizes nitrate. A few drops of reagent 1 and reagent 2 are added to test the culture (the composition of the reagents is given in the Media and reagents description below). The development of a distinct pink or red color indicates the presence of nitrite produced as a result of the partial utilization of nitrate. However, the absence of color may indicate that the nitrate has been completely consumed. Therefore, to test for nitrate in the medium, a small pinch of zinc powder is added to the tube in which the previously described test has just been done. Any nitrate still present is reduced to nitrite in the presence of the zinc and the characteristic pink color will develop after a few minutes. Media and reagents. (1) Carbon base. The stock medium is prepared at a 10-fold concentration by dissolving 11.7g of Bacto Yeast Carbon Base, together with the required amount of the nitrogen source, in 100 ml of demineralized water. The following amounts of nitrogen sources are used: 0.78 g of potassium nitrate, 0.26 g of sodium nitrite, 0.64 g of ethylamine hydrochloride, 0.68 g of cadaverine dihydrochloride, and 0.56 g of L-lysine (van der Walt and Yarrow 1984a). The solution is sterilized by filtration and stored in a refrigerator until required. The final medium is prepared by aseptically pipetting 0.5 ml of the concentrated medium into 4.5 ml of sterile demineralized water. Tubes for negative controls are prepared by adding filter-sterilized basal medium without nitrogen source.

94

IV Methods

(2) Reagent 1. Dissolve 8 g of sulfanilic acid in either 1 liter of 5N acetic acid (1 part glacial acetic acid to 2.5 parts of water) or 1 liter of dilute sulfuric acid (1 part concentrated acid to 20 parts of water). (3) Reagent 2. Dissolve 5 g a-naphthylamine in 1 liter of either 5N acetic acid or of dilute sulfuric acid (1:20), or dissolve 6 ml of dimethyl-a-napthylamine in 1 liter of 5 N acetic acid. 3.3.1.3.2. Auxanographic method. (See Lodder and Kreger-van Rij 1952.) Method. A procedure similar to that described for the carbon tests is used (p. 92), but the basal medium lacks a nitrogen source and contains glucose as carbon source. Three nitrogen sources are tested on each plate by spotting them around the periphery, and either ammonium sulfate or peptone is used as a positive control. Sodium nitrite and ethylamine hydrochloride should be used sparingly; overdosing of the plates is best avoided by dipping an inoculating needle into saturated solutions of the salts and then touching the surface of the seeded plate with the tip. After the nitrogen sources have been introduced, the plates are incubated at a suitable temperature and inspected after 2 and 4 days for zones of growth around the sites of the nitrogen sources. Media (1) Basal medium I (Lodder and Kreger-van Rij 1952). Dissolve 20 g of glucose, 1 g of potassium dihydrogen phosphate, 0.5 g of magnesium sulfate (heptahydrate), and 20 g of high quality agar in 1 liter of distilled water. Sterilize by autoclaving at 1 2 r C for 15min. (2) Basal medium II. Dissolve 11.7g of Bacto Yeast Nitrogen Base and 20 g of high quality agar in 1 liter of distilled water. Sterilize by autoclaving at 1 2 r C for 15min. 3.3.1.4. Growth in vitamin-free medium and vitamin requirements: The ability to grow in a glucose/mineral medium devoid of all vitamins was introduced as a diagnostic property by Wickerham (1951) and extended to include the requirements for individual vitamins by van Uden and Farinha (1958) and van Uden and do Carmo-Sousa (1959). Method. The vitamins generally employed are: myoinositol, calcium pantothenate, biotin, thiamine hydrochloride, pyridoxine hydrochloride, niacin, folic acid, and /?-aminobenzoic acid. These tests are useful for discriminating between some species, for instance, Pichia cactophila can readily be distinguished from Pichia membranifaciens by the test for growth in media without pyridoxine. The determination of requirements for vitamins is based on whether or not a yeast can grow in a complete mineral medium devoid of either all, one or a pair of vitamins. A tube of vitamin-free medium is inoculated by needle with cells from a young vigorously growing culture and the tube is incubated at a suitable temperature with agitation for 2 or 3 days. Generally the yeast grows considerably in this first tube owing to reserves being carried over within

the cell. A second tube of vitamin-free medium, and a complete set of tubes lacking individual vitamins when individual requirements are being tested, are inoculated with 1 drop of cell suspension from the first tube. The cultures are incubated and inspected after 3 and 7 days for evidence of growth. Media (1) Vitamin-free medium. The composition of this medium is given in Table 14 (p. 99). A 10-fold concentrated stock medium is prepared by dissolving 16.7 g of Bacto Vitamin-Free Yeast Base in 100 ml of distilled water, which is warmed slightly to effect complete solution of the ingredients. 3.3.1.5. Growth in media of high osmotic pressure: Yeasts from substrates with high sugar and salt contents are usually resistant to high osmotic pressures. Many yeast species grow well in glucose concentrations up to 40% by weight, whereas few species grow at sugar concentrations between 50 and 70%. The ability to grow with high concentrations of sugar is generally tested by growth on agar media containing 50%) and 60% (w/w) glucose. Method. Wickerham (1951) introduced the use of a liquid medium containing 5%o glucose and 10%) sodium chloride. Kurtzman (1990c) formulated a medium containing 16% NaCl and 5% glucose to distinguish Zygosaccharomyces rouxii from Z. mellis. Culture media in cotton-plugged tubes and petri dishes tend to dry up quite rapidly in dry climates as the result of evaporation. Such water losses can affect the results of tests and can be reduced by incubating the tubes either in plastic bags inflated with air or with self-sealing plastic caps (Kimble P.M. Cap Closures, Kimble Inc., Toledo, OH, USA), which permit gaseous exchange but prevent water loss. A strip of plastic film is sometimes used to seal petri dishes, but this can have an adverse effect on growth by preventing aeration. Media (1) 50%) Glucose agar. First dissolve 13 g of agar and then 500 g of glucose in 500 g of either yeast infiision or a 1% solution of yeast extract. Dispense into tubes and sterilize at 110°C for lOmin before slanting. Overheating leads to a noticeable browning because the sugar becomes caramelized; any media showing browning must be discarded. (2) 60% Glucose agar. First dissolve 22.5 g of agar and then 600 g of glucose in 400 g of either yeast infusion or a 1% solution of yeast extract. Dispense into tubes and sterilize at llO'^C for lOmin before slanting. Overheating leads to a noticeable browning because the sugar becomes caramelized; any media showing browning must be discarded. (3) 10%) Sodium chloride plus 5% glucose medium (Wickerham 1951). Dissolve 100 g of sodium chloride, 50 g of glucose, and 6.7 g of Bacto Yeast Nitrogen Base in 1 liter of demineralized water. Dispense 5-ml amounts into tubes and sterilize at 1 2 r C for 15min.

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

3.3.1.6. Growth at 37"C and at other temperatures: The strains of most yeast species grow best at temperatures between 20 and 28*'C. However, some yeasts, and particularly those from restricted and specific habitats, require higher or lower temperatures. Yeasts from polar regions grow poorly at 20''C but grow well between 4 T and 15T (Sinclair and Stokes 1965). In contrast, yeasts from mammals, such as Cyniclomyces guttulatus, require a temperature of BS-ST^'C to grow well, and 3035°C is reported to be the optimum for Malassezia furfur by Leeming and Notman (1987). Method. Some laboratories test for growth at various temperatures in liquid medium, whereas others test on an agar medium. When testing in liquid medium, a tube of either glucose-nitrogen base medium (as used for assimilation tests) or glucose-peptone-yeast extract broth is inoculated in the usual way and incubated at the chosen temperature. The result is recorded after 1 and 3 weeks (Wickerham 1951). When testing on agar medium, a slant of glucose-peptone-yeast extract agar is inoculated with cells of a young culture and incubated at the chosen temperature for 4 days and then inspected for growth. Media (1) 2% (w/v) Glucose-peptone-yeast extract broth, see p. 82. (2) Glucose-peptone-yeast extract agar (GPY agar), see p. 79. (3) Glucose-nitrogen base. Dissolve 5 g of glucose and 6.7 g of Bacto Yeast Nitrogen Base in 1 liter of demineralized water. Sterilize by autoclaving at 12rC for 15min. 3.3.1.7. Acid production from glucose: Yeasts produce traces of volatile and non-volatile acids in culture, however, it is only when large amounts of acetic acid are produced that acid formation has diagnostic value (Custers 1940, van der Walt 1970a). Custer's chalk medium, which contains glucose (5%) and calcium carbonate (0.5%), is used for the test and the result is determined by the calcium carbonate going into solution. Production of acid on this medium has limited use in taxonomy. It is considered characteristic of Dekkera and Brettanomyces. However, acid production is quite weak in some strains. Some yeasts which produce citric acid, such as some Candida species, also give a weakly positive reaction in this test. Because of this, a weak reaction to the production of acid has to be regarded as an equivocal result. Method. The strains to be tested are streaked onto slants or a plate of Custer's chalk medium and incubated at 25°C. The cultures are inspected at frequent intervals for up to 2 weeks for clearing of the medium around the streaks. This results from the chalk being dissolved by any acid that may have been formed. Medium (1) Custer's chalk medium. Dissolve 50 g of glucose, 5g of finely powdered calcium carbonate, 5g of yeast extract powder, and 20 g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 121°C

95

for 15 min. Cool tubes to around 45°C and agitate the medium gently to resuspend the chalk and then slant in a cool place so that the agar gels quickly before the chalk can settle. 3.3.1.8. Formation of extracellular amyloid compounds (starch formation): Aschner et al. (1945) and Mager and Aschner (1947) studied the production of extracellular starch-like material by encapsulated yeasts. They found that under suitable conditions several yeasts formed extracellular polysaccharides, which give a blue to greenish-blue color with iodine solution. One of the conditions required was that the pH of the medium be maintained below 5.0. However, some species, such as those of Leucosporidium, give a positive result to the starch test at pH values above 5.0. Methods (1) Testing in liquid culture at pH 5.6 (Wickerham 1951, 1952). Cultures for the carbon growth tests which contained sugars or polyhydric alcohols are tested for the presence of amyloid compounds. Some cultures are tested after incubation for 7 days and, if these give a negative result, others are tested after the next reading. Some laboratories prefer to use a medium containing 1% glucose. The test is done by adding one or two drops of dilute Lugol's iodine and mixing it with the culture by shaking the tube. A positive result is indicated by the development in the culture of a color varying from dark blue to green. The strain may be re-tested by cultivating it in yeast nitrogen base medium with 3% glucose if the result is doubtful. The relatively large amount of glycogen synthesized by some yeasts interferes with the test, especially if iodine solutions stronger than 0.02 N are used. The brown color typical of glycogen may mask a weak starch reaction. The tubes should be allowed to stand at room temperature for several hours when this occurs, after which time the brown color of the glycogen reaction will have disappeared and the blue color of the starch reaction remains. (2) Testing on solid media. One or more strains are inoculated onto agar medium in petri dishes. The cultures are incubated for 1-2 weeks, then flooded with dilute Lugol's iodine, and inspected for formation of a blue to green color. Media (1) Medium I (Lodder and Kreger-van Rij 1952), ammonium sulfate-glucose agar. Dissolve 2 g of ammonium sulfate, 2 g of potassium dihydrogen phosphate, 1 g of magnesium sulfate heptahydrate, and 20 g of glucose in 1 liter of demineralized water. Adjust the pH to 4.5. Dissolve 40 g of agar in 1 liter of demineralized water. The two portions of the media are autoclaved at 12 r C for 15 min. They are put together aseptically and 20 ml of either a 20% solution of yeast extract or a 100-fold concentrated vitamin solution are added. The two solutions are mixed gently while the agar is still molten and dispensed aseptically into petri dishes.

96

IV Methods

(2) Medium 11. Dissolve 10 g of glucose, 6.7 g of Bacto pullulans. Several methods have been proposed for detectYeast Nitrogen Base, and 15g of agar in 1 liter of ing lipolytic activity, although this property is employed demineralized water. Sterilize by autoclaving at 121°C mainly as a confirmatory test. These methods use substrates such as tributyrin, olive oil, tallow, Tween 40, 60, for 15min. (3) Lugol's iodine solution (Gram's modification). Dis- and 80, as well as partial glyceryl esters of higher solve 1 g of iodine and 2 g of potassium iodide in fatty acids (Bulder 1955, Sierra 1957, Tuynenburg-Muys and Willemse 1965). Tuynenburg-Muys and Willemse 300 ml of demineralized water. 3.3.1.9. Hydrolysis of urea: Seeliger (1956) tested the compared the various methods and concluded that for hydrolysis of urea by some ascogenous and anascogenous routine purposes none was better than that developed by species on Christensen's urea agar. Hydrolysis is generally Eijkman (1901). They did, however, recommend the use absent in ascogenous species, whereas it is marked in of partial glycerol esters of higher fatty acids, which have the basidiomycetous genera such as Cryptococcus and a higher melting point than beef tallow. Method. Melt and filter fresh beef suet, then sterilize Rhodotorula (Abadie 1967, Hagler and Ahearn 1981). The the tallow by autoclaving it at 121'^C for 15min. Pipette ascogenous yeasts Schizosaccharomyces pombe, Yarrowia approximately 0.5 ml of molten fat into a slightly warmed lipolytica and Lipomyces species are exceptions. Booth sterile petri dish and then tilt it from side to side so that the and Vishniac (1987) established the presence of urease fat spreads evenly over the bottom. Remove any surplus and, probably, its role as the major enzyme concerned fat with a pipette. Put the dish in a refrigerator for an hour in the utilization of urea by yeasts. Urease catalyses the hydrolysis of urea, giving ammonia and carbamate or two to allow the fat to harden. Melt 18-20 ml of either which, itself, hydrolyses to form carbonic acid and another YM agar (p. 79) or Gorodkowa agar (p. 87) and let it cool molecule of ammonia (Andrews et al. 1984). The overall to about 40'^C, pour over the fat and allow to set. The plates are inoculated by streaking the test strains across reaction leads to an increase in pH. The test can be done the plate, cutting slightly into the agar medium with the on solid medium (Seeliger 1956) or in liquid medium needle, and incubated at 25°C. The plates are inspected (Bamett et al. 1990). daily for the formation of an opaque zone, formed by 3.3.1.9.1. Testing on solid medium. Method. Cells calcium salts of the liberated fatty acids, which is usually from a young culture are inoculated onto a slant of apparent along the streak within a week. Christensen's urea agar (Christensen 1946) and a control 3.3.1.11. Cycloheximide resistance: Whiffen (1948) tube of the basal medium without urea and incubated was the first to report that yeasts varied in their sensitivity at 25°C. The cultures are inspected daily for up to 4 days to the antibiotic cycloheximide (Acti-dione). Her results, and the result is recorded as positive when a deep pink based on the study of 22 species, indicated that yeasts color develops in the tube of test medium but not the could be divided into 3 categories: control. (1) markedly sensitive, inhibited by 1 [ig/ml, e.g., SaccharoMedium. Christensen's urea agar. Dissolve 1 g of pepmyces cereuisiae; tone, 5 g of sodium chloride, 2 g of dihydrogen phosphate, (2) moderately sensitive, inhibited by 25fxg/ml, e.g., and 12 ^g of phenol red in 1 liter of demineralized water Schizosaccharomyces pombe; and adjust the pH to 6.8. Add and dissolve 20 g of agar and (3) tolerant, not inhibited by concentrations as high as dispense 4.5-ml amounts into 16 mm diameter plugged 1000|ig/ml, e.g., Kluyveromyces lactis. glass tubes. Autoclave at 121°C for 15min, then add Method. The test is done in liquid Bacto Yeast Nitrogen 0.5 ml of a filter-sterilized 20% solution of urea. After Base with D-glucose, as for the assimilation tests, with mixing, slant the tubes and allow the agar to set. This cycloheximide added to give a final concentration of medium is available in powdered form commercially. either 0.1% or 0.01% (w/v). The results are read and 3.3.1.9.2. Testing in liquid medium. Method. Difco scored in the same way as for the carbon assimilation Bacto Urea R Broth is dissolved in sterile demineralized tests (p. 91). water and amounts of 0.5 ml are dispensed into tubes 3.3.1.12. Tolerance of 1% of acetic acid: Sand aseptically. These tubes can be stored in a freezer for (1973) and Pitt (1974) showed that yeasts could be up to 6 months. A loopful of cells from a one- or two- distinguished on the basis of their resistance to benzoic day-old culture is suspended in the broth and incubated and acetic acids. A test was described by Yarrow (1984d) at 37°C (irrespective of whether the yeast can grow at this for growth on a medium containing 1% acetic acid to temperature). The tubes are examined every half hour for a discriminate Zygosaccharomyces rouxii from Z bailii, and change of color to red, which indicates hydrolysis of urea. Z bisporus. Many yeasts which give a positive result produce the color Method. A 4-mm loopfiil of the same cell suspension change within half an hour, most do so within two hours as used to inoculate the assimilation tests is either spotted and all within four hours. onto or streaked across an agar plate (several strains can be 3.3.1.10. Splitting of fat: Lipase activity has been tested in one petri dish). The plates are incubated at 25'^C reported in several species, including Yarrowia lipolytica, and examined after 3 and 6 days for the development of Candida rugosa, Zygoascus hellenicus, and Trichosporoncolonies.

11. Methods for the isolation, maintenance and identification of yeasts / D. Yarrow

Medium. Acetic-acid (1%) agar. Dissolve 10 g of glucose, 1 g of tryptone, 1 g of powdered yeast extract, and 2 g of agar in 100 ml of demineralized water and autoclave at 121°C for 15 min. Cool the sterilized medium to between 45°C and 50°C, add 1 ml of glacial acetic acid, mix rapidly and pour into petri dishes. 3.3.1.13. Gelatin liquefaction: The ability to liquefy gelatin is of limited diagnostic value because few yeasts are strongly proteolytic. This property is used as a confirmatory test for species that liquefy gelatin rapidly and completely, within about a week. Method. Stelling-Dekker (1931), Lodder (1934), and Lodder and Kreger-van Rij (1952) used a medium containing malt extract and 20% gelatin, whereas Wickerham (1951) preferred to use a synthetic medium containing 10% gelatin. The use of the synthetic medium is preferred for reasons of standardization. When the test is done in tubes, each tube is inoculated with the same amount of inoculum as each tube of assimilation medium. When done on plates, the surface of the medium is inoculated with a needle or a multi-point inoculator. The cultures are examined regularly for up to 3 weeks for signs of liquefaction. Medium. Dissolve lOOg of gelatin, 5g of glucose, and 6.7 g of Bacto Yeast Nitrogen Base in 1 liter of demineralized water, dispense into either tubes or bottles (from which the medium can be poured into petri dishes when required). Sterilize by autoclaving at 12PC for 15 min. The medium in tubes is allowed to gel with the tubes in a vertical position. 3.3.1.14. Diazonium Blue B color reaction: Van der Walt and Hopsu-Havu (1976) studied 70 yeast strains representing 26 ascogenous and 4 basidiomycetous genera and reported that all the strains of basidiomycetous yeasts, as well as those anamorphs which had cell walls with a fine structure typical of basidiomycetes, gave a darkred color reaction when a buffered solution of Diazonium Blue B (DBB) was applied to the cultures. Ascogenous yeasts did not give this reaction. The mechanism of the reaction has not yet been elucidated. Nevertheless, this test is employed to determine whether an asexual yeast belongs to a basidiomycetous or an ascomycetous genus. The synonymy in the chemical nomenclature of the reagent and related compounds has been discussed by Barnett et al. (1990). 3.3.1.14.1. Reaction on solid media. Method. The strains being tested are cultivated on YM agar. Van der Walt and Hopsu-Havu (1976) incubated the cultures for 3 weeks, however, Hagler and Ahearn (1981) reduced this period to 5-7 days followed by 16 h at 55-60*^0. Hagler and Mendonga-Hagler (1991) reduced the time needed for this test even further by incubating the cultures on carbon base-urea agar at 25°C for 3 days followed by incubation overnight at 55°C. The plates are allowed to cool to room temperature after incubation before the cultures are tested. One or two drops of freshly prepared chilled DBB reagent are applied to the surface of each colony, taking care to

97

ensure good contact between the reagent and the yeast. The result is recorded as positive if a dark-red to violetred color develops within 1-2 min at room temperature. Media and reagent. (1) YM agar, see p. 79. (2) Carbon base-urea agar. Dissolve 11.7 g of Bacto Yeast Carbon Base, 0.2 g of acid fiichsin, and 20 g of agar in 900 ml of demineralized water. Sterilize by autoclaving at 1 2 r C for 15 min. Add 100 ml of a filter-sterilized 20% solution of urea to the molten medium, mix and dispense into either tubes or petri dishes. (3) DBB reagent. The DBB reagent is prepared by dissolving 15 mg of Diazonium Blue B salt (Brentamine Blue B, ICI pic; Fast Blue Salt B, Farbwerke Hoechst AG) in 15 ml of chilled 0.25 M tris(hydroxymethyl)aminomethane (Tris) buffer, pH 7.0. The salt is unstable under warm and damp conditions, but 15-mg portions of the dye can be stored in sealed tubes at 4''C. The freshly prepared reagent is kept in an ice bath and used before it turns dark yellow (within about 30 min). 3.3.1.14.2. Reaction in liquid medium. Method. The strains to be tested are cultivated in 5 ml of nitrogen base with 0.5% glucose (pH 7.0) for 3 days with agitation at a suitable temperature. Slow-growing strains may have to be cultivated for longer to obtain sufficient material for the test. The cells are collected in a centrifuge and the supernatant is poured off. The cells are then suspended in 0.5 ml of 0.05 N KOH and the tube is placed in boiling water for 10 min. The suspension is cooled to ambient temperature and mixed well with 2.5 ml of 95% ethanol. The cells are sedimented by centrifiaging briefly and the supernatant is poured away. The cells are suspended in 0.3 ml of DBB reagent. The test is scored positive if a violet color develops within a few seconds. The color is retained by the cells for several hours if 0.1ml of 95% ethanol is added immediately after the color has formed. Some workers scale this test down and use one fifth of the amounts of medium and reagents given above. 3.3.1.15. Canavanine-Glycine-Bromothymol blue (CGB) agar for identifying the varieties of Filobasidiella neoformans (Cryptococcus neoformans): Filobasidiella neoformans variety neoformans can be distinguished from the variety bacillispora within 2 5 days by incubating cultures on CGB agar at 25''C. Isolates of the variety bacillispora hydrolyze glycine and are resistant to L-canavanine. The pH of the medium rises and the color of the bromothymol blue indicator turns to blue when the glycine is hydrolyzed. Most isolates of the variety neoformans do not hydrolyze glycine, and the few which do are sensitive to the canavanine so the medium remains greenish-yellow in color (Kwon-Chung et al. 1982b, Min and Kwon-Chung 1986). Method. A loop fill of cells from a young culture is streaked onto CGB agar in either a tube or a petri dish and incubated at 25°C for up to 5 days. The color of the

98

IV Methods

medium does not change if the strain is Filobasidiella neoformans var. neoformans, but turns blue if the strain is the variety bacillispora. Medium. Canavanine-glycine-bromothymol blue (CGB) agar. The complete medium is prepared by cooling 900 ml of bromothymol agar (c, below) to about 55°C and adding 100 ml of stock solution A (a, below). (a) Stock solution A. Dissolve 300 mg of L-canavanine sulfate, 100 g of glycine, 10 g of potassium dihydrogen phosphate, 10 g of magnesium sulfate heptahydrate, and either 10 drops of Bejectal with vitamin C (Abbott Laboratories, Chicago, IL, USA) or lOmg of thiamine hydrochloride in 1 liter of demineralized water, adjust the pH to 5.6 and filter sterilize. (b) Bromothymol blue solution. Dissolve 0.4 g of sodium bromothymol blue in 100 ml of demineralized water and filter sterilize. (c) Bromothymol blue agar. Dissolve 20 g of agar in 880 ml of demineralized water and add 20 ml of bromothymol blue solution. Sterilize by autoclaving at

i2rc.

3.3.1.16. Melanin synthesis on DOPA medium: The formation of melanin-like pigments from various ortho- and />ara-diphenols is used for rapid presumptive identification of Filobasidiella neoformans. A variety of substrates may be used: extracts of the seeds of Guizotia abyssinica (Niger seed), catechol, chlorogenic acid, protocatechuic acid, norepinephrine, dopamine, hydroxymetanilamine, dihydroxymetanilamide, and dihydroxyphenylalanine (DOPA) (Staib 1962, Chaskes and Tyndall 1975, 1978, Nurudeen and Ahearn 1979). Method. Cells from a young culture are streaked onto DOPA agar in either a tube or a petri dish and incubated at a temperature of 20-3 0°C for up to 72 h. Colonies of Filobasidiella neoformans are black on this medium. Medium (1) DOPA solution. Dissolve 0.04 g of dihydroxyphenylalanine (DOPA), 1 g of asparagine, 1 g of L-glutamine, and 1 g of glycine in 200 ml of demineralized water. Adjust the pH to 5.5 with 1 M potassium hydrogen phosphate (about 2.5 ml is needed) and filter sterilize the solution. (2) Basal medium. Dissolve 4 g of potassium dihydrogen phosphate, 2.5 g of magnesium sulfate heptahydrate, lOmg of thiamine hydrochloride, 20|ig of biotin, 0.5 g of glucose, and 25 g of agar in 800 ml of demineralized water. Adjust the pH to 5.5 with approximately 7 ml of 1 M potassium hydrogen phosphate and sterilize by autoclaving at 1 2 r C for 15 min. Cool the agar medium to 55°C and mix with the DOPA solution before pouring into petri dishes or test tubes. The complete medium should be stored at 4''C and used within one week of preparation. 3.3.1.17. Tetrazolium indicator medium (TTC medium): Media containing tetrazolium salts are used in some medical laboratories as an aid in isolating and presumptively identifying some species (Pagano et al.

1957, Mendel et al. 1960, Yamane and Saitoh 1985). Candida tropicalis produces dark red to maroon colonies owing to the reduction of the tetrazolium salt, whereas yeasts which are incapable of reducing the tetrazolium salt, such as Candida albicans, produce pale pink to whitish colonies. Method. Cells are either streaked or spotted onto the agar. The plate is incubated for 24-48 h and then inspected for colored colonies. Medium (1) TTC stock solution. Dissolve 1 g of 2,3,5-triphenyltetrazolium chloride in 10 ml of demineralized water. Sterilize by filtration and store at 4°C in a dark glass bottle. (2) Basal medium. Dissolve 10 g of mycological peptone, 10 g of glucose, and 15 g of agar in 1 liter of demineralized water. Sterilize by autoclaving at 121°C for 15 min. Melt the agar just before use and cool to 45-50"C, then add 0.1 ml of the stock TTC solution, to give a final concentration of 100 |ig per ml, and pour into petri dishes. The final pH of the medium is 7.0. 3.3.1.18. Staining nuclei: Although several methods have been recommended for staining the nuclei of yeast cells, none surpass the Feulgen-Giemsa technique of Ganesan and Swaminathan (1958) as modified by Robinow (1961). This method, if followed careftiUy, gives good preparations and has been applied for chromosomal counts. The method involves the hydrolysis of albuminmounted cells in 1N HCl at 60°C, followed by washing in a buffer and the application of the Giemsa stain. It should be kept in mind that not only is the time allowed for hydrolysis critical but also that it varies for different yeasts. It is therefore necessary to determine the best time to allow for hydrolysis. The publications of Robinow (1961) and McCully and Robinow (1972a,b) should be consulted for further details. 4. List of observations and tests included in the standard descriptions Acetic acid (1%) tolerance test Acid production from glucose Assimilation of carbon compounds Assimilation of nitrogen compounds Canavanine-glycine-bromothymol blue test Cycloheximide resistance test Diazonium Blue B color reaction Fat splitting Fermentation Filaments: Slide cultures, Dalmau plate cultures . . Formation of ascospores Formation of asexual endospores Formation of ballistospores Formation of chlamydospores Formation of germ tubes Gelatin liquefaction Growth on 50% and 60% glucose medium

96 95 90 93 97 96 97 96 89 82 84 83 84 83 84 97 94

11. Methods for the isolation, maintenance and identification of yeasts ID. Yarrow

99

Table 14 Composition of chemically defined media ^ Formula ingredients per liter

Nitrogen sources Ammonium sulfate Asparagine Carbon source Glucose (dextrose) Amino acids L-Histidine monohydrochloride DL-Methionine DL-Tryptophan Vitamins Biotin Calcium pantothenate Folic acid Inositol Niacin />-Aminobenzoic acid Pyridoxine hydrochloride Riboflavin Thiamine hydrochloride Compounds supplying trace elements Boric acid Copper sulfate Potassium iodide Ferric chloride Manganese sulfate Sodium molybdate Zinc sulfate Salts Potassium phosphate, monobasic Potassium phosphate, dibasic Magnesium sulfate Sodium chloride Calcium chloride Agar Amount of final medium from 100 g of dehydrated medium (liters) Amount of dehydrated medium per liter of finished medium

Yeast morphology agar

Yeast nitrogen base for carbon assimilation tests

3.5 g

Yeast carbon base for nitrogen assimilation tests

Vitamin-fi^ee yeast base for vitamin requirement test

1.5g

5g none

none none

5g none

lOg

none

lOg

lOg

lOmg 20 mg 20 mg

10 mg 20 mg 20 mg

Img 2mg 2mg

10 mg 20 mg 20 mg

20^xg 2000 [ig 2!ig 10000 ^ig 400 |ig 200 |ig 400 ^ig 200 [xg 400 |ig

20 [Xg 2000 jig 2^xg 10000 [ig 400 ^ig 200 [ig 400 txg 200 jxg 400 [ig

20^lg 2000 [ig 2^ig lOOOOjig 400 |ig 200 [ig 400 fxg 200 jxg 400 [ig

none none none none none none none none none

500 ng 40^lg 100 ^ig 200 ^ig 400 ^xg 200 ^ig 400 (ig

500 ^ig 40 fig lOOjig 200 ^^g 400 ^ig 200 ^tg 400 jig

500 ^ig 40|ig 100 ^ig 200 |ig 400 [ig 200 |ig 400 |ig

500 jxg 40 ^xg 100 ^ig 200 [ig 400 ^ig 200 jig 400 ^ig

0.85 g 0.15g 0.5 g

0.85 g 0.15g 0.5 g

0.85 g 0.15g 0.5 g

0.85 g 0.15g 0.5 g

0.1 g 0.1 g

0.1 g 0.1 g

0.1 g 0.1 g

0.1 g 0.1 g

18g 2.8

none 14.9

none 8.5

none 5.9

35.0g

6.7 g

11.7g

16.7g

^ These media are marketed by the Difco Laboratories of Detroit, Michigan, USA, in dehydrated form; they are based on the formulae published by Wickerham (1951). They have been fortified with greater amounts of biotin, inositol and calcium pantothenate. The pH has been raised from 5.2 to 5.6 by the phosphates listed in the table.

Growth in liquid media Growth on solid media Growth in vitamin-free medium; vitamins required for growth Growth at 37°C; maximum temperature for growth Melanin synthesis on DOPA medium Sodium chloride (10%) + glucose (5%) growth test Splitting of arbutin Staining nuclei Starch formation

81 81

Tetrazolium indicator medium Urea hydrolysis

98 96

94 95 98 94 93 98 95

5. List of media, reagents and stains 5.1. Media See Table 14 for the composition of chemically defined media. Acetic acid (1%) agar 97 Acetate agar (2 versions) 87

100

Agar medium for carbon assimilation tests Agar medium for nitrogen assimilation tests Ammonium sulfate-glucose agar (starch test) . . . . Arbutin agar Canavanine-glycine-bromothymol blue (CGB) agar Carbon base Carbon base-urea agar (for DBB test) Christensen's urea agar Corn meal agar Custer's chalk medium Cycloheximide resistance medium Cynidomyces medium D-20 medium Diphenyl solution DOPA solution Fat splitting Fermentation medium Gelatin medium Glucose-nitrogen base Glucose-peptone-yeast extract agar (GPY agar) . . 2% Glucose-peptone-yeast extract broth 2% Glucose-peptone-yeast extract agar 50% Glucose agar 60% Glucose agar Gorodkowa agar Grape juice pre-sporulation medium Gypsum blocks and wedges Hay infusion agar Inoculation medium of Wickerham Leeming and Notman agar Lindegren's pre-sporulation medium Liquid medium for carbon assimilation tests Liquid medium for nitrogen assimilation tests . . . . Malt (extract) agar 5%) Malt (extract) agar (sporulation)

IV Methods

92 94 95 93 97 93 97 96 83 95 96 82 78 80 98 96 90 97 95 79 82 82 94 94 87 87 87 89 92 79 87 92 93 79 87

Malt extract Malt (extract) agar-2% calcium carbonate Morphology agar Niger seed agars Nitrogen base Oatmeal agar Potato-dextrose agar Restricted growth (RG) medium Rice agar Sabouraud's 4% glucose agar 10%) Sodium chloride-5%) glucose medium Sucrose-yeast extract agar Tetrazolium indicator medium V8 agar V8 (diluted) agar Vegetable juice agar Vegetable wedges Vitamin-free medium Vitamin stock solution Water (aqueous) agar Yeast autolyzate Yeast extract-2%) glucose agar Yeast infusion agar Yeast infusion YM agar (yeast extract-malt extract agar) YM-2% sodium chloride agar YM broth (yeast extract-malt extract broth)

79 82 82 79 92 87 83 87 83 79 94 89 98 87 87 87 88 94 93 88 90 88 88 80 79 88 79

5.2. Reagents Diazonium Blue B (DBB) reagent Lugol's iodine solution Nitrite test reagents

97 96 94

5.3. Stains Ascospore stains

87

Chapter 12

Identification of coenzyme Q (ubiquinone) homologs Y. Yamada 30min in a 95''C water bath (or a mantle heater). After cooling with tap water for 25min, the coenzyme Q is extracted by vigorous shaking with 100 ml of hexane, followed by centrifugation for 2min at 3000 rpm. This procedure is repeated two times. The pooled hexane extracts are shaken three times with 30 ml of water in a separatory funnel for removal of the NaOH. After evaporation to dryness under reduced pressure, the residue is treated with 30 ml of acetone. The yellow-colored acetone solution is concentrated to a small volume (1 ml)

Contents 1. Introduction 2. Methods

101 101

1. Introduction The yeasts and yeastlike fungi have coenzyme Q or ubiquinone as a respiratory component. The coenzyme Q homologs of these organisms are recognized to be Q-5 through Q-10 (Yamada and Kondo 1973, Yamada et al. 1976b, 1981). The chemical structure of the isoprenoid quinone is designated as 2,3-dimethoxy-5methyl-6-multipreny^-l,4-benzoquinone (Fig. 32). A dihydrogenated isoprenoid side-chain coenzyme Q homolog, Q-10(H2) was found in basidiomycetous yeasts (Yamada et al. 1973c, Nakase and Suzuki 1986d). Of the four procedures described below, the usage of high performance liquid chromatography gives a qualitative as well as quantitative analysis in the identification of isoprenoid quinones. The coenzyme Q homologs are useful for classifying yeasts and yeastlike fungi at the generic level (Yamada and Kondo 1972b, Yamada et al. 1976a).

CH3O

CH^

CH3O

CH, I (CH2CH = C-CH2)„H

2.2. Purification of coenzyme Q The purification of coenzyme Q is carried out by preparative thin-layer chromatography (0.5 mm silica gel 6OF254 layers on 20x20 cm glass plates, E. Merck) using benzene for development. A yellow band (Rf 0.30.5), corresponding to the yellow spot of a reference standard (Q-6 and/or Q-10), also visualized as a dark band under a short-wave UV light (wave length, 254 nm), is scraped off. The yellow silica gel powder is transferred to a filter paper in a funnel, and the yellow substance is extracted with a small volume of acetone (2 ml). The yellow solution is concentrated to a very small volume (150 111) in vacuo. The isoprenoid quinones can be crystallized in ethanol at -20°C. 2.3. Identification of coenzyme Q homologs

2.3.1. Reversed-phase paper chromatography: A filter paper strip (12x40 cm, Whatman No. 1 or Toyo Fig. 32. Diagrammatic representation of coenzyme Q. The coenzyme Q No. 50) is impregnated with 3.0% silicon oil (w/w, KFhomologs are expressed as Q-n, with n denoting a specified number of 54, Shin'etsu Chem. Co.) in chloroform (Yamada and isoprene units in a side chain, e.g., Q-6, Q-10. If there are 2 hydrogen atoms saturating the isoprene units in the side chain the formula becomes Kondo 1973, Yamada et al. 1989c). Three samples can Q-«(H2), e.g., Q-10(H2). be spotted inside on the paper strip using the known reference standards (Q-6 through Q-10) on both sides. The 2. Methods paper strip is developed with ethanol/ethyl acetate/water (5:3:1, v/v/v). Likewise, another filter paper strip is 2.1. Growth conditions and extraction of impregnated with 2.5% white vaseline (w/w, U.S. Pharm.) coenzyme Q The yeasts and yeastlike fiingi are aerobically grown in in toluene. In the latter case, the solvent system is a glucose/peptone/yeast extract medium (2/0.4/0.3%, w/v, A^, A/^-dimethylformamide/water (97:3, v/v). After devel500 ml) on a rotary shaker for 24-72 h (Yamada and oping and drying the paper strips, the coenzyme Q Kondo 1973, Yamada et al. 1989c). The cells harvested by homologs are located as yellowish-brown spots on the centrifugation are suspended in 150 ml of water/methanol chromatograms by oxidation with 0.3% KMn04 (w/v) in (1:2, v/v), containing 20 g NaOH and 5 g pyrogallol. The water. The remaining KMn04 is eluted from the paper hydrolysis of the yeast cells is performed by heating for strips with tap water. 101

102

IV Methods

2.3.2. Reversed-phase thin-layer chromatography: The samples are spotted on a reversed-phase thinlayer plate (HPTLC RP-I8F254S, lOxlOcm, 0.2mm, E. Merck), which is then developed with acetone/ acetonitrile (4:1, v/v) (Collins and Jones 1981). The spots of the coenzyme Q homologs are visualized under a shortwave UV light (wave length, 254 nm) or by spraying 50% H2SO4 (v/v), followed by heating the plate in an oven at 120-150^Cfor2-5min. 2.3.3. High performance liquid chromatography: The separation of the coenzyme Q homologs is performed on a Novapak C18 column (3.9x 150mm, Waters). Other usable columns are: Zorbax ODS (4.6x150 mm, Du Pont); Cosmosil 5Ci8 (4.6 x 150 mm, Nacalai); |i Bondapak Cig (3.9x300mm. Waters). The mobile phase is methanol/isopropanol (7:3 and/or 1:1, v/v), and the flow rate is l.Oml/min (or 1.5-2.0ml/min) (Collins and Jones 1981, Tamaoka et al. 1983, Billon-Grand 1985, Nakase and Suzuki 1985a). Detection is done at 275 nm. The

sample peaks are compared with those of known reference standards (Q-6 through Q-10). 2.3.4. Mass spectroscopy: The samples are vaporized at the ion source with a direct inlet system operating at 140-170°C (Yamada et al. 1969, Yamada and Kondo 1973). Mass spectra of the coenzyme Q homologs show intense fragment ion peaks at m/z 197 and 235. Besides these characteristic ion peaks, several small fragment ion peaks are found at M-15 and M-69, M-69-68, M-69-68-68 and so on, which indicate the expulsion of a methyl group and the successive loss of isoprene units in the side chain, respectively. The molecular ions (M^) are: at m/z 522 (Q-5), 590 (Q-6), 658 (Q-7), 726 (Q-8), 794 (Q-9) and 862 (Q-10). The dihydrogenated isoprenoid side-chain ubiquinone 10, Q-10(H2) has the molecular ion peak at m/z 864. These molecular ion peaks are ofl;en observed at M^ + 2, which indicates the presence of reduced coenzyme Q.

Chapter 13

Analysis of carbohydrate composition of cell walls and extracellular carbohydrates H. Roeijmans, H. Prillinger, C. Umile, J. Sugiyama, T. Nakase and T. Boekhout found in different orders of Ascomycetes (Saccharomycetales, Schizosaccharomycetales, Saitoella, and different 1. Introduction 103 orders of filamentous Ascomycetes) indicating that the 2. Methods 104 phylogenetic value of galactose is rather low (Prillinger et al. 1994). Four cell wall types occur within the 1. Introduction basidiomycetous yeasts: Cell wall composition is a useful marker to indicate (1) Microbotryum-typQ with mannose dominant, glucose present, fucose usually present, and rhamnose sometaxonomic and phylogenetic affiliations among fungi times present; (Bartnicki-Garcia 1968, 1970, Weijman and Golubev 1987, Dorfler 1990, Prillinger et al. 1990a,b, 1991a,b, (2) Ustilago-typQ with glucose dominant, and mannose and galactose present; 1993). Bartnicki-Garcia (1970) divided the fungi into eight groups using combinations of the two most dominant (3) Dacrymyces-typQ with xylose present, and glucose and mannose present in equal amounts, traces of cell wall carbohydrates present. Weijman and Golubev galactose may be present, but extracellular amyloid (1987) distinguished six categories of yeasts and yeastlike compounds are usually absent; fungi using qualitative and semi-quantitative analyses of (4) Tremella-tyTpQ with glucose predominant, xylose, cell walls. The following groups were recognized: mannose, and galactose present, and extracellular (1) Saccharomycetes (Endomycetes) pro parte (e.g., Sacamyloid compounds are often present. charomycetaceae), characterized by high mannan, low The latter four types agree with the cell wall typology chitin content, and absence of galactose; (2) the remaining Saccharomycetes (Endomycetes) (e.g., of the Basidiomycetes given by Dorfler (1990). From Dipodascaceae, Nadsoniaceae) have high mannan these data it is apparent that cell wall biochemistry is an content, intermediate chitin content, and contain important tool in the taxonomy and phylogeny of yeasts and yeastlike organisms. galactose; Four main methods have been applied to analyze the (3) the "red yeasts" (Sporobolomycetaceae, Sporidiobolaceae): variable mannan content, intermediate chitin carbohydrate composition of the yeast cell wall: (1) Gas chromatographic analysis of acid hydrolyzates content, and contain fucose or rhamnose; of whole cells with derivatization using capillary (4) the smuts (Ustilaginales): low mannan content, but columns (Weijman 1976, Weijman and Golubev 1987) high chitin content; or packed columns (Sugiyama et al. 1985); (5) the remaining basidiomycetes (i.e., Filobasidiaceae and Cryptococcaceae): low mannan content, but with (2) gas chromatographic analysis of acid hydrolyzates of purified cell walls with derivatization (Dorfler 1990, chitin and xylose present; and Prillinger et al. 1990a,b, 1991a,b, 1993); (6) the Euascomycetes: low mannan content, but contain (3) high performance liquid chromatographic (HPLC) chitin and rhamnose. analysis of acid hydrolyzates of whole cells without Prillinger et al. (1993) differentiated seven cell wall derivatization (Suzuki and Nakase 1988a); and types among the yeasts and yeastlike fungi using both quantitative and qualitative analyses. Their typology is a (4) high performance anion-exchange chromatography with pulsed amperometric detection (HPAE-PAD) refinement of that of Weijman and Golubev (1987). Three of cell wall neutral sugars without derivatization cell wall types occur within the ascomycetous yeasts: (1) Saccharomyces-typQ with mannose and glucose present; (Prillinger et al. 1993). (2) Schizosaccharomyces-typQ with galactose, glucose Weijman's method is summarized as follows: cells are hydrolyzed with IN HCl for 12 h at lOOT. During and mannose present; (3) Protomyces-typQ with glucose predominant, rham- hydrolysis monomers are formed. Neutral polysaccharides nose and mannose present, and galactose commonly are hydrolyzed completely at low concentrations of HCl (IN), whereas chitin is converted to glucosamine present. The presence of glucose, mannose and galactose is at high concentrations of HCl (5N). After hydrolysis. Contents

103

104

IV Methods

the solubilized components are trimethylsilylated (TMS) prior to gas-liquid chromatography. Sugiyama's method differs in that dried cells are hydrolyzed in 2.5 N trifluoroacetic acid (TFA) at lOO^C for 15h, followed by reduction of the neutral sugars to their corresponding alditols by borohydride and acetylation of the alditol derivatives by acetic acid anhydride. The final residues are trifluoroacetylated, followed by gas chromatographic analysis. In Prillinger's method cell walls are isolated and purified before further processing. In order to accurately detect xylose, Suzuki and Nakase (1988a) developed a method using HPLC analysis of whole-cell hydrolyzates without derivatization. In brief, whole cells are hydrolyzed with TFA and directly analyzed using HPLC. 2. Methods 2.1. Analysis of whole-cell hydrolyzates using trimethyl-silylation (Weijman 1976, Weijman and Golubev 1987) Yeast cells are grown in 100 ml yeast extract-peptoneglucose (YPG) broth in 300 ml Erlenmeyer flasks on a rotary shaker at 150rpm and 24°C (psychrophilic species at ITC). After 5-7 days, the cells are harvested by centrifiigation (9000g), washed with 0.9% NaCl and washed again with deionized water. The pellet is freezedried and powdered. Fifteen mg dried cells are hydrolyzed in 6ml IN HCl or 5N HCl under nitrogen in glass tubes with a screwcap for 12h at 100°C in a sandbath. To detect xylose, the cells are hydrolyzed with 2N trifluoroacetic acid for 3h at 100°C. After cooling, the hydrolyzates are filtered through Whatman No. 1 filter paper and 1 ml of the filtrate is dried in a rotary evaporator. An additional 100 |il Tri-Sil (Pierce) is used to silylate the sample. The reaction mixture is vigorously shaken and allowed to stand for 15 min. One \i\ is injected into the gas chromatographmass spectrometer (GC-MS), which is equipped with a wall coated open tubular (WCOT) capillary column of 25 meters, coated with CP Sil 5CB with a film thickness of 0.13 (im and an inside diameter of 0.32 mm. The column is programmed from 125 to 175°C with a rate of 10°Cmin~^ and an isothermal period of 5 min. Helium is used as the carrier gas at a flow rate of 30mlmin~^ Electron Impact (EI) at 70 eV is used for ionization and a quadrupole serves as a massfilter.

remaining acid is removed by drying over a rotary evaporator. Fifty mg of sodium borohydride in 10 ml distilled water is added to the residue. The reaction mixture is allowed to stand overnight to reduce the sugars to alditols. Excess sodium borohydride is removed by adding drop wise 5% hydrochloric acid in methanol and by evaporating to dryness. Insoluble material and low-polar materials are removed by membrane filtration (0.45 fxm, Gelman Sciences, Inc., Ann Arbor, MI, USA), followed by reversed-phase chromatography (Sep-Pak C, Waters Associates, Milford, MA, USA). After drying, 2 ml of methanol are added. The solution is dried in a rotary evaporator to remove the borate complex. This step is repeated several times. To lOmg of the residue, 0.1ml of trifluoroacetic anhydride and 0.1ml of A/^-methylbistrifluoroacetamide are added. The reaction mixture is kept in a sealed tube and left overnight. One to 2.5 |il of the sample is injected in a gas chromatograph equipped with a hydrogen flame ionization detector. The U-shaped glass column (4mx3mm i.d.) is packed with Chromosorb W (HP) 80-100 mesh coated with 2% silicone OV-105, 800 mesh. Nitrogen is used as the carrier gas at a flow rate of 35mlmin~^ The column temperature is 140°C, and the injector temperature is 150°C. Carbohydrates are identified on the basis of sample coincidence with the relative retention times for the trifluoroacetyl derivatives of the neutral monosaccharide standards.

2.3. Analysis of whole cell hydrolyzates without derivatization using HPLC (Suzuki and Nakase 1988a) Yeast cells are grown in a 500-ml Erlenmeyer flask containing 200 ml YM broth supplemented with 2% glucose on a rotary shaker at 150rpm and 25°C (17°C for psychrophilic species). After 4-5 days the cells are harvested by centrifiigation (5000 rpm) and washed twice with deionized water. Fifty to lOOmg of acetone dried cells are suspended in 2 ml 2 M trifluoroacetic acid (TFA) in a test tube (13 x 100 mm) with a teflon-sealed screw cap, and kept at 100°C for 3h in a metal block bath. After cooling, the hydrolyzate is filtered through paper and evaporated to dryness. The residue is dissolved in 0.5 ml water, neutralized with small amounts of Amberlite IRA 410 (OH form), filtered with a disposable filter unit (e.g., Shodex DT ED-13), and then subjected to HPLC. HPLC was performed using two different column systems, 2.2. Analysis of whole-cell hydrolyzates using namely: trifluoroacetic acid (TFA) and reduction of sugars to their alditol derivatives (Sugiyama (1) with water (HPLC grade) as the mobile phase at a flow rate of O.Smlmin-^ at 80°C; and et al. 1985) Yeast cells are grown in liquid Wickerham's basal nitrogen (2) with acetonitrile-water (80:20, v/v, HPLC grade) as the mobile phase at a flow rate of O.Smlmin"^ at medium supplemented with 15 ml 1% glucose at 25°C 75°C. for 3-5 days on a test tube shaker. Cells are harvested A refractive index detector is used to detect the by centrifugation, and washed with deionized water. The pellet is freeze-dried and powdered. About 30 mg of the carbohydrates. Neutral sugars and sugar alcohols are dry cell powder is hydrolyzed in 5 ml 2.5 N trifluoroacetic identified by comparing their retention times with those acid (TFA) at 100°C for 15 h in a sealed tube. The of standard neutral sugars and sugar alcohols.

13. Analysis of carbohydrate composition of cell walls and extracellular carbohydrates / H. Roeijmans et al.

2.4. Isolation and purification of cell walls (Prillinger et al. 1993) Yeast cells are grown in 5 x 100 ml YPG broth on a rotary shaker at 150rpm for 3-5 days, harvested by centrifugation (3000 rpm), washed with deionized water until the supernatant is clear, and frozen at -20°C until further use. For disruption, cells are suspended in distilled water (1:1, v/v), and disrupted in a French Press (20000PSI) until no intact yeast cells are present under the light microscope. Recently, Messner et al. (1994) have shown that disintegration of yeast cells by a Vibrogen Cell Mill (Tubingen, Germany) and 0.5 mm glass beads (yeast pellet/distilled water/glass beads =1/1/3, w/w) is superior to the disruption with a French Press. Disrupted cells are washed with ice-cold distilled water until the supernatant is clear. To remove cytoplasmic remnants, the cell walls are thoroughly washed twice with 1% Nadesoxycholate (pH 7.8) with intensive stirring. After each Na-desoxycholate purification the cell walls are rinsed three times with distilled water. In the case of capsuled yeasts, all the capsular material, which may form a second slimy layer above the cell wall pellet, should be removed. Yeast cells without capsules (i.e., those not having a positive starch test with Lugol's solution) are lyophilized and powdered with a pestle and mortar and fiirther processed. 2.5. High performance anion-exchange chromatography with pulsed amperometric detection (HPAE-PAD) of cell wall neutral sugars without derivatization (Prillinger et al. 1993) Acid hydrolysis of purified cell walls and removal of TFA

105

are performed according to the method of Sugiyama et al. (1985) (see above). Usually a mixture of 2 mg of powdered cell wall suspended in 2 ml 2 N TFA is hydrolyzed for 2 h at 120°C using teflon-sealed Pyrex test tubes. A standard mixture of monosaccharides containing 90p,g of each neutral sugar is treated in the same way. After blowing off the TFA, samples and standards are resolved in 10 ml distilled water. Monosaccharides are separated on a Dionex CarboPac PA-1 column (4.6x250 mm), equipped with a guard column, using a flow rate of 1 ml min~^ at room temperature. Elute with NaOH as follows: lOmM NaOH for 3.9 min isocratic, followed by a step gradient to 100% deionized water for 30 min, and reequilibration to the initial conditions for 10 min. The system used for monosaccharide analysis consisted of a Dionex (Sunnyvale, CA) Gradient Pump Module GPM 2 and a Pulsed Amperometric Detector PAD 2. A Dionex Eluant Degas Module is used to sparge and pressurize the eluants with helium. Eluant 1 is lOOmM NaOH (preparation of a 50% NaOH stock solution with ultrapure distilled water), and eluant 2 is 18 MOhm deionized water. Sample injection is via a Dionex High Pressure Injection Valve equipped with a 10 |il sample loop. To ensure a carbonate free eluant, an anion trap column ATC-1 was installed before the injection valve. Detection of the separated monosaccharides is by a PAD, equipped with a gold working electrode. The following pulse potentials are used: £'i=0.1V (^i= 300 ms); E2 = 0.6V (^2 = 120 ms); jE'3 =-0.6 V (^3 = 60 ms). The response time of the PAD 2 is set to 1 s. Resulting data are integrated and plotted using Dionex Al-450 software.

This Page Intentionally Left Blank

Chapter 14

Determination of ethanol production Ann Vaughan-Martini and Alessandro Martini Contents 1. Introduction 2. Method 3. Media

107 107 107

causes the CO2 produced by fermentation to pass through concentrated sulfuric acid (Fig. 33). This acts as a water trap to eliminate weight loss as water vapor.

2. Method Cells from a 24 h preculture grown with agitation 1. Introduction (150 rpm) at 25°C are centrifuged, washed twice and reSeveral yeast species are capable of forming ethanol by suspended in sterile, deionized water. 200-ml Erlenmeyer fermentation of monosaccharides and oligosaccharides. flasks with 100 ml of synthetic medium are inoculated to The quantitative expression of this property is, however, a final concentration of 5x10^ cells per ml and closed quite variable among fermenting yeasts, ranging from less with the Miiller valve previously filled with sulfuric acid. than 1-2% (w/v) to 14% and higher in some strains of the A zero time weight value is taken before incubating in sensu stricto group of the genus Saccharomyces (p. 358). static culture at 25°C. Flasks are weighed daily until values Tolerance to concentrations of ethyl alcohol higher are stationary. Relative ethanol production (as volume than 12-13% (w/v) is a technological character highly percent) is calculated by multiplying the weight loss (as appreciated in the case of yeasts utilized as fermentation grams of CO2) by 1.25. starters in the wine industry. Screening surveys for this property (fermenting power) have been done on a large 3. Media number of strains isolated from grapes, fermenting grape musts and wines (Kunkee and Goswell 1977) by using a Although grape must adjusted to 24% glucose consimple method that allows a rough evaluation of ethanol centration has been used by some authors (Capriotti yields from the gravimetric estimation of the CO2 formed 1954, Rosini et al. 1982b), more reliable results are in a liquid fermentation medium containing an excess of obtained with the following synthetic medium (Ciani and Rosini 1987): 13.7 g/1 Bacto Yeast Nitrogen Base (Difco, glucose (24%) w/v). The test is carried out at 25''C in Erlenmeyer flasks Detroit, MI, USA); glucose 24% (w/v), pH adjusted plugged with a special glass device (Miiller valve) that to 3.0. Sterilization is preferably done by Tyndalization which involves the exposure of the medium to steam on three consecutive days. The medium is steamed for 30min on the first day, incubated at room temperature overnight, steamed for a fiirther 30min on the second day, reincubated and steamed again for 30min on the third day. The first day's exposure kills non-spore-forming Valve filled with 96% H2SO4 - ^ organisms, i.e., vegetative forms; subsequent incubation, provided the medium is favorable, allows germination of Flask containing grape must bacterial endospores, which are killed during the second Fig. 33. Miiller valve assembly for determining ethanol production from or third steaming. fermentation.

107

This Page Intentionally Left Blank

Part Va

Classification of the ascomycetous taxa

This Page Intentionally Left Blank

Chapter 15

Discussion of teleomorphic and anamorphic ascomycetous yeasts and a key to genera C.P. Kurtzman Contents 1. Introduction 2. Diagnostic descriptions of presently accepted ascomycetous genera 3. Key to the genera of ascomycetous yeasts

rRNA/rDNA sequence comparisons as well as in many of the chapters on individual genera. These studies (Barns et al. 1991, Berbee and Taylor 1993, Hausner et al. 1992, Hendriks et al. 1992, Kurtzman 1993a,c, 1994, Kurtzman and Robnett 1994a; Nishida and Sugiyama 1993, Walker 1985a) have demonstrated the following: (1) budding yeasts and yeastlike taxa such as Ascoidea and Cephaloascus are members of the same clade and this clade is a sister group to the euascomycetes, some of which are dimorphic and have a yeast phase; (2) with few exceptions (e.g., Eremascus), euascomycetes form asci within or upon a fruiting body, whereas members of the yeast clade do not; (3) Schizosaccharomyces, Taphrina, Protomyces, Saitoella and Pneumocystis form a divergent group of taxa basal to the other ascomycetes; (4) ascospore shape, presence or absence of hyphae and pseudohyphae, presence or absence of budding, and most assimilation reactions are not predictive of phylogenetic relationships. The classification system used for ascomycetous taxa in this edition of The Yeasts, A Taxonomic Study, is given in Table 15. The class "Archiascomycetes" was proposed by Nishida and Sugiyama (1993) for those basal taxa now represented by Schizosaccharomyces, Taphrina, Protomyces, Saitoella and Pneumocystis. Although genetic distances within this clade are uncertain, it has been divided into four orders. The Taphrinales and the Protomycetales appear closely related and may prove synonymous. Eriksson (1994) recently described the order Pneumocystidales for placement of the genus Pneumocystis. Prillinger et al. (1990a), noting the many differences that previously had been observed between Saccharomyces and Schizosaccharomyces, introduced the order Schizosaccharomycetales. However, Prillinger et al. (1990a) indicated a possible basidiomycetous affinity for this new order. Because of this questionable link to the basidiomycetes and the earlier uncertainty concerning the relationship of Schizosaccharomyces with Dipodascus and Geotrichum, the order Schizosaccharomycetales was emended by Kurtzman (1993a) to reflect its ascomycetous nature and phylogenetic scope. Eriksson et al. (1993) examined the molecular and organismal differences between Saccharomyces and Schizosaccharomyces and also proposed the order Schizosaccharomycetales. Because Prillinger et al. (1990a) first made the proposal for ordinal rank, Schizosaccharomycetales Prillinger et al.

Ill 113 119

1. Introduction Historically, ascomycetes have been placed in two taxonomic classes, or as subclasses in some treatments, the Hemiascomycetes and the Euascomycetes. Hemiascomycetes are characterized by asci that are not enclosed within a fruiting body (ascocarp), whereas Euascomycetes usually form asci within or upon fruiting bodies. Budding yeasts, fission yeasts and yeastlike genera such as Ascoidea, Cephaloascus, and Taphrina are assigned to the Hemiascomycetes, but taxonomic treatments of yeasts typically exclude the yeastlike taxa. Earlier proposals for classification of the ascomycetous yeasts have been summarized by Lodder (1970) and Kreger-van Rij (1984a). Those systems were mostly based on type of vegetative cell division, ploidy and morphology of ascospores. Another aspect of classification is whether the ascomycetous yeasts represent primitive organisms, as is suggested by their appearance, or whether they are reduced forms derived from various more advanced fungal lineages. Cain (1972) proposed that yeasts represent reduced forms, citing the hat-shaped (galeate) ascospores common to Pichia (Hansenula), Cephaloascus, and Ceratocystis as evidence of an adaptation that would have occurred just once in evolutionary history. Redhead and Malloch (1977) accepted this proposal and fiirther argued for the derived status of various yeastlike ascomycetes, which they assigned to existing families of mycelial fungi. Von Arx and van der Walt (1987) also agreed with the concept that ascospore shape is of phylogenetic significance and suggested additional relationships between yeasts and euascomycete families. In the last few years, the system of classification for yeasts, as well as for other fungi, has been revolutionized by the introduction of phylogenetic analysis of molecular sequences. A majority of the studies have focused on rRNA gene sequences, but comparisons of other molecules have given similar results (Kurtzman 1994). Details of these studies are discussed in the chapter on Ill

112

Va. Classification of the ascomycetous taxa Table 15 Classification of the ascomycetous yeasts ^

Class Order Family^ Genus

Phylum: Ascomycota "Archiascomycetes" Schizosaccharomycetales Prillinger, Dorfler, Laaser, Eckerlein & Lehle ex Kurtzman Schizosaccharomycetaceae Beijerinck ex Klocker Schizosacchawmyces Taphrinales Gaumann & C.W. Dodge Taphrinaceae Gaumann Taphrina Lalaria (Anamorph of Taphrina) Protomycetales Luttrell ex D. Hawksworth & O.E. Eriksson Protomycetaceae Gray Protomyces ? Saitoella (Anamorphic genus) Pneumocystidales O.E. Eriksson Pneumocystidaceae O.E. Eriksson Pneumocystis Euascomycetes ? Endomyces^'^ (E. scopularum) Oosporidium Hemiascomycetes Saccharomycetales Kudryavtsev (synonym Endomycetales Gaumann) Ascoideaceae J. Schroter Ascoidea Cephaloascaceae L.R. Batra Cephaloascus Dipodascaceae Engler & E. Gilg Dipodascus Galactomyces ? Sporopachydermia ? Stephanoascus ? Wickerhamiella ? Yarrowia ? Zygoascus Endomycetaceae J. Schroter ? Endomyces^'^ (E. decipiens) ? Helicogonium ^ ? Myriogonium ^ ? Phialoascus^ ? Trichomonascus^ Eremotheciaceae Kurtzman Eremothecium ? Coccidiascus Lipomycetaceae E.K. Novak & Zsolt Bahjevia Dipodascopsis Lipomyces Zygozyma

Family^ Genus Metschnikowiaceae T. Kamienski Clauispora Metschnikowia Saccharomycetaceae G. Winter Arxiozyma ? Citeromyces ? Cyniclomyces ? Debaryomyces ? Dekkera ? Issatchenkia Kluyveromyces ? Lodderomyces ? Pachysolen ? Pichia Saccharomyces ? Saturnispora Torulaspora ? Williopsis Zygosaccharomyces Saccharomycodaceae Kudryavtsev ? Hanseniaspora ? Nadsonia Saccharomycodes ? Wickerhamia Saccharomycopsidaceae von Arx & van der Walt ? Ambrosiozyma Saccharomycopsis Candidaceae Windisch ex van der Walt (Anamorphic) Aciculocon idium Arxula Blastobotrys Botryozyma Brettanomyces Candida Geotrichum Kloeckera Myxozyma Sch izoblastosporion Sympodiomyces Trigonopsis

^ Authority names for genera are given in the individual chapters. ^ A question mark preceding the genus name indicates that family assignment is uncertain. ^ Placement in the class Hemiascomycetes is uncertain. ^ The genus Endomyces and the family Endomycetaceae are uncertain, see discussion, this chapter.

15. Discussion of teleomorphic and anamorphic ascomycetous yeasts and a key to genera / C.P. Kurtzman

ex Kurtzman is accepted over Schizosaccharomycetales O.E. Eriksson et al. With the preceding changes, the class Hemiascomycetes has become phylogenetically circumscribed to include just the budding yeasts and such yeastlike genera as Ascoidea and Cephaloascus. Previously, all of these taxa were placed in the order Endomycetales. However, the identity of the Endomycetales has been in doubt because typification of Endomyces, the type genus, is based only on the drawings of Brefeld (von Arx 1972), rather than on a preserved specimen of collected type material. In an effort to preserve nomenclatural stability. Redhead and Malloch (1977) designated as neotype a specimen found on Agaricus melleus that appeared to match the description of Endomyces decipiens, the type species. Kurtzman and Robnett (1995) determined the 5' end large subunit rDNA sequences from living cultures that had been identified as Endomyces decipiens and Endomyces scopularum. The strain identified as E. decipiens proved to be a member of the Dipodascus albidus clade, whereas E. scopularum was shown to be a euascomycete. Sequence analysis of the dried neotype of E. decipiens, although technically possible, will not resolve the taxonomic issue because of the uncertainty of which species is depicted in Brefeld's drawing. Because it is unknown whether E. decipiens is a member of the yeast clade or a euascomycete, or whether either of the living cultures that were sequenced were correctly identified, the order accepted for the budding and related yeasts is the Saccharomycetales as typified by the genus Saccharomyces. Family assignments for members of the Saccharomycetales are generally uncertain because there are insufficient molecular data available to resolve most intergeneric relationships. Present assignments have been made using a combination of molecular and morphological similarities, but these assignments will change as more molecular data become available. To denote the uncertainty, many of the genera listed in Table 15 are preceded by a question mark. It should also be emphasized that at present there are insufficient molecular phylogenetic analyses to adequately circumscribe many of the genera. Consequently, most genus descriptions should be considered only as diagnostic groupings to aid in species identification. For example, the phylogenetically divergent genus Pichia is accepted with present species assignments only because proposals for its division into phylogenetically defined groups (genera) appear inadequate. Once additional information is available, some of the recently proposed genera, which are presently treated as synonyms, may be adopted. In another example, rDNA sequence comparisons suggest Blastobotrys, Arxula and Sympodiomyces to be congeneric and to represent the anamorphic states of Stephanoascus (Kurtzman and Robnett 1995). It should also be noted that rDNA-sequence comparisons have shown the genus Oosporidium to be a dimorphic euascomycete (Kurtzman

113

and Robnett 1995). A history of each genus is given in individual chapters. 2. Diagnostic descriptions of presently accepted ascomycetous genera 2.1. Teleomorphic genera 2.1.1. Ambrosiozyma: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae with blastoconidia. True hypha have plugged septal pores that are usually visible under the light microscope as small dots. Sexual reproduction: Asci are generally attached to hyphae, often in clusters, and they usually become deliquescent at maturity. Asci form 1-4 hat-shaped ascospores. Physiology: Sugars are fermented, often slowly or weakly. Nitrate is assimilated by some species. Pellicles are not formed on liquid media. Extracellular starchlike compounds are not produced. Inositol is not assimilated. Urease production and gelatin liquefaction are not determined. 2.1.2. Arxiozynta: Vegetative reproduction: Multilateral budding; pseudohyphae may form but true hyphae are absent. Sexual reproduction: Asci are unconjugated, persistent, and form 1-2 roughened, spheroidal ascospores. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin liquefaction is variable. 2.1.3. Ascoidea: Vegetative reproduction: Budding cells and pseudohyphae are occasionally present; true hyphae are abundant and often form blastoconidia which may be sessile or borne on denticles. Sexual reproduction: Asci are formed laterally or terminally on true hyphae and are ellipsoidal or acicular. Characteristically for this genus, new asci form percurrently inside older asci. Ascospores are hat-shaped or ellipsoidal, 16-160 per ascus, and are released through a terminal opening in the ascus. Physiology: Sugars are not fermented. Nitrate may be assimilated. Pellicle formation on liquid media is not determined. Extracellular starch-like compounds are not produced. Inositol may be assimilated. Urease may be weakly produced. Gelatin liquefaction is not determined. The DBB reaction is ordinarily negative, but occasionally weak for A. africana. 2,1 A, Babjevia: Vegetative reproduction: Multilateral budding; pseudohyphae are rudimentary; true hyphae are infrequently formed. Sexual reproduction: Buds develop into asci while remaining attached to the parent cell. Several asci are usually

114

Va. Classification of the ascomycetous taxa

attached to a single parent cell, and the asci produce 4-30 hyaline, globose to ellipsoidal ascospores. Physiology: Sugars are not fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are sometimes produced. Inositol is not assimilated. Urease production and gelatin liquefaction are not determined. Cultures are not mucoid as is common for Lipomyces. 2.1.5. Cephaloascus: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae, often with blastoconidia which may be borne on distinct denticles. Sexual reproduction: Erect ascophores are formed which may be smooth or roughened and hyaline or with a brownish pigment. Clusters of asci form at the apex of each ascophore to give a brush-like appearance. The asci, which become deliquescent, generally form 4 hatshaped ascospores. Physiology: Sugars may be fermented. Nitrate is not assimilated. Pellicles are formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.6. Citeromyces: Vegetative reproduction: Multilateral budding; neither pseudohyphae nor true hyphae are formed. Sexual reproduction: Asci are persistent and contain 1 or, infrequently, 2 roughened, spheroidal ascospores. Physiology: Sugars are fermented. Nitrate is assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.7. Clavispora: Vegetative reproduction: Multilateral budding; pseudohyphae may be formed, but true hyphae are not. Sexual reproduction: Asci form following pairing of complementary mating types. The asci, which become deliquescent, produce 1 ^ clavate ascospores. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.8. Coccidiascus: Vegetative reproduction: Cells are spheroidal to ovoidal; pseudohyphae and true hyphae are not formed. Sexual reproduction: Asci are thick-walled and contain 2 elongated ascospores that are closely intertwined to form a helix. Physiology: Unknown. The taxon is known only from the tissue of Drosophila. 2.1.9. Cyniclomyces: Vegetative reproduction: Cells are long-ovoidal to cylindrical with budding at the poles or on broad shoulders

at the poles. Poorly differentiated pseudohyphae are present, but true hyphae are not formed. Sexual reproduction: Asci are persistent and form 1-4 ovoidal to cylindrical ascospores. Physiology: Sugars are weakly fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. Growth occurs only between 30^0°C. Amino acids, B-vitamins, and an increased level of atmospheric CO2 are required for growth. 2.1.10. Debaryomyces: Vegetative reproduction: Multilateral budding; pseudohyphae may be formed but true hyphae are absent. Sexual reproduction: Conjugation between a cell and its bud usually precedes ascus formation, but conjugation between independent cells may occur. Asci produce 14 ascospores that may be spheroidal or ellipsoidal and smooth or roughened, spheroidal and roughened with a prominent equatorial ring, or smooth and lenticular. Asci are persistent or deliquescent. Physiology: Sugars are fermented by some species. Nitrate is not assimilated. Pellicles may be formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production and gelatin liquefaction are not determined. 2.1.11. Dekkera (Anamorph Brettanomyces): Vegetative reproduction: Multilateral budding; cells are spheroidal to ellipsoidal, and some have an ogival shape. Pseudohyphae may form, but true hyphae are not produced. Single cells may profusely elongate and branch to give the appearance of a non-septate mycelium. Sexual reproduction: Asci, which are unconjugated and become deliquescent, produce 1 ^ ascospores that are hat-shaped or somewhat spheroidal with tangential brims. Physiology: Sugars are fermented, and fermentation is usually stimulated by oxygen. Nitrate is assimilated by some strains. Pellicles may be formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease is not produced. Gelatin liquefaction is not determined. Acetic acid is often produced. Growth is slow and generally shortlived. 2.1.12. Dipodascopsis: Vegetative reproduction: Budding cells may be present. Pseudohyphae are absent, but true hyphae are abundant. Sexual reproduction: Asci are acicular or cylindrical and form laterally on hyphae after fusion of gametangia. Ascospores are hyaline, ellipsoidal to reniform, and 3 2 128 are formed in each ascus. The spores are released following dissolution of the ascus apex. Physiology: Sugars are not fermented. Nitrate is not

15. Discussion of teleomorphic and anamorphic ascomycetous yeasts and a key to genera / C.P. Kurtzman

115

assimilated. Pellicle formation on liquid media is not not produced. Inositol is not assimilated. Urease prodetermined. Extracellular starch-like compounds are duction and gelatin liquefaction are not determined. produced. Inositol is assimilated. Urease production and 2.1.18. Hanseniaspora (Anamorph Kloeckera): gelatin liquefaction are not determined. Vegetative reproduction: Bipolar budding; pseudohyphae 2.1.13. Dipodascus (Anamorph Geotrichum): may form but true hyphae are absent. Vegetative reproduction: Arthroconidia and true hyphae Sexual reproduction: Asci are unconjugated and form 1are formed. 4 ascospores that may be hat-shaped, or spheroidal and Sexual reproduction: Asci are acicular, cylindrical, ellipsmooth, or rough and with or without an equatorial soidal or subglobose and form after fusion of hyphal ledge. Asci may be persistent or deliquescent. gametangia. Ascospores are hyaline and ellipsoidal; 4- Physiology: Sugars are fermented. Nitrate is not as128 are formed in each ascus. The spores are released similated. Pellicles are not formed on liquid media. following dissolution of the ascus apex. Extracellular starch-like compounds are not produced. Physiology: Fermentation of sugars is weak or absent. Inositol is not assimilated. Urease is not produced. Nitrate is not assimilated. Pellicle formation on liquid Gelatin liquefaction is not determined. media is not determined. Extracellular starch-like com2.1.19. Issatchenkia: pounds are not produced. Inositol is not assimilated. Vegetative reproduction: Multilateral budding; pseudoUrease production and gelatin liquefaction are not hyphae are present, but true hyphae are not formed. determined. Sexual reproduction: Asci are unconjugated unless di2.1.14. Endomyces: rectly arising from the pairing of complementary matVegetative reproduction: Pseudohyphae and true hyphae ing types. Asci are persistent and form 1 ^ spheroidal are present and may produce blastoconidia. ascospores that may appear roughened under the light Sexual reproduction: Asci are subglobose to clavate and microscope. may arise following conjugation of hyphal gamatangia. Physiology: Glucose is fermented. Nitrate is not assimAsci form 4-6 hat-shaped ascospores and deliquesce at ilated. Pellicles form early on liquid growth media. maturity. Extracellular starch-like compounds are not formed. Physiology: Unknown. All known species appear to be Inositol is not assimilated. Urease production is not obligate parasites of mushrooms (Agaricales). determined. Gelatin may be liquified. 2.1.15. Endomycete-like genera: See individual de- 2.1.20. Kluyveromyces: scriptions in chapter 31. Vegetative reproduction: Multilateral budding; pseudohyphae may be present, but true hyphae are not 2.1.16. Eremothecium: Vegetative reproduction: Multilateral budding and pseudo- produced. Sexual reproduction: Asci may or may not be conjugated hyphae are absent or present. True hyphae are formed. and produce 1 ^ , or exceptionally, much greater than Sexual reproduction: Asci are unconjugated, fusiform to 4 ascospores that are smooth, reniform, bacilliform, cylindrical, become deliquescent, and produce 8-32 ellipsoidal or spheroidal. Ascospores are liberated at acicular to fusiform ascospores. Ascospores may have maturity. a central septum, and those of some species have a Physiology: Sugars are fermented. Nitrate is not assimitapered, terminal extension of the cell wall. lated. Pellicles may form on liquid media. Extracellular Physiology: Sugars are fermented by some species. Nitrate starch-like compounds are not produced. Inositol is is not assimilated. Pellicles may be formed on liquid not assimilated. Urease production is not determined. media. Extracellular starch-like compounds are not Gelatin is not liquified. produced. Inositol is not assimilated. Urease production is not determined. Gelatin is liquified by some species. 2.1.21. Lipomyces: Visible amounts of riboflavin are produced by some Vegetative reproduction: Multilateral budding; pseudospecies. hyphae are absent or rudimentary; true hyphae are absent. 2.1.17. Galactomyces (Anamorph Geotrichum): Vegetative reproduction: Arthroconidia and true hyphae Sexual reproduction: Buds, and occasionally the parent cells, develop into asci which produce 4-20 smooth are produced. or roughened ellipsoidal ascospores that are amber or Sexual reproduction: Asci are subspheroidal and arise folbrown in color. Asci generally deliquesce. lowing conjugation of hyphal gametangia. Asci produce 1 ascospore that is broadly ellipsoidal, sometimes with Physiology: Sugars are not fermented. Nitrate is not a faintly roughened surface, and a pale golden-brown assimilated. Pellicles may be formed on liquid media. color. Asci deliquesce at maturity. Extracellular starch-like compounds are produced. Inositol may be assimilated. Urease production and gelatin Physiology: Sugars may be weakly fermented. Nitrate is liquifaction are not determined. Cultures are often quite not assimilated. Pellicle formation on liquid media is mucoid. not determined. Extracellular starch-like compounds are

116

Va. Classification of the ascomycetous taxa

2.1.22. Lodderomyces: Vegetative reproduction: Multilateral budding; pseudohyphae are present but true hyphae are not produced. Sexual reproduction: Asci are unconjugated, persistent and produce 1-2 long ellipsoidal ascospores. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.23. Metschnikowia: Vegetative reproduction: Multilateral budding; pseudohyphae are usually present but true hyphae are not produced. Sexual reproduction: Asci are unconjugated, persistent, and elongate with one end usually enlarged. Asci produce 1-2 needle-shaped ascospores that have no terminal appendages. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are formed infrequently on liquid media. Extracellular starch-like compounds are not formed. Inositol is not assimilated. Urease is not produced. Gelatin is not liquified. 2.1.24. Nadsonia: Vegetative reproduction: Bipolar budding; pseudohyphae and true hyphae are not formed. Sexual reproduction: Asci develop following conjugation between a cell and its bud. Either the bud, an opposing bud, or the cell becomes the ascus, which is persistent and forms 1-2 spheroidal ascospores that may be visibly roughened. Physiology: Sugars may or may not be fermented. Nitrate is not assimilated. Pellicles are formed on liquid media. Extracellular starch-like compounds are not formed. Inositol is not assimilated. Urease is not produced. Gelatin is not liquified. 2.1.25. Pachysolen: Vegetative reproduction: Multilateral budding; pseudohyphae may be poorly developed or absent; true hyphae are not produced. Sexual reproduction: An ascus develops on the end of a refractile tube which arises from a vegetative cell that may or may not be conjugated. Asci produce 4 hat-shaped ascospores that are released through deliquescence of the ascus wall. Physiology: Glucose and D-xylose are fermented. Nitrate is assimilated. Pellicles may form on liquid media. Extracellular starch-like compounds are not formed. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.26. Pichia: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae may be present. Sexual reproduction: Asci may be conjugated or unconjugated, and persistent or deliquescent; 1-4, rarely 8,

ascospores are produced that may be hat-shaped, hemispheroidal, or spheroidal and with or without a subequatorial ledge. Physiology: Sugars are fermented by some species. Nitrate is assimilated by some species. Pellicles may form on liquid media. Extracellular starch-like compounds are not formed. Inositol is assimilated by one species. Urease production is not determined. Gelatin may be liquified. 2.1.27. Protomyces: Vegetative reproduction: Budding is multilateral, but predominantly at the polar regions of cells. True hyphae are formed within the tissue of parasitized plants. Sexual reproduction: Asci are formed within plant host tissue and produce up to several hundred ellipsoidal ascospores that appear to be forcibly discharged. Physiology: Sugars are not fermented. Nitrate is assimilated by some species. Pellicles may form on liquid media. Extracellular starch-like compounds are generally formed. Inositol is not assimilated as a carbon source. Urease production is not determined. Gelatin may be weakly liquified. 2.1.28. Saccharomyces: Vegetative reproduction: Multilateral budding; pseudohyphae may be present, but not true hyphae. Sexual reproduction: Asci are persistent, generally unconjugated, and form 1 ^ smooth, ellipsoidal ascospores. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not formed. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.29. Saccharomycodes: Vegetative reproduction: Bipolar budding; pseudohyphae are absent or poorly developed; true hyphae are not formed. Sexual reproduction: Asci are unconjugated, persistent, and produce 1-4 smooth, spheroidal ascospores with a minute subequatorial ledge. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not formed. Inositol is not assimilated. Urease is not produced. Gelatin may be weakly liquified. 2.1.30. Saccharomycopsis: Vegetative reproduction: Multilateral budding and arthroconidia; pseudohyphae are present; true hyphae are abundant and often produce blastoconidia. Sexual reproduction: Asci are usually unconjugated, generally deliquescent, and often attached to hyphae, or sometimes free and spindle-like. The asci produce 1 ^ , rarely 8, ascospores that may be hat-shaped, reniform with terminal appendages, spheroidal or ellipsoidal, and may have one or more ledges. Surfaces may be smooth or roughened.

15. Discussion of teleomorphic and anamorphic ascomycetous yeasts and a key to genera / C.P. Kurtzman

Physiology: Sugars may or may not be fermented. Nitrate is not assimilated. Pellicles may be formed on liquid media. Extracellular starch-like compounds are not formed. Inositol may be assimilated. Urease production is not determined. Gelatin is not strongly liquified. 2.1.31. Saturnisporai Vegetative reproduction: Multilateral budding; pseudohyphae may be produced but true hyphae are not. Sexual reproduction: Asci are persistent or deliquescent and may be unconjugated or show conjugation between a cell and its bud or between independent cells. Asci produce 1-4, rarely 8, smooth, spheroidal ascospores that have an equatorial ledge. Physiology: Glucose is fermented. Nitrate is not assimilated. Pellicles may be formed on liquid media. Extracellular starch-like compounds are not formed. Inositol is not assimilated. Urease production is not determined. Gelatin may be weakly liquified. D-xylose is not assimilated. 2.1.32. Schizosaccharomyces: Vegetative reproduction: Cells divide by fission. True hyphae may develop and often fragment into arthrospores. Sexual reproduction: Asci are usually unconjugated, deliquescent, and produce 2-8 spheroidal, ellipsoidal or reniform ascospores. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are produced. Inositol is not assimilated. Urease production and gelatin liquefaction are not determined. 2.1.33. Sporopachydermia: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae are not formed. Sexual reproduction: Asci are deliquescent and may or may not be conjugated. The asci produce 14 spheroidal, subglobose, ellipsoidal or bacilliform ascospores. Physiology: Glucose fermentation is absent or weak. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is assimilated as a sole carbon source. Urease production is not determined. Gelatin is not liquified. 2.1.34. Stephanoascus: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae are produced. Blastoconidia may form on the true hyphae. Sexual reproduction: Asci are globose with an apical cap cell, persistent, and develop following fiision of hyphal gametangia. Ascospores are oblate to hat-shaped, and 2-4 are formed in an ascus. Physiology: Sugars are not fermented. Nitrate is not assimilated. Pellicle formation on liquid media is not determined. Extracellular starch-like compounds are

117

not produced. Inositol is assimilated by some species. Urease is not produced. Gelatin liquifaction is not determined. 2.1.35. Torulaspora: Vegetative reproduction: Multilateral budding; pseudohyphae may be formed but true hyphae are not. Sexual reproduction: Asci are persistent and may be unconjugated or show conjugation between a cell and its bud or between independent cells. Cells with tapered protuberances resembling conjugation tubes may also be present. Asci contain 1 ^ spheroidal ascospores that are either roughened or smooth. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.36. Wickerhamia: Vegetative reproduction: Bipolar budding; pseudohyphae and true hyphae are not formed. Sexual reproduction: Asci are unconjugated, deliquescent, and form 1-2, rarely 16, ascospores that somewhat resemble a baseball cap in shape. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease is not produced. Gelatin is not liquified. 2.1.37. Wickerhamiella: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae are not formed. Sexual reproduction: Asci are conjugated and form 1 roughened, asymmetrical, elongated ascospore. Asci deliquesce at the terminus and appear corrugated following spore release. Physiology: Sugars are not fermented. Nitrate is assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.38. Williopsis: Vegetative reproduction: Multilateral budding; pseudohyphae may form but true hyphae are absent. Sexual reproduction: Asci may be persistent or deliquescent and are unconjugated, or show conjugation between a cell and its bud or between independent cells. Asci produce 2-A smooth, spheroidal or ellipsoidal ascospores that have an equatorial ledge. Physiology: Glucose is fermented. Nitrate may or may not be assimilated. Pellicles are often formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin may be liquified. D-xylose is assimilated.

118

Va. Classification of the ascomycetous taxa

2.1.39. Yarrowia: Vegetative reproduction: Multilateral budding; occasional formation of arthroconidia. Pseudohyphae and true hyphae are produced. Sexual reproduction: Asci are unconjugated and slowly deliquesce at maturity. Asci form 1-4 ascospores that may be spheroidal, hemispheroidal, hat-shaped, or somewhat angular. Physiology: Sugars are not fermented. Nitrate is not assimilated. Pellicles are formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease is strongly produced. Gelatin is strongly liquified. Lipases are produced. 2.1.40. Zygoascus: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae are formed. Sexual reproduction: Asci are globose, persistent, and arise following conjugation between hyphal cells. Asci produce \-A ascospores that are hemispheroidal to hatshaped. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles may be formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is assimilated. Urease is not produced. Gelatin liquefaction is not determined. 2.1.41. Zygosaccharomyces: Vegetative reproduction: Multilateral budding; pseudohyphae may be formed but true hyphae are not. Sexual reproduction: Asci are persistent and may be unconjugated or show conjugation between a cell and its bud; asci predominantly form by conjugation between independent cells, often with both cells producing ascospores. Ascospores are smooth, spheroidal to ellipsoidal, with 1 ^ per ascus. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production is not determined. Gelatin is not liquified. 2.1.42. Zygozynta: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae are not formed. Sexual reproduction: Asci, which become deliquescent, arise from evaginations on single cells or from the bridge of conjugating cells, and produce 4 to numerous smooth, elongate ascospores that show an amber color. Physiology: Sugars are not fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are produced. Inositol may be assimilated. Urease production and gelatin liquefaction are not determined. 2.2. Anamorphic genera 2.2.1. Aciculoconidium: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae with blastoconidia are present.

Diagnostic of the genus is the presence of blastoconidia, each with a needle-shaped terminus and a rounded base. Physiology: Sugars are fermented. Nitrate is not assimilated. Pellicle formation on liquid media is not determined. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease is not produced. Gelatin liquifaction is not determined. 2.2.2. Arxula: Vegetative reproduction: Budding cells as well as arthroconidia are formed. Pseudohyphae and true hyphae are produced, the latter giving rise to blastoconidia that sometimes form on short denticles. Physiology: Sugars are not fermented. Nitrate is assimilated. Pellicles may be formed on liquid media. Formation of extracellular starch-like compounds is not determined. Inositol is assimilated. Urease production and gelatin liquefaction are not determined. 2.2.3. Blastobotrys: Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae are abundant. Diagnostic of the genus is production of blastoconidia on pedicels or denticles. Physiology: Sugars are fermented by some species. Nitrate is not assimilated. Pellicle formation on liquid media is not determined. Inositol is assimilated by some species. Formation of extracellular starch-like compounds, urease production and gelatin liquefaction are not determined. 2.2.4. Botryozyma: Vegetative reproduction: Multilateral budding; pseudohyphae are produced but true hyphae are absent. Diagnostic for this genus is the presence of terminal pseudohyphal cells that are dichotomously branched. Physiology: Sugars are not fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease production and gelatin liquefaction are not determined. 2.2.5. Brettanomyces (Teleomorph Dekkera): Vegetative reproduction: Multilateral budding; cells are spheroidal to ellipsoidal, and some have an ogival shape. Pseudohyphae may form, but true hyphae are not produced. Physiology: Sugars are fermented, and fermentation is usually stimulated by oxygen. Nitrate is assimilated by some strains. Pellicles may be formed on liquid media. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease is not produced. Gelatin liquefaction is not determined. Acetic acid is often produced. Growth is slow and generally shortlived. 2.2.6. Candida: Vegetative reproduction: Multilateral budding; cells are globose, ellipsoidal or cylindroidal, and occasionally

15. Discussion of teleomorphic and anamorphic ascomycetous yeasts and a key to genera / C.P. Kurtzman

119

ogival, triangular or lunate. Pseudohyphae and true Physiology: Sugars are not fermented. Nitrate is assimilated. Pellicles are not formed on liquid media. hyphae may be formed. Arthroconidia are not formed. Extracellular starch-like compounds are formed. InoPhysiology: Sugars may be fermented. Nitrate may be sitol is not assimilated. Urease production and gelatin assimilated. Pellicles may be formed on liquid media. liquefaction are not determined. Extracellular starch-like compounds are not produced. Inositol is assimilated by some species. Urease is not 2.2.12. Saitoella: produced. Gelatin may be liquified. Vegetative reproduction: Multilateral budding. Pseudo2.2.7. Geotrichum (Teleomorphs Dipodascus, Galactohyphae and true hyphae are absent. Growth is orange myces): to red in color. Vegetative reproduction: Arthroconidia and true hyphae Physiology: Sugars are not fermented. Nitrate is assimilated. Pellicles are not formed on liquid media. which disarticulate into arthroconidia. Extracellular starch-like compounds are not produced. Physiology: Sugars are fermented by some species. Nitrate Inositol is not assimilated. Urease is produced. Gelatin is not assimilated. Pellicle formation on liquid media is liquefaction is not determined. not determined. Inositol is not assimilated. Formation of extracellular starch-like compounds, urease production, 2.2.13. Schizoblastosporion: and gelatin liquefaction are not determined. Vegetative reproduction: Cell division is predominantly by bipolar budding. Pseudohyphae are absent or rudimen2.2.8. Kloeckera (Teleomorph Hanseniaspora): Vegetative reproduction: Bipolar budding; pseudohyphae tary; true hyphae are not formed. may form but true hyphae are absent. Physiology: Sugars are not fermented. Nitrate is not Physiology: Sugars are fermented. Nitrate is not asassimilated. Pellicles are not formed on liquid media. similated. Pellicles are not formed on liquid media. Extracellular starch-like compounds are not produced. Extracellular starch-like compounds are not produced. Inositol is not assimilated. Urease is not produced. Inositol is not assimilated. Urease is not produced. Gelatin liquefaction is not determined. Gelatin liquefaction is not determined. 2.2.14. Sympodiomyces: Vegetative reproduction: Budding is multilateral. Pseudo2.2.9. Lalaria (Teleomorph Taphrina): Vegetative reproduction: Budding is on or near the poles hyphae and true hyphae are present. Diagnostic for the genus is the sympodial production of blastoconidia on of the cells. Growth is pinkish or sometimes yellowish short conidiophores that arise directly from yeast cells. in color. Physiology: Sugars are not fermented. Inositol is not Physiology: Sugars are not fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. assimilated as a carbon source. Extracellular starch-like Extracellular starch-like compounds are not produced. compounds are formed. Inositol is assimilated. Urease is not produced. Gelatin 2.2.10. Myxozyma: is not liquified. Vegetative reproduction: Multilateral budding; pseudohyphae are absent or rudimentary; true hyphae are not 2.2.15. Trigonopsis: formed. Vegetative reproduction: Multilateral budding. Neither pseudohyphae nor true hyphae are produced. Diagnostic Physiology: Sugars are not fermented. Nitrate is not for the genus is the presence of triangular cells as well assimilated. Pellicles are not formed on liquid media. as ellipsoidal cells. Triangular cells bud at each apex. Extracellular starch-like compounds are produced. Inositol is assimilated by some species. Urease production Physiology: Sugars are not fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. is not determined. Gelatin may be liquified by some Extracellular starch-like compounds are not produced. species. Cultures are often quite mucoid. Inositol is not assimilated. Urease is not produced. 2.2.11. Oosporidium: Gelatin liquefaction is not determined. Vegetative reproduction: Multilateral budding; pseudohyphae and true hyphae may be present. Diagnostic of the genus is the presence of endospores, and growth that is light pink to light orange in color. 3. Key to the genera of ascomycetous yeasts All species are DBB negative, except for the weak reaction shown by Ascoidea africana, and the positive reactions shown by Sporopachydermia lactativora and S. quercuum under some test conditions. 1.

b 2(1).

Endomyces: p. 194 Endomycete-like genera: p. 197 Species are nonmycelial obligate parasites of Drosophila and characterized by linear ascospores coiled in a helix Coccidiascus: p. 153 Species are mycelial or nonmycelial, but can be grown on laboratory media -^ 2 Cell division is exclusively by fission, i.e., cross wall formation without constriction -^ 3 Cell division is not exclusively by fission -^ 6

a Species are mycelial obligate parasites of mushrooms

c a b

120 3(2). 4(3). 5(4). 6(2). 7(6). 8(7).

Va. Classification of the ascomycetous taxa a b a b a b a b a b a b c d

9(7). 10(6). 11(10). 12(11). 13(11). 14(13).

15(14).

a b a b a b a b a b a b c d e f g a b c

17(16).

d e a b a

18(17).

b c a

16(15).

19(18). 20(19).

21(19).

b a b a b c a b c d

22(21). 23(22).

e a b a b c

Growth is butyrous and yeastlike Schizosacchawmyces: Growth is predominantly mycelial; not exclusively yeastlike —> 4 Ascospores are not produced Geotrichum: Ascospores are produced -^ 5 Asci produce a single, ellipsoidal ascospore and completely deliquesce Galactomyces: Asci produce 4-100-plus ellipsoidal ascospores and deliquesce at the tip Dipodascus: Cell division is by bipolar budding on a broad base -^ 7 Cell division is by multilateral budding, or not exclusively by bipolar budding on a broad base —> 10 Ascospores are formed -^ 8 Ascospores are not formed -^ 9 Ascospores are cap-shaped Wickerhamia: Ascospores are smooth and spheroidal; asci are unconjugated, persistent, and form 4 spores, which often conjugate in pairs Saccharomycodes: Ascospores are roughened and spheroidal; asci show conjugation between a cell and its bud, are persistent, and form 1-2 spores, often with a bud serving as an ascus Nadsonia: Ascospores are hat-shaped, or roughened or smooth and spheroidal, and with or without an equatorial ledge; asci are unconjugated, persistent or deliquescent, and form 1 ^ spores when hat-shaped or 2 when spheroidal . . Hanseniaspom: Glucose is fermented Kloeckera: Glucose is not fermented Schizoblastosporion: Budding cells are markedly triangular Trigonopsis: Budding cells are not markedly triangular -^ 11 Some budding cells have an ogival shape; cultures smell of acetic acid and are short-lived -^ 12 Budding cells lack an ogival shape; cultures produce little or no acetic acid -^ 13 Ascospores are formed Dekkera: Ascospores are not formed Brettanomyces: Ascospores are formed -^ 14 Ascospores are not formed -^ 28 Asci are borne on the tips of refractile tube-like cells Pachysolen: Asci form brush-like clusters on the tips of erect ascophores Cephaloascus: Asci form percurrently inside older asci Ascoidea: Asci form between hyphae following conjugation, are globose, persistent and have an apical cap cell . Stephanoascus: Asci form between hyphae following conjugation, are globose, persistent, but lack an apical cap Zygoascus: Asci are elongated, open by apical deliquescence, and produce 32-100-plus ellipsoidal to reniform spores Dipodascopsis: Asci not as above ^15 Ascospores are needle-like, sometimes with a terminal extension; asci are deliquescent Eremothecium: Ascospores are needle-like; asci are persistent Metschnikowia: Ascospores are elongate, asymmetrical, roughened, and of minute size; asci deliquesce at the terminus and appear corrugated following release of the single spore Wickerhamiella: Ascospores are clavate; asci are deliquescent Clauispora: Ascospores not as above ^16 Hyphal septa have plugged pores that appear as small dots under the light microscope Ambrosiozyma: Hyphal septa, if present, do not have plugged pores -^ 17 Asci are predominantly attached to hyphae, or if fi"ee, are spindle-shaped; gelatin is not strongly liquified Saccharomycopsis: Asci may be fi-ee or attached to hyphae; strong liquefaction of gelatin Yarrowia: Asci are usually free and not spindle-shaped; gelatin is not strongly liquified -^ 18 Growth occurs between 30-40°C; amino acids, B-vitamins, and an increased level of atmospheric CO2 are required for growth Cynidomyces: Specialized growth conditions are not required —^ 19 Asci arise as sac-like attachments on a cell -^ 20 Asci are not as sac-like attachments -^ 21 Cultures are usually mucoid; ascospores are amber; asci do not arise attached to the bridge of conjugating cells Lipomyces: Cultures are usually mucoid; ascospores are amber; some asci arise attached to the bridge of conjugating cells Zygozyma: Cultures are not mucoid; ascospores are hyaline Babjeuia: Ascospores are spheroidal; asci are unconjugated and persistent -^ 22 Ascospores are long ellipsoidal; asci are unconjugated and persistent Lodderomyces: Ascospores are smooth, spheroidal or ellipsoidal, and have an equatorial ledge; asci may be conjugated and either deliquescent or persistent -^ 24 Ascospores are hat-shaped or spheroidal with a small subequatorial ledge; asci are either deliquescent or persistent Pichia: Ascospores and asci show combinations different from above -^ 25 Early formation of pellicles on liquid media Issatchenkia: No early formation of pellicles on liquid media —^ 23 Ascospores are roughened; nitrate is assimilated Citeromyces: Ascospores are roughened; nitrate is not assimilated Arxiozyma: Ascospores are smooth; nitrate is not assimilated Sacchawmyces:

p. 391 p. 574 p. 209 p. 181

p. 409 p. 372 p. 268 p. p. p. p.

214 580 602 605

p. 174 p. 450

p. p. p. p. p. p.

271 143 136 400 422 178

p. 201 p. 256 p. 411 p. 148 p. 129

p. 374 p. 420

p. 154

p. 248 p. 433 p. 141 p. 254

p. 273 p. 221 p. 146 p. 134 p. 358

121

15. Discussion of teleomorphic and anamorphic ascomycetous yeasts and a key to genera / C.R Kurtzman 24(21), 25(21). 26(25).

a b a b a b

27(25).

c a

b 28(13). 29(28).

30(28). 31(30).

a b a b c d a b a b c d e f

D-Xylose is assimilated Williopsis: D-Xylose is not assimilated Saturnispora: Glucose fermentation is early and vigorous -^ 26 Glucose fermentation is slow, weak, or absent —^ 27 Asci are persistent and may be conjugated or unconjugated; ascospores are roughened or smooth and spheroidal; cells with tapered protuberances are often present Torulaspora: Asci are persistent, often conjugated, with conjugation predominantly between independent cells, both of which usually produce ascospores; ascospores are smooth and spheroidal to short ellipsoidal Zygosaccharomyces: Asci are deliquescent; ascospores are smooth and reniform, bacilliform, ellipsoidal or spheroidal Kluyveromyces: Inositol is not assimilated as a sole source of carbon; ascospores are roughened or smooth, spheroidal or ellipsoidal, with or without an equatorial ledge, or smooth and lenticular; asci are usually conjugated and may be persistent or deliquescent Debaryomyces: Inositol is assimilated as a sole source of carbon; ascospores are smooth and spheroidal, subglobose, ellipsoidal, or bacilliform; asci are deliquescent Sporopachydermia: Cultures are red, pink, lavender or light yellow in color -^ 29 Cultures are white or tannish-white in color —> 30 Cultures are salmon red; weak presence of extracellular starch-like compounds Protomyces: Cultures are salmon red; extracellular starch-like compounds are not present Saitoella: Cultures are pink, lavender or light yellow; extracellular starch-like compounds are present Lalaria (Taphrina): Cultures are light pink to light orange; cells with endospores are present Oosporidium: Cultures are mucoid; extracellular starch-like compounds are present Myxozyma: Cultures are not mucoid; extracellular starch-like compounds are not present -^ 31 Blastoconidia with a needle-shaped terminus and a rounded base are present Aciculoconidium: Terminal pseudohyphal cells are dichotomously branched Botryozyma: Blastoconidia form on short denticles; nitrate is assimilated Arxula: Blastoconidia form on denticles; nitrate is not assimilated Blastobotrys: Sympodial production of blastoconidia on short conidiophores that arise directly from yeast cells; nitrate is not assimilated Sympodiomyces: Blastoconidia do not arise on markedly denticulate conidiophores and are not sympodially produced; nitrate may or may not be assimilated Candida:

p. 413 p. 387

p. 404 p. 424 p. 227

p. 157 p. 395

p. p. p. p. p.

353 600 582 598 592

p. p. p. p.

439 449 441 443

p. 603 p. 454

This Page Intentionally Left Blank

Chapter 16

A key to the anamorph genera of yeastlike Archi- and Euascomycetes G.S. de Hoog

Contents 1. Introduction 2. Key to yeastlike Archi- and Euascomycetes

123 123

1. Introduction A number of filamentous ascomycetous fiingi (Euascomycetes) grow yeastlike in culture and may be confiised with yeasts, which in the present book are conceived as either being of saccharomycetous or of basidiomycetous affinity. Euascomycetous anamorphs are distinguished from Saccharomycetes by having true hyphae with simple septal pores with Woronin bodies rather than micropores or dolipores, although in some genera of black yeasts Woronin bodies may be absent. Teleomorphs, where known, are perithecial or cleistothecial and belong to different orders of Ascomycetes. Hence the genera mentioned below are often of quite divergent relationships. Ascospores are rarely produced in culture. The fiingi mostly reproduce as Hyphomycetes by conidia, with additional budding cells. The main criteria for distinction of yeastlike Hyphomycetes are found in their morphology with the accent on details of conidiogenesis (Fig. 34). This classification does not correspond exactly with natural relationships based on teleomorph connections and supported by partial 18S rDNA sequence data. Some genera, thus, have to be taken as artificial entities (for example Phialophora and Microdochium), while in others the morphological groups have already been subdivided along natural lines (for example Sporothrix). The following biological relationships have been established thus far: (1) Archiascomycetes, order Taphrinales, genera Taphrina and Protomyces (Nishida and Sugiyama 1994, Nishida et al. 1995). (2) Euascomycetes, order Dothideales, fam. Dothideaceae.

The "black yeast" genera Aureohasidium, Hormonema, and probably Hortaea and the meristematic "black yeasts" Botryomyces, Phaeotheca and Sarcinomyces (de Hoog and Yurlova 1994, de Hoog et al. 1997b). (3) Euascomycetes, order Chaeothyriales, fam. Herpotrichiellaceae. The "black yeast" genera Exophiala, Phialophora, Rhinocladiella and Phaeococcomyces (de Hoog 1977). Note that Phaeococcomyces is morphologically reminiscent of the basidiomycetous yeasts Moniliella and Trichosporonoides, which are distinguished by fermentation of glucose. Phialophora is phylogenetically heterogeneous, but a small group around the generic type species, P verrucosa, contain herpotrichiellaceous species. (4) Euascomycetes, order Ophiostomatales, fam. Ophiostomataceae. Genus Sporothrix. Note that basidiomycetous Sporothrix-likQ species are now classified in Cerinosterus, and saccharomycetous Sporothrix-likQ species in Candida (de Hoog 1992). (5) Euascomycetes, Sphaeriales, fam. Coniochaetaceae. Most Lecythophora species probably are cultural states of members of this family (Mahoney and LaFavre 1981). (6) Euascomycetes, Leotiales, fam. Leotiaceae. Aureohyphozyma is an anamorph genus of Gelitanipulnioella (Hosoya and Otani 1995). Myriogonium (Malloch and de Hoog, ch. 31, p. 198) and Calyptrozyma (Boekhout et al. 1995b) may also be related, the latter having some similarity to members of the Thelebolaceae. Physiological patterns have been determined for a limited number of species. Diagnostic features are given in a simplified manner in the generic key below. Since characters may be variable within each genus, additional criteria are sometimes listed. For each genus, some references are given for fiirther reading.

2. Key to yeastlike Archi- and Euascomycetes 1. 2(1).

a Conidiogenesis meristematic, by gradual swelling of the entire thallus, and with subsequent disarticulation; colonies slimy or moriform, restricted, black —> 2 b Conidiogenesis blastic or phialidic, by blowing out conidia; colonies more expanding, black, pink, yellow or white -^ 4 a Conidiogenesis endogenous; conidia liberated by disruption of parent cell walls; L-rhamnose and inulin not assimilated (Sigler et al. 1981) Phaeotheca Sigler, Tsuneda & Carmichael b Conidia in packets, liberated by disarticulation; L-rhamnose and inulin assimilated -^ 3 123

Va. Classification of the ascomycetous taxa

124

rCEQ

€>

QS> 8

10

12

13

^

14

a. 77^

^

15

Fig. 34. Diagram of characteristic morphologies of anamorph genera of yeastlike Euascomycetes: (1) Botryomyces; (2) Sarcinomyces; (3) Phaeotheca; (4) Phaeococcomyces; (5) Aureobasidium; (6) Hormonema; (7) Hortaea; (8) Exophiala; (9) Rhinocladiella; (10) Sporothrix; (11) Trichosporiella; (12) Phialophora; (13) Phialemonium; (14) Lecythophora; (15) Hyphozyma.

3(2).

4(1). 5(4). 6(4). 7(6). 8(7).

a Conidial packets black, with septa at right angles; additional blastic conidia occasionally present; glucuronate assimilated (Sigler et al. 1981) Sarcinomyces Lindner b Conidial packets initially whitish, cauliflower-like, with oblique septa; blastic conidia absent; glucuronate not assimilated (de Hoog and Rubio 1982, de Hoog and Guarro 1995) Botryomyces de Hoog & Rubio a Hyphae absent or nearly absent -^ 5 b Hyphae predominant —> 6 a Colonies pale pigmented, mostly pinkish or purplish (Kramer 1987) Taphrinales b Colonies black (de Hoog 1977 (as Phaeococcus), de Hoog et al. 1995) Phaeococcomyces de Hoog a Conidia sessile or on denticles, formed next to each other on the same cell (at least initially), occasionally in short chains that elongate at the apex -^ 1 b Conidia produced one after another through the same scar or opening and adhering in slimy balls (phialidic or annellidic) -^ 10 a Hyphae mostly over 3 fxm wide, locally transformed into chlamydospores (Hermanides-Nijhof 1977, de Hoog and Yurlova 1994) Aureobasidium Viala & Boyer b Hyphae mostly less than 3 (im wide; chlamydospores absent -^ 8 a Conidial apparatus dark olivaceous brown (de Hoog 1977, Veerkamp and Gams 1983) Rhinocladiella Nannfeld b Conidial apparatus hyaline or subhyaline —> 9

16. A key to the anamorph genera of yeastlike Archi- and Euascomycetes / G.S. de Hoog 9(8).

10(6). 11(10).

12(11).

13(10). 14(13). 15(14). 16(15). 17(16). 18(17).

125

a Conidia close together on terminal denticles, often also alongside hyphae; erythritol and nitrate assimilated (de Hoog 1974, 1992) Sporothrix Hektoen & Perkins ex Nicot & Mariat b Conidia scattered alongside hyphae only; erythritol and nitrate not assimilated (de Hoog et al. 1985) Trichosporiella Kamyschko ex W. Gams & Domsch a Colonies olivaceous-black; hyphae regularly olivaceous —^\\ b Colonies pale pinkish, reddish or yellowish, often later turning brown; hyphae hyaline or locally becoming pigmented -^13 a Expanding hyphae mostly less than 2.5 fxm wide; conidia produced from inconspicuous annellated zones or from collarettes -^ 12 b Expanding hyphae often over 3 jJim wide; annellated zones conspicuous, about 2|im wide (Miyaji and Nishimura 1985, de Hoog and Gerrits van den Ende 1992) Hortaea Nishimura & Miyaji a Conidia produced through pronounced collarette openings (Domsch et al. 1980, Wang and Zabel 1990, Yan et al. 1995) Phialophora Medlar b Conidia produced from inconspicuous annellated zones (de Hoog 1977, de Hoog et al. 1995, de Hoog and Guarro 1995) Exophiala Carmichael a Conidia produced from flat, barely visible openings ^ 1 4 b Conidia produced from hyaline collarettes (Gams and McGinnis 1983) Lecythophom Nannfeld a Hyphae often over 3 |im wide, with local chlamydospores (Hermanides-Nijhof 1977) Hormonema Lagerberg & Melin b Hyphae mostly less than 3 ^m wide; chlamydospores absent ^ 1 5 a Colonies pink -^ 16 b Colonies whitish or cream-colored (Gams and McGinnis 1983) Phialemonium W. Gams & McGinnis a Conidia formed on ampulliform cells; local clusters of brown chlamydospores present (Domsch et al. 1980) Microdochium H. Sydow b Conidia formed alongside hyphae or on irregular protrusions; chlamydospores absent -^ 17 a Colonies pink, occasionally becoming brown (de Hoog and Smith 1981, 1986) Hyphozyma de Hoog & M.Th. Smith b Colonies yellowish to olive-brown, then with yellow pigment exuded into the medium -^18 a Melibiose and ethylamine assimilated (Boekhout et al. 1995b) Calyptrozyma Boekhout & Spaaij b Melibiose and ethylamine not assimilated (Hosoya and Otani 1995) Aureohyphozyma Hosoya & Otani

This Page Intentionally Left Blank

Part Vb

Descriptions of teleomorphic ascomycetous genera and species Contents Ambrosiozyma A. ambrosiae A. cicatricosa A. monospora A. philentoma A. platypodis Arxiozyma A. telluris Ascoidea A. africana A. corymbosa A. hylecoeti A. rubescens Babjeuia B. anomala Cephaloascus C albidus C. fragrans Citeromyces C matritensis Clavispora C. lusitaniae C. opuntiae Coccidiascus C. legeri Cyniclomyces C guttulatus Debaryomyces D. carsonii D. castellii D. coudertii D. etchellsii D. hansenii D. maramus D. melissophilus D. nepalensis D. occidentalis D. polymorphus D. pseudopolymorphus D. robertsiae D. udenii D. vanrijiae D. yamadae Dekkera D. anomala D. bruxellensis Dipodascopsis D. tothii D. uninucleata Dipodascus D. aggregatus D. albidus D. ambrosiae

129 129 130 131 131 132 134 134 136 137 137 138 139 141 141 143 143 144 146 146 148 148 150 153 153 154 154 157 158 159 160 160 161 163 164 164 165 166 167 168 169 170 171 174 174 175 178 178 179 181 182 183 184

D. armillariae 184 D. australiensis 185 D. capitatus 186 D. geniculatus 187 D. ingens 188 D. macrosporus 189 D. magnusii 189 D. ovetensis 190 D. spicifer 191 D. tetrasperma 192 Endomyces 194 E. cortinarii 194 E. decipiens 194 E. polyporicola 195 E. scopularum 195 Endomycete-like genera of mycoparasitic ftingi 197 Eremothecium 201 E. ashbyi 201 E. coryli 202 E. cymbalariae 204 E. gossypii 204 E. sinecaudum 205 Galactomyces 209 G. citri-aurantii 209 G. geotrichum 210 G. reessii 212 Hanseniaspora 214 H. guilliermondii 215 H. occidentalis 215 H. osmophila 216 H. uvarum 217 H. valbyensis 218 H. vineae 219 Issatchenkia 221 /. occidentalis 221 /. orientalis 222 /. scutulata 224 /. terricola 225 Kluyueromyces 227 K. aestuarii 229 K. africanus 230 K. bacillisporus 230 K. blattae 231 K. delphensis 232 K. dobzhanskii 233 K. lactis 233 K. lodderae 235 K. marxianus 236 K. phaffii 239 K. polysporus 239 K. thermotolerans 240 K. waltii 241

K. wickerhamii K. yarrowii Lipomyces L. japonicus L. kononenkoae L. lipofer L. starkeyi L. tetrasporus Lodderomyces L. elongisporus Metschnikowia M agaves M. australis M. bicuspidata M. gruessii M hawaiiensis M. krissii M. lunata M. pulcherrima M. reukaufii M. zobellii Nadsonia N. commutata N. fulvescens Pachysolen P. tannophilus Pichia P. acaciae P alni P. americana P. amethionina P. amylophila P. angophorae P. angusta P. anomala P. antillensis P barkeri P besseyi P. bimundalis P. bispora Pbovis P burtonii P. cactophila P. canadensis P. capsulata P. caribaea P castillae P chambardii P ciferrii P delftensis P deserticola P. dryadoides P. euphorbiae

242 243 248 249 250 251 252 252 254 254 256 257 258 259 260 261 262 263 264 265 266 268 268 269 271 271 273 282 282 283 284 285 286 286 287 288 289 290 291 291 292 293 294 295 296 297 298 298 299 299 300 301 301

128

P. euphorbiiphila Rfabianii P. farinosa P. fermentans Pfinlandica Pfluxuum P. galeiformis P. glucozyma P. guilliermondii P. hampshirensis P haplophila Pheedii P. heimii P. henricii Pholstii P. inositovora P. jadinii P. japonica P. kluyueri P. kodamae P lynferdii P media P membranifaciens P methanolica P. methylivora P. mexicana P. meyerae P. minuta P. mississippiensis P. naganishii P. nakasei P. nakazawae P. noruegensis P. ofunaensis P. ohmeri P. onychis P. opuntiae P. pastoris P. petersonii P. philodendri P. philogaea P. pijperi P pini P. populi P. pseudocactophila P. quercuum P. rabaulensis P. rhodanensis P. salicaria P scolyti

Vb. Descriptions of teleomorphic ascomycetous genera and species

302 303 304 305 305 306 307 307 308 309 310 310 311 311 312 313 314 315 315 317 317 318 319 321 321 322 323 324 325 325 326 327 328 328 329 330 330 331 332 333 333 334 334 335 336 337 337 338 338 339

P. segobiensis P siluicola P. spartinae P stipitis P. strasburgensis P. subpelliculosa P sydowiorum P. tannicola P. thermotolerans P. toletana P trehalophila P. triangularis P. ueronae P. wickerhamii P xylosa Protomyces P. gravidus P. inouyei P. inundatus P. lactucaedebilis P. macrosporus P. pachydermus Saccharomyces S. barnettii S. bayanus S. castellii S. cereuisiae S. dairenensis S. exiguus S. kluyueri S. paradoxus S. pastorianus S. rosinii S. servazzii S. spencerorum S. transuaalensis S. unisporus Saccharomycodes S. ludwigii Saccharomycopsis S. capsularis S. crataegensis S. fermentans S. fibuligera S. jauanensis S. malanga S. schoenii S. selenospora S. synnaedendra S. vini

340 340 341 342 343 344 344 345 346 346 347 348 348 349 350 353 354 354 354 355 355 356 358 359 360 360 361 363 364 365 366 367 367 368 368 369 370 372 372 374 375 376 377 377 379 379 380 381 382 383

Saturnispora S. ahearnii S. dispora S. saitoi S. zaruensis Schizosaccharomyces S. japonicus S. octosporus S. pombe Sporopachydermia S. cereana S. lactativora S. quercuum Stephanoascus S. ciferrii S. farinosus S. smithiae Torulaspora T. delbrueckii T. globosa T. pretoriensis Wickerhamia W. fluorescens Wickerhamiella W. domercqiae Williopsis W. californica W. mucosa W. pratensis W. salicorniae W. saturnus Yarrowia Y. lipolytica Zygoascus Z. hellenicus Zygosaccharomyces Z. bailii Z bisporus Z cidri Z fermentati Z florentinus Z. mellis Z microellipsoides Z mrakii Z rouxii Zygozyma Z arxii Z oligophaga Z smithiae Z suomiensis

387 387 388 389 390 391 391 392 393 395 395 396 397 400 400 401 402 404 404 406 406 409 409 411 411 413 413 415 415 416 416 420 420 422 422 424 424 426 426 427 428 429 430 430 431 433 433 434 434 435

129

17. Ambrosiozyma van der Walt / M.Th. Smith

17. Ambrosiozyma van der Walt M.Th. Smith Diagnosis of tlie genus Abundant formation of true mycelium with blastoconidia; in addition, budding yeast cells and pseudomycelium are present. Hyphal septa have a central, plugged pore surrounded by a thickening of the wall (dolipore-like). In light microscopy, the plugged pore shows as a small dark dot in the middle of the septum. Asci are generally formed on the hyphae. Ascospores are hat-shaped. Sugars are fermented, often slowly and weakly. Nitrate is assimilated by some species. Diazonium blue B reaction is negative. Type species Ambrosiozyma

monospora

(Saito) van der Walt

Species accepted \. Ambrosiozyma 2. Ambrosiozyma ?>. Ambrosiozyma 4. Ambrosiozyma 5. Ambrosiozyma

ambrosiae (van der Walt & D.B. Scott) van der Walt (1972) cicatricosa (D.B. Scott & van der Walt) van der Walt (1972) monospora (Saito) van der Walt (1972) philentoma van der Walt, D.B. Scott & van der Klift (1972) platypodis (J.M. Baker & Kreger-van Rij) van der Walt (1972)

Key to species See Table 16. 1. 2(1). 3(2). 4(3).

a b a b a b a b

Nitrate assimilated Nitrate not assimilated -^ 2 L-Rhamnose assimilated L-Rhamnose not assimilated -^ 3 L-Arabinose assimilated -^ 4 L-Arabinose not assimilated 2-Keto-D-gluconate assimilated 2-Keto-D-gluconate not assimilated

A. platypodis:

p. 132

A. philentoma:

p. 131

A. ambrosiae: p. 129 A. cicatricosa: p. 130 A. monospora: p. 131

Table 16 Key characters of species assigned to the genus Ambrosiozyma Species

Assimilation L-Rhamnose

Ambrosiozyma ambrosiae

L-Arabinose

-

+

A. monospora

-

+

A. philentoma

+

-

A. platypodis

+

-

17.1. Ambrosiozyma ambrosiae (van der Walt & D.B. Scott) v a n der Walt (1972)

Synonyms:

Pichia ambrosiae van dQT Walt &DB. Scott (\9i\h) Hormoascus ambrosiae (ym der Walt &DB.Scotx)Ym der Walt & ^ Growth in malt extract: After 3 days at 25°C, the cells are spheroidal to ovoidal or short ellipsoidal ( 2 . 0 6.0)x(4.0-9.0-12.0)|im, and occur singly, in pairs or in

Nitrate

-

A. cicatricosa

Systematic discussion of tlie species

2-Keto-D-gluconate

small clusters. A sediment and occasionally a ring are formed. After one month at room temperature the culture ^^^^-^^^ ^^ ^ ^^-^^ ^^^^^^^ ^^ ^^jj^ ^^^ j^^j ^^^^^^ Growth on malt agar: After one month at room temperature, the Streak Culture is butyrous, somewhat raised, rather dull, smooth or slightly rugose and graywhite to creamish-brown or occasionally pink in areas which sporulate heavily. The margin is slightly irregular without aerial mycelium.

130

Vb. Descriptions of teleomorphic ascomycetous genera and species

Dalmau plate cultures on potato- and corn meal agar: Pseudohyphae as well as true, branched hyphae are produced in the agar under the coverslip. Clusters of small, spheroidal blastoconidia develop near or at the septa of the mycelial hyphae. Anastomoses are occasionally observed between the hyphae. Formation of ascospores: Ascus formation is usually preceded by conjugation between independent cells. The zygote generally divides to form a short chain of cells, and one or sometimes several successive terminal cells serve as asci. The asci, which become deliquescent, usually produce four hat-shaped spores. Van der Walt and Scott (1971a) reported that single-spore isolates form sporogenous colonies, thus indicating the species to be homothallic. Ascospores were observed on V8- and 5% Difco malt agars. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Synonym: Pichia cicatricosa D.B. Scott & van der Walt (1971b)

Growth in malt extract: After 3 days at 25°C, cells are short-ovoidal to elongate, pear- and lemon-shaped, (38)x(6-14)(im, single or in pairs. Buds are formed on a broad base; more than one bud may be formed at the same site leading to multiple scars on the parent cell. Abundant branched mycelium with a diameter of 2.55 |im is present. A flocculant sediment is formed. After one month at \TC a thick lumpy mass is present. The culture has a fragrant odor. Growth on malt agar: After one month at 17°C, the streak is cream colored to yellow, tough, dull and raised in the middle. The edge is fringed with mycelium. Dalmau plate cultures on potato- and corn meal agar: Branched mycelium is formed with groups of spheroidal to elongate blastoconidia at the end of the hyphae or alongside them, often in loose groups. Some blastoconidia produce a series of buds at the top and show polar elongation with multiple scars, the dactyloid cells (Scott and van der Walt 1971b). Pseudomycelium may be present. Formation of ascospores: Asci are spheroidal or shortovoidal and situated singly or in groups, occasionally among blastoconidia, at the end of the hyphae or alongside hyphae at the septa. Asci contain one to four, often two hat-shaped spores which are generally not liberated. Spores measure (5-6)x(10-12)|im, including the brim (Scott and van der Walt 1971b). Ascospores were observed on corn meal, oatmeal, and V8 agars. Fermentation: Glucose Galactose Sucrose Maltose

Additional assimilation tests and other growth characteristics: 0.1% Cycloheximide + Growth at 35T Starch formation Growth at 37°C Co-Q: 7, CBS 6003 (Yamada et al. 1987b) Mol% G + C: 34.7 (S.A. Meyer, cited in Barnett et al. 1990)

17.2. Ambrosiozyma cicatricosa (D.B. Scott & van der Walt) van der Walt (1972)

v -

Origin of the strains studied: CBS 6003 (ATCC 24613; NRRL Y-7524), from tunnels oiPlatypus externedentatus, Zululand, South Africa, type strain of Pichia ambrosiae; CBS 6816, unknown, N.J.W. Kreger-van Rij; CBS 7108, from Crossotarsus sp. infestation of moribund Ficus sycomorus, South Africa, J.P. van der Walt; CBS 8256, from tunnels of Crossotarsus externedentatus, South Africa, J.P. van der Walt. Type strain: CBS 6003 (ATCC 24613), isolated by van der Walt.

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + v + + + n -

17. Ambrosiozyma van der Walt / M. Th. Smith

Additional assimilation tests and other growth characteristics: 0.1% Cycloheximide + Growth at 3T^C Starch formation Co-Q: Not determined. Mol% G + C: 40.2 (S.A. Meyer, cited in Barnett et al. 1990)

+

Origin of the strains studied: CBS 6157 (ATCC 24611), from tunnels of Xyleborus torquatus in Cussonia umbelifem, Natal, South Africa, J.R van der Walt, type strain of Pichia cicatricosa; CBS 6158, from tunnels of Xyleborus torquatus and Platypus externedentatus in Macaranga capensis, South Africa, received from J.R van der Walt. Type strain: CBS 6157. 17.3. Ambrosiozyma monospora (Saito) van der Walt (1972) Synonyms: Endomycopsis monospora Saito (1932) Endomycopsisfibuligera(Lindner) Dekker var. monospora (Saito) Lodder & Kreger-van Rij (1952) Pichia monospora (Saito) Pignal (1968) Endomyces bispora Verrall (1943) [nee Endomyces bisporus Beck (1922)] Endomycopsis fasciculata Batra (1963a) Pichia fasciculata (Batra) Boidin, Abadie & Lehodey (1965a) Pichia crossotarsi Batra (1971)

Growth in malt extract: After 3 days at 25°C, the culture consists of mycelial hyphae with side branches with a diameter of 1.5-5.5 ^m, and spheroidal to shortovoidal, budding yeast cells measuring (7-9) x (7-13) ^im, single, in pairs or in chains. Pseudomycelium may also be present. The culture has a fragrant odor. A loose, flocky sediment is formed. After one month at 17°C a thick, lumpy sediment, filling up the liquid, and a broad ring are present. Growth on malt agar: After one month at 17°C, the streak culture is yellow to yellow-brown, tough, raised, dull, and delicately wrinkled over the whole surface. The margin is fringed with mycelium.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

131

+

V

Lactose Raffinose Trehalose

-

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

+

V

+

-

+ + + +

-

+

-

+ +

-

V

-

-

+ + + +

-

+ + + +

-

+ + V

-

n

Additional assimilation tests and other growth characteristics: V

0.1% Cycloheximide + Growth at 37T + Starch formation Co-Q: 7 (Yamada et al. 1976b) Mol% G + C: 38.0 {T^: Nakase and Komagata 1970b); 38.3-39.5 (S.A. Meyer, cited in Barnett et al. 1990)

Origin of the strains studied: CBS 2554 (ATCC 56618; NRRL Y-1484), exudate of coconut palm; CBS 5514 (ATTC 14628, IFO 1965, NRRL Y-5955), type strain of Endomycopsis fasciculata, from Pinus strobus, L.R. Batra; CBS 5515 (ATCC 56460, NRRL Y-1081), type strain of Endomyces bispora, tunnels of Platypus compositus, LJ. Wickerham; CBS 6392 (ATCC 18855), type strain of Pichia crossotarsi, ambrosia fungus of Crossotarsus wollastoni. Type strain: CBS 2554, the original strain described as Endomycopsis monospora by Saito and isolated from coconut palm.

Dalmau plate cultures on potato- and corn meal agar: True, branched mycelium is formed. Spheroidal to short-ovoidal blastoconidia occur in chains or in clusters at the end of the mycelial hyphae or alongside them. Small protuberances may occur on the hyphae. Pseudomycelium may be present.

Synonym: Hormoascus philentomus (van der Walt, D.B. Scott & van der Klift) van der Walt & von Arx (1985)

Formation of ascospores: Asci are spheroidal or ovoidal, and are situated at the end of the mycelial hyphae or alongside them at the septa. Single spores give cultures which sporulate again (Batra 1963 a). Spores are hatshaped; one to two are formed per ascus. They measure, including the brim, (3-4) x (6-8) |im, and are released from the ascus. The presence of many spores give the culture a brownish appearance. Ascospores were observed on 5% Difco malt-, cornmeal-, potato-, and YM agars.

Growth in malt extract: After 3 days at 25°C, cells are spheroidal, short-ovoidal and ovoidal, (3.5-7) x(5-10) |im, single, in pairs or small chains. Pseudomycelium and true mycelium, may be present. A loose sediment is present. After one month at 17°C a thick lumpy sediment filling up the liquid is formed. The culture has a fragrant odor. Growth on malt agar: After one month at 17°C, the streak culture is cream colored to brownish, tough, raised, slightly wrinkled or smooth and dull. The margin is fringed with mycelium.

17.4. Ambrosiozyma philentoma van der Walt, D.B. Scott & van der Klift (van der Walt 1972)

132

Vb. Descriptions of teleomorphic ascomycetous genera and species

Dalmau plate cultures on potato- and corn meal agar: Abundant formation of branched mycelium with spheroidal to ovoidal and long-ovoidal blastoconidia at the ends of hyphae, along them, at the septa in between, or often in small branched chains. Pseudomycelium, may be present. Formation of ascospores: Fusion between loose yeast cells occurs. Asci are spheroidal or ovoidal, situated terminally or laterally on the hyphae, often in small chains. They contain one to four, usually four, hat-shaped ascospores which are easily liberated. According to van der Walt (1972), the species is homothallic. Ascospores were observed on V8-, 5% Difco malt-, and corn meal agars. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Formation of ascospores: Conjugation between yeast cells may occur. The zygote forms buds or hyphae; the former may turn directly into asci, the latter may bear spheroidal or ovoidal asci terminally or laterally, often in small clusters. Anastomoses between hyphae may also occur. Asci contain one to four, usually four, hat-shaped spores which are easily released from the ascus. The presence of many spores gives the culture a brownish color. Single ascospores give cultures which sporulate again. Ascospores were observed on 5% Difco malt-, cornmeal-, potato and YM agars. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Additional assimilation tests and other growth characteristics: 0.1% Cycloheximide + Growth at 30"C Starch formation Growth at 35''C Co-Q: 7 (Goto and Takami 1986) Mol% G + C: 35.1 (S.A. Meyer, cited in Barnett et al. 1990)

Growth on malt agar: After one month at 17°C, the streak culture is yellow with an orange tinge, tough, raised in the middle, dull and strongly plaited; the edge is fringed with mycelium. Dalmau plate cultures on potato- and corn meal agar: True branched mycelium with spheroidal, ovoidal to long-ovoidal, blastoconidia is abundantly formed. The blastoconidia occur singly, in clusters or in short chains near the septa or in between. Anastomoses between the hyphae may occur. Pseudomycelium may be present.

+

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v

Lactose Raffinose Trehalose

v

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + v + + n + -

Origin of the strains studied: CBS 6276 (ATCC 24607, IFO 1847, NRRL Y-7523); CBS 6279, tunnel of Xyleborus aemulus, South Africa, J.P. van der Walt. Type strain: CBS 6276, received from J.P. van der Walt. Additional assimilation tests and other growth characteristics: 0.1% Cycloheximide + Growth at 35T v 17.5. Ambrosiozyma platypodis (J.M. Baker & Starch formation Growth at 37°C Kreger-van Rij) van der Walt (1972) Synonyms: Endomycopsis platypodis J.M. Baker & Kreger-van Rij (1964) Hansenula platypodis (J.M. Baker & Kreger-van Rij) Fiol (1967) Hormoascus platypodis (J.M. Baker & Kreger-van Rij) von Arx (1972)

Growth in malt extract: After 3 days at 25T, the cells are spherical, 5-9 |im, single or in pairs. Mycelial hyphae and pseudomycelium are also present. A sediment and a ring are formed. The culture has a sour fruity odor.

Co-Q: 7 (Yamada et al. 1976b) Mol% G + C: 28.5-33.4, 4 strains (T^: Nakase and Komagata 1969); 36.6-36.8 (Nakase and Komagata 1971b); 38.3-39.5 (S.A. Meyer, cited in Barnett et al. 1990)

Origin of the strains studied: CBS 4111 (ATCC 24747; NRRL Y-6732), tunnel of Platypus cylindrus, UK, J.M. Baker; CBS 4380, ex CBS 4111, J. Lodder; CBS 7105, CBS 7106, from Platypus sp. in Notophagus cunninghamii, Tasmania, G.S. de Hoog.

17. Ambrosiozyma van der Walt / M. Th. Smith

Type strain: CBS 4111, isolated by J.M. Baker

133

Kreger-van Rij (1984b) retained A. platypodis in the genus Ambrosiozyma but excluded A. ambrosiae because Comments on the genus Kreger-van Rij and Veenhuis (1973) were unable to find Van der Walt (1972) introduced Ambrosiozyma to ac- dolipores. Consequently, Kurtzman (1984d) retained this commodate mycelial yeast species which are associated latter species in Pichia. Van der Walt and von Arx with bark beetles and are characterized by hyphal septa (1985) emended Hormoascus to include nitrate-positive with dolipores. He transferred Pichia ambrosiae and and nitrate-negative species and transferred P. ambrosiae, P. cicatricosa, as well as some Endomycopsis species, A. platypodis and A. philentoma to Hormoascus. Kurtzsuch as E. monospora and E. platypodis, to this genus. man and Robnett (1994a, 1995) demonstrated from comShortly thereafter, von Arx (1972) described Hormoascus parisons of rRNA/rDNA sequences that Ambrosiozyma to accommodate the nitrate assimilating A. platypodis. and Hormoascus are congeneric.

134

Vb. Descriptions of teleomorphic ascomycetous genera and species

18. Arxiozyma van der Walt & Yarrow C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal, ovoidal or occasionally elongate. True hyphae are not produced, but pseudohyphae may form. Pellicles are not formed on the surface of liquid media. Asci are unconjugated, persistent, and produce one, or rarely two, spheroidal ascospores. Ascospores are verrucose to tuberculate. Glucose is fermented. Coenzyme Q-6 is produced. Diazonium blue B reaction is negative. Type species Arxiozyma telluris (van der Walt) van der Walt & Yarrow Species accepted \. Arxiozyma telluris (van der Walt) van der Walt & Yarrow (1984) Systematic discussion of the species 18.1. Arxiozyma telluris (van der Walt) van der Walt i& Yarrow (1984b) Anamorph: Candida pintolopesii (van Uden) S.A. Meyer & Yarrow Synonyms: Saccharomyces telluris (as S. tellustris) van der Walt (1957) Torulopsis pintolopesii van Uden (1952) Candida pintolopesii (van Uden) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Candida bovina van Uden & do Carmo-Sousa (1957) Torulopsis bouina (van Uden & do Carmo-Sousa) van Uden & Vidal-Leiria (1970) Candida slooffii van Uden & do Carmo-Sousa (1957) Torulopsis pintolopesii van Uden var. slooffii Mendonga-Hagler & Phaff(1975)nom. inval. Candida pintolopesii (van Uden) S.A. Meyer & Yarrow var. slooffiae (van Uden & do Carmo-Sousa) Mendonga-Hagler & Phaff ex S.A. Meyer, Aheam & Yarrow (1984)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal, ellipsoidal, or infrequently elongate (2.9-6.0) x (4.5-7.5) jim, and single, in pairs, or in small clusters. Growth is butyrous, dull-glistening, and tannish-white. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows no true hyphae. Pseudohyphae may be formed by some strains. Aerobic growth is white to tannish-white, faintly glistening, and butyrous. Single colonies are low convex with a depressed center. A pleasant, faintly acidic odor is present. Formation of ascospores: Asci are transformed from unconjugated vegetative cells and produce one, or infrequently two, spheroidal ascospores. Asci are persistent (Fig. 35). Transmission electron microscopy shows ascospore surfaces to be roughened by protuberances that arise from the outer layer of the spore wall (van der Walt

and Yarrow 1984b). It is not known whether this species is homothallic or heterothallic. Ascospores were observed on McClary's acetate, YM, and V8 agars after 4-7 days at 25'^C. Acetate agar gave markedly better ascosporulation than the other media tested. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

Lactose Raffinose Trehalose

-

+

iV-Acetyl-D-glucosamine

-

Starch formation Gelatin liquefaction Growth at 2>TC

w/-

-

Methanol Ethanol w, Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate v Succinate v Citrate Inositol Hexadecane Nitrate Vitamin-free Additional assimilation tests and other growth characteristics: -2-Keto-D-gluconate -5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: 6, (Yamada et al. 1976b). Mol% G + C: 32.3-34.0, 14 strains 1975).

+

(BD: Mendonga-Hagler and Phaflf

Origin of the strains studied: CBS 2685 (NRRL YB-4302), soil isolate, Cape Province, South Africa,

18. Arxiozyma van der Walt & Yarrow / C.P. Kurtzman

135

from J.R van der Walt; NRRL Y-7282 (CBS 6264), NRRL Y-7283, NRRL Y-7284 (CBS 6258), NRRL Y-7285, all from the nasal cavities of pigeons, U.S.A., from H.F. Hasenclever; NRRL Y-11611 (CBS 2675), from rodent droppings. New Zealand; NRRL Y-11612 (CBS 2676), mouse mammary gland, Netherlands; NRRL Y-11613 (CBS 2985), peritoneal fluid of a dead guinea pig, Indonesia; NRRL Y-11614 (CBS 5812), from a man, France. Type strain: CBS 2685, from soil. South Africa. Comments on the genus Arxiozyma telluris was initially isolated and described by van der Walt (1957) as Saccharomyces tellustris. The original spelling of the species name was treated as an orthographic error and changed to telluris (van der Walt 1970d). Kreger-van Rij (1966b) and Kurtzman et al. (1980b) reported the ascospore walls of S. telluris to have surface protuberances, and with the redescription of Saccharomyces by Yarrow (1984a), S. telluris became the only species in the genus to have roughened ascospore walls. Because of this unique ascospore topology, van der Walt and Yarrow (1984b) proposed that S. telluris was phylogenetically isolated and they described the new genus Arxiozyma. Kreger-van Rij (1958) proposed that S. telluris represented the teleomorph of Candida bovina, noting the phenotypic similarity between the two species as

Fig. 2)5. A. telluris, CBS 2685. Unconjugated asci, each with a spheroidal ascospore. After 1 week on McClary's acetate agar at 25°C. Bar=5 [xm.

well as ascosporulation in one strain of C bovina. Mendonga-Hagler and Phaff (1975) compared the extent of nDNA complementarity between S. telluris, C. bovina, C. slooffii and Torulopsis pintolopesii and showed that all species shared 80% or greater nDNA relatedness. Although Mendonga-Hagler and Phaff (1975) considered all four taxa to be conspecific, they proposed designating C. slooffii as a variety of T. pintolopesii because strains of C. slooffii consistently differed from other strains of the species by having a minimum growth temperature of 28°C, by exhibiting an absolute requirement for inositol, and by formation of pseudomycelium.

136

Vb. Descriptions of teleomorphic ascomycetous genera and species

19. Ascoidea Brefeld & Lindau G.S. de Hoog Diagnosis of the genus Colonies are smooth, moist or dry, mostly with an expanding, submerged mycelium. Species are often dimorphic, with colonies being restricted and yeastlike or expanding and hyphal. Budding cells and pseudomycelium are present or absent. Wide, true hyphae are present and form blastoconidia which are sessile or on denticles and occur singly or in short, branched chains. Asci are lateral or terminal on hyphae, ellipsoidal or acicular, with firm walls, and contain numerous ascospores which are liberated through a terminal opening; new asci are formed percurrently inside the remains of a previous ascus. Ascospores are ellipsoidal, with a unilateral, mucilaginous brim. Fermentation is absent. Urease is absent. Diazonium blue B reaction is negative, rarely weak. Type species Ascoidea rubescens Brefeld Species accepted \. Ascoidea africana Batra & Francke-Grosmann (1964) 2. Ascoidea corymbosa W. Gams & Grinbergs (1970) 3. Ascoidea hylecoeti Batra & Francke-Grosmann (1961) A. Ascoidea rubescens Brefeld (1891) Key to species See Table 17. Morphological key: 1.

2(1). 3(2).

a b a b a b

Conidia 23-38 fxm long Conidia less than 15 [im long -^ 2 Asci obclavate Asci ellipsoidal to broadly clavate -^ 3 Ascospores (2.5-4.0)x(3.5-5.5) [im Ascospores (2.3-2.6)x(2.8-3.6) |im

A. rubescens:

p. 139

A. hylecoeti:

p. 138

A. africana: p. 137 A. corymbosa: p. 137

Physiological key: 1. 2(1). 3(1).

a b a b a b

Sucrose assimilated —» 2 Sucrose not assimilated -^ 3 Lactose assimilated Lactose not assimilated Citrate assimilated Citrate not assimilated

A. rubescens: A. corymbosa: A. africana: A. hylecoeti:

p. p. p. p.

Table 17 Key characters to species in the genus Ascoidea Species

Assimilation Sucrose

Ascoidea africana A. corymbosa A. hylecoeti A. rubescens

Maltose

Lactose

D-Arabinose

D-Ribose

Erythritol

Citrate

Nitrate

Tolerance to 10% NaCl

139 137 137 138

19. Ascoidea Brefeld & Lindau / G.S. de Hoog

137

Systematic discussion of the species 19.1. Ascoidea africana Batra & FranckeGrosmann (1964) Growth on 4% malt extract agar: After 10 days at 20-22°C, colonies are cream colored, smooth, thin, moist at the center and with a flat, somewhat farinose marginal zone. Hyphae are 3-5 ^m wide, irregularly branched, and bear groups of blastoconidia at irregular distances. Conidia are sessile, clavate, of variable size, and bear a dense cluster of ellipsoidal secondary conidia on small denticles at the tip; secondary conidia are about 3x5 jim. Formation of ascospores: Asci are formed singly or in small whorls alongside hyphae, mostly inserted just below distal septa, and broadly ellipsoidal, (8-13)x(20-30)|im, with firm walls containing 16-70 ascospores which are liberated by apical deterioration of the ascus. Ascospores are hat-shaped, (2.5^.0)x(3.5-5.5) |im, cohering in slimy balls after liberation. New asci are formed percurrently 2 to 3 times inside the remains of a previous ascus, and the wall remnants become retracted (Fig. 36). The species is homothallic. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

w +

-

+ + w

-

+ + +

-

w

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n w + +

-

+ n + +

-

+

-

+ +

-

n

-

n

Additional assimilation tests and other g roi characteristics: Arbutin + Nitrite -

L-Arabinitol + Glucono-5-lactone + D-Galacturonate Urease w 10% NaCl + + 10% MgCl2 0.01% Cycloheximide DBB w Co-Q: Not determined. Mol% G + C: Not determined.

Ethylamine L-Lysine Cadaverine Creatine Creatinine Starch formation Growth at SO^'C

+ + +

-

Origin of the strain studied: CBS 377.68 (ATCC 24275), from larva, West Africa, Batra. Type strain: CBS 377.68.

Fig. 36. A. africana, CBS 377.68. Asci, liberated ascospores and true hyphae with clusters of conidia. Malt extract agar, 22''C, 30 days.

Comments: The species grows poorly in liquid medium and physiological test results were therefore judged with difficulty. The type strain was isolated from a larva infesting Chlorophora excelsa wood from West Africa, imported into Germany. The species is probably an ambrosia fungus disseminated by insect vectors. 19.2. Ascoidea corymbosa W. Gams & Grinbergs (1970) Growth on 4% malt extract agar: After 10 days at 20-22°C, colonies are cream colored, smooth, slimy, and with or without expanding submerged mycelium. Hyphae are 4-5 |im wide with lateral branches, 2.53.5 fxm wide, bearing whorls of sessile blastoconidia in short, branched, acropetal chains just below the septa. Conidia are ellipsoidal, (2.5-3.5)x(4-8) jim. Budding is mostly absent. Formation of ascospores: Asci are formed in small groups in distal portions of hyphae. They are mostly ellipsoidal, (10-14)x(20-40)|im, with firm walls and contain 16^0 ascospores which are liberated by apical deterioration of the ascus. Ascospores are hat-shaped, (3.0-3.5) |im in diameter, and cohere in dense slimy balls after liberation. New asci are formed percurrently 2 to 3 times inside the remains of a previous ascus; the wall

138

Vb. Descriptions of teleomorphic ascomycetous genera and species

remnants are extended or retracted (Fig. 37). The species is homothallic. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

w + + + w

_ V

-

+

-

+ + V

-

+ w

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n w + +

-

Additional assimilation tests and other growth characteristics: Arbutin + L-Arabinitol V Glucono-6-lactone w D-Galacturonate Urease 10% NaCl 10% MgCl2 w 0.01% Cycloheximide DBB Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Ethylamine L-Lysine Cadaverine Creatine Creatinine Starch formation Growth at 30"C

n

-

+ + w

-

n + n

Origin of the strains studied: CBS 457.69 (ATCC 24275) and three additional strains, all from decaying wood of Araucaria araucana, Chile, Grinbergs. Type strain: CBS 457.69. Comments: The species has only been isolated from rotten Araucaria wood in Chile. Cultures show a remarkable dimorphism. Some strains formed a large zone with submerged, expanding hyphae while others mainly consisted of more typical, restricted, slimy microcolonies. Hyphal strains show little growth in submersion and physiological test results were therefore not presented. The species was synonymized with^. africana by von Arx and Miiller (1984) but differs by smaller ascospores and by physiological characters listed in Table 17. 19.3. Ascoidea hylecoeti Batra & FranckeGrosmann (1961) Growth on 4% malt extract agar: After 10 days at 20-22°C, colonies are cream colored, restricted (4 mm diameter), and slimy or expanding (15 mm) and thinly floccose. Slimy colonies consist of budding cells and fragile pseudomycelium bearing conidia in groups on large, butt-shaped denticles. Dry colonies are comprised of sparingly septate hyphae which are up to 8 |im wide and often have irregular protrusions.

Fig. 37. A. corymbosa, CBS 177.70. Asci, in part deteriorating apically, with new asci arising through retracted remains of the previous ascus. Liberated ascospores and true hyphae with clusters of conidia. Malt extract agar, 22''C, 3 weeks.

Formation of ascospores (Batra and Francke-Grosmann 1961): Asci are borne terminally on erect hyphae later becoming lateral due to further growth of supporting hypha; asci are formed in percurrent succession and are obclavate, (15-24)x(l60^00) |im, apex 3^.5 |Lim wide, base 12-18 |im wide, and contain 150—400 ascospores. Asci open by terminal deterioration and liberate a cirrhus of ascospores (Fig. 38). Ascospores are ellipsoidal, (1.5-2.0)x(2.5-3.2)|im and appear hat-shaped due to a unilateral mucilaginous fringe. Fermentation: absent.

19. Ascoidea Brefeld & Lindau / G.S. de Hoog

139

Origin of the strain studied: CBS 355.80, from oak wood infested with a bark beetle (Hylecoetus dermestoides), Sweden, Francke-Grosmann. Type strain: CBS 355.80. Comments: The authentic strain no longer produced ascospores. It showed a remarkable dimorphism with subcultures easily segregating into restricted, purely yeastlike and expanding, hyphal colonies. Due to this dimorphism, physiological test results were often difficult to judge.

19.4. Ascoidea rubescens Brefeld (Brefeld & Lindau 1891) Growth on 4% malt extract agar: After 10 days at 20-22°C, colonies are cream colored, glassy, thin, flat and expanding with a fimbriate margin. Budding cells are absent. Hyphae are 12-22 |im wide, thick-walled, branched at acute angles and produce ellipsoidal conidia singly or in sympodial order from terminal cells. Conidia are ellipsoidal with a truncate base, sessile, subhyaline, (15-20)x(23-38)^im. Fig. 38. A. hylecoeti, CBS 355.80. Asci, in part being produced through remains of a previous ascus; ascospores (from Batra and FranckeFormation of ascospores: Asci are single, formed Grosmann 1961); true, non-sporulating hyphae, pseudomycelial budding terminally on hyphae or lateral branchlets and are clavate, state.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics: Arbutin + L-Arabinitol + D-Galacturonate Urease 5% NaCl + 10% NaCl 10% MgCl2 + 0.01% Cycloheximide DBB Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Ethylamine L-Lysine Cadaverine Creatine Creatinine Starch formation Growth at 30T Growth at 37"C

n w + + w n w + + w

_

w n

_ n

growth owtl1

-

+ + +

-

+

-

(25-30)x(100-150)|im, with thick walls. They contain 16-160 ascospores which are liberated by apical rupture of the ascus. Ascospores are ellipsoidal with a unilateral, gelatinous brim, (5-9)x(7-10)jJim and cohere in slimy heads after liberation. New asci are formed percurrently 2 to 3 times inside the remains of a previous ascus; ascus remains are not retracted (Fig. 39). The species is homothallic. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w

-

+ + + + + w + w w + +

-

+ + +

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ w + + n + w w

-

w n

-

n

140

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics: Arbutin Nitrite w L-Arabinitol w D-Galacturonate Urease 5% NaCl 10% NaCl 5% MgCl2 0.01% Cycloheximide DBB Co-Q: Not determined. MoI% G + C: Not determined.

Ethylamine L-Lysine Cadaverine Creatine Creatinine Starch formation Growth at 30T Growth at 37°C

+ + +

-

+

-

Origin of the strains studied: CBS 116.35, Fitzpatrick; CBS 111.48, from tree, Varitchak, Yugoslavia. Type strain: A living ex-type culture is not available. Comments: Extensive descriptions and illustrations of the species were given by Walker (1931) and Batra (1978). All cells of the thallus, including conidia, are multinucleate, with the exception of ascospores, which are uninucleate (Walker 1935). Ascogenesis was described and illustrated by Popta (1899). The species is easily recognized by its conidial dimensions and by conidia being non-catenate and lacking budding cells. A. rubescens grows very poorly in submersion, which hampered interpretation of physiological test results. Comments on the genus Ascoidea species live in close association with bark Fig. 39. A. rubescens, CBS 111.48. Asci, opening at the apex and beetles, in slimefluxesof trees or behind bark. All species liberating ascospores. True hyphae with sympodial conidia; liberated appear primarily disseminated by insect vectors (Batra conidia with truncate bases. Malt extract agar, 22°C, 2 months. 1963b). Hyphal septa are perforated by micropores (von Arx and van der Walt 1986). No specimen of ^. asiatica Batra & Francke-Grosmann Ascoidea saprolegnioides Holtermann (1898) is not (1964) was available for study; live cultures of this known in culture. It would differ from the remaining species may be lost (L.R. Batra, personal communication). Ascoidea species in having spherical ascospores.

20. Babjevia van der Walt & M.Th. Smith /M.Th. Smith

141

20, Babjevia van der Walt & M.Th. Smith M.Th. Smith Diagnosis of the genus Asexual reproduction is by multilateral budding, mainly on a broad base. The cells are spherical, ovoidal, or occasionally elongated. Short, septate hyphae may be formed. Septa have a single, open, central pore. Cultures grow slowly. Asci are saccate, attached to another cell, and produce one to many spores. Ascospores are hyaline, spherical to ovoidal, smooth and with a single layered wall. Sugars are not fermented. Imidazole is utilized as source of nitrogen, but not nitrate. Diazonium blue B reaction is negative. Type species Babjevia anomala (Bab'eva & Gorin) van der Walt & M.Th. Smith Species accepted 1. Babjevia anomala (Bab'eva & Gorin) van der Walt & M.Th. Smith (1995) Systematic discussion of the species 20.1. Babjevia anomala (Bab'eva & Gorin) van der Walt & M.Th. Smith (Smith et al. 1995b)

Synonym: Lipomyces anomalus Bab'eva & Gorin (1975).

Grow^th in malt extract: Growth is very slow. After 10 days at 20°C, the cells are spheroidal or ovoidal, (4.3-7.0)X(5.4-9.0) |Jim. A rudimentary pseudomycelium is formed. After 1 month at 20°, a small amount of sediment is present. Growth on malt agar: Growth is slow and becomes visible only after one week at 20°C. After 10 days at 18°C, vegetative reproduction is mainly by budding on a broad base and the cells occur mostly as pseudohyphae. The cells are spheroidal or ovoidal, (4.5-7.0)x(5.3-9.0) fxm and occasionally elongated, (4.0-10.0)x (8.0-18.0) (im. Capsules are not formed. Young cells usually contain one large vacuole and several small dark granules. After one month at 20°C, the streak culture is cream-colored, mat, and corrugated. Large spheroidal or ovoidal cells with many buds are common. Dalmau plate cultures on potato agar: A simple pseudomycelium consisting of rows of cells formed by bud-fission is abundantly formed (Fig. 40). Formation of ascospores: In the original description the generative life-cycle is described as follows. The species is homothallic. Asci are usually formed by conjugation of two buds on the same cell or on different cells. The conjugating buds are always separated from the parent cells by septa. This process closely resembles gametogangiogamy. After conjugation, the larger bud may separate from the parent cell. Several sac-like asci may be formed on the same cell (Fig. 40). Sometimes ascospores are formed within pseudomycelial cells or in cells with a great number of buds. The number of spores per ascus varies from 4 to 30 or more. The three strains investigated produced 1 ^ ascospores; these are spheroidal, rarely

ovoidal, and with one or two small droplets. The surface of the spores is smooth. Ascosporulation was observed after 1-2 months incubation on diluted (1/10 or 1/20) V8 or YM agars at low temperatures (12-17^C). Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V

V

+

-

+

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

V

V

V

-

Additional assimilation tests and other growth characteristics: Growth at 25° Galactonate + + Growth at 30° 0.1% Cycloheximide -

Starch formation w Co-Q: 9 (Yamada et al. 1986c, Billon-Grand 1987) Mol% G + C: 43.8, CBS 6740 (BD: Phaff and Holzschu, in Phaff and Kurtzman 1984); 41.7^4.9, 3 strains {T^\ Smith, unpubhshed)

Origin of the strains studied: CBS 6740 (ATCC 32435; NRRL Y-7931; VKM Y-1969), type strain, podzolic soil, Armenia, LP. Bab'eva; CBS 7606 (VKM Y-2716), VI. Golubev; CBS 7607 (KBP-2593), USSR, I. Chernov.

142

Vb. Descriptions of teleomorphic ascomycetous genera and species

Comments on the genus

Fig. 40. B. anomala. Budding cells, pseudohyphae and a cell with multispored asci. (After Bab'eva and Gorin 1975; from Phaff and Kurtzman 1984).

Type strain: CBS 6740, isolated by Bab'eva and Gorin (1975).

During a study of yeasts associated with podzolic soils of the northern Taiga zone, Bab'eva and Gorin (1975) recovered strains which formed multispored, saccate asci borne on other cells. Regarding these isolates as representatives of the genus Lipomyces, they assigned them to a new taxon, L. anomalus, based on differences with the type species L. starkeyi. Major characteristics of L. anomalus included formation of non-encapsulated cells, pseudohyphal cell aggregates, pulvinate colonies on solid substrates, lower optimal growth temperature and utilization of relatively few carbon sources. Kurtzman and Liu (1990) and Yamada and Nogawa (1990b) compared partial sequences of large and small subunit rRNAs from species of Lipomyces and concluded that L. anomalus represented a divergent member of Lipomyces. Based on these analyses and reexamination of the fine structure of septa and ascosporal walls, Smith et al. (1995b) transferred L. anomalus to the new genus Babjeuia.

143

21. Cephaloascus Hanawa / G.S. de Hoog and C.P. Kurtzman

21. Cephaloascus Hanawa G.S. de Hoog and C.P. Kurtzman Diagnosis of the genus Colonies are smooth or farinose, and white to pale cream-colored. Budding cells may be present; pseudomycelium and true hyphae are prevalent. Conidia are formed sympodially on large denticles, in short chains; ultimate conidia are clavate. Ascophores are erect, hyaline or locally brown, and bear a cluster of asci at their apex. Asci arise in short, branched chains, ellipsoidal, thin-walled, and open by apical deterioration; asci mostly contain 4 hat-shaped ascospores. Sugars may be weakly fermented. Nitrate is not assimilated. Diazonium blue B reaction is negative. Type species Cephaloascus fragrans Hanawa Species accepted 1. Cephaloascus albidus Kurtzman (1977) 2. Cephaloascus fragrans Hanawa (1920) Key to species See Table 18. 1.

a Melibiose assimilated; ascophores without metulae, bearing branched chains of asci b Melibiose not assimilated; ascophores bearing whorls of metulae with asci

. C. albidus: C. fragrans:

p. 143 p. 144

Table 18 Key characters of species in the genus Cephaloascus Species

Cephaloascus albidus C. fragrans

Assimilation

Mating system

Glucose fermentation

Melibiose

Raflfinose

Salicin

w

+

+

+

Systematic discussion of the species 21.1. Cephaloascus albidus Kurtzman (1977) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies attain 10 mm diameter, are slimy, hyaline at the center, with a soft texture. The teleomorph is formed in the dry, farinose, snow-white expanding zone. Margins are straight. Hyphae are 2-3 jim wide, hyaline, profusely branched, and bear apical clusters of conidia which are sessile or on marked denticles; the conidial apparatus easily falls apart into separate cells. Conidia are ellipsoidal to clavate, (1.5-2.5)x(3-5)|im. Growth on the surface of assimilation media: A heavy, dry pellicle is formed. Formation of ascospores: Ascophores are erect, stout, hyaline, smooth and firm-walled, (5-7) ^im wide, slightly tapering towards the tip, and up to 200 |im high. Asci are formed in short chains in a terminal cluster on the ascophore, are thin-walled, and ellipsoidal, (2.5-3.0)x(57)|im; occasionally they are formed on undifferentiated hyphae. Asci mostly contain 4 ascospores which are hat-shaped, (1.5-2.0)x(2.5-3.0)[xm; asci open by apical deterioration (Fig. 41). The species is heterothallic.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Heterothallic Homothallic

w w

Lactose Raffinose Trehalose

+ + +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+/w +

-

+ +

-

+ + V

-

-

+

-

+ +

-

+

-

+ +

-

+

-

w + +/w

-

144

Vb. Descriptions of teleomorphic ascomycetous genera and species

raffinose, these strains were probably C fragrans, which is known as a common inhabitant of pine wood. Cephaloascus albidus has septa with a central micropore. This is in contrast to C fragrans, which has a simple pore without Woronin bodies but with numerous electrondense circular bodies (Kurtzman 1977). 21.2. Cephaloascus fragrans Hanawa (1920) Synonyms: Ascocybe grouesii Wells (1954) Aureomyces mirabilis Ruokola & Salonen (1970)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies attain 10 mm diameter, are slimy, pale cream-colored, dry and become pale brown due to production of the teleomorph. Cultures with the teleomorph often exude a brown pigment into the medium. The margin is straight. Hyphae are 1-2 jim wide, hyaline, profiasely branched, and apically bear clusters of conidia which are sessile or on marked denticles; the conidial apparatus easily falls apart into separate cells. Conidia are ellipsoidal, (1.5-2.5)x(4-6)jim when terminal, or much longer when derived from disarticulating hyphae. Growth on the surface of assimilation media: A dry. climbing pellicle is formed.

Fig. 41. C. albidus. Ascophore apex with branched chains of asci, CBS 390.77x391.77; anamorph composed of branched hyphae, liberated terminal conidia and larger, lower conidia with large denticles, CBS 390.77. 4% Malt extract/0.5% yeast extract agar, 3 weeks.

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate 10% NaCl/5% glucose 5-Keto-D-gluconate Starch formation Saccharate Gelatin liquefaction Cadaverine + Nitrite Creatine Growth at 37°C Creatinine L-Lysine + Co-Q: 9, CBS 389.77 (Yamada et al. 1987b). Mol% G + C: 37.8, CBS 389.77 (BD: Kurtzman, unpublished).

Origin of the strain studied: CBS 389.77 (NRRL Y7343), from cranberry pumace, Canada. Complementary mating types: CBS 390.77 (NRRL Y-7343-2) and 391.77 (NRRL Y-7343-6), obtained as single-ascospore isolates from the diploid type strain. Type strain: CBS 389.77, from cranberry pumace. Comments: The species was described in detail by Kurtzman (1977). Wang and Zabel (1990) described several strains from treated pine poles, which were identified as C. albidus on the basis of hyaline conidiophores. However, the difference in pigmentation of ascophores in the two species is unreliable as a specific criterion (Batra 1963 c). Judging from the absence of growth with

Formation of ascospores: Ascophores are erect, stout, thick-walled, often become rough-walled and golden brown in the apical part, about 8|im wide at the base, tapering to (4-6) |im just below the slightly swollen apex, and up to 500 [im high. Asci are formed in short chains on metulae at the apex of ascophores, thin-walled, ellipsoidal, (3-4) X (5-7) Jim, and open by deterioration at the tip (Fig. 42). Asci contain 2-4 ascospores which are hatshaped, (1.8-2.5)X (2-3) |im. The species is homothallic. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

V

V

+ +

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V

-

+ +

-

+

-

+ +

-

w/+/w +/w

-

+

21. Cephaloascus Hanawa / G.S. de Hoog and C.P. Kurtzman

145

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Ethylamine + 5-Keto-D-gluconate 10% NaCl/5% glucose w/Saccharate Starch formation Cadaverine + Gelatin liquefaction Creatine Nitrite Creatinine Growth at 2>TC L-Lysine + Co-Q: 9, CBS 121.29 and 5 additional strains (Yamada et al. 1987b). MoI% G + C: 39.9, CBS 121.29 (BD: Kurtzman, unpublished).

Origin of the strains studied: CBS 121.29 (ATCC 36174, NRRL Y-6742), from human ear, Hanawa; CBS 150.61 (ATCC 12091, DAOM 33766), type strain of Ascocybe grovesii, from pine {Pinus sp.) wood, Wells, Canada; CBS 183.71 (ATCC 22396), type strain of Aureomyces mirabilis, from pine {Pinus sp.) wood, Ruokola, Finland; from pine {Pinus sp.) wood (1); from oak {Quercus sp.) wood (1). Type strain: CBS 121.29, from a human ear. Comments: The species was originally isolated from a human ear, but its prevalent ecological niche seems to be pine or oak wood in association with bark insects. An extended description of the species was given by Schippers-Lammertse and Heyting (1962). The teleomorph is abundantly produced on nutritionally poor media. Cultures with teleomorphs often exude a brown, water-soluble pigment into the medium. The pigment was produced by nearly all strains in growth tests with ethylamine, lysine and cadaverine, but remained absent with most carbon compounds tested. Kurtzman (1977) found the species to have simple septal pores without Woronin bodies but with numerous, electron-dense circular bodies. The species is diploid

Fig. 42. C. fragrans. Ascophores with sterile metulae bearing chains of asci which deteriorate at the distal end, CBS 150.61, 5% malt extract agar, 25°C, 1 week; hyphae with conidia, CBS 121.29.

(Wilson 1961). The cell walls are rich in mannose, while cellulose and rhamnose are absent (Weijman 1976).

146

Vb. Descriptions of teleomorphic ascomycetous genera and species

22. Citeromyces Santa Maria C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal to ellipsoidal. Neither pseudohyphae nor true hyphae are produced. Asci are persistent and contain one or, infrequently, two roughened spheroidal ascospores. Asci arise from diploid cells or from conjugation between complementary mating types. Sugars are fermented. Nitrate is assimilated. Coenzyme Q-8 is present. Diazonium blue B reaction is negative. Type species Citeromyces matritensis (Santa Maria) Santa Maria Species accepted 1. Citeromyces matritensis (Santa Maria) Santa Maria (1957) Systematic discussion of the species 22.1. Citeromyces matritensis (Santa Maria) Santa Maria (1957) Anamorph: Candida globosa Yarrow & S.A. Meyer Synonyms: Hansenula matritensis Santa Maria (1956a) Torula globosa Olson & Hammer (1935) nom. nud. Torulopsis globosa (Olson & Hammer) Lodder & Kreger-van Rij (1952) nom. nud. Candida globosa Yarrow & S.A. Meyer (1978)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal (3.09.5)x(4.0-10.5)|im, occur as singles, pairs, or in threes, and may have one or two buds. Growth is butyrous and white to faintly tannish-white. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass lacks pseudohyphae or true hyphae. Aerobic growth is butyrous, cream colored and slightly glistening with fine striations and a tannish, depressed center. Colony margins are entire or finely lobed. Formation of ascospores: Many natural isolates are diploid and the vegetative cells convert directly into asci. Asci have thick persistent walls and contain one or, infrequently, two spheroidal ascospores with a roughened wall and a prominent lipid droplet (Fig. 43). Sporulation is usually abundant on YM agar, and well-sporulated cultures turn red to brown. Wickerham (1958) demonstrated C. matritensis to be heterothallic by heat treatment of a sporogenous culture of the type strain. In addition, he showed that the type strain of Candida (Torulopsis) globosa (NRRL Y-1506, CBS 162) conjugated with one of the mating types (NRRL Y-2407-9), but apparently represents a unisexual diploid form of this species because it also sporulated alone on media with high sugar concentrations. Complementary mating types show a strong sexual agglutination reaction if grown in liquid medium rather than on an agar medium (Wickerham 1958).

Ascospores were observed on YM-, malt extract- and V8 agars after 10 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+/w

Lactose Raffinose Trehalose

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

w w/-

V

+

-

+ + +

-

+

-

+

V

V

V

-

+/w +/w

V

-

+ + +

-

+ w/-

V

-

+ +/w

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation + 5-Keto-D-gluconate Gelatin liquefaction + Growth at 37T Saccharate -

10% NaCl/5% glucose + Co-Q: 8 (Yamada et al. 1973a). Mol%G + C: 45.5, 45.2, CBS 2764 {T^: Nakase and Komagata 1968a; BD: C.R Kurtzman, unpublished).

Origin of the strains studied: NRRL Y-2407 (CBS 2764), fermenting fruit in syrup, J. Santa Maria, Spain (1); sugar, J. Santa Maria, Spain (1); condensed milk from the Netherlands (1), Spain (1); NRRL Y-1506 (CBS 162), type strain of Candida (Torulopsis) globosa, from condensed milk, U.S.A.; flux from sandalwood (Myoporum sandwicense), Hawaii, U.S.A. (5).

22. Citeromyces Santa Maria / C.P. Kurtzman

147

Type strain: CBS 2764 (NRRL Y-2407) received from J. Santa Maria as the type strain of Hansenula matritensis. This strain was isolated from fruit preserved in syrup.

O « Fig. 43. C matritensis, CBS 2764. Asci with ascospores, after 10 days, YM agar, 25°C. Bar = 5|im.

Complementary mating types: NRRL Y-2407-9 (CBS 7103) and NRRL Y-2407-10 (CBS 7104), isolated following heat treatment of the diploid type strain.

Comments on the genus Citeromyces is unusual among taxa that form rugose spheroidal ascospores because it is characterized by coenzyme Q-8. Whether Citeromyces represents a unique phylogenetic line is unknown and, consequently, knowledge of its position among the yeasts must await ftiture molecular comparisons. Original isolates of C matritensis were from foods with high sugar content. More recently, the occurrence of this species has been documented in nature with repeated isolations from fluxes of the sandalwood tree (H.J. Phaff and W.T. Starmer, personal communication).

Vb. Descriptions of teleomorphic ascomycetous genera and species

148

23. Clavispora Rodrigues de Miranda M.A. Lachance and H.J. Phaff Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are ovoid, ellipsoidal or elongate. Pseudomycelium may be formed, but true mycelium is not formed. Conjugation of haploid cells of opposite mating types precedes ascus formation. The ascospores are clavate, sometimes containing a small oil droplet; one or two (rarely three or four) ascospores are formed per ascus. The spore wall may have small warts visible by electron microscopy. The spores are easily liberated from the ascus. Glucose is fermented. Nitrate is not assimilated. Coenzyme Q-8. Diazonium blue B reaction is negative. Type species Clavispora lusitaniae Rodrigues de Miranda Species accepted 1. Clavispora lusitaniae Rodrigues de Miranda (1979) 2. Clavispora opuntiae Phaff, Miranda, Starmer, Tredick & Barker (1986) Key to species See Table 19. 1.

a L-Rhamnose or L-lysine assimilated, growth in the presence of cycloheximide lOmg/1 b L-Rhamnose and L-lysine not assimilated, no growth in the presence of cycloheximide lOmg/1

C. lusitaniae: p. 148 . C opuntiae: p. 150

Table 19 Key characters of species in the genus Clavispora Assimilation

Species

Clavispora lusitaniae

Cycloheximide lOmg/1

L-Rhamnose

Hexadecane

V

w/-

+

+

w/-

C. opuntiae

L-Lysine^ +/w

As sole nitrogen source.

Systematic discussion of the species 23.1. Clavispora lusitaniae Rodrigues de Miranda (1979) Anamorph: Candida lusitaniae van Uden & do Carmo-Sousa Synonyms: Candida lusitaniae van Uden & do Carmo-Sousa (1959) Candida parapsilosis (Ashford) Langeron & Talice var. obtusa Dietrichson (1954) nom. nud. Candida obtusa (Dietrichson) van Uden & do Carmo-Sousa ex van Uden & H.R. Buckley (1970) Saccharomyces carmosousae Montrocher (1967)

Growth on YM agar: After 3 days at 25°C, the cells are subglobose, ovoidal, to elongate, (2-6)x(3-10)jim, single, in pairs or in short chains. Growth is butyrous, white to cream colored, glistening or occasionally dull and rugose. Growth in glucose-yeast extract broth: A sediment is normally formed after 2 weeks at 25°C. Occasionally growth may be flocculent. Dalmau plate culture on corn meal agar: After

one week at 25°C, pseudomycelium is abundant and well developed. Colonies may be fringed with pseudohyphae. Formation of ascospores: Asci are bilobate, containing usually one or two (rarely three or four) clavate ascospores (Fig. 44). Warts may (Rodrigues de Miranda 1984a) or may not (Rodrigues de Miranda 1979) be visible by electron microscopy. The ascospores are liberated from the asci soon after their formation. On rare occasions, spherical ascospores are formed. Abundant sporulation occurs 2-A days at 17-25°C after mixing cultures of compatible mating types on 1% malt extract agar. Nearly all isolates are fertile. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

23. Clavispora Rodrigues de Miranda / M.A. Lachance and H.J. Phaff

149

Fig. 44. C. lusitaniae, CBS 4413 x CBS 6936. Conjugating cells and asci after 4 days on 1% malt extract agar, 25°C. Bar = 5 |im.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + +

-

+

-

+

V

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi"ee

+

-

+ +

s

-

+ + V

+ s +/w + V

-

w/-

UWO(PS)83-1068.1 and UWO(PS)83-1080.1, from decaying fruit of prickly pear (Opuntia striata Haworth) and UWO(PS)83-1156.2, from fly (Drosophila bromeliae Sturtevant) collected on morning glory (Ipomoea L. sp.). Cayman Islands; UWO(PS)85-286.1,fromfly(Drosophila carbonaria Patterson & Wheeler) collected on mesquite [Prosopis juliflora Swartz (DC)], Arizona, U.S.A. and UWO(PS)WN9-8 and UWO(PS)WN9-20, from effluents of chocolate factory, Ontario, Canada. Complementary mating types: CBS 6936 (/?+) and CBS 4413 (h-). Type strain: CBS 6936, isolated by Mateles from citrus peel juice; strain CBS 4413, isolated by van Uden from a pig is the isotype.

Comments: It was initially thought (Rodrigues de Miranda 1984a; Lachance et al. 1986) that C. lusitaniae consistently assimilates L-rhamnose, suggesting that this response could serve as a diagnostic species 2-Keto-D-gluconate +/w + Cycloheximide lOmg/1 character. Some strains examined more recently, CBS Ethylamine.HCL + Gelatin liquefaction 7270 and SU(B)86-287, failed to utilize L-rhamnose, but L-Lysine + Growth at 37T + their identity was ascertained by mating experiments. Glucose 50% s/w An imperfect positive correlation was found between Co-Q: 8 (Yamada and Kondo 1973). Mol% G + C: 45.1^5.7, 5 strains, including CBS 4413 and CBS 6936 L-rhamnose utilization and that of citric acid in this case. (BD: Lachance et al. 1986). In a study of 13 clinical isolates, Gargeya et al. (1990) Origin of the strains studied: CBS 1944, clinical found two strains that neither utilized L-rhamnose nor specimen, Dietrichson, Norway, type strain of Candida exhibited mating reactions. DNA reassociation, however, obtusa; CBS 4413, type strain of Candida lusitaniae, and demonstrated a high degree of genetic relatedness between CBS 4415, from pig digestive tract, van Uden, Portugal; these variants and authentic C lusitaniae strains. Also, CBS 6936, from peel juice of Citrus, Mateles, Israel; one of their mating strains failed to utilize maltose. CBS 7270, received by CBS as Candida kruisii, clinical Rodrigues de Miranda (1984a) reported that C lusitaniae specimen, Woodgyer, New Zealand. SU(B)79-257.1, from exhibits vitamin independence. None of the strains trunk rot of boojum tree (Idria columnaris Kellogg), and we have examined grew on vitamin-free medium. The SU(B)79-267.12 and SU(B)86-460.5, from stem rot of 11 strains studied by van Uden and Buckley (1970) and agria cactus, [Stenocereus gummosus (Engelmann) Gibson the 10 strains examined by Barnett et al. (1983) required & Horak], Baja California N.; SU(B)80-29, from leaf biotin, pyridoxine, and thiamin for growth. Mating compatibility among strains of C lusitaniae rot oi Agave L. sp., Arizona; SU(B)86-287, from rotting tissue of cactus, [Cephalocereus russelianus, (Otto) Rose], generally follows a pattern clearly consistent with a Venezuela; SU(B)86-780.2, from stem rot of cactus single-locus, biallelic system. The holotype (CBS 6936) [Cephalocereus hoppenstedtii (Weber) K. Schum.] Mex- has been arbitrarily designated h'^, and the isotype ico; SU(B)86-968.1, from cladode rot of prickly pear [Op- (CBS 4413), h- (Lachance et al. 1986). According untia ficus-indica (L.) Miller] Florida, U.S.A., Starmer; to Gargeya et al. (1990), h^ corresponds to the desUCD-FST 81-467C, from cladode rot of prickly pear, ignation a used by other authors (and accordingly (Opuntia phaeacantha Engelmann), Arizona, U.S.A.; h~ corresponds to a), although the initial assignment Additional assimilation tests and other g;rowf characteristics: V

150

Vb. Descriptions of teleomorphic ascomycetous genera and species

of mating types is not clear due to a typographical error in Rodrigues de Miranda's (1979) original description. Strains CBS 1944, CBS 7270, SU(B)79257.1, SU(B)80-29, and UWO(PS)WN9-8 are of mating type h^, while CBS 4415, SU(B)79-267.12, SU(B)86460.5, SU(B)86-287, SU(B)86-780.2, SU(B)86-968.1, UCD-FST 81-467C, UWO(PS)83-1068.1, UWO(PS)83-1080.1, UWO(PS)83-1156.2, UWO(PS)85-286.1, and UWO(PS)WN9-20 are of mating type h'. The ecological niche of C lusitaniae is ill-defined. The yeast is recovered quite frequently in clinical specimens, but is not regarded as a true human pathogen (Hurley et al. 1987). It was first recognized as an opportunistic infectious organism by Holzschu et al. (1979), and has since turned up in over a hundred specimens from patients suffering from immune deficiencies (Gargeya et al. 1990). A study of 35 clinical isolates (Merz et al. 1992) revealed that a significant amount of genetic variation occurs from clone to clone. These could be assigned, on the basis of their electrokaryotypes, to 15 groups corresponding to the 15 patients from which they had been isolated. Although C lusitaniae occurs in cactus, it cannot be considered cactophilic, having been reported only 10 times in nearly two thousand samples (Starmer et al. 1990). Its ability to grow at elevated temperatures combined with its recovery in several samples from warm-blooded animals (van Uden and Buckley 1970) may provide clues on the nature of its natural habitat, but alternatively may reflect the greater intensity of research efforts in that area in the past. 23.2. Clavispora opuntiae Phaff, Miranda, Starmer, Tredick & Barker (1986) Synonym: Lodderomyces opuntiae Starmer (1981) nom. nud.

Growth on YM agar: After 3 days at 25°C, the cells are subglobose, ovoidal to elongate (2-5)x(3-16)(im, single, in pairs or in short chains. Growth is butyrous, white to cream colored and glistening. A characteristic fringe of submerged pseudomycelium is formed. After storage on YM agar slants covered with mineral oil for several months, growth on YM agar may take the form of rugose, convoluted colonies. Growth in glucose-yeast extract broth: A sediment is normally formed after 2 weeks at 25°C. After storage on YM agar slants covered with mineral oil for several months, a heavy pellicle may be formed on liquid media after a week. Dalmau plate culture on corn meal agar: After one week at 25''C, pseudomycelium is abundant and well developed. Colonies are fringed with pseudohyphae. Formation of ascospores: Asci are bilobate, containing usually one or two (rarely three or four) clavate ascospores similar to those formed by C lusitaniae (Fig. 44). Warts are visible by electron microscopy only (Phaff et al. 1986). The ascospores are liberated from the asci soon after their formation.

In most strains, abundant sporulation occurs 2-A days at 17-25°C after mixing compatible mating types on 1% malt extract agar. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

Lactose Raffinose Trehalose

+

+ + + + + + s

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+

-

+

-

-

+ s

s

-

+ +

-

+ s + + +

s

w/Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Cycloheximide lOmg/1 Ethylamine.HCL + Gelatin liquefaction -

L-Lysine w/Growth at 2>TC + Glucose 50% Co-Q: 8(Phaffetal. 1986). Mol% G + C: 43.1-44.1, 11 strains}, including UCD-FST 77-279 (CBS 7068) and UCD-FST 78-540A (CBS 7069) (BD: PhafFet al. 1986).

Origin of the strains studied: UCD-FST 77-279 (CBS 7068) and UCD-FST 78-540A (CBS 7069) are among hundreds of strains isolated from various species of prickly pear: in Australia, Opuntia vulgaris Miller (syn. O. monacantha), O. striata Haworth, O. streptacantha Lemaire, O. tomentosa Salm-Dyck; in Venezuela, O. boldinghii Britton & Rose, O. elatior Miller; in Hawaii, O. megacantha Salm-Dyck (syn. O. ficusindica); in Peru, Opuntia (Tournefort) Miller sp.; in Arizona, U.S.A., O. ficus-indica, O. phaeacantha; in Texas, O. lindheimeri Engelmann; in the Bahamas, the Antilles, and the Caribbean, O. moniliformis (L.) Haworth, O. striata [UWO(PS)83-877.1 (ATCC60725)]; in Mexico, O. fiaus-indiaa, O. oriaola Philbrick, O. wilaoxii Britton & Rose, Nopalea Salm-Dyck sp. (syn. Opuntia sp.); in Spain and South Africa, O. ficus-indiaa; in Brazil, O. vulgaris (received from Rosa). Some strains are from columnar cactus species, Stenoaereus alamosensis (Coulter) Gibson & Horak, S. griseus (Hawthorn) Buxbaum, S. hystrix (Hawthorn) Buxbaum, S. pruinosus (Otto) Buxbaum, iS". stellatus (Pfeiffer) Riccobono, Cephaloaereus royenii (Linnaeus) Britton & Rose [UWO(PS)-718.1], C. lanuginosus (L.) Britton & Rose, Myrtillocaatus aoahal (Orcutt) Britton & Rose. A few strains are from cactus flies:

23. Clavispora Rodrigues de Miranda / M.A. Lachance and H.J. Phaff

Drosophila mettleri Heed and D. nigrospiracula Patterson & Wheeler recovered on giant saguaro cactus [Carnegiea gigantea (Engelmann) Britton & Rose], Arizona, U.S.A.; D. mulleri Sturtevant [UWO(PS)83-803.2 (ATCC 60724)] and D. mayaguana Vilela collected on Opuntia L. spp., Caribbean. Several strains were recovered from the prickly pear moth, Cactoblastis cactorum Berg. Some strains (received from Rosa) were recovered from feeding sites of the moth Sigelgaita (Heirich) sp. in Pilosocereus arrabidae (Lem.) Byles et Rowl. in Brazil. Strain UWO(PS)85-351.1 is from the exudate of an oak {Quercus emoryi Torr.) growing in the vicinity of cacti in Arizona. Complementary mating types: CBS 7068 (/?+) and CBS 7069 (/?-). Type strain: CBS 7068; strain CBS 7069 is the isotype. Both are prickly pear isolates from Australia. Comments: C opuntiae was described (Phaff et al. 1986) to accommodate isolates consistently recovered from prickly pear (Opuntia L. spp.), and less frequently from other cacti. Although C opuntiae occurs in decaying cactus fruit as well as somatic tissue, its host specificity is remarkable, in view of its worldwide distribution. Found in 10% of all prickly pear samples ever collected (Lachance et al. 1988), C opuntiae accounts for 5% of the yeasts isolated from prickly pears and 2% or less of isolates from other cactus species (Starmer et al. 1990). Many vectors (e.g., Drosophila spp.) are likely to contribute significantly to the yeast's distribution, but the prickly pear moth, Cactoblastis cactorum Berg, is thought to play a major role in confining C. opuntiae mostly to Opuntia spp., as the occurrence of the moth coincides to some extent with the abundance of the yeast (Starmer et al. 1988a). DNA fingerprinting (Lachance 1990a) indicated that cacti may bear, in their C opuntiae biota, a genetically diverse resident component as well as a more homogeneous population associated with C cactorum. Rosa et al. (1992), working in the region of Rio de Janeiro, Brazil, reported that C opuntiae occurs there less abundantly in Opuntia species than in the columnar cactus Pilosocereus arrabidae (Lem.) Byles & Rowl., where the yeast appears to exist in association with the moth Sigelgaita (Heirich) sp. Mating compatibility in C. opuntiae is typically a single-locus, biallelic system. The holotype (CBS 7068) is designated h^, and the isotype (CBS 7069), hr (Phaff et al. 1986). Considerable inequalities are observed in the distribution of mating types within local populations (Lachance 1990a). An h^\hr ratio greater than 30:1 is observed among Australian isolates (Phaff et al. 1986), with the nearly exact reverse in strains collected on the Bahamian Island of Great Inagua (M.A. Lachance, H.J. Phaff and W.T. Starmer, unpublished data). Brazilian isolates exhibited a 20:1 mating type ratio (Rosa et al. 1992). Even more extreme disparities are known to exist on islands of the Hawaiian archipelago (M.A. Lachance and W.T. Starmer, unpublished data).

151

Although some strains of C. opuntiae may exhibit delayed reactions for the assimilation of trehalose and a few other carbon compounds, variation is rather minimal in this species. The exception is strain UWO(PS)83-718.1 (Lachance et al. 1986), which differs from others by its very weak growth on 2-keto-D-gluconate and its higher sensitivity to inhibition by saponins of the agria cactus, Stenocereus gummosus (Englemann) Gibson & Horak. These differences are paralleled by the fact that this is the only strain of C. opuntiae ever recovered from Cephalocereus royenii (L.) Britton & Rose, even though nearly 100 plants of that cactus have been sampled (Starmer et al. 1990). Matings between strain UWO(PS)83-718.1 Qf) and several h^ strains invariably lead to very low meiotic recombination (P. Lo and M.A. Lachance, unpublished data). In addition, the large subunit rDNA coding region of that strain contains a unique restriction site not found in the rest of the species (Lachance 1990a). While it would be premature to describe a variety on the basis of a single strain, the anticipated recovery of additional strains from Cephalocereus royenii or from hosts sympatric to that cactus is expected to provide insight on trans-specific evolution in this yeast species. C opuntiae is capable of ethanol production from D-xylose under aerobic conditions (Nigam et al. 1985). Of 11 strains studied, UWO(PS)83-803.2 (ATCC60724) and UWO(PS)83-877.1 (ATCC60725) had the highest yields of 34 and 57% of the theoretical value under certain conditions. Comments on the genus Rodrigues de Miranda (1979) described the monotypic genus Clavispora after observing that strains previously assigned to Candida lusitaniae mated with a new strain isolated from Citrus peel juice by Mateles, in Israel, giving rise to clavate ascospores. The type strain of Candida obtusa (CBS 1944) was also found to be compatible. A strain isolated from a mushroom and designated as Candida obtusa var. arabinosa did not show sexual reactions with any of the mating types, and was reassigned to Pichia mississippiensis (Kurtzman et al. 1980a). Prior to the publication of the genus Clavispora by Rodrigues de Miranda (1979), C opuntiae was thought to represent a species of Lodderomyces because of the shape of its ascospores (e.g., Starmer 1981b). The morphological similarity of the new species with C. lusitaniae later became obvious and prompted the description by Phaff et al. (1986). Although the two Clavispora species are barely distinguishable on the basis of physiology and morphology, they are sharply distinct at the genetic level. Without exception, mating is restricted to intraspecific crosses. DNA reassociation and rDNA restriction mapping clearly delineate the two taxa along the same boundaries (Lachance et al. 1986). Ecologically, a small amount of niche overlap is evident, C lusitaniae being recovered on occasion

152

Vb. Descriptions of teleomorphic ascomycetous genera and species

from prickly pear and C opuntiae from columnar cacti. Because of its less diverse habitat, its slightly narrower nutritional range, its shorter rDNA repeat unit (7.6 as opposed to 9.0 kb), and its lower mol% G + C, C opuntiae is viewed as the more evolutionarily derived of the two species. The position of the genus Clavispora relative to other yeast genera is beginning to be clarified. Several other yeasts share DNA base compositions in the mid-40% values. Among those, certain Metschnikowia and Pichia species have physiological profiles that bear a superficial resemblance with those of Clavispora species. Only a few Pichia species share the Co-Q 8 characteristic. The ribosomal RNA sequencing studies of Barns et al. (1991) and Hendricks et al. (1991) together indicate that Clavispora (represented by C lusitaniae) is phylogenetically distinct from Candida albicans and related Candida species.

from Candida guilliermondii, from Issatchenkia species (represented by Candida krusei), from Pichia species (represented by Pichia angusta - syn. Hansenula polymorpha), from the moderately related species Saccharomyces cerevisiae, Kluyveromyces lactis, Torulaspora delbrueckii and Candida glabrata, or from Yarrowia lipolytica. Of all the yeasts compared in the distance matrix presented by Barns et al. (1991), Candida guilliermondii is the nearest neighbor to Clavispora lusitaniae. Candida oleophila exhibits a remarkably high degree of phenetic similarity to C opuntiae, has 42 mol% G + C (Nakase and Komagata 197If), and could eventually be shown to have a sexual life cycle typical of Clavispora. Unlike C opuntiae however, Candida oleophila grows vigorously on glucono-6-lactone, utilizes L-lysine as sole nitrogen source, grows in the presence of lOOmg/1 cycloheximide, and fails to grow at 37°C.

24. Coccidiascus Chatton emend. Lushbaugh, Rowton & McGhee / H.J. Phajf

153

24. Coccidiascus Chatton emend. Lushbaugh, Rowton & McGhee H.J. Phaff Diagnosis of the genus Vegetative cells spheroidal to ovoidal, 5-15 jim in length, with a large vacuole and nucleus. Vegetative reproduction by budding. Mycelium, pseudomycelium, or ballistospores are lacking. Vegetative cells, which are transformed into asci, elongate, forming banana-shaped to crescent-shaped asci arranged within parasitophorous vacuoles of Drosophila intestinal epithelium cells in the manner of coccidian schizonts. Thick-walled asci observed in host tissue range from 13-18 ^im tip to tip. Mature asci contain two relatively thin-walled ascospores, closely intertwined in a helix. Asci from dead flies have been observed to contain up to eight ascospores. Ascospores extruded from asci are spindle-shaped, bilaterallyflattened,without apical cytoplasmic appendages, each with an apical nucleus. Fermentation and assimilation reactions are unknown. Type species Coccidiascus legeri Chatton Species accepted 1. Coccidiascus legeri Chatton (1913) Systematic discussion of the species

in France. He was unable to cultivate it and as far as is known no type material was deposited in a herbarium. 24.1. Coccidiascus legeri Chatton (1913) This species was rediscovered by Lushbaugh et al. (1976) This organism has not been cultured and the description as a parasite within vacuoles of the intestinal epithelium of this species therefore is the same as the generic of Drosophila melanogaster Meigen in the state of description. Georgia, U.S.A. They provided an expanded description Type strain: Neotype material collected in Drosophila of Coccidiascus legeri illustrated by electron micrographs melanogaster intestine from Athens, Georgia, U.S.A., and light microscope photographs of material in situ has been deposited in the New York Botanical Garden (Fig. 45). They also were unable to culture the organism Cryptogamic Herbarium and in the Julian H. Miller and, in the absence of a known holotype or lectotype, they Mycological Herbarium (GAM). designated a neotype which was deposited in the New York Botanical Garden Cryptogamic Herbarium (New Comments on the genus York, U.S.A.). Chatton (1913) observed and named this species, which parasitized the intestinal cells of Drosophila funebris Fabr.

^ ^ .

^

Fig. 45. C. legeri. Transmission electron micrograph of ascospores (A). One of the spores is shown nearly in its entirety, whereas only a portion of the second spore is seen. The ascus wall (CW) is noticeably thickened (from Lushbaugh et al. 1976). Bar = 1 ^m.

154

Vb. Descriptions of teleomorphic ascomycetous genera and species

25. Cyniclomyces van der Walt & D.B. Scott HJ. Phaff and M.W. Miller Diagnosis of the genus Cells are long-ovoidal to cylindrical. In liquid media they occur in branched chains; on solid media they are mainly singles or pairs. Vegetative reproduction is by budding at the poles or on broad shoulders. In liquid media a sediment is formed. Ascospores are ovoidal to cylindrical, one to four per ascus. No conjugation of cells prior to sporulation. Upon germination an exosporium is evident. Fermentation of sugars is weak. Growth occurs only between 30 and 40°C. Amino acids, B-vitamins, and an increased level of CO2 in the gas atmosphere are required for growth. The cells are short-lived at room temperature or above. Diazonium blue B reaction is negative. Type species Cyniclomyces guttulatus (Robin) van der Walt & D.B. Scott Species accepted 1. Cyniclomyces guttulatus (Robin) van der Walt & D.B. Scott (1971) Systematic discussion of the species 25.1. Cyniclomyces guttulatus (Robin) van der Walt & D.B. Scott (1971b) Synonyms: Cryptococcus guttulatus Robin (1853) Saccharomyces guttulatus (Robin) Winter (1884) Saccharomycopsis guttulatus (Robin) Schionning (1903) Atelosaccharomyces guttulatus (Robin) de Beurmann & Gougerot (1909)

granular sediment. No ring or pellicle is formed even after an extended period of incubation. Growth on solid medium: When a plate of yeast autolyzate-Proteose-peptone-glucose agar (pH4.5) is inoculated with cells of C guttulatus, smooth, semiglossy colonies appear after 24 h, provided the plates are incubated in an atmosphere high in CO2 content (optimal concentration 15%). Cells are ovoidal to cylindrical, (4.77.9) X (8.8-19.5) jJim, mainly single or in pairs.

Growth in liquid medium: ( 1 % w/v yeast autolyzate, 1% Proteose peptone, 2% glucose, pH 4.5). After one day at 37°C, cells are long-ovoidal to cylindrical (Fig. 46). Budding occurs polar and at the shoulders of the cells, resulting in branched pseudomycelial formations. Often, the original parent cell appears dead by the time the chain is formed, as judged by complete granulation of its cytoplasm. After 48 h the range of cell dimensions is (4.46.1)x(14-21)|i-m. The cells have a tendency to grow on the glass wall of a tube, about 1 cm below the surface of the liquid. In older cultures the cells form a loose, often

Formation of ascospores: No conjugation immediately preceding ascospore formation; the vegetative cells are presumed to be diploid. Asci contain one to four (rarely more) ovoidal to cylindrical ascospores, (3.6-4.8)x(7.010) [im (Fig. 47), which are lying free in the ascus. This arrangement is quite different from the tightly fitting spores in asci of species of Saccharomyces. Asci rarely deliquesce at maturity. Ascospores germinate directly or after conjugation with another spore. Germination tubes

Fig. 46. C. guttulatus. Two-day old pseudomycelial formation in liquid medium. Bar = 20 |im.

Fig. 47. C. guttulatus. Two-spored asci after 7 days at 18°C on sporulation medium. Bar= 12 |im.

25. Cyniclomyces van der Walt & D.B. Scott / H.J. Phaff and M.W. Miller

155

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Cycloheximide lOfxg/ml 5-Keto-D-gluconate Growth at 2>TC + 5% NaCl/5% glucose Temperature range for growth is 30-37°C in the presence of CO2. Vitamins required for growth are nicotinic acid, pantothenic acid, thiamin, and inositol (Shifrine and PhafiF 1959). Co-Q: 6, Strain UCD-FST 73-90 (Yamada and Phaflf, unpublished results). Mol% G + C: 34.5, Strain UCD-FST 73-90 (BD: Mendonga-Hagler and Phaff 1975).

Fig. 48. C. guttulatus. Germination of a single ascospore. The exosporium is being shed at the base of the spore. Bar= 16 |im.

are formed with simultaneous shedding of an outer spore coat (exosporium) (Fig. 48). Germination is followed by formation of buds. Ascospores are formed only at temperatures lower than the growth temperature, best at about IS^'C, where vegetative growth is not possible. Agar slants of the following composition are a suitable sporulation medium: 0.3% yeast autolyzate, 0.3% malt extract, 0.15%) Bacto-peptone, \% glucose. The slants are inoculated with about 1 ml sedimented cell material grown in a liquid medium. The slants are incubated in a horizontal position for 5-7 days at 18°C. Fermentation:

Glucose Galactose Sucrose Maltose Lactose

w

-

w

-

Raflfinose Trehalose Melibiose Inulin

w,s

Assimilation: Assimilation tests were carried out in Yeast nitrogen base (w/o amino acids and w/o ammonium sulfate) plus 0.1% yeast extract and 0.5%) Proteose-peptone in screwcapped test tubes flushed with CO2 before autoclaving. Control tubes without glucose showed no growth. The tubes were incubated at 37*^0 on a Rollordrum. Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + 1 + w/1/w -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w n n -

Origin of the strain studied: UCD-FST 92-2, a newly isolated strain from a domestic rabbit. Type strain: Phaff (1970b) designated a newly isolated strain from a domestic rabbit as the type (CBS 5913), since no designated type strain existed at that time. Phaff and Miller (1984a) also designated CBS 5913 as the type strain. However, the 1987 CBS catalogue listed CBS 8137, isolated by D. Yarrow from a rabbit, as the only strain available because the original type was no longer viable. Comments on the genus The long history of the genus Cyniclomyces has been reviewed by Phaff (1970b) and by van der Walt and Scott (1971b). Buecher and Phaff (1970) studied the requirements of various gasses for growth in the atmosphere. C. guttulatus grew exponentially at a maximal growth rate under a continuous gas phase of 15% CO2, 2% O2 in nitrogen. The growth rates were almost the same when the oxygen concentration was varied between 0.25 and 20%, but in the absence of oxygen, growth was poor. Buecher and Phaff (1972) also isolated and described an atypical dimorphic, filamentous strain of C guttulatus from a wild jack rabbit. The colonies of this strain were irregular, rough, and dull and the vegetative growth consisted of septate, branched hyphae, radiating from the central origin of growth. New filaments originated by fragmentation of older aggregates. The atypical strain was not CO2 dependent at 37°C but did require oxygen. At 30''C, the lower limit for growth, a morphogenetic change took place from the filamentous form to the yeast form, which was stimulated by anaerobic conditions. The budding form of the filamentous strain was relatively stable in culture; at either 30 or 37°C it was CO2 dependent. Spontaneous reversions from the budding to the filamentous form took place sporadically. Unfortunately this strain has not been preserved. One of the problems of working with C. guttulatus is the high death rate of the cells. The low pH required for the isolation of this yeast causes early granulation and death of the cells. If sufficient CO2 is not present and the inoculum contains low cell numbers, the cells may die before they can grow out and generate their own CO2 in liquid media. This species is therefore difficult to maintain in culture. A lyophilized preparation of a young sporulating culture is recommended for extended storage. Sporulating slants

156

Vb. Descriptions of teleomorphic ascomycetous genera and species

may be stored in a refrigerator for 6-12 months. Vegetative growth on slants of 1% yeast autolyzate, 1% Proteose peptone-2% glucose, pH 5.0 can be stored for about one month in a refrigerator. Reinoculation of preserved material into liquid growth medium at 37°C in a container with elevated CO2 atmosphere results in good growth after 4-7 days. More recently, Zierdt et al. (1988) recommended a very complex new medium, "Fastidious Microorganism Medium" with or without agar. They claimed that elevated CO2 levels were not required for growth on agar medium. We prepared the new FMM medium and found that after addition of 1% glucose, growth at 37°C in air was poor and slow. In the presence of 10% CO2 growth was moderate to good, but somewhat less vigorous than on our Yeast autolyzate-Proteose peptone-glucose medium. No growth occurred on either medium in the absence of glucose. Because the FMM medium is costly to prepare, we recommend our medium described in this chapter. Zierdt et al. (1988) also produced some excellent ultrastructural TEM photographs of vegetative cells and asci of C. guttulatus. Because C. guttulatus is short-lived and thus easily lost in collections, a brief description is given of a reliable isolation procedure. Isolation principle: The yeast is most easily isolated from stomach contents of a rabbit, but because fecal material is more readily available, the procedure described below is based on fecal pellets. The yeast requires a balanced mixture of amino acids and vitamins (as found in yeast autolyzate and Proteose peptone), grows between 30 and 40''C, and, for growth on solid media, it requires an elevated concentration of CO2 in the atmosphere. Additionally, it is very tolerant to low pH values of the medium. Use is made of these properties to isolate pure cultures. Method of isolation: Samples of fecal pellets of rabbits, preferably samples of soft feces (the latter normally have

a higher yeast content) are inspected microscopically for the presence of the large C guttulatus cells by suspending small samples in a drop of water on a microscope slide. Material in which the yeast is present in significant numbers gives the best results. The isolation medium contains 1% powdered yeast autolyzate, 1% Proteose peptone (Difco), 2% glucose and the pH is adjusted to 2.8-3.0 with 1N HCl. Fifty-ml portions of this medium in 125-ml Erlenmeyer flasks are sterilized in flowing steam for 10 min. 1. Add one or two rabbit pellets to a flask and incubate for 2-3 days at 37"C. A whitish, granular sediment of yeast forms at the bottom, which should consist of clusters and chains of the characteristic, large cells of C. guttulatus. 2. If the sediment appears satisfactory, transfer 1 ml of the sediment with a sterile pipet to a second flask of the same medium and incubate at 2>TC. 3. After growth has developed, transfer two drops of the sediment to an agar plate (1% yeast autolyzate, 1% Proteose peptone, 2% glucose, pH 5.0) and spread with a loop. The plate is incubated in a small desiccator with a little water in the bottom to raise the humidity. Flush the desiccator with CO2 from a cylinder or place a short piece of lighted candle in the desiccator and put the lid in place. After a few minutes, when the CO2 level has increased, the candle extinguishes and the desiccator is placed at 37°C for 3 days. 4. An isolated colony is then inspected for purity. If bacteria are not eliminated during the previous steps, they would develop on the rich medium at pH 5.0. If the colony is pure, it is transferred to a slant and to a liquid medium of the same composition as used in step 3 and incubated as described above. Note: Growth in liquid medium is always in the form of branched chains of cells, whereas on solid medium the cells occur more typically in short chains, pairs, or singly.

157

26. Debaryomyces Lodder & Kreger-van Rij Nom. Cons. / T. Nakase et al.

26. Debaryomyces Lodder & Kreger-van Rij Nom. Cons. T. Nakase, M. Suzuki, HJ. Phaff and C.P. Kurtzman Diagnosis of the genus Vegetative reproduction is by multilateral budding. Pseudomycelium is absent, primitive, or occasionally well developed. Heterogamous conjugation between a cell and its bud generally precedes ascus formation. Isogamous conjugation also occurs. Ascospores are spheroidal, globose, ovoidal or lenticular and have smooth or warty walls (verrucose to colliculate) that may also have an equatorial ledge or spiral ridges. Ascospores are not liberated from the ascus except for three species, whose asci lyse. One to two spores are usually formed per ascus; in some species up to four spores are present in the ascus. Fermentation is absent, weak or occasionally vigorous. Nitrate is not assimilated. The major ubiquinone is Q-9. Diazonium blue B reaction is negative. Type species Debaryomyces hansenii (Zopf) Lodder & Kreger-van Rij Species accepted 1. Debaryomyces carsonii (Phaff & Knapp) Y. Yamada, Maeda, Banno & van der Walt (1992) 2. Debaryomyces castellii Capriotti (1958) 2). Debaryomyces coudertii Saez (1960) 4. Debaryomyces etchellsii (Kreger-van Rij) Maeda, Y. Yamada, Banno & van der Walt (1992) 5. Debaryomyces hansenii (Zopf) Lodder & Kreger-van Rij (1952) a. Debaryomyces hansenii (Zopf) Lodder & Kreger-van Rij var. hansenii (1985) b. Debaryomyces hansenii wdiX. fabryi (Ota) Nakase & M. Suzuki (1985) 6. Debaryomyces maramus di Menna (1954) 7. Debaryomyces melissophilus (van der Walt & van der Klift) Kurtzman & Kreger-van Rij (1976) 8. Debaryomyces nepalensis S. Goto & Sugiyama (1968) 9. Debaryomyces occidentalis (Klocker) Kurtzman & Robnett (1991) a. Debaryomyces occidentalis (Klocker) Kurtzman & Robnett var. occidentalis (1991) b. Debaryomyces occidentalis var. persoonii (van der Walt) Kurtzman & Robnett (1991) 10. Debaryomyces polymorphus (Klocker) Price & Phaff (1979) 11. Debaryomyces pseudopolymorphus (C. Ramirez & Boidin) Price & Phaff (1979) 12. Debaryomyces robertsiae (van der Walt) Kurtzman & Robnett (1994) 13. Debaryomyces udenii van der Walt, M.Th. Smith & Y. Yamada (1989) 14. Debaryomyces vanrijiae (van der Walt & Tscheuschner) Abadie, Pignal & J.L. Jacob (1963) a. Debaryomyces vanrijiae (van der Walt & Tscheuschner) Abadie, Pignal & J.L. Jacob var. vanrijiae (1984) b. Debaryomyces vanrijiae var. yarrowii (Santa Maria & Garcia Aser) Kreger-van Rij (1984) 15. Debaryomyces yamadae (van der Walt & E. Johannsen) van der Walt, M.Th. Smith & Y. Yamada (1989) Key to species See Table 20. 1. 2(1). 3(2). 4(2). 5(3). 6(5). 7(6).

a b a b a b a b a b a b a b

Sucrose assimilated -^ 2 Sucrose not assimilated D-Xylose assimilated -^ 3 D-Xylose not assimilated -^ 4 Growth in vitamin-free medium -^ 5 Absence of growth in vitamin-free medium —> 8 Erythritol assimilated Erythritol not assimilated Trehalose fermented Trehalose not fermented -^ 6 Fermentation of glucose and sucrose Fermentation of glucose and sucrose is very weak or absent Melibiose assimilated Melibiose not assimilated

D. coudertii:

p. 160

D. melissophilus: p. 164 D. occidentalis var. persoonii: p. 165 D. robertsiae: p. 168 D. polymorphus:

p. 166

—> 7 D. vanrijiae var. vanrijiae: p. 170 D. vanrijiae var. yarrowii: p. 170

Vb. Descriptions of teleomorphic ascomycetous genera and species

158 8(3).

a b 9(8). a b 10(8). a b 11(9). a b 12(11). a b 13(12). a b 14(12). a

D-Gluconate assimilated -^ 9 D-Gluconate not assimilated —> 10 Raffinose assimilated -^ 11 Raffinose not assimilated Glucose fermented Glucose not fermented Erythritol assimilated -^ 12 Erythritol not assimilated —> 15 Fermentation of glucose and sucrose ^ 1 3 Fermentation of glucose and sucrose is very weak or absent Lactose assimilated Lactose not assimilated Ascospores spheroidal, one to two per ascus

b 15(11). a b 16(15). a b

Ascospores ovoidal, one to four per ascus Growth in 10% NaCl/5percnt; glucose -^ 16 Absence of growth in 10% NaCl/5% glucose Fermentation of glucose and sucrose Fermentation of glucose and sucrose is very weak or absent

D. yamadae: p. 171 D. etchellsii: p. 160 D. carsonii: p. 158

-^ 14 D. pseudopolymorphus: D. udenii: D. hansenii var. hansenii: D. hansenii var. fabryi: D. nepalensis: D. maramus:

167 169 161 162 164 163

D. occidentalis var. occidentalis: D. castellii: D. hansenii var. hansenii: D. hansenii war. fabryi:

165 159 161 162

Table 20 Key characters of species in the genus Debaryomyces Species

Fermentation^

Assimilation

G

Su

Tr

Su

La

-

-

-

+

-

+

+

+

+

10% NaCl/

Ra

Xy

Gl

Er

5%G

V

V

+

-

+

+

+

-

+

+

+

+

+

+

Me

Vit

+

V

+

+

+

+

+

+

D. occidentalis var. occidentalis

+

+

-

+

V

V

+

+

+

-

-

-

D. occidentalis var. persoonii

+

+

-

+

+

V

+

-

+

-

-

D. polymorphus

s

s

V

V

+

+

+

+

+

s

-

+

D.

+

+

+

+

+

+

+

+

+

+

-

+

+

+

+

+

+

+

+

+

+

+

+

-

+

+

-

+

+

-

+

Debaryomyces

carsonii

D. castellii D. coudertii

+

-

-

-

+

-

-

+

D. hansenii var. hansenii

w/-

w/- w/-

+

V

V

+

+

X

V

+

D. hansenii var. fabryi

w/-

w/- w/-

+

V

V

+

+

X

V

+

D. maramus

w/-

+

V

V

s

+

+

+

+

+

-

-

-

-

+

+

+

D. etchellsii

D. melissophilus D. nepalensis

pseudopolymorphus

D. robertsiae

X

w/-

+

w/-

-

-

+

-

w/- w/-

D. udenii

ws

w/- w/-

D. uanrijiae var. uanrijiae

w/-

w/-

D. uanrijiae var. yarrowii

w/- w/-

D. yamadae

s

-

-

+ +

Ascospores Shape

Num^

spheroidal

1^

+

spheroidal

1-3 (1)

spheroidal

1

-

spheroidal

1-4

+

spheroidal

1-2 (1)

spheroidal

1-2 (1)

Lib'^

spheroidal

1

spheroidal with equatorial ledge

1-2 (1)

-

-

spheroidal with equatorial ledge

1-2 (1)

-

+

+

spheroidal

1-2 (1)

+

-

spheroidal

1-4

+

+

+

lenticular

1^

+

+

-

-

spheroidal

1^

+

+

+

+

spheroidal

1^

+

V

+

+

spheroidal

1^

w

-

V

-

spheroidal

1^

-

ovoidal

1^(2)

spheroidal

1^

^ Abbreviations: G, glucose; Su, sucrose; Tr, trehalose; La, lactose; Me, melibiose; Ra, raffinose; Xy, D-xylose; Gl, gluconate; Er, erythritol; 10% NaCl/5% G, growth in 10% NaCl/5%) glucose; Vit, growth in vitamin-free medium; +, positive; s, positive but slow; x, positive or weak; w, weak; ws, weak and slow; w/-, weak or negative; v, variable; -, negative. ^ Numbers of ascospores per ascus; numbers in parentheses refer to the number of ascospores most frequently observed. ^' Ascospores liberated by lysis of asci.

Systematic discussion of the species 26.1. Debaryomyces carsonii (Phaff & Knapp) Y. Yamada, Maeda, Banno & van der Walt (1992d) Synonyms: Pichia carsonii Phaff & Knapp (1956) Torulaspora carsonii (Phaff & Knapp) van der Walt & E. Johannsen (1975a)

Debaryomyces vini Zimmermann (1938) nom. nud. Pichia vini (Zimmermann) Phaff (1956) nom. nud. Pichia vini (Zimmermann) Phaff var. melibiosi Santa Maria (1963a) nom. nud.

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to elongate (1.4-4.2) x (2.06.0) |im, and occur singly, in pairs and in chains. Growth is butyrous and tannish-white in color.

26. Debaryomyces Ladder & Kreger-uan Rij Nom. Cons. / T. Nakase et al.

Growth on the surface of assimilation media: Thin to moderately heavy pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant but sparingly branched pseudohyphae. True hyphae are not produced. Aerobic growth is tannish-white, dull to faintly glistening, butyrous and with an entire or occasionally notched margin. Formation of ascospores: Asci may show conjugation between a cell and its bud or may be unconjugated. One to four smooth spheroidal spores form in each ascus, and asci may be persistent or deliquescent. Single-spore isolates from four-spored asci are sporogenous, thus indicating the species to be homothallic. Ascospores were observed on YM agar after 5-10 days at 25°C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + v + v v + + + v v -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + v + + + + v + + +/w -

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction w/Saccharate Growth at 2>TC v 10% NaCl/5% glucose + Co-Q: 9, CBS 2285, CBS 810 (Yamada et al. 1973a). Mol% G + C: 36.8, 37.3, IFO 795, CBS 5254 {T^: Nakase and Komagata 1970b); 38.7, 38.9, CBS 810, CBS 5254 (BD: Price et al. 1978); 39.6-39.7, CBS 2285, CBS 810, CBS 5254 (BD: Kurtzman and Smiley 1979).

Origin of the strains studied: Wine, Germany and South Africa (2); Quercus kelloggii U.S.A. (2); soil, Japan (1); 'alpechin', Spain (1); Aulacigaster sp., U.S.A. (1). Type strain: CBS 2285 (NRRL YB-4275), from Quercus kelloggii. Comments: Pichia vini was first isolated by Zimmermann (1938) from spoiled wine and described as Debaryomyces vini. Later, Phaff (1956) transferred this species when he emended the genus Pichia. Several additional strains were isolated and appeared identical to

159

the original strain except for the presence of deliquescent asci (Kreger-van Rij 1970c). Santa Maria (1963a) obtained two similar cultures from 'alpechin' but described them as P vini var. melibiosi because they assimilated melibiose and raffinose. Pichia carsonii described by Phaff and Knapp (1956), appeared identical with P. vini except for its hat-shaped ascospores. Kreger-van Rij (1970c) showed by transmission electron microscopy that the rather small spores of P. carsonii were actually spheroidal and practically smooth. Consequently, she considered this species a synonym of P. vini. Van der Walt and Johannsen (1975a) pointed out that Zimmermann (1938) failed to provide a Latin diagnosis for Debaryomyces vini and that P. carsonii was the legitimate name. However, they transferred the species to Torulaspora as T. carsonii when they revised that genus. Kurtzman and Smiley (1979) demonstrated by scanning electron microscopy that the ascospores from all extant strains of Pichia carsonii and its synonyms were spheroidal and essentially smooth. Furthermore, they showed by DNA reassociation that the type strains of Pichia vini, P vini var. melibiosi and P. carsonii were highly related and represented the same species. They rejected the transfer of Pichia carsonii to Torulaspora, pointing out that the originally described species of that genus have roughened ascospore walls and coenzyme Q-6 in the electron transport system, whereas P. carsonii has smooth-walled ascospores and forms coenzyme Q-9. Yamada et al. (1992b) compared partial 18S and 26S rRNA sequences from P. carsonii and P. etchellsii and noted their similarity to species of Debaryomyces. From this analysis, Yamada et al. (1992d) transferred P carsonii and P. etchellsii to Debaryomyces. 26.2. Debaryomyces castellii Capriotti (1958e)

Synonyms: Zymodebaryomyces castellii (Capriotti) Novak & Zsolt (1961) Pichia castellii (Capriotti) Campbell (1973) Torulaspora castellii (Capriotti) van der Walt & E. Johannsen (1975a) Debaryozyma castellii (Capriotti) van der Walt & E. Johannsen (1978)

Growth in YM broth: After 3 days at 25°C, the cells are spheroidal to short-ovoidal, (3.8-7.5)x(5-8.5)|im, and single, in pairs or in groups. A sediment and a thin, dull, creeping pellicle are formed. Growth on YM agar: After one month at 17°C, the streak culture is yellowish-white, dull or glistening, smooth, with an occasionally sinuous margin. Dalmau plate culture on corn meal agar: No pseudomycelium is formed. Short, cylindrical cells may be present. Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. The spores are spheroidal with a warty wall. The warts are not always distinctly visible with the light microscope. One to three, but generally one spore per ascus (Fig. 49).

160

Vb. Descriptions of teleomorphic ascomycetous genera and species

Growth on YM agar: After one month at 17T, the streak culture is yellowish-white, dull to shiny, soft, slightly raised in the middle and smooth. Dalmau plate culture on corn meal agar: pseudomycelium is formed.

Fig. 49. D. castellii, CBS 2923. Asci with ascospores, after one month at 20T on V8 agar. Bar = 5 [im.

Ascospores were observed on V8, Gorodkowa, and acetate agars after 1-2 weeks at 20°C. Fermentation: Glucose Galactose Sucrose Maltose

+ + w

Lactose Raffinose Trehalose

+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + +

+ +/w

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + s + + s -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 10% NaCl/5% glucose + 5-Keto-D-gluconate Starch formation Saccharate Growth at 3 7 T Co-Q: 9 (minor components 8 and 10), CBS 2923 (Billon-Grand 1987). Mol% G + C: 37.1, CBS 2923 (BD: Price et al. 1978).

Origin of the strain studied: Soil in Sweden (CBS 2923). Type strain: CBS 2923, isolated by Capriotti. 26.3. Debaryomyces coudertii Saez (1960) Synonyms: Pichia coudertii (Saez) Campbell (1973) Torulaspora coudertii (Saez) van der Walt & E. Johannsen (1975a) Debaryozyma coudertii (Saez) van der Wah & E. Johannsen (1978)

Growth in YM broth: After 3 days at 25°C, the cells are spheroidal to short-ovoidal, (3.5-5.1)x(4-5.8)!im, and single or in pairs. A thin sediment is formed.

No

Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. The spores are spheroidal with a warty wall; one spore is formed per ascus. The presence of many spores gives the culture a brown appearance. Ascospores were observed on V8 agar after 1-2 weeks at room temperature. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + s + + s

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+ s + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 10% NaCl/5% glucose 5-Keto-D-gluconate Starch formation Saccharate Growth at ^TC Co-Q: 9 (minor component 10), CBS 5167 (Billon-Grand 1987). Mol% G + C: 37.4, CBS 5167 (BD: Price et al. 1978).

Origin of the strain studied: Feces of Aptenodytes patagonica, the emperor penguin (CBS 5167). Type strain: CBS 5167, isolated by Saez (1960). Comments: In the description by Kreger-van Rij (1970a, 1984d), D. coudertii was reported not to assimilate L-rhamnose, but in the present study L-rhamnose was assimilated. Assimilation of this sugar was also reported by Barnett et al. (1983, 1990). 26.4. Debaryomyces etchellsii (Kreger-van Rij) Maeda, Y. Yamada, Banno & van der Walt (Yamada et al. 1992d) Synonyms: Pichia etchellsii Kreger-van Rij (1964a) Torulaspora etchellsii (Kreger-van Rij) van der Walt «fe E. Johannsen (1975a) Kloeckera faecalis Batista & Silveira (1959a) Pichia faecalis (Batista & Silveira) Aciole de Queiroz (1970)

Growtli on 5% malt extract agar: After 3 days at

26. Debaryomyces Ladder & Kreger-van Rij Nom. Cons. / T. Nakase et al.

25°C, the cells are ovoidal to ellipsoidal (1.8-5.4)x(2.08.3) (im, and occur singly or in pairs. Growth is white, dull-glistening and butyrous. Growth on the surface of assimilation media: Occasional rings are noted, but pellicles do not form. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows moderately well-branched pseudohyphae with few blastospores. True hyphae are not present. Aerobic growth on morphology agar is white, dull-glistening and butyrous with a finely striated margin. Formation of ascospores: Asci show conjugation between a cell and its bud, or infrequently, conjugation between independent cells. One to four smooth, spheroidal ascospores are formed per ascus, and the asci eventually become deliquescent. Single-spore isolates gave sporogenous colonies, indicating the species to be homothallic. Ascospores were observed on YM agar after 8-10 days at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/w

-

w/w/+ + + + + + +

-

+

-

+ +

-

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+

-

+ + +

V

V

+ +

-

w/s

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate + Gelatin liquefaction 5-Keto-D-gluconate Saccharate Growth at 37T + +

10% NaCl/5% glucose + Co-Q: 9, CBS 2011 (Yamada et al. 1973a). Mol%G + C: 38.5, 40.6, CBS 2011 {T^: Nakase and Komagata 1970b; BD: Price et al. 1978).

Origin of the strains studied: Fermenting cucumber brines, U.S.A. (2); human feces (1). Type strain: CBS 2011 (NRRL Y-7121), one of the strains from cucumber brines. Comments: Debaryomyces etchellsii is phenotypically similar to D. carsonii, differing from the former only by

161

its ability to ferment and by its failure to assimilate starch. However, Kurtzman (unpublished) found only 2% DNA base sequence complementarity between type strains of the two and considered them separate species. As with D. carsonii, D. etchellsii has Q-9 ubiquinone in the electron transport system (Yamada et al. 1973a), and its ascospores are spheroidal and smooth when viewed under the scanning electron microscope (Kurtzman and Smiley 1974). For these reasons, its placement in the genus Torulaspora by van der Walt and Johannsen (1975a) was rejected. On the basis of rRNA comparisons, Yamada et al. (1992d) transferred Pichia carsonii and P. etchellsii to Debaryomyces. 26.5. Debaryomyces hansenii (Zopf) Lodder & Kreger-van Rij (1952) This species has two varieties: Debaryomyces hansenii (Zopf) Lodder & Kreger-van Rij var. hansenii (1985) Anamorph: Candida famata (Harrison) S.A. Meyer & Yarrow var. famata Synonyms: Saccharomyces hansenii Zopf (1889) Pichia hansenii (Zopf) Campbell (1973) Torulaspora hansenii (Zopf) van der Walt & E. Johannsen (1975a) Debaryozyma hansenii (Zopf) van der Walt & E. Johannsen (1978) Debaryomyces tyrocola Konokotina (1913) Debaryomyces tyrocola Konokotina var. hansenii (Zopf) Dekker (Stelling-Dekker 1931) Debaryomyces membranaefaciens Naganishi (1917) Debaryomyces kloeckeri Guilliermond & Peju (1919) Saccharomyces kloeckeri (Guilliermond & Peju) Brumpt (1927) Debaryomyces matruchoti Grigoraki & Peju (1921) Atelosaccharomyces hudeloi de Beurmann & Gougerot (1910) Debaryomyces hudeloi (de Beurmann & Gougerot) da Fonseca (1922) Debaryomyces kloeckeri Guilliermond & Peju var. hudeloi (de Beurmann & Gougerot) Dekker (Stelling-Dekker 1931) Torula Candida Saito (1922) Torulopsis Candida (Saito) Lodder (1934) Cryptococcus candidus (Saito) Skinner (1950) Debaryomyces hildegaardi Ota (1923) 7Debaryomyces laedegaardi Ota (1923) 1 Debaryomyces leopoldi Ota (1923) 1Debaryomyces lundsgaardi Ota (1923) Debaryomyces gruetzii Ota (1924b) ^Debaryomyces tremoniensis Ota (1924b) 1Debaryomyces fabryi Ota var. tremoniensis (Ota) Dodge (1935) 1Debaryomyces emphysematosus Ota (1924b) Mycotorula famata Harrison (1928) Geotrichum famatum (Harrison) Dodge (1935) Torulopsis famata (Harrison) Lodder & Kreger-van Rij (1952) Candida famata (Harrison) Novak & Zsolt (1961) nom. inval. Candida famata (Harrison) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Debaryomyces matruchoti Grigoraki & Peju var. cesarii Dekker (Stelling-Dekker 1931) Debaryomyces guilliermondii Dekker (Stelling-Dekker 1931) Debaryomyces guilliermondii Dekker var. noua-zeelandicus Lodder (1932) Debaryomyces membranaefaciens Naganishi var. hollandicus Lodder (1932) Debaryomyces kloeckeri Guilliermond & Peju var. major Lodder (1932)

162

Vb. Descriptions of teleomorphic ascomycetous genera and species

Debaryomyces sake Saito & Oda (1932) ICryptococcus minor Pollacci & Nannizzi (Nannizzi 1934) ITorulopsis minor (Pollacci & Nannizzi) Lodder (1934) IParendomyces minor (Pollacci & Nannizzi) Dodge (1935) IRhodotorula minor (Pollacci & Nannizzi) Krasil'mkov (1954a) Debaryomyces miso Mogi (1938a) Debaryomyces nicotianae Giovannozzi (1939) Debaryomyces nicotianae Giovannozzi var. minor Giovannozzi (1939) Debaryomyces marylandii Giovannozzi (1941) 1 Candida anomala C. Ramirez Gomez (1957) Paratorulopsis banheggii Galgoczy & Novak (1962) Torulopsis westerdijkii Novak & Vitez (1964) 7Candida periphelosum Nagasawa, Ono, Kudo & Harada (1975) nom. nud. Torulopsis armenti Kockova-Kratochvilova, Slavikova & Beranek (1977a)

Debaryomyces hansenii var. fabryi (Ota) Nakase & M. Suzuki (1985b) Anamorph: Candida famata (Harrison) S.A. Meyer & Yarrow var. flareri (Ciferri & Redaelli) Nakase & M. Suzuki Synonyms: Blastodendrion flareri Ciferri & Redaelli (1935) Parendomyces flareri (Ciferri & Redaelli) Dodge & Moore (1936) Candida flareri (Ciferri & Redaelli) Langeron & Guerra (1938) Candida famata (Harrison) S.A. Meyer & Yarrow var. flareri (Ciferri & Redaelli) Nakase & M. Suzuki (1985b) Debaryomyces fabryi Ota (1924b) Eutorulopsis subglobosa Zach (Wolfram and Zach 1934b) Debaryomyces matruchoti Grigoraki & Peju var. subglobosus Zach (Lodder and Kreger-van Rij 1952) Debaryomyces subglobosus (Zach) Lodder & Kreger-van Rij (1952) Debaryomyces fukuyamaensis Naganishi (1941b) ^Debaryomyces orientalis Naganishi (1941a) Pichia adzetii F.H. Jacob (1969b)

Growth in YM broth: After 3 days at 25°C, the cells are spheroidal to short-ovoidal, (2-7.2)x(2.2-8.6)|im, and single, in pairs or in short chains. A sediment, a ring and, in some strains, a smooth or wrinkled, dry pellicle or islets are formed. Growth on YM agar: After one month at IT'^C, the streak culture is grayish-white to yellowish, soft, shiny or dull, smooth or partly or entirely striped or wrinkled. Dalmau plate culture on corn meal agar: Pseudomycelium is usually lacking, but occasionally a primitive, or even a well-developed pseudomycelium is formed. Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation; conjugation between separate cells may also occur. The spores are spheroidal with a warty wall. The wartiness is not always distinct under the light microscope. With the scanning electron microscope, warts appear as small blunt protuberances or as small ridges (Kurtzman et al. 1975). In two strains, a unique wale-type of surface ornamentation of ascospores was observed by Banno and Mikata (1985). Usually one, seldom two spores are formed per ascus (Fig. 50). The presence of many spores gives the culture a brown color. Ascospores were observed on V8, Gorodkowa, acetate and YM agars after 1-2 weeks at or below 20''C.

<:--|;;l:iii!iii|;|J^^j

^::?IJi ;;••;.;•:;

MBBiii

Fig. 50. D. hansenii var. hansenii, JCM 2093. Asci with one ascospore each, after one month on V8 agar at 20°C. Bar = 5 ^im.

Fermentation: Glucose Galactose Sucrose Maltose

w/w/w/w/-

Lactose Raffinose Trehalose

+ +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

w/w/-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

V

+ + + + V V

+ V V V

+ +/w V V V V

V

-

+/w + V

+ V

+ +/w + +/w +/w V

+ V

V

-

Additional assimilation tests and other g;rowf characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate 10% NaCl/5% glucose

+ V

+

Nitrite Starch formation Growth at 37T Max, growth temp. (°C)

V

31-:

Co-Q: 9 (minor component 8) (Nakase and Suzuki 1985a). Mol% G + C: 38.2-38.6, type strain and 5 additional strains (BD: Price et al. 1978); 36.3-37.8 mol%, type strain and 33 additional strains (T^^: Nakase and Suzuki 1985a), for the variety hansenii; 37.3 mol%, CBS 792 (Price et al. 1978), 36.4-36.8 mol%, type strain and 5 additional strains ( 7 ^ : Nakase and Suzuki 1985a), for the yauQty fabryi.

Supplemental description of D. hansenii var. fabryi: The variety fabryi can be physiologically distinguished from the variety hansenii only by maximum growth temperature. The maximum growth temperature of the variety fabryi is 36-39^C, whereas that of the variety hansenii is Sl-SS^'C. Growth at 37°C by the wsiriQty fabryi may be variable.

26. Debaryomyces Ladder & Kreger-van Rij Nom. Cons. / T. Nakase et al.

Origin of the strains belonging to the variety hansenii: Cheese, CBS 766 and three strains; sausages, CBS 773 and CBS 791; sake moto, CBS 2333 = JCM 2111; edomiso, CBS 2331 = JCM 2162; rennet, CBS 772; tobacco, CBS 811 and 2 other strains; psoriasis, CBS 161; infected nails, CBS 790; infected hand, CBS 5704; patient with angina, CBS 770; wound, CBS 788; salmon (shake in Japanese), JCM 2213; unknown, NRRL Y-7393 and 8 other strains. Type strain: CBS 767, a strain with the name Saccharomyces hansenii received in the Delft CBS collection from the Carlsberg Laboratory. Origin of the strains belonging to the variety/a^rv^*: Interdigital mycotic lesion, CBS 789 = JCM 2104; tanning liquor, CBS 6066, type strain of Pichia adzetii; infected nail, CBS 792, type strain of Z). subglobosus; rice vinegar mash, JCM 2207 = IFO 0037; skin lesion, CBS 1796; spoiled sake, JCM 1527 = IFO 0059. Type strain: CBS 789. Comments: Price et al. (1978) found that Z). subglobosus (CBS 792) and D. nepalensis (CBS 5921) showed 39.7% and 15.4% relative DNA relatedness to the type strain of D. hansenii (CBS 767), respectively. Nakase and Suzuki (1985a,b) further investigated strains of D. hansenii, its anamorphs and D. nepalensis chemotaxonomically, and divided them into two species and two varieties based on DNA-DNA hybridization, i.e., D. hansenii var. hansenii (anamorph Candida famata var. famata), D. hansenii var. fabryi (anamorph Candida famata var. flareri) andD. nepalensis (anamorph Candida naganishii). Also, they showed D. subglobosus to be a synonym of D. hansenii var. fabryi. Debaryomyces hansenii var. hansenii can be distinguished from the variety y^Z^ry/ and D. nepalensis by its lower maximum growth temperature and the lack of glucose-6-phosphate dehydrogenase (EC 1.1.1.49) activity. Almost all strains of D. hansenii var. hansenii can be clearly separated from the variety fabryi and D. nepalensis by the difference in maximum growth temperature. In the case of some strains, the separation of these taxa by enzyme patterns is more useftil. The separation of D. hansenii var. fabryi from D. nepalensis based on maximum growth temperature is difficult because their ranges overlap. At present, these taxa can be distinguished from each other only by the different banding pattern of malate dehydrogenase (EC 1.1.1.37). 26.6. Debaryomyces maramus di Menna (1954a) Synonyms: Pichia mamma (di Menna) Phaff (1956) Zymodebaryomyces marama (di Menna) Novak & Zsolt (1961)

Growth in YM broth: After 3 days at 25°C, the cells are spheroidal to short-ovoidal, (2-4)x(3.4-9) |im, and single, in pairs or in chains. A sediment, a ring and, occasionally, a thin dull pellicle are formed. Growth on YM agar: After one month at 17°C, the

163

~c£kM-^L^M

m m m

•*

*';;:;;:;•:,

ifciW*^'

Fig. 51. Z). maramus, CBS 1958. Asci with ascospores, after one month on YM agar at 20°C. Bar = 5 |im.

Streak culture is yellowish-white, soft, shiny to dull, and smooth. Dalmau plate culture on corn meal agar: No pseudomyceHum is formed. Short cylindrical cells may be present. Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. The spores are ovoidal. In the scanning electron microscope, they have spiral ridges (Kurtzman et al. 1975). Under the light microscope they may appear to be smooth. One to four, usually two, spores are formed per ascus (Fig. 51). The presence of many spores gives the culture a brown color. Ascospores were observed on V8 and YM agars after 1-2 weeks at or below 20°C.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

w/-

Lactose Raffinose Trehalose

-

+ +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

V

+ + + + V V

s + V

+ + +

-

+

-

w/-

-

+ + + +

-

+ + + + +

-

+ +

-

164

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 10% NaCl/5% glucose + 5-Keto-D-gluconate Starch formation Saccharate Growth at 37°C Co-Q: 9 (minor components 8 and 10), CBS 1958 (Billon-Grand 1987; Yamada et al. 1976b). MoI% G + C: 39.1, CBS 1958 (BD: Price et al. 1978).

Origin of the strains studied: Air in New Zealand, CBS 1958 = JCM 1528; cider, CBS 4264 = JCM 6179 = NRRL Y-7427; possible case of human disease, CBS 1794 = JCM 6178; soil in Iran, CBS 6905 = JCM 6277. Type strain: CBS 1958, isolated by di Menna in New Zealand. Comments: D. maramus is the only Debaryomyces species with spiral ridges on the spore wall.

26.7. Debaryomyces melissophilus (van der Walt & van der Klift) Kurtzman & Kreger-van Rij (1976) Synonyms: Pichia melissophila van der Walt & van der Klift (1972) Torulopsis melissophila van der Walt & van der Klift (1972) Torulaspora melissophila (van der Walt & van der Klift) van der Walt & E. Johannsen (1975a) Debaryozyma melissophila (van der Walt & van der Klift) van der Walt & E. Johannsen (1980)

Growth in YM broth: After 3 days at 25°C, the cells are short-ovoidal or ovoidal, (1.4-4.2)x(2.4-5.6) jim, and single, in pairs or in short chains. A sediment is formed. Growth on YM agar: After one month at IV^'C, the streak culture is cream-colored, soft, smooth and dull to shiny. Dalmau plate culture on corn meal agar: pseudomycelium is formed.

No

Formation of ascospores: Conjugation between a cell and its bud or between separate cells precedes ascus formation. The spores are spheroidal with a warty wall which is detectable by scanning electron microscopy and in ultrathin sections (Kurtzman and Kreger-van Rij 1976), but not under the light microscope. One to four spores are formed in the zygote, either in one of the fused cells or distributed between both. The cells may form protuberances by which conjugation takes place. Single spores give cultures which sporulate again (van der Walt and van der Klift 1972, Kurtzman and Kreger-van Rij 1976). Ascospores were observed on V8 and YM agars after 1-2 weeks at or below 20°C. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s V

+ + w/-

-

+

-

w/-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

-

+ + + +

-

+ s + V

s

-

+/w s Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate v 10% NaCl/5% glucose 5-Keto-D-gluconate Starch formation Saccharate Growth at 2>TC Co-Q: 9 (van der Walt and Johannsen 1980). Mol% G + C: 39.8, CBS 6344 (BD: Price et al. 1978).

+ -

Origin of the strains studied: Digestive tract of the African honey bee {Apis mellifera var. adansonii), CBS 6344 = JCM 1707 = NRRL Y-7585; soil in South Africa, CBS 6694 = NRRL Y-7772 = JCM 6195; unknown, NRRL Y-7804 = JCM 1708. Type strain: CBS 6344, isolated from an African bee. 26.8. Debaryomyces nepalensis S. Goto & Sugiyama (1968) Anamorph: Candida naganishii Nakase & M. Suzuki Synonyms: Debaryomyces cauensis Giovannozzi (1941) Debaryomyces Japonicus Naganishi (1941a) ISaccharomyces disaccharomellis Kawano, Kojima, Ohosawa & Morinaga (1976) Candida naganishii Nakase & M. Suzuki (1985b)

Growth in YM broth: After 3 days at 25°C, the cells are spheroidal, sub-spheroidal, or short ovoidal, (26) X (2.5-6.5) |im, and single, in pairs, or in short chains. A sediment, a ring, and occasionally a thin, smooth or wrinkled pellicle or islets are formed. Growth on YM agar: After one month at 17°C, the streak culture is grayish to yellowish, soft, shiny or dull, smooth or wrinkled. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudomycelium is absent or rudimentary. Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. Spores are spheroidal and have a warty wall which was observed by Banno and Mikata (1985) using scanning electron microscopy. Usually, one spore is formed per ascus. Ascospores were observed on YM agar after 1-2 weeks at or below 20T.

26. Debaryomyces Ladder & Kreger-uan Rij Nom. Cons. / T. Nakase et al.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

w/-

-

w/-

-

+ + + + + + + V

+ + +

-

+ + + V

s

Lactose Raffinose Trehalose

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

w/w/-

V

-

+ + + +

V

+ + + + s V

+ +

-

165

Debaryomyces occidentalis var. persoonii (van der Walt) Kurtzman & Robnett (1991) Synonyms: Schwanniomyces persoonii van der Walt (1962) Schwanniomyces ukrainicus Kvasnikov, Nagomaya & Shchelokova (1979a) Schwanniomyces occidentalis Klocker var. persoonii (van der Walt) Phaff & M.W. Miller (1984b)

Growth in YM broth: After 3 days at 25°C, the cells are ovoidal, globose, or sometimes egg-shaped, (3.58.0) X (4.5-9.0) |im, occasionally up to 10|im long, and single, in pairs or in short chains or clusters. No pellicle is formed, but a sediment is present. Growth on YM agar: After one month at IT^'C, the streak culture is cream-colored, smooth, and semi-glossy; the texture is pasty to soft. The cross section is broadly convex and the border entire. Slide culture on corn meal agar: Pseudomycelium is absent aerobically and anaerobically.

Formation of ascospores: Cells are haploid. Before sporulation the nucleus divides, which is followed by ftision. The diploid nucleus ordinarily undergoes reducAdditional assimilation tests and other growth tion division in a special open bud-like structure, the meiosis bud, and this is followed by the formation of characteristics: Starch formation 2-Keto-D-gluconate + one or, more rarely, two ascospores in the parent cell. Growth at 37°C 5-Keto-D-gluconate Alternatively, the nucleus in the parent cell may divide, Max. growth temp. ("C) 36-37 Saccharate after which one of the daughter nuclei moves into a small 10% NaCl/5% glucose + bud which is temporarily separated from the parent cell by Co-Q: 9 (minor component 8) JCM 2095 and JCM 2164 (Nakase and a septum. The septum then lyses, the two nuclei fuse, and Suzuki 1985a); CBS 5230 (Billon-Grand 1987). Mol% G + C: 37.6-38.0, type strain and 3 additional strains {T^: Nakase meiosis follows. Rarely, diploidization is accomplished and Suzuki 1985a); 39.1 mol%, CBS 5921 (BD: Price et al. 1978). by the fusion of two individual cells. The spores are globose, have a warty surface, an equatorial ledge and a Origin of the strains studied: Soil in Nepal, pronounced lipid globule. They somewhat resemble the CBS 5921 = JCM 2095 = NRRL Y-7534; fermenting appearance of a walnut. There is usually one spore per Maryland tobacco, CBS 1325 = JCM 2164, type strain ascus, occasionally two (Fig. 52). of D. cauensis; sediment in spoiled sake, CBS 2334, type Sporulation is best after approximately 5-7 days on strain of D.japonicus; unknown, JCM 2209 = IFO 0085. yeast autolyzate agar with 2% glucose. Ascospores are Type strain: CBS 5921. also observed on YM agar after 1-2 weeks at 25°C.

-

w

Comments: D. nepalensis shows close physiological similarity to D. hansenii, but it is a genetically distinct species from D. hansenii (Price et al. 1978, Nakase and Suzuki 1985a). See Comments under D. hansenii. 26.9. Debaryomyces occidentalis (Klocker) Kurtzman & Robnett (1991) This species has two varieties: Debaryomyces occidentalis (Klocker) Kurtzman & Robnett var. occidentalis (1991) Synonyms: Schwanniomyces occidentalis Klocker (1909a) Schwanniomyces castellii Capriotti (1957) Schwanniomyces alluvius Phaff, M.W. Miller & Cooke (1960)

Fig. 52. D. occidentalis var. occidentalis, CBS 4516. Asci with one or two ascospores, after one week on yeast autolyzate agar with 2% glucose at 25°C. Bars = 4^im.

Vb. Descriptions of teleomorphic ascomycetous genera and species

166

Fermentation:

D. occidentalis can be distinguished from other ascomycetous yeast species by the unique shape of w/the ascospores. Kurtzman et al. (1972) have illustrated the spore topography by scanning electron microscopy. V Ferreira and Phaff (1959) described the life cycle of Assimilation: Schwanniomyces based on nuclear staining of cells in Glucose + A/^-Acetyl-D-glucosamine + the process of meiosis. They presented evidence that, Galactose + Methanol L-Sorbose V Ethanol + following karyogamy, meiosis took place in an open budSucrose + Glycerol s like structure, the meiosis bud, and that the haploid nuclei Maltose + Erythritol moved back into the parent cell, where one, or more rarely Cellobiose V + Ribitol two, developed into ascospores. Kreger-van Rij (1977a) Trehalose + Galactitol restudied the life cycle and concluded that conjugation Lactose V D-Mannitol s Melibiose V D-Glucitol V took place between a small bud cell and the parent cell Raffinose + a-Methyl-D-glucoside V by lysis of the connecting septum and that karyogamy Melezitose + Salicin + and meiosis probably occur in the parent cell. This view Inulin + D-Gluconate s was shared by Forrest et al. (1987). It is also possible Soluble starch + DL-Lactate that both types of life cycles mentioned above occur in D-Xylose + Succinate s L-Arabinose V Citrate s this yeast. Kreger-van Rij (1977a) also determined, by D-Arabinose Inositol electron microscopy of ultrathin sections, details of spore D-Ribose Hexadecane V wall development and internal structure. L-Rhamnose Nitrate Price et al. (1978) carried out DNA/DNA reassociaD-Glucosamine Vitamin-free ws tion experiments among the various strains of SchwanAdditional assimilation tests and other growth niomyces. Polynucleotide sequence relationships between characteristics: reference DNA from S. occidentalis and DNA from 2-Keto-D-gluconate 10% NaCl/5% glucose + S. castellii and S. alluvius were at the 97% level or 5-Keto-D-gluconate Starch formation Saccharate Growth at 37°C V greater and the last two species were therefore placed into 7.5% NaCl/5% glucose + synonymy with S. occidentalis. The type strain of S. perCo-Q: 9, CBS 819 (Yamada et al. 1977). soonii showed 83% and a second strain 80% sequence Mol% G + C: 35.2, CBS 4516, type strain of Schwanniomyces alluvius; 35.2, CBS 2863, type strain of Schwanniomyces castellii; 35.3, CBS complementarity with the DNA from S. occidentalis. This 1153, Carlsberg strain of Schwanniomyces occidentalis (BD: Price et al. lower DNA relatedness coupled with several differences 1978); 35.4, wanQty persoonii (BD: Price et al. 1978). in carbon compound assimilation induced these authors to retain S. persoonii as a variety of S. occidentalis. Supplementary description of D. occidentalis var. Yamada et al. (1991c) reported partial sequences of 18S persoonii: The variety persoonii does not assimilate and 26S ribosomal RNAs of strains of S. occidentalis cellobiose, galactose or D-xylose and these differences allow it to be separated from the variety occidentalis using var. occidentalis and S. occidentalis var. persoonii. standard growth tests. In addition, the variety persoonii They suggested that the genus Schwanniomyces might does not grow on salicin, or on 7.5% NaCl/5% glucose. be retained as its own genus separate from the genus Morphologically the two varieties are similar, as are their Debaryomyces based on the two base differences observed in 168 bases of 18S RNA between the type species of life cycles. the genera. However, since the two base differences are Origin of the strains belonging to the variety considered to be too small for generic separation, we occidentalis: Soil samples in Ohio, Michigan, Spain, adopted the proposal by Kurtzman and Robnett (1991). Island of St. Thomas (10). Type strain: CBS 819 (ATCC 2322). Origin of the strains belonging to the variety per- 26.10. Debaryomyces polymorphus (Klocker) Price & Phaff (1979) soonii: Soil samples in the Transvaal, South Africa (2), Glucose Galactose Sucrose Maltose

+ s +

Lactose Raffinose Trehalose

-

Russia (1). Type strain: CBS 2169 (NRRL Y-7400). Comments: Kurtzman and Robnett (1991) proposed the transfer of Schwanniomyces occidentalis to the genus Debaryomyces on the basis of sequence similarity in partial ribosomal RNA sequences between S. occidentalis and several Debaryomyces spp. They determined the extent of divergence in three regions from 18S and 25S subunit ribosomal RNAs, comprising a total of 900 nucleotides.

Synonyms: Pichia polymorpha Klocker (1912a) Saccharomyces polymorphus (Klocker) Novak & Zsolt (1961) Torulaspora polymorpha (Klocker) van der Walt & E. Johannsen (1975a) Debaryozyma polymorpha (Klocker) van der Walt & E. Johannsen (1978) Debaryomyces cantarellii Capriotti (1961a) Pichia cantarellii (Capriotti) Campbell (1973) Debaryomyces phaffii Capriotti (1961b) Torulaspora phaffii (Capriotti) van der Walt & E. Johannsen (1975a)

Growth in YM broth:

After 3 days at 25°C, the

26. Debaryomyces Ladder & Kreger-uan Rij Nom. Cons. / T. Nakase et al.

cells are ovoidal, long-ovoidal and cylindroidal, (1.57.5)X (3.5-13.5) [xm and longer; they are single or in pairs. A sediment and a thin pellicle are formed. Growth on YM agar: After one month at 17°C, the streak culture is cream-colored to yellowish, soft, flat, smooth or partly wrinkled, dull to shiny. Dalmau plate culture on corn meal agar: No pseudomycelium is formed. Tree-like chains of cells may be present. Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. Conjugation between two cells of nearly equal size may also occur. The spores are spheroidal with a warty wall. The warts are not always distinct with the light microscope. With scanning electron microscopy they are clearly observed (Kurtzman and Smiley 1974, Kurtzman et al. 1975). Asci may form up to two spores, but there is generally one spore per ascus. Ascospores were observed on V8, Gorodkowa and corn meal agars after 1-2 weeks at or below 20°C. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafifinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s w/s w/-

Lactose Raffinose Trehalose

+ + + + + + +

A^^-Acetyl-D-g]lucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V V

+ + + + + V V V

V

-

ws

-

+

-

+ + + + + + + + + +

Comments: Forrest et al. (1987) studied the nuclear behavior in growing, dividing, and ascospore-forming cells of a strain of D. polymorphus by light microscopy offixedGiemsa stained preparations. They concluded that meiosis took place in the parent cell and not in the bud, and that the term "meiosis bud" therefore did not apply to this yeast. 26.11. Debaryomyces pseudopolymorphus (C. Ramirez & Boidin) Price & Phaff (1979) Synonyms: Pichia pseudopolymorpha C. Ramirez & Boidin (1953a) Saccharomyces pseudopolymorphus (C. Ramirez & Boidin) Novak & Zsolt (1961) Torulaspora pseudopolymorpha (C. Ramirez & Boidin) van der Walt & E. Johannsen (1975a) Debaryozyma pseudopolymorpha (C. Ramirez & Boidin) van der Walt & E. Johannsen (1978)

Growth in YM broth: After 3 days at 25°C, the cells are long-ovoidal to cylindroidal, (3-6.5) x (4.5-16) ^im, and single or in pairs. A sediment and a dull creeping pellicle are formed. Growth on YM agar: After one month at 17°C, the streak culture is white or cream-colored to yellowish, soft, dull and wrinkled. The edge is fringed with pseudomycelium. Dalmau plate culture on corn meal agar: A primitive pseudomycelium is formed that consists of tree-like chains of elongated cells.

-

+ +

-

V

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 10% NaCl/5% glucose 5-Keto-D-gluconate v Starch formation Saccharate Growth at 37°C Co-Q: 9 (minor components 7, 8 and 10) (Yamada et al. 1973a, Billon-Grand 1987). Mol% G + C: 35.7-35.9, 5 strains (BD: Price et al. 1978).

167

+ v 1976b,

Fig. 53. D. pseudopolymorphus, CBS 2008. Asci with ascospores, after one month on V8 agar at lO^C. Bar = 5 ^xm.

Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. The spores are spheroidal. They have a warty wall which is distinct in the scanning electron microscope (Kurtzman and Smiley 1974), but not always visible under the light microscope. One to four spores are formed per ascus (Fig. 53). According to Kreger-van Rij (1984d), one to two spores form on Gorodkowa agar and two to four on acetate agar, but we observed one to four on Gorodkowa agar. Ascospores were observed on acetate, Gorodkowa and V8 agars after 1-2 weeks at or below 20°C.

Origin of the strains studied: Soil in Denmark, CBS 186 = JCM 3647, CBS 1359; soil in the Netherlands (1); soil in Finland, CBS 4346, type strain of Debaryomyces Fermentation: Glucose phqffii; CBS 4349, type strain of Debaryomyces cantarel- Galactose lii; CBS 4350; toadstool (1); anthill in Russia (2). Sucrose Type strain: CBS 186, from Klocker's collection. Maltose

+ ws s w/-

Lactose Raffinose Trehalose

168

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Vb. Descriptions of teleomorphic ascomycetous genera and species

+ + + + + + + + + + +

-

+ + +

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + + + + + + + s + + +

Additional assimilation tests and other growth characteristics: + + w/-

9

r

4° •®«*®

(

Fig. 54. D. robertsiae, CBS 5637. Asci with 1-2 ascospores, after 1 week on YM agar at 25°C. Bar=5 [Am.

+ 10% NaCl/5% glucose + 2-Keto-D-gluconate 5-Keto-D-gluconate Starch formation Growth at 37''C Saccharate Co-Q: 9 (minor components 7, 8 and 10) (Yamada et al. 1973a, BillonGrand 1987). Mol% G + C: 35.7, 2 strains (BD: Price et al. 1978).

Origin of the strains studied: Tanning liquor, CBS 2008, CBS 2009 = JCM 6184. Type strain: CBS 2009. 26.12. Debaryomyces robertsiae (van der Walt) Kurtzman & Robnett (1994b) Synonyms: Pichia robertsiae (as P. robertsii) van der Walt (1959a) Wingea robertsii (van der Walt) van der Walt (1967) nom. inval. Wingea robertsii (van der Walt) van der Walt (1971)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal (2.1-7.0) X (2.6-7.0) |im, and occur singly, in pairs or occasionally in small clusters. Growth is butyrous and light tannish-white in color. Growth on the surface of assimilation media: Dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, only budding yeast cells are detected under the coverglass. Aerobic growth is white, butyrous, and with a smooth semi-glistening surface having a depressed center. Colony margins are smooth to finely scalloped. A faint acidic odor is present. Formation of ascospores: Asci are occasionally unconjugated, but most show conjugation between independent cells or between a cell and its bud. Some asci form protuberances which may serve the ftinction of bud conjugants. Asci are persistent and contain one to four ascospores; the ascospores are smooth, lenticular and show a light brown coloration (Figs. 54, 55). Heavily sporulating cultures become dark red in color. Singlespore isolates obtained by micromanipulation of random

Fig. 55. D. robertsiae, CBS 5637. Scanning electron micrograph of enzymatically freed ascospores. Bar = 0.5!im.

spores freed enzymatically from asci of NRRL Y-7680 (CBS 5637) gave only sporogenous colonies suggesting that D. robertsiae is homothallic (Kurtzman, unpublished data). Ascospores were observed on YM agar after 1-2 weeks at 25°C. Sporulation is often sparse but some singlespore isolates sporulate heavily as do occasional colony sectors. Fermentation: Glucose Galactose Sucrose Maltose

+

-

+ +

Lactose Raffinose Trehalose

-

w/+

26. Debaryomyces Lodder & Kreger-oan Rij Nom. Cons. / i? Nakase et a[.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

+ + + + +

+

-

+

+ -

+ + -

v

+ -

N-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ -

+ +

+ + -

+ + +

+ + -

+ + -

+lw

-

+Is

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37°C 10% NaCII5% glucose + Co-Q: 9, CBS 2934 (Yamada et al. 1973a). Mol% G + C : 42.7, CBS 2934 (BD: Price et al. 1978).

169

-

-

Origin of the strains studied: NRRL Y-6670 (CBS 2934), from a larval feed of the South African carpenter bee (Xylocopa c a m , Transvaal; NRRL Y-7680 (CBS 5637), from pollen carried by a South African carpenter bee, Transvaal. Type strain: CBS 2934 (NRRL Y-6670), from van der Walt, South Africa. Comments: D. robertsiae is unique among yeasts because of the lenticular shape of its ascospores, otherwise, it is phenotypically similar to other members of the genus Debaryomyces. Kurtzman and Robnett (199413) showed from analysis of partial 18s and 26s rRNA sequences that D. robertsiae is a member of the genus Debaryomyces. 26.13. Debaryomyces udenii van der Walt, M.Th. Smith & Y. Yamada (198913) Growth in YM broth: After 3 days at 25OC, the cells are spheroidal to short-ovoidal (2.0-5.6)x(2.5-5.6)pm, and single, in pairs, in short chains or in small clusters. A sediment and a thin pellicle are formed. Growth on YM agar: After one month at 17OC, the streak culture is cream-colored, soft, smooth and dull. Dalmau plate culture on corn meal agar: No pseudomycelium is formed. Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. Asci also arise from the conjugation of independent cells. Asci slowly lyse, liberating the ascospores which tend to agglutinate. The ascospores are globose to ellipsoidal, and appear glabrous by light microscopy. By TEM, the surface appears to be colliculate to pusticulate (van der Walt et al. 1989b). One

Fig. 56. D. udenii, CBS 7056. Lysing asci with ascospores, after two weeks on YM agar at 25°C. Bar=5 ym.

to four spores per ascus are formed (Fig. 56). Actively sporulating cultures on YM agar are pale brown. Ascospores were observed on YM agar after 1-2 weeks at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-XyloSe L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

ws -

wlwl-

+ + ws

+ +

+ +

-

+ +

+

-

+

+ s -

+ ws wl-

Lactose Raffinose Trehalose

N-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

wl-

+ -

+

+

+ + -

+

+ +

+ s

-

s s -

s -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 10% NaCII5% glucose + 5-Keto-D-gluconate Starch formation Saccharate Growth at 37°C Co-Q: 9, CBS 7056 (van der Walt et al. 1989b). Mol% G + C : 35.8, CBS 7056 (T,: van der Walt et al. 1989b).

-

Origin of the strains studied: Soil samples collected in the Pinery Provincial Park, Ontario, Canada (CBS 7056 and CBS 7057). Type strain: CBS 7056. Comments: The results from the present study are in agreement with the original description, except for the positive assimilation of soluble starch. D. udenii forms colliculate ascospores which can be liberated from the ascus. By comparison of 18s and 26s ribosomal RNA partial sequence analyses, Yamada et al. (1991a) showed that D. udenii is closely related to other Debaryomyces species. D. udenii physiologically resembles D. castellii,

Vb. Descriptions of teleomorphic ascomycetous genera and species

170

Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. The spores are spheroidal, and one to four are formed per ascus (Fig. 57). They have a warty wall which is not always visible under the light microscope, but is clearly observed by 26.14. Debaryomyces vanrijiae (van der Walt & scanning electron microscopy (Kurtzman et al. 1975) and Tscheuschner) Abadie, Pignal & J.L. Jacob in ultrathin sections (Santa Maria and Garcia Aser 1971). (1963) Ascospores were observed on V8, acetate, YM and malt agars after 1-2 weeks at or below 20°C. This species has two varieties: Debaryomyces vanrijiae (van der Walt & Tscheusch- Fermentation: w/Lactose ner) Abadie, Pignal & J.L. Jacob var. vanrijiae Glucose Galactose Raffinose (1984) Sucrose w/Trehalose Synonyms: Maltose Pichia vanrijiae (as P. uanriji) van der Walt & Tscheuschner (1956a) Azymomyces uanriji (van der Walt & Tscheuschner) Novak & Zsolt Assimilation: D. pseudopolymorphus, and D. yamadae, but it is distinguished from these three species by its lytic asci and by differences in the assimilation of lactose, melibiose and erythritol.

(1961) Torulaspora uanriji (van der Walt & Tscheuschner) van der Walt & E. Johannsen (1975a) Debaryozyma uanriji (van der Walt & Tscheuschner) van der Walt & E. Johannsen (1978) Debaryomyces konokotinae Kudryavtsev (1960) Debaryomyces formicarius Golubev & Bab'eva (1972) Torulaspora formicaria (Golubev & Bab'eva) van der Walt & E. Johannsen (1975a)

Debaryomyces vanrijiae var. yarrowii (Santa Maria & Garcia Aser) Kreger-van Rij (1984d) Synonyms: Debaryomyces yarrowii Santa Maria & Garcia Aser (1971) Torulaspora yarrowii (Santa Maria & Garcia Aser) van der Walt & E. Johannsen (1975a)

Growth in YM broth: After 3 days at 25°C, the cells are spheroidal to short-ovoidal (3-8.5) x (3-20) ^m, and single or in groups. A sediment and a white, wrinkled, creeping pellicle are formed. Growth on YM agar: After one month at IT^'C, the streak culture is yellow to yellowish-brown, dull or semiglistening, and smooth with a sinuous margin. Dalmau plate culture on corn meal agar: A primitive pseudomycelium is formed that consists of short elongated cells.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + V

+

-

+ + + V

+ + V

V V V

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + + + + + + + + w, + +

-

+

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 10% NaCl/5% glucose + 5-Keto-D-gluconate v Starch formation Saccharate Growth at 37°C + Co-Q: 9 (minor component 8) (Yamada et al. 1976b, Billon-Grand 1987). Mol% G + C: 33.2-33.3, 4 strains (Price et al. 1978); 31.7, CBS 3024 (T^: Suzuki and Nakase, unpublished data).

Supplementary description of D. vanrijiae var. yarrowii: By the addition of one strain assigned to the variety yarrowii, the description given by Kreger-van Rij (1984d) is changed as follows: Assimilation of carbon compound:

:.,J«Biiliii?.i:;

-^^^^^Mi

Fig. 57. D. uanrijiae var. vanrijiae, CBS 3024. Asci with ascospores, after one month on V8 agar at 20°C. Bar = 5 ^xm.

Trehalose w/Salicin v Melibiose Citric acid v Soluble starch v Growth at 37°C Erythritol v Mol% G + C: 33.0, CBS 6246 (BD: Price et al. 1978); 32.1, CBS 6246; 30.6, CBS 6755 (T^^: Suzuki and Nakase, unpublished data).

Origin of the strains belonging to the variety vanrijiae: Soil in South Africa, CBS 3024; exudate of slippery-elm tree, CBS 5458; anthill, CBS 6454, type strain of Debaryomyces formicarius, CBS 6455; unknown, CBS 5709, CBS 6756. Type strain: CBS 3024, isolated by van der Walt from soil in South Africa.

171

26. Debaryomyces Ladder & Kreger-van Rij Nom. Cons. / T. Nakase et al.

Origin of the strains belonging to the variety yarrowiii Excrements of insects on Paulownia imperialis in Madrid, CBS 6246; unknown, CBS 6755. Type strain: CBS 6246. Comments: Price et al. (1978) found the type strains of D. yarrowii and D. vanrijiae to show 68.4% DNA base sequence complementarity. They maintained them as separate species, whereas Kreger-van Rij (1984d) reclassified D. yarrowii as a variety of D. vanrijiae, based on the view by Kurtzman et al. (1980b) that this percentage relatedness may indicate that the two strains belong to the same species. In this study, our DNA-DNA hybridization by membrane filter method showed 74% DNA relatedness between the type strains of D. yarrowii and D. vanrijiae. A single strain, CBS 6755, which has intermediate physiological properties between the two species, showed 87% DNA relatedness to the type strain D. yarrowii and 78% DNA relatedness to the type strain of D. vanrijiae (Suzuki and Nakase, unpublished data). Based on the view of Kurtzman (1987b) that DNA relatedness of 65-70% or greater suggests strains to be conspecific in most comparisons, we accepted Kreger-van Rij's classification. Also, we assigned strain CBS 6755 to the variety yarrowii, and hence the physiological differences between the two varieties were reduced. The yariQiy yarrowii may still be distinguished from the variety vanrijiae by its inability to assimilate melibiose and lack of growth at 37°C. 26.15. Debaryomyces yamadae (van der Walt & E. Johannsen) van der Walt, M.Th. Smith & Y. Yamada (1989b) Synonyms: Debaryozyma yamadae van der Walt & E. Johannsen (1980) Debaryomyces yamadae (van der Walt & E. Johannsen) J.A. Barnett, Payne & Yarrow (1990)

Growth in YM broth: After 3 days at 25°C, the cells are spheroidal, ovoidal or ellipsoidal (1.5-5.0)x(2.0-6.0)fxm; they may be single, in pairs, short chains or in small clusters. A sediment and a slight ring are formed. Growth on YM agar: After one month at 17°C, the streak culture is cream-colored or brownish and shiny The margin is entire to undulating. Dalmau plate culture on corn meal agar: pseudomycelium is formed.

Fermentation Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

s s

Lactose Raffinose Trehalose

+ + s + + + s +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+

-

w/+ +

-

+ s

Additional assimilation tests and other characteristics:

+

-

+ +

-

+ + + + V

+ w

-

+ +

-

growth

2-Keto-D-gluconate + 10% NaCl/5% glucose v 5-Keto-D-gluconate Starch formation Saccharate Growth at SV'C Co-Q: 9 (van der Walt and Johannsen 1980). Mol% G + C: 34.5, CBS 7035; 35.7, CBS 7036 (T^: Suzuki and Nakase, unpublished data).

Origin of the strains studied: arboricolous lichen, CBS 7036. Type strain: CBS 7035.

Soil, CBS 7035;

Comments: Results from the present study are in agreement with the original description of this species, which was described as Debaryozyma yamadae by van der Walt and Johannsen. As a result of the acceptance of Debaryomyces Lodder & Kreger-van Rij nom. cons, during the International Botanical Congress (1987), the genus Debaryozyma van der Walt & Johannsen became a synonym of the genus Debaryomyces. For this reason, Debaryomyces yamadae is the valid name of this species. Debaryomyces yamadae (van der Walt & E. Johannsen) van der Wah, M.Th. Smith & Y. Yamada (1989b) has priority over Debaryomyces yamadae (van der Walt & E. Johannsen) J.A. Barnett, Payne & Yarrow (1990).

No

Formation of ascospores: Conjugation between a cell and its bud precedes ascus formation. The spores are spheroidal and warty with one to four spores per ascus. The wartiness is not always visible under the light microscope, but is detectable in a ultrathin section (van der Walt and Johannsen 1980). Ascospores were observed on YM agar and malt extract agar after 1-2 weeks at or below 20°C.

Comments on the genus Lodder and Kreger-van Rij (1978) made an official proposal for conservation of the name Debaryomyces Lodder & Kreger-van Rij against Debaryomyces Klocker. The type species of the latter, Debaryomyces globosus Klocker, had been classified in the genus Saccharomyces (van der Walt 1970d), and it is now classified in the genus Torulaspora. After publication of this proposal, van der Walt and Johannsen (1978) proposed a new

172

Vb. Descriptions of teleomorphic ascomycetous genera and species

name, Debaryozyma, for Debaryomyces species. However, in accordance with Recommendation 15A of the International Code of Botanical Nomenclature, the name Debaryomyces was applicable pending a decision on the proposal by the General Committee (Lodder and Kregervan Rij 1979). Finally, in the 1988 International Code of Botanical Nomenclature (Greuter et al. 1988), the proposal by Lodder and Kreger-van Rij was accepted. Because Schwanniomyces occidentalis has nomenclatural priority over extant species oiDebaryomyces, Kurtzman is submitting a proposal to conserve Debaryomyces against Schwanniomyces. The genus Debaryomyces Lodder & Kreger-van Rij (1952) (Kreger-van Rij 1970a, 1984d) is distinguished from other ascomycetous yeast genera by the special structure of the spore wall (wartiness), multilateral budding, inability to assimilate nitrate, coenzyme Q-9, and fermentation that is absent, weak or vigorous. All Debaryomyces species are haploid and conjugation between a cell and its bud generally precedes ascus formation. Accompanied with the transfer of Schwanniomyces occidentalis to Debaryomyces, Kurtzman and Robnett (1991) emended the diagnosis of the genus Debaryomyces as follows: Ascospores have walls with warts that may also include the presence of ridges or an equatorial ring. Fermentation is absent, weak, or occasionally vigorous. In this edition, the generic description is emended further by the inclusion of Debaryomyces udenii which has lysing asci. Kreger-van Rij and Veenhuis (1975a) described the internal ultrastructure of the spore wall of D. hansenii which is, as far as is known, also typical of the other Debaryomyces species. Spheroidal warty spores in other nitrate-negative genera, such as Torulaspora, Saccharomyces and Zygosaccharomyces, have, with the exception of Zygosaccharomyces rouxii (Kreger-van Rij 1979), a different wall structure. Issatchenkia species also have warty spores, but the asci are generally unconjugated. Saccharomyces, Zygosaccharomyces, Torulaspora and Issatchenkia differ from Debaryomyces in the number of isoprene units of the major coenzyme Q: Saccharomyces, Zygosaccharomyces, and Torulaspora, 6; Issatchenkia, 7; and Debaryomyces, 9 (Yamada et al. 1973a, 1976b, Nakase and Suzuki 1985a, Billon-Grand 1987). A proposal by van der Walt and Johannsen (1975a) to combine Debaryomyces and Torulaspora species in the genus Torulaspora was rejected by Kreger-van Rij and Veenhuis (1976b). A distinct difference in the structure of the spore wall between Debaryomyces and Torulaspora species correlates with other differences between them. Price et al. (1978) gave additional arguments for keeping Debaryomyces separate from the Torulaspora species. Kockova-Kratochvilova et al. (1978) applied numerical taxonomy to Debaryomyces species and species of the Torulaspora group. The latter were clearly distinguishable from the Debaryomyces species. Price et al. (1978) made an important study of DNA sequence relatedness among Debaryomyces and

several similar Pichia species which clarified taxonomic relations and resulted in merging of some species, e.g., D. cantarellii and D. phaffii with Pichia polymorpha to become D. polymorphus. It is noted that, with respect to its ascosporal surface structure, D. udenii is intermediate between smooth round spore-forming Pichia species possessing ubiquinone Q-9 {P. tannicola, P carsonii and P etchellsii) and other Debaryomyces species which form warty ascospores. Billon-Grand (1988, 1989 and personal communication) suggested the transfer of P abadieae, P carsonii, P etchellsii and P humboldtii to the genus Debaryomyces because they show the same major ubiquinone Q-9, similar intracellular oxidases and vitamin requirements, and produce round ascospores. Recently, Yamada et al. (1992b) reported the partial sequences of 18S and 26S ribosomal RNAs of the above four Pichia species, and suggested that P carsonii and P etchellsii have phylogenetically close relationships to Debaryomyces species and that P abadieae {= P tannicola) and P humboldtii are phylogenetically distant from each other and from P carsonii, P etchellsii and Debaryomyces species. De Hoog et al. (1986) regarded P humboldtii as a synonym of Dipodascus ingens. Consequently, it seems reasonable to transfer P carsonii and P etchellsii to the genus Debaryomyces along with emendation of the generic description to permit inclusion of species forming smooth spheroidal ascospores. By this emendation, however, wartiness of ascospores becomes less significant as a criterion for generic delimitation of the genus Debaryomyces. Species not accepted in the genus Debaryomyces tamarii Oliara & Nonomura (1954d): This species no longer forms ascospores and has several exceptional features among members of the genus Debaryomyces. Ribosomal RNA sequence comparisons by Kurtzman and Robnett (1991) showed D. tamarii to be well separated from other species of Debaryomyces. Its G + C content of nuclear DNA is much higher than that of the other Debaryomyces species (Nakase and Komagata 1971a, Price et al. 1978). We also found in this study that the assimilation of nitrate of the type strain was positive within one week after inoculation, and that its whole cell hydrolyzate contained glucose, mannose and galactose whereas those of other Debaryomyces species contained glucose and mannose (Suzuki and Nakase, unpublished data). For these reasons, this species is no longer maintained in the genus Debaryomyces. F.-L. Lee et al. (1992) and Suzuki et al. (1992) independently demonstrated that this species was conspecific with Candida versatilis based on DNA-DNA hybridization. Debaryomyces artagaveytiae Batista, Silveira & Coelho (1960): Ribosomal RNA sequence comparisons by Kurtzman and Robnett (1991) showed that strain CBS 5285 (=NRRL YB-4906) represented a species so

26. Debaryomyces Ladder & Kreger-van Rij Nom. Cons. / T. Nakase et al.

divergent that its assignment to Debaryomyces could no longer be maintained. In this study, we found strain CBS 5285 to be urease positive and DBB positive, and that it contained glucose, mannose, galactose and fucose in acid hydrolyzates. D. Yarrow (personal communication) also

173

found CBS 5285 to hydrolyze urea and to be DBB positive, and suggested a relationship with Sterigmatomyces. Furthermore, strain CBS 5285 is not the type; the type strain of this species (IMUR 2201) is not available at present.

Vb. Descriptions of teleomorphic ascomycetous genera and species

174

11. Dekkera van der Walt M.Th. Smith Diagnosis of the genus Budding cells are spheroidal, subglobose to ellipsoidal, frequently ogival, or cylindroidal to elongate. Pseudomycelium and branched, one-celled, non-septate mycelium are sometimes formed. Asci arise without conjugation, are evanescent, and form 1-4 ascospores. Ascospores are hat-shaped or somewhat spheroidal with tangential brims, and tend to agglutinate when released. Cultures are slow growing and generally short-lived. Acetic acid is produced aerobically from glucose. Fermentation is usually stimulated by molecular oxygen. An extraneous vitamin source is required. Diazonium blue B reaction is negative. Type species Dekkera bruxellensis van der Walt Species accepted 1. Dekkera anomala M.Th. Smith & van Grinsven (1984) 2. Dekkera bruxellensis van der Walt (1964) Key to species See Table 21. 1. 2(1). 3(1).

a D-Glucitol assimilated -^ 2 b D-Glucitol not assimilated —» 3 a Succinate assimilated Brettanomyces naardenensis: b Succinate not assimilated Brettanomyces nanus: Species with the following combinations of characters: a Slender, often branched, non-septate filaments are produced on Dalmau plates; lactose fermented by most strains; succinate latently assimilated by most strains; galactose assimilated Dekkera anomala: b Non-septate filaments are not produced; lactose not fermented; succinate not assimilated; galactose assimilation variable Dekkera bruxellensis: c Non-septate filaments are not produced; lactose not fermented; succinate assimilated; galactose not assimilated Brettanomyces custersianus:

p. 451 p. 452

p. 174 p. 175 p. 451

Table 21 Key characters of species in the genus Dekkera and its anamorph Brettanomyces Species

Dekkera anomala D. bruxellensis Brettanomyces custersianus B. naardenensis B. nanus

Lactose fermentation

Galactose

Assimilation Glucitol

Succinate

Non-septate filaments

V

+

-

V

+

V

~ -

Systematic discussion of the species 27.1. Dekkera anomala M.Th. Smith & van Grinsven (1984) Anamorph: Brettanomyces anomalus Custers Synonyms: Monilia vini Osterwalder (1912) Oospora vini (Osterwalder) Janke (1924) Brettanomyces anomalus Custers (1940) Brettanomyces claussenii Custers (1940) Dekkera claussenii F.-L. Lee & S.-C. Jong (1985) Torulopsis cylindrica Walters (1943) Brettanomyces claussenii Custers var. sablieri Legakis (1961) nom. inval. Brettanomyces cidri Legakis (1961)

+ +

+ +

+ +

-

_ -

Brettanomyces dublinensis Gilliland (1962) Candida beijingensis Yue & Pna (1984)

Growth in malt extract: After 5 days at 25°C, the cells are spheroidal, ellipsoidal, ogival or cylindroidal to elongate (2.0-5.5)x(3.0-22.0)^im. Cells occur singly, in pairs, short chains or clusters. Pseudomycelium is usually formed; it is filamentous, and frequently branching, but non-septate cells are also produced. A floccose to mucoid sediment is formed. Pellicle formation is absent. Growth on malt agar + 2% calcium carbonate: After 6 weeks at room temperature, the streak culture is

27. Dekkera van der Walt / M.Th. Smith

restricted, slightly raised in the center, white to creamcolored or creamish-brown, somewhat shiny to dull, and smooth or rugose. Margins are entire, lobate or fringed with mycelium. Acetic acid is produced. Dalmau plate cultures on potato-, rice- and morphology agars: After 5 days at 25°C, pseudomycelium is produced, and consists of filamentous cells that form ellipsoidal to cylindroidal blastoconidia that occur singly or in short chains. Slender, non-septate filaments are present and they are often branched (Fig. 58).

Fig. 58. D. anomala. Filaments on com meal agar after 10 days at 25°C. Bar = 25 jim (from van der Walt 1970e).

Formation of ascospores: Vegetative cells are directly transformed into evanescent asci without preceding conjugation. One to four galeate ascospores are formed per ascus and agglutinate when liberated. Ascospore formation, which may be sparse, is observed on 3% Difco malt agar after 3 weeks at IS^'C. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

Lactose Raffinose Trehalose

V

+ +

-

+

V

+ + V

V V

-

+/w

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

175

Additional assimilation tests and other growth characteristics: Starch formation 0.1% Cycloheximide v 0.01% Cycloheximide + Growth at 37°C + Co-Q: 9 (Yamada et al. 1980, Billon-Grand 1987). Mol% G + C: 38.1-41.7, 10 strains, including CBS 76, CBS 77, CBS 1947, CBS 4460, CBS 5111, CBS 7250, CBS 8138, CBS 8139 {T^: Smith et al. 1990b).

Origin of the strains studied: CBS 8139, spoiled soft drink, van Grinsven; CBS 76, beer, Kufferath, type strain of B. claussenii; CBS 77, stout, Custers, type strain of ^. anomalus; CBS 1947, beer, Walters, authentic strain of T cylindrical CBS 4210, cider, Bidan, type strain of B. cidri; CBS 4460, cider, Bidan, type strain of B. claussenii var. sablieri; CBS 4608, sherry vat, van der Walt; CBS 5111, beer, Gilliland, authentic strain of B. dublinensis; CBS 7250, apple, Yue & Pna, type strain of C. beijingensis; 4 additional strains isolated from cider (3) and spoiled soft drink (1). Type strain: CBS 8139, isolated by van Grinsven. Comments: Dekkera anomala is considered the teleomorph of Brettanomyces anomalus on the basis of its morphological and physiological resemblance (Smith and van Grinsven 1984). Smith et al. (1990b) confirmed the proposed teleomorph-anamorph relationship from enzyme comparisons and DNA reassociations, and also demonstrated the synonymy of B. cidri, B. claussenii, B. claussenii var. sablieri, B. dublinensis, Candida beijingensis and Torulopsis cylindrica v^ith Dekkera anomala. 27.2. Dekkera bruxellensis van der Walt (1964) Anamorph: Brettanomyces bruxellensis Kufferath & van Laer Synonyms: Brettanomyces bruxellensis Kufferath & van Laer (1921) Brettanomyces lambicus Kufferath & van Laer (1921) Mycotorula intermedia Krumbholz & Tauschanoff (1933) Brettanomyces intermedia (Krumbholz & Tauschanoff) van der Walt & van Kerken (1959) nom. inval. Brettanomyces intermedius (Krumbholz & Tauschanoff) van der Walt & van Kerken (van der Walt 1971) 1Brettanomyces bruxellensis Kufferath & van Laer var. lentus Custers (1940) Brettanomyces bruxellensis Kufferath & van Laer var. nonmembranaefaciens Custers (1940) Brettanomyces custersii Florenzano (1950) Brettanomyces patavinus Florenzano (1951) nom. inval, Brettanomyces bruxellensis Kufferath & van Laer var. uini Barret, Bidan & Andre (1955) nom. inval. Brettanomyces uini (Barret, Bidan & Andre) Peynaud & Domercq (1956) nom. inval. Brettanomyces schanderlii Peynaud & Domercq (1956) nom. inval. Dekkera intermedia van der Walt (1964) Brettanomyces abstinens Yarrow & Aheam (1971) Dekkera abstinens F.-L. Lee & S.-C. Jong (1986b) Dekkera lambica E-L. Lee & S.-C. Jong (1986a)

Growth in malt extract: After 5 days at 25°C, the cells are ovoidal, ellipsoidal, frequently ogival or cylindroidal to elongate (2.0-7.0)x(3.5-28.0) [im. Cells occur singly, in pairs, short chains or small clusters (Fig. 59). Pseudomycelium is usually abundantly produced. A coherent

176

Vb. Descriptions of teleomorphic ascomycetous genera and species

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Fig. 59, D. bruxellensis. Budding cells in malt extract after 5 days at 25T. Bar = 10 y^m (from van der Walt 1970b).

floccose to somewhat mucoid sediment is formed; a slight ring is usually present and sometimes a creeping pellicle. Growth on malt agar + 2% calcium carbonate: After 6 weeks at room temperature, the streak culture is usually restricted, raised, cream-colored to brownishcream, shiny, smooth, crispulate or rugose. The margin is entire, undulating, and occasionally fringed with pseudomycelium. Acetic acid is produced. Dalmau plate cultures on potato-, rice- and morphology agars: After 5 days at 25°C, pseudomycelium is usually abundantly produced under aerobic and anaerobic conditions. It consists offilamentouscells with or without blastospores, which may be arranged in chains or small somewhat branched verticils. Formation of ascospores: Vegetative cells are directly transformed into asci, which produce one to four ascospores that are hat-shaped or spheroidal with tangential brims (Fig. 60). Ascospores are liberated soon after maturation and tend to agglutinate. Sporulation is usually sparse. As mating types could not be recovered from heattreated ascosporulating material, the strains studied are presumed to be homothallic. Sporulation was observed in cultures at room temperature after 7-15 days on YM agar supplemented with vitamins.

Fig. 60. D. bruxellensis. Asci with ascospores on YM agar + vitamins after 14 days at 25°C. Bar= 10|xm (from van der Wah 1970b).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

V

+ V

V V V V

V V

V

V

-

V V

V V

V

-

n V

-

Additional assimilation tests and other growth characteristics: Starch formation 0.1% Cycloheximide v 0.01% Cycloheximide + Growth at 37T + Co-Q: 9 (Yamada et al. 1980, Billon-Grand 1987). Mol% G + C: 37.1-41.7,21 strains, including CBS 72, CBS 73, CBS 74, CBS 75, CBS 78, CBS 1943, CBS 2976, CBS 5512, CBS 6955 {T^\ Smith et al. 1990b).

Origin of the strains studied: CBS 74, Belgium stout, Custers; CBS 72, Iambic beer, Kufferath, type strain of B. bruxellensis', CBS 73, grape must, Krumbholz, type strain of M intermedia; CBS 75, Iambic beer, Custers, type strain of 5. lambicus; CBS 78, beer, Skandinavik Bryggeri Laboratory, Copenhagen, type strain of B. bruxellensis var. nonmembranaefaciens; CBS 1943, sour wine, Andre, authentic strain of B. bruxellensis var. uini; CBS 2796, sparkling wine, Peynaud, type strain of B. schanderlii; CBS 4914, tea-beer, van der Walt, type strain of Z). intermedia; CBS 5206, grape must, van der Walt; CBS 5512, equipment Bantu-beer brewery, van der Walt, type strain of B. custersii; CBS 6055, dry ginger ale, Ahearn, type strain of B. abstinens; CBS 8027, Coca Cola, Put; and 18 additional strains isolated from stout (2), wine (12), equipment beer brewery (1), porter (1), secondary fermentation (1), sherry (1). Type strain: CBS 74 (ATCC 36234) isolated by Custers. Comments: van der Walt (1964) separated D. bruxellensis and D. intermedia on the basis of morphological and physiological differences. However, Smith et al. (1990b) demonstrated by DNA complementarity and electrophoretic comparisons of enzymes, the conspecificity of D. intermedia with D. bruxellensis, the teleomorphanamorph relationship of D. bruxellensis with B. bruxellensis, and the synonymy of B. abstinens, B. custersii, B. intermedius and B. lambicus with D. bruxellensis.

27. Dekkera van der Walt / M.Th. Smith

Comments on the genus Until 1984, Dekkera was comprised of two species, D. hruxellensis and D. intermedia (van der Walt 1984a). Smith and van Grinsven (1984) described D. anomala, which they considered to be the teleomorph of B. anomalus on the basis of morphological and physiological criteria. These authors also observed the ascospores of this taxon by transmission electron microscopy. Subsequently, five more Dekkera species were described to represent the teleomorphs of five known Brettanomyces species (Lee and Jong 1985, 1986a,b, Jong and Lee 1986). From comparisons of isozyme similarities and DNA homologies. Smith et al. (1990b) accepted only two Dekkera species, viz. D. anomala and D. hruxellensis with D. intermedia as its synonym. Smith et al. (1990b) considered the reported ascospores (Lee and Jong 1985, 1986a,b, Jong and Lee 1986) as artifacts and did not accept D. custersianus and D. naardenensis. In addition, D. abstinens and D. lambica were placed in synonymy with D. hruxellensis, and D. claussenii was considered a synonym of D. anomala. This species concept was supported by the results of restriction analysis of genes coding for rRNA by Molina et al. (1993). Various mtDNA-based analyses have been performed. McArthur and Clark-Walker (1983) examined nine Dekkera/Brettanomyces species and reduced the number to six on the basis of similarities in restriction enzyme

111

digestion patterns, i.e., D. hruxellensis (B. lamhicus), D. intermedia, B. custersii (B. ahstinens), B. anomalus (B. claussenii), B. custersianus and B. naardenensis. In subsequent studies in which Eeniella nana was included, both the gene order (Hoeben and Clark-Walker 1986) and the nucleotide sequence of the mitochondrialencoded cytochrome oxidase subunit gene (C0X2) were determined (Clark-Walker et al. 1987, Hoeben et al. 1993). From these data, the preceding authors recognized five species, D. hruxellensis (D. intermedia), B. custersii, B. anomalus, B. custersianus and B. naardenensis. They also concluded that either E. nana should be included in Brettanomyces or B. naardenensis should be excluded from this genus. From comparisons of partial sequences of 26S rDNA, Boekhout et al. (1994) accepted D. hruxellensis, D. anomala, B. naardenensis and B. custersianus, as well as E. nana, in Brettanomyces. The taxonomic position of B. custersii, considered conspecific with B. hruxellensis by Smith et al. (1990b), remained unsettled. Yamada et al. (1994d) studied the phylogeny of the four Dekkera species based on partial sequences of 18S and 26S rRNAs. These authors concluded that D. custersiana was phylogenetically distant from D. hruxellensis (B. hruxellensis), D. anomala (B. anomalus) and D. naardenensis. However, they postponed introduction of a new genus for this species until ascospore formation is confirmed.

Vb. Descriptions of teleomorphic ascomycetous genera and species

178

28. Dipodascopsis Batra & P. Millner M.Th. Smith and G.S. de Hoog Diagnosis of the genus Colonies are whitish, moist, somewhat sHmy; true hyphae are present; arthroconidia are absent; multilateral budding cells are sometimes present. Asci are acicular or cylindrical, and formed laterally on hyphae after fusion of gametangia. Asci have persistent walls, and open by rupture at the apex. Ascospores are 32-128 per ascus, hyaline, ellipsoidal to reniform, and with a smooth wall and without a slime sheath. Fermentation is absent. Extracellular starch is produced. Diazonium blue B reaction is negative. Coenzyme Q-9 system is present. Cell walls are multilamellar. Septa have narrow pores. Type species Dipodascopsis uninudeata Batra & P. Millner Species accepted 1. Dipodascopsis tothii (Zsolt) Batra & P. Millner (1978) 2. Dipodascopsis uninudeata (Biggs) Batra & P. Millner (1978) a. Dipodascopsis uninudeata (Biggs) Batra & P. Millner var. uninudeata (1974) b. Dipodascopsis uninudeata var. wickerhamii Kreger-van Rij (1974) Key to species See Table 22. 1. 2(1).

a Cellobiose and lactose assimilated b Cellobiose and lactose are not assimilated a Sucrose and raffinose assimilated b. Sucrose and raffinose are not assimilated

D. tothii:

p. 178

—> 2 D. uninudeata var. uninudeata: p. 179 D. uninudeata var. wickerhamii: p. 179

Table 22 Key characters in the genus Dipodascopsis Species

Assimilation^ Arb

Dipodascopsis tothii D. uninudeata var. uninudeata D. uninudeata var. wickerhamii

Rha

+

Sue

Cel

Sal

+ +

+

+

+

Mel

Ascus ^ Lac

Raf

Inu

+

+ +

+ +

+ +

2>T + +

bipod inter inter

^ Abbreviations: Arb, arbutin; Rha, L-rhamnose; Sue, sucrose; Cel, cellobiose; Sal, salicin; Mel, melibiose; Lac, lactose; Raf, raffinose; Inu, inulin; bipod, bipodal; inter, intercalary.

Systematic discussion of the species

Fermentation: absent.

28.1. Dipodascopsis tothii (Zsolt) Batra & P. Millner Assimilation: (Batra 1978) Glucose

Synonym: Dipodascus tothii Zsolt (1963)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 4 mm in diameter, cream-colored, moist, and slimy. Budding cells are absent. Hyphae are firm with inflated cells and strongly amyloid. Arthroconidia are absent. Formation of ascospores: Gametangia are formed laterally on hyphae as curved branches; asci arise after fiision of a terminal cell with its penultimate cell. Asci are acicular, 50-100 jim long, and contain 30-120 ascospores. Asci open by rupturing at the apex. Ascospores are subhyaline to hyaline, broadly ellipsoidal, occasionally bean-shaped, 1.0x(1.5-2.0)jim, and without a slime sheath (Fig. 61). The species is homothallic.

Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + +

-

+ + + + + + +

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+ 4-

+ + V

-

w

-

+ n

-

28. Dipodascopsis Batra & P. Millner / M.Th. Smith and G.S. de Hoog

179

Ultrastructure of ascosporogenesis was studied extensively by Curry (1985). He stressed the presence of vesicles surrounding each spore-initial which is in contrast to the ascus vesicles known in the Euascomycetes. Van der Walt et al. (1990a) demonstrated the presence of the siderophores ferrichrome-C and a hitherto unidentified ferrichrome in D. tothii. 28.2. Dipodascopsis uninudeata (Biggs) Batra & P. Millner (Batra 1978) This species has two varieties: Dipodascopsis uninudeata (Biggs) Batra & P. Millner var. uninudeata (1974) Synonym: Dipodascus uninucleatus Biggs (1937)

Dipodascopsis uninudeata var. wickerhamii Kregervan Rij (1974) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22''C, colonies are 4 mm in diameter, cream-colored, moist and slimy. Budding cells are sparse, spheroidal and thick-walled. Newly formed cells break through the parent cell wall and develop in more or less sympodial order. Hyphae are firm, with inflated cells, and produce abundant extracellular amyloid material. Arthroconidia are absent.

Fig. 61. D. tothii, CBS 759.85. Asci in various stages of maturation; liberated ascospores. MEA, 2 weeks, 20°C.

Additional assimilation tests and other growth characteristics:

Xylitol + L-Arabinitol + Arbutin + Cadaverine + + L-Lysine Ethylamine w Co-Q: Not determined. Mol% G + C: Not determined.

50% Glucose 60% Glucose 0.1% Cycloheximide Glucono-6-lactone Acetic acid production Growth at 37°C

Origin of the strain studied: CBS 759.85 (NRRL Y-12690), from a cutting of beech (Fagus syluatica), Hungary, Zsolt. Type strain: CBS 759.85, from wood. Comments: In contrast to D. uninudeata, gametangia of D. tothii extend from the hyphae which results in the formation of bipodal asci similar to those known in Dipodascus. The amyloid cell walls, absence of arthroconidia and extremely small ascospores lacking slime sheaths justify the classification of D. tothii in Dipodascopsis. Cells are uninucleate (Zsolt 1963). Ascospores become spheroidal after maturation, but fiirther inflation and occasional budding, as seen in D. uninudeata, remain absent.

Formation of ascospores: Gametangia are undifferentiated adjacent cells or hyphal tips which fiise. Asci are produced laterally on the hyphae. Asci are acicular, 100-130 |im long and contain 30-120 ascospores. Asci open by rupturing at the apex. Ascospores are hyaline or subhyaline, ellipsoidal to bean-shaped, (0.8-1.2) x (2.02.8) |im, and without a slime sheath (Fig. 62). The species is homothallic. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+ + +

-

+

-

+ + + + + + + +/w

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+ + +

V

-

+ n

-

180

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

Xylitol + L-Arabinitol + Arbutin Cadaverine + L-Lysine + Ethylamine w Co-Q: Not determined. Mol% G + C: Not determined.

50% Glucose 60% Glucose 0.1% Cycloheximide Glucono-8-lactone Acetic acid production Growth at 37T

Supplementary description of D. uninucleata van wickerhamii: The variety wickerhamii does not assimilate sucrose, raffinose and inulin but assimilates Lrhamnose. Origin of the strains studied belonging to the variety uninucleata: CBS 190.37, from dead pupa of a fruit fly (Drosophila melanogaster), Canada, Biggs; CBS 740.74 (NRRL Y-1268), from fruit fly, Mrak. Type strain: CBS 190.37, from pupa. Origin of the strain studied belonging to the variety wickerhamii: CBS 741.74 (NRRL Y-2181), from fruit fly (Drosophila melanogaster), Phaff Type strain: CBS 741.74, from fruit fly Comments: The most recent description was that given by Kreger-van Rij (1974). She attributed the binomial to Batra & Millner in an article cited as "in press" but actually it was published four years later. Consequently, the validation of Dipodascopsis should probably be attributed to Kreger-van Rij (1974). Kreger-van Rij (1974) noted that assimilation of soluble starch was variable, while D-mannitol and D-glucitol growth reactions were recorded as negative. Budding cells are sparse. They arise from ascospores and are often found within the ascus. Liberated spores become thick-walled, occasionally form a few yeastlike cells but more often germinate with hyphae. Ascospores and hyphal cells are uninucleate (Biggs 1937). Hyphae bear hairy capsules and have multilamellar cell walls; septa are perforated by narrow, central canals with rounded edges (Kreger-van Rij and Veenhuis 1974). Van der Walt et al. (1990a) demonstrated the presence of ferrichrome as the main type of hydroxamate siderophores.

Fig. 62. D. uninucleata var. uninucleata, CBS 190.37. Ascus containing ascospores; liberated ascospores swell, become thick-walled prior to germination and occasionally form yeastlike cells. MEA, 2 weeks.

Comments on the genus The taxonomic position of the genus Dipodascopsis is close to Lipomyces as discussed by Cottrell and Kock (1989), who used the presence of linolenic acid as a marker. Mitochondrial DNAs of D. uninucleata and other members of the Lipomycetaceae were compared by Lodolo et al. (1990); restriction patterns were found different in each genus.

181

29. Dipodascus de Lagerheim / G.S. de Hoog, M.Th. Smith and E. Gueho

29. Dipodascus de Lagerheim G.S. de Hoog, M.Th. Smith and E. Gueho Diagnosis of the genus Colonies are white or cream-colored, farinose or hairy, and usually dry; hyphae are hyaline, mostly disarticulating into rectangular arthroconidia (anamorph genus Geotrichum). Asci are acicular, cylindrical, ellipsoidal or subglobose, formed after fusion of gametangia located laterally on hyphae. Septa have micropores. Asci have persistent walls and open by rupture at the apex. Ascospores are 4-128 per ascus, hyaline, ellipsoidal, with smooth walls and surrounded by regular slime sheaths. Fermentation is mostly absent. Extracellular starch is not produced. Diazonium blue B reaction is negative. Type species Dipodascus albidus de Lagerheim Species accepted 1. Dipodascus aggregatus Francke-Grosmann (1952) 2. Dipodascus albidus de Lagerheim (1892) 3. Dipodascus ambrosiae de Hoog, M.Th. Smith & Gueho (1986) 4. Dipodascus armillariae W. Gams (1983) 5. Dipodascus australiensis von Arx & Barker (1977) 6. Dipodascus capitatus de Hoog, M.Th. Smith & Gueho (1986) 7. Dipodascus geniculatus de Hoog, M.Th. Smith & Gueho (1986) 8. Dipodascus ingens Rodrigues de Miranda ex de Hoog, M.Th. Smith & Gueho (1997) 9. Dipodascus macrosporus Madelin & Feest (1982) 10. Dipodascus magnusii (Ludwig) von Arx (1977) 11. Dipodascus ovetensis (Pelaez & C. Ramirez) von Arx (1977) 12. Dipodascus spicifer de Hoog, M.Th. Smith & Gueho (1986) 13. Dipodascus tetrasperma (Macy & M.W. Miller) von Arx (1977) Key to species See Table 23. Morphological key (also see under Geotrichum)'. 1. 2(1). 3(1). 4(3). 5(4). 6(5).

a b a b a b a b a b a

b 7(3). a b 8(7). a b 9(8). a b 10(9). a b 11(10). a b 12(9). a b

Asci acicular or long-cylindrical, with a narrow apex —^ 2 Asci usually globose or ellipsoidal; when cylindrical, with a broadly rounded apex —> 3 Asci and ascospores cylindrical D. macrosporus: Asci subulate; ascospores ellipsoidal D. albidus: Asci 1-4-spored -^ 7 Asci containing more than 4 spores -^ 4 Asci cylindrical, up to 120 |im long, in rather dense groups, containing up to 30 ascospores; insect symbiont D. aggregatus: No combination of the above characters —» 5 Ascospores (2.8-3.2)x(3^)[xm; asci asymmetrically bipodal, somewhat tapering towards the tip D. geniculatus: Ascospores larger; asci cylindrical to ellipsoidal -^ 6 Asci mostly in groups, broadly ellipsoidal, mostly present in culture; on rotting parts of tropical or subtropical succulents D. australiensis: Asci solitary, rather irregular in shape, not formed in culture; on carpophores of Armillaria in temperate zone D. armillariae: Asci borne on erect or suberect hyphae, anisogamous; ascospores (5.0-6.5)x(8.5-11.0) [im D. magnusii: Asci borne on undifferentiated hyphae, isogamous; ascospores smaller -^ 8 Asci usually longer than wide -^ 9 Asci appressed, usually shorter than wide; hyphae straight and stiff, 7-9 fxm wide, with acuminate apices . . D. tetrasperma: Sympodial rachides abundant -^ 12 Sympodial rachides absent or scarce -^ 10 Initial growth with pseudomycelium -^11 Initial growth with true hyphae D. ambrosiae: Thallus entirely pseudomycelial D. ingens: Thallus initially pseudomycelial, changing into true hyphae D. ovetensis: Branching regular, often verticillate; rachides straight; on warm-blooded animals D. capitatus: Branching rather irregular; rachides flexuose; on rotting parts of tropical or subtropical succulents D. spicifer:

Physiological and morphological key, see under Geotrichum

p. 189 p. 183 p. 182 p. 187 p. 185 p. 184 p. 189 p. 192

p. p. p. p. p.

184 188 190 186 191

Vb. Descriptions of teleomorphic ascomycetous genera and species

182

Table 23 Key characters of species in the genus Dipodascus Species

Assimilation

Hyphae^ Asci''

Rachides'^ Mating system

Maltose Cellobiose Raffinose D-Xylose Glucitol Salicin Citrate Dipodascus aggregatus

+

Cylindrical

Homothallic

D. albidus

+

Acicular

Homothallic

D. ambrosiae

+

Ellipsoidal

-

Homothallic

D. armillariae

+

Cylindrical

-

?

D. australiensis

+

Cylindrical

V

Homothallic

D. capitatus

+

Ellipsoidal

+

Heterothallic

D. geniculatus

+

Cylindrical

-

Homothallic

D. ingens

-

Ellipsoidal

-

Heterothallic

D. macrosporus

+

Tubular

-

Homothallic

D. magnusii

+

Ellipsoidal

-

Homothallic

D. ovetensis

+

Ellipsoidal

-

Homothallic

D. spicifer

+

D. tetrasperma

-

+

+

+

Ellipsoidal

+

Homothallic

+

-

+

+

Ellipsoidal

-

Homothallic

^ Presence of hyphae. ^ Shape of asci. ^ Sympodial rachides present.

Systematic discussion of the species 29.1. Dipodascus aggregatus Francke-Grosmann (1952) Synonym: Dipodascus albidus de Lagerheim var. minor Korf (1957)

Growth on 4% malt extract/0.5% yeast extract agar (MEYA): After 10 days at 20-22°C, colonies are 25 mm in diameter, glassy whitish, with a hispid center and smooth margin. Expanding hyphae are parallel, flexuose, 6-8 [im wide, with some basitonous branching; lateral branches are 3-5 |im wide, disarticulating into rectangular arthroconidia which are (2.6-5.0)x(6-10) fxm, and that soon intermingle with larger conidia from main branches. Formation of ascospores: Hyphae locally become densely septate and form clusters of isogamic gametangia. Asci are aggregated in small groups, cylindrical with rounded apex, (7-10)x(40-120)|im, mostly with 1030 ascospores which are liberated by apical rupture of the ascus. Ascospores are subhyaline, broadly ellipsoidal, (3.0-4.5)x(3.8-6.0)^im, with a slime sheath 1.2-1.6[xm thick (Fig. 63). The species is homothallic. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

-

V

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

-

+

-

+ +

V

+ +

-

n

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 3 7°C Arbutin Co-Q: Not determined. Mol% G + C: 45.4-45.8, CBS 152.57, CBS 284.86 (BD: Gueho et al. 1985).

Origin of the strains studied: CBS 175.53, from pupal galleries of bark-beetle Ips acuminatus in pine (Pinus

183

29. Dipodascus de Lagerheim / G.S. de Hoog, M.Th. Smith and E. Gueho

Formation of ascospores: Gametangia are mostly identical, and mostly formed on opposite sides of a septum. Asci are slightly swollen at the base, then tapering, acicular, 180-380 |im long, with narrow apical opening to release the spores. Ascospores are up to 128 per ascus, hyaline or subhyaline, broadly ellipsoidal, (1.21.8)x(1.8-3.2)jim, and with a slime sheath 0.5-1.0|im thick (Fig. 64). The species is homothallic. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

-

+ +

-

+ +

-

n

-

^oOo\ Fig. 63. D. aggregatus, CBS 175.53. Asci with ascospores; anamorph composed of hyphae disarticulating into arthroconidia. MEYA, 22''C.

sylvestris), Francke-Grosmann, Sweden; from frass oi Ips in pine (Pinus sp.) roots (1); from slime flux of pine {Pinus sp.) attacked hy Ips {\) ox Dendroctonus (1); from unknown source (2). Lectotype strain: CBS 175.53. Comments: The species is obligately associated with bark beetles behind the bark of Pinus (Batra 1967). D. aggregatus is recognized by its broadly cylindrical asci with dome-shaped apices. Asci are easily produced on most routine media. The species was recently redescribed by Tsuneda (1987, 1989). 29.2. Dipodascus albidus de Lagerheim (1892) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 30 mm in diameter, white, farinose, and finally hispid. The reverse is whitish. Expanding hyphae are parallel, 6-8 [im wide, poorly branched, with little differentiation of main branches, and soon disarticulate into rectangular arthroconidia.

Fig. 64. D. albidus, CBS 766.85. Acicular asci liberating ascospores and hyphae disarticulating into arthroconida. MEYA, 22°C.

184

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

ellipsoidal, (3^)x(4.5-5.5) |im, and with a slimy sheath 1-2 jim thick (Fig. 65). The species is homothallic.

2-Keto-D-gluconate Growth at 3 7"C Arbutin Co-Q: Not determined. Mol% G + C: 41.9, CBS 766.85 {T^: de Hoog et al. 1986).

Fermentation: absent.

Origin of the strain studied: CBS 766.85 (IFO 1984), from exudate of a broadleaf tree, Nakase, Japan. Neotype herbarium specimen: CUP 20140, Juel. Comments: This very characteristic species is restricted to exudates of deciduous trees. There is some morphological resemblance to species of Dipodascopsis, but these have curved ascospores and produce extracellular starch. 29.3. Dipodascus ambrosiae de Hoog, M.Th. Smith & Gueho (1986) Growth on 4% malt extract/0.5% yeast extract agar: Colonies after 10 days are 13 mm in diameter, whitish, buttery, somewhat moist, smooth, with finely lobed margins. Hyphae arise bilaterally from ends of inflated cells, straight, without differentiation of main and lateral branches, mostly 2.5-3.5 |im wide, disarticulating into rectangular cells up to 20 |im long; liberated conidia often percurrently proliferate at their ends. Formation of ascospores: Gametangia are formed on different hyphae or at opposite sides of hyphal septa. Asci are broadly ellipsoidal, (6-7)x(10-13)|im, and contain 2-4 ascospores. Ascospores are hyaline or subhyaline.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

V

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

-

+ +

-

V

-

+ +

-

+ +

-

n

-

growth

2-Keto-D-gluconate Growth at 2>TC Arbutin Co-Q: Not determined. Mol% G + C: 45.2, CBS 749.85 (7;^: de Hoog et al. 1986).

Origin of the strain studied: CBS 749.85 (BPI 3528), from insect tunnel, Batra, California. Type strain: CBS 749.85. Comments: The species is only known from the type locality. It might be one of the bark insect-associated species, but is clearly distinguished from D. aggregatus by small asci and a different hyphal structure. In these respects it is much more similar to D. ovetensis, but has considerably smaller asci and ascospores. 29.4. Dipodascus armillariae W. Gams (1983) Anamorph: Geotrichum decipiens (L.R. Tulasne & C. Tulasne) W. Gams Synonyms: Hypomyces decipiens L.R. Tulasne & C. Tulasne (1865) Geotrichum decipiens (L.R. Tulasne & C. Tulasne) W. Gams (1983) Geotrichum armillariae von Arx (1977a)

Fig. 65. D. ambrosiae, CBS 749.85. Early development of hyphae and mature hyphae with terminal and intercalary arthroconidia. Some asci have liberated their ascospores. MEYA, 22°C.

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 2 0 - 2 2 T , colonies are 2 0 30 mm in diameter, white, dry, and centrally powdery to velvety. Expanding hyphae are loose, with irregular basitonous branching at acute angles; hyphae are 3.55.5 |im wide, with little differentiation between main and lateral branches, and soon disarticulate into rectangular arthroconidia (3.5-4.2)x(7-18) (im. Pale brown, thick-walled, subglobose chlamydospores measuring (1216)x(13-17)|i-m are often present. Formation of ascospores: Gametangia are formed only on the natural substrate, and located on opposite sides of

29. Dipodascus de Lagerheim / G.S. de Hoog, M.Th. Smith and E. Gueho

185

Origin of the strains studied: CBS 817.71 (ATCC 36758), on gills of mushroom (Armillaria sp.), van der Aa, Netherlands; 9 additional strains from gills of the Armillaria mellea aggregate. Type strain: CBS 817.71. Comments: The species is thus far only known from carpophores oi Armillaria species in the Northern hemisphere. Asci are only produced on the natural substrate during a short period in October. Single-spore isolations invariably gave the Geotrichum anamorph with characteristic chlamydospores (de Hoog et al. 1986). The species has often been confused with Endomyces decipiens Reess, but that species has hat-shaped ascospores. Nomenclatural separation of the two unrelated taxa was discussed by Gams (1983). 29.5. Dipodascus australiensis von Arx & Barker (von Arx 1977a)

Fig. 66. D. armillariae. Asci on natural substrate, CBS-H 3348; hyphae disarticulate into arthroconidia, CBS 540.76, MEYA, 22T; chlamydospores, CBS 817.71, MEYA, 22*'C.

hyphal septa. Asci are broadly ellipsoidal to cylindrical, (7-10)x(17-28)|im, and contain 4-12 ascospores. Ascospores are ellipsoidal, (2.5-4.0) x (4-6) |im, with a slime sheath (Fig. 66). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37''C Arbutin Co-Q: Not determined. Mol% G + C: 42.2^2.3, CBS 834.71, CBS 540.76 (BD: Gueho et al. 1985).

Grow^th on 4% malt extract/0.5% yeast extract agar: Colonies, after 10 days at 20-22°C, are 3060 mm in diameter, white, evenly felty to fluffy, and with a straight margin. Expanding hyphae locally with dichotomous branching, main branches 4-7 [im wide, basitonously branched at acute angles, lateral branches 3-4 ^m wide, and soon disarticulate into rectangular arthroconidia (3.5-5.5)x(6-12) [im. Formation of ascospores: Equal gametangia are formed on opposite sides of septa; asci are subglobose to broadly clavate, (6-11)x(l5-45) jim, with mostly 412 ascospores. Ascospores are subhyaline, ellipsoidal, often unilaterally flattened, (2.5^.0) x (4-6) jim, and with a slime sheath 1.2-1.6 [im thick (Fig. 67). The species is homothallic. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + V + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Vb. Descriptions of teleomorphic ascomycetous genera and species

186

grow at 37''C. The two species clearly differ in their ecological preferences. 29.6. Dipodascus capitatus de Hoog, M.Th. Smith & Gueho (1986) Anamorph: Geotrichum capitatum (Diddens & Lodder) von Arx Synonyms: Trichosporon capitatum Diddens & Lodder (1942) Geotrichum capitatum (Diddens & Lodder) von Arx (1977a) Ascotrichosporon capitatum (Diddens & Lodder) KockovaKratochvilova, Slavikova, Zemek & Kuniak (1977b) Blastoschizomyces capitatus (Diddens & Lodder) Salkin, Gordon, Samsonoff & Rieder (1985) Sporotrichum spicatum Delitsch (1943) Geotrichum linkii Voros-Felkai (1961) Blastoschizomyces pseudotrichosporon Salkin, Gordon, Samsonoff & Rieder (1985)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 1520 mm in diameter, glassy, later funiculose with a smooth expanding zone. Expanding hyphae are branched at acute angles, often somewhat penicillate, main branches up to 7.0 |im wide, lateral branches 2.5-3.5 pim wide and terminate in cylindrical conidiogenous cells with long, cicatrized rachides 2.5 (im wide. Conidia are clavate, with a truncate base, (2.5-3.5)x(7-10)|im. Arthroconidia are also common.

lOjitm Fig. 67. D. australiensis. Branching pattern of expanding hyphae with hyphae disarticulating into arthroconidia, CBS 666.79; asci liberating ascospores, CBS 666.79, MEYA, 22*'C.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37*'C + Arbutin Co-Q: Not determined. Mol% G + C: 39.9^0.2, CBS 625.74, CBS 666.79 {T^: de Hoog et al. 1986).

Origin of the strains studied: CBS 625.74, from rotting cladodes of cactus Opuntia inermis, Barker, Australia; from necrosis in Opuntia (2); from Euphorbia (1). Type strain: CBS 625.74. Comments: The species is restricted to rotten fruits and leaves of succulents in desert areas. Asci are easily produced on routine laboratory media. They are sometimes formed in small clusters at hyphal septa, and then there is much similarity to poorly developed cultures of D. aggregatus. However, D. australiensis has local, dichotomously branched, expanding hyphae and much basitonous branching, leading to geniculate side branches after hyphae have disarticulated. In addition, D. australiensis is unable to assimilate citrate, but does

Formation of ascospores: Gametangia are formed at opposite sides of septa. Asci are subspherical to broadly ellipsoidal, (7-9)x(7-ll)|im. Ascospores are hyaline, ellipsoidal, (2.5-3.2)x(5.5-6.5) (Jim, and with a persistent slime sheath 1-2 (im thick (Fig. 68). The species is heterothallic. Ascospores are observed on vitamin-enriched V8 medium. Sporulation is sparse. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

V

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

-

+ + V

-

n

-

187

29. Dipodascus de Lagerheim / G.S. de Hoog, M.Th. Smith and E. Gueho

of immunocompromised hosts, particularly in cases of leukemia. 29.7. Dipodascus geniculatus de Hoog, M.Th. Smith & Gueho (1986) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22'^C, colonies are 35 mm in diameter, white, flat, with fimbriate margin. Hyphae are stiff, branched at acute angles, 3-5 jim wide. Arthroconidia are absent. Formation of ascospores: Gametangia are unequal and formed on opposite sides of septa; hyphae are often bent at the septa. Asci are broadly cylindrical to ellipsoidal, with a rounded apex and a strongly asymmetric base, (6-10)x (25-65) [xm, and usually contain about 20 ascospores. Ascospores are subhyaline, broadly ellipsoidal, (2.8-3.2)x(3-4)|im, with a slime sheath 0.5 ^im thick (Fig. 69). The species is homothallic. Fermentation: Glucose Galactose Sucrose

Fig. 68. D. capitatus. Conidial apparatus with sympodial rachides, sympodial conidia, arthroconidia and endoconidia, various cultures. MEYA, 22''C.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 1>TC Arbutin Co-Q: 9 (Yamada et al. 1982). Mol% G + C: 32.3-36.3 (7;^: Gueho et al. 1987a).

+

Origin of the strains studied: CBS 571.82 (CBS 2364, ATCC 10663), from wood pulp factory with an air-tight warming system, Rennerfeldt, lectotype strain of Trichosporon capitatum; CBS 578.82, from sputum, authentic strain of Geotrichum Hnkii, do Carmo-Sousa; CBS 207.83 (ATCC 46132), from sputum, type strain of Blastoschizomycespseudotrichosporon, Salkin, U.S.A.; from wood pulp (2); sputum (5); bovine mastitic milk (1); yeast cake (1); oral infections (2); digestive tract of swine (1); blood (2). Complementary mating types: CBS 197.35 and 580.82. Type strain: CBS 197.35x580.82. Comments: Asci with ascospores are found in very low abundance on nutritionally rich media. They need several weeks to fully mature. A characteristic feature of D. capitatus is the sympodially produced conidia which are cylindrical to clavate, with truncate base and rounded apex. Arthroconidia are rare in this species. The species is associated with human lung disorders. Recently it is increasingly being found in blood

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

w/-

-

+ + +

-

+

-

+ +

-

Maltose Lactose Raffinose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

-

+ +

-

+ + +

-

n

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37°C Arbutin Co-Q: Not determined. Mol% G + C: 43.2, CBS 184.80 (T;^: de Hoog et al. 1986).

Origin of the strain studied: CBS 184.80, from Psidium guajava pulp, Bhide, India. Type strain: CBS 184.80.

188

Vb. Descriptions of teleomorphic ascomycetous genera and species

Fermentation: Glucose Galactose Sucrose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Fig. 69. D. geniculatus, CBS 184.^ ascospores. MEYA, 22*'C.

w/-

Maltose Lactose Raffinose

-

+ +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

-

V

-

-

+ +

-

n

-

+

Gametangia, asci and liberated

Comments: The species, thus far only known from the type strain, can be recognized by absence of arthroconidia and by strongly asymmetric asci formed at the edges of kinks in supporting hyphae. Asci are produced in relative abundance on oatmeal agar, but only poorly on most other media. The species differs from D. australiensis by absence of arthroconidia, absence of growth at 37°C and by growth with maltose. 29.8. Dipodascus ingens Rodrigues de Miranda ex de Hoog, M.Th. Smith & Gueho (1997a) Anamorph: Geotrichum ingens (van der Walt & van Kerken) de Hoog, M.Th. Smith & Gueho Synonyms: Candida ingens van der Walt & van Kerken (1961c) Geotrichum ingens (van der Walt & van Kerken) de Hoog, M.Th. Smith & Gueho (1997a) Pichia humboldtii Rodrigues de Miranda & Torok (1976)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 12 mm in diameter, glassy white, butyrous, smooth. The reverse is whitish. Hyphae are pseudomycelial, consisting of rounded-off cells of variable shape which are gradually narrower towards the distal end. Arthroconidia are cylindrical to ellipsoidal, and of variable size. Formation of ascospores: Gametangia are mostly formed on different hyphae. Asci are broadly ellipsoidal, (10-17)x(12-20)|im, and contain 2-A ascospores. Ascospores are hyaline or subhyaline, ellipsoidal, (3.04.5)X (5.5-7.0) |im, and with a slime sheath 1-3 (im thick (Fig. 70). The species is heterothallic.

Q)

^,^

Fig. 70. D. ingens. Pseudomycelial anamorph, CBS 7197, MEYA; asci with ascospores, CBS 7197x4827 and CBS 7197x4825, enriched V8, 22T.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37°C Arbutin Co-Q: Not determined. Mol% G + C: 39.5, CBS 4603 {T^: de Hoog et al. 1986).

v

29. Dipodascus de Lagerheim / G.S. de Hoog, M.Th. Smith and E. Gueho

189

Origin of the strains studied: CBS 4603 (ATCC 60122, IFO 10057) type strain of Candida ingens; CBS 4827 and 2 additional strains, all from a wine cellar, van der Walt, South Africa; CBS 7197, Hoefer; from industrial sulphite waste (1); from phenolic waste water (1); from asphalt waste (1). Complementary mating types: CBS 7197 and CBS 4827. Type strain: CBS 7197x4827.

Additional assimilation tests and other growth characteristics:

Comments: Judging from the list of sources of this fungus, there appears some preference for phenolic compounds. The species has been described as a supposedly homothallic species, Pichia humboldtii Rodrigues de Miranda & Torok (1976), but with the discovery of heterothallism in this species, the earlier results were interpreted as endoconidia. The species is close to D. ouetensis; for differential diagnosis see under that species.

Comments: This rare, homothallic species found on myxomycete thalli is easily recognizable by the absence of arthroconidia on agar media and the presence of terminal, cylindrical asci with subcylindrical ascospores. Arthroconidia may be formed in shaken liquid culture. Another mycoparasitic Dipodascus species is D. armillariae. This species occurs on Agaricales and forms its ellipsoidal asci only on natural substrates. Its anamorph is characterized by the presence of large, brown chlamydospores.

2-Keto-D-gluconate Growth at 2>TC Arbutin Co-Q: Not determined. Mol% G + C: 41.5, CBS 259.82 {T^\ de Hoog et al. 1986).

Origin of the strains studied: CBS 259.82 (IMI 263027) and an additional strain, both from the myxomycete Badhamia utricularis, Madelin and Feest, U.K. Type strain: CBS 259.82.

29.9. Dipodascus macrosporus Madelin & Feest (1982) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 5 mm in diameter, whitish, buttery, composed of minute, confluent satellite colonies, and become somewhat cerebriform. Expanding hyphae are 3.5-6.5 |im wide, branched at acute angles, and without differentiation of main branches. Formation of ascospores: Terminal hyphal cells become cylindrical asci after fertilization at the base by adjacent hyphae. Asci are cylindrical, about 80jJLm long, contain 10-30 uniseriate ascospores, and open by rupture at the apex. Ascospores are hyaline or subhyaline, cylindrical to ellipsoidal, (2.5-3 .2)x(6-8) |im, and with a slime sheath 1.2-2.0 jim thick (Fig. 71). The species is homothallic. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Fig. 71. D. macrosporus, CBS 259.82, MEYA, 2TC. Tubular asci with ascospores and pseudomycelial hyphae.

29.10. Dipodascus magnusii (Ludwig) von Arx (1977a) Anamorph: Geotrichum ludwigii (Hansen) Fang, Cheng & Chu Synonyms: Endomyces magnusii Ludwig (1886) Magnusiomyces ludwigii Zender (1925a) Geotrichum ludwigii (Hansen) Fang, Cheng & Chu (1966) Magnusiomyces magnusii (Ludwig) Zender (1925b) Endyllium magnusii (Ludwig) Clements (Clements & Shear 1931)

Vb. Descriptions of teleomorphic ascomycetous genera and species

190

Oospora magnusii Stautz (1931) Oidium ludwigii Hansen (Holtz 1901) Oospora ludwigii (Hansen) P. Saccardo & D. Saccardo (1906) Geotrichum ludwigii (Hansen) Saez (1968a)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 25 mm in diameter, glassy white, buttery; the margin is smooth and strongly lobed. Expanding hyphae are stiff; main branches are 7-12 |im wide, branched at acute angles in a penicillate manner, lateral branches are 4-7 fxm wide, and soon disarticulate into rectangular arthroconidia (47)x(10-18)(im which often show some annellations at one or both ends. Formation of ascospores: Gametangia are formed on the ends of side branches, an anisogamous, terminal cell being connected by a tube originating from a few cells further down. Asci are broadly ellipsoidal, (916)x(17-30)|im, containing 4 ascospores. Ascospores are subhyaline, ellipsoidal, (5.0-6.5)x(8.5-11.0) ^m, and have a slime sheath 1.2-2.5 |im thick (Fig. 72). The species is homothallic. Ascospores are observed on vitamin-enriched V8 medium. Fermentation: Glucose Galactose Sucrose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w +

Maltose Lactose Raffinose

-

+ + + +

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n

-

+/

-

+

-

+ +

V + n Additional assimilation tests and other growth characteristics: +

agar, but often only in low abundance. CBS 107.12 and 108.12, which do not form asci in pure culture, are Ludwig's authentic strains, but unfortunately no exact collection data are available. The species is probably restricted to the slime flux of oak. D. magnusii is remarkable for its anisogamous ascus production. Anascogenous cultures morphologically resemble Geotrichum fragrans, but do not produce the strong odor characteristic of the latter species. The mol% G + C of 43.7 in CBS 234.85 was obtained after calculation of the derivative peak. With total DNA, 40.9 mol% was found (de Hoog et al. 1986). The marked spread of G + C values in D. magnusii, as well as in several other Dipodascus species is at least partly caused by considerable amounts of mtDNA or rDNA with a lower mol%G + C.

2-Keto-D-gluconate Growth at 37°C Arbutin Co-Q: 9 (Yamada et al. 1973b). Mol% G + C: 34, CBS 107.12 {T^\ Gueho 1979), 37.8 (BD: Gueho et al. 1985); 40.9, CBS 234.85 (7^: de Hoog et al. 1986).

Origin of the strains studied: CBS 108.12, Lindner; CBS 151.30, type strain of Oospora magnusii, from exudate of oak (Quercus sp.), Stautz; CBS 234.85, from exudate of oak, Wright, Pennsylvania. Possible type strain: CBS 108.12. Comments: Asci are produced on enriched V8 juice

Fig. 72. D. magnusii. Branching pattern of expanding hyphae, arthroconidia with annellated zones, CBS 107.12, MEYA; anisogamous asci liberating ascospores, CBS 234.85, enriched V8, 22T.

29.11. Dipodascus ovetensis (Pelaez & C. Ramirez) von Arx (1977a) Anamorph: Geotrichum sericeum (Stautz) de Hoog, M.Th. Smith & Gueho Synonyms: Endomyces ovetensis Pelaez & C. Ramirez (1956b) Endomycopsis ovetensis (Pelaez & C. Ramirez) Kreger-van Rij (1964a) Zendera ovetensis (Pelaez & C. Ramirez) Redhead & Malloch (1977) Oospora sericea Stautz (1931) Trichosporon sericeum (Stautz) Diddens & Lodder (1942)

29. Dipodascus de Lagerheim / G.S. de Hoog, M.Th. Smith and E. Gueho

191

Ascotrichosporon sericeum (Stautz) Kockova-Kratochvilova, Slavikova, Zemek & Kuniak (1977b) Geotrichum sericeum (Stautz) de Hoog, M.Th. Smith & Gueho (1986)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22*^0, colonies are 15-25 mm in diameter, whitish, moist, buttery. Expanding hyphae are 4.5-6.0 \km wide, arising from a short series of inflated cells, little branched with narrower lateral branches 3.55.0 |im wide, and disarticulating into cylindrical arthroconidia about 10-30 [xm length. Formation of ascospores: Gametangia are mostly located on different hyphae. Asci are broadly ellipsoidal, contain 2-4 ascospores and rupture irregularly at maturity. Ascospores are hyaline or subhyaline, ellipsoidal, (3.04.5)X(5.5-7.0) |im, and with a slime sheath 1-3 fxm thick (Fig. 73). The species is homothallic. Ascospores are observed on vitamin-enriched V8 medium. Fermentation: Glucose Galactose Sucrose

w/-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v v — -

Maltose Lactose Raffinose

-

A/^-Acetyl-D-glucosamine n Methanol n Ethanol + Glycerol + Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate v DL-Lactate + Succinate + Citrate Inositol — Hexadecane n Nitrate Vitamin-free v

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37°C Arbutin Co-Q: 9 (Yamada et al. 1973b). Mol% G + C: 51.2-51.5, CBS 192.55, CBS 634.85 {T^\ de Hoog et al. 1986).

Origin of the strains studied: CBS 192.55 (CBS 2508), from tannin concentrate, Ramirez; CBS 634.85 (CBS 2544), authentic strain of Oospora sericea, from slime flux of oak {Quercus sp.), Stautz, Germany; from slime flux of oak (3); from unknown source (1). Type strain: CBS 192.55. Comments: The species seems to be restricted to the slimefluxesof deciduous trees, Quercus in particular. The strain from tannin concentrate initially may have had a similar ecological niche.

Fig. 73. D. ouetensis. Gametangia, mature asci and liberated ascospores, CBS 635.85, enriched V8; hyphae disarticulate into arthroconidia and conidia with annellated zones, CBS 192.55, MEYA, 22T.

The species is close to D. ingens, but has true hyphae. In addition, larger conidia often show percurrent proliferation (de Hoog et al. 1986). The two species are physiologically identical but have remarkably different G + C percentages of their DNAs. 29.12. Dipodascus spicifer de Hoog, M.Th. Smith & Gueho (1986) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 20 mm in diameter, whitish, with a regular, straight margin; the texture is soft and butyrous. Expanding hyphae are loose and branched at acute angles; hyphae are 2.5-5.0 |im wide, with little differentiation of main and lateral branches; locally they terminate in cylindrical conidiogenous cells with long, cicatrized sympodial rachides. Sympodial conidia are clavate, about 3x7 |im. Hyphae show early disarticulation into rectangular arthroconidia. Formation of ascospores: Gametangia are formed at opposite sides of hyphal septa. Asci are subglobose to broadly cylindrical, (10-12)x(l 1-20) |im, and mostly contain 4 ascospores. Ascospores are subhyaline, ellipsoidal to subcylindrical, 4.5 x (6-7) ^m, and with a slime sheath 1.2-1.6 |im thick (Fig. 74). The species is homothallic. Fermentation: absent.

Vb. Descriptions of teleomorphic ascomycetous genera and species

192

Ascospores are rather abundant in the homothallic strain CBS 244.85, but scarce in the heterothallic species, D. capitatus. The recent finding of strains from human blood, physiologically identical to D. spicifer but without ascospores, complicates the distinction of taxa within the D. capitatus group. Gueho et al. (1987a) noted that the distinction of three taxa was justified on, the basis of DNA/DNA reassociation experiments. The blood cultures may belong to either D. capitatus or Geotrichum clavatum. The latter species grows with salicin, arbutin and cellobiose, but the diagnosis should be expanded to accommodate strains with sympodial rachides. The strain described by Mahul et al. (1989) from a systemic infection in a patient with leukemia also fits G. clavatum. The type of D. spicifer, an insect-associated strain on Opuntia rots, occupies an ecological niche quite different from that ofD. capitatus. 29.13. Dipodascus tetrasperma (Macy & M.W. Miller) von Arx (1977a) Synonyms: Endomyces tetrasperma Macy & M.W. Miller (1971) Zendera tetrasperma (Macy & M.W. Miller) Redhead & Malloch (1977) Fig. 74. D. spicifer Asci with liberated ascospores, CBS 244.85; hyphae with sympodial rachides, clavate sympodial conidia and cylindrical arthroconidia, CBS 244.85, MEYA, 22T.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37°C Arbutin + Co-Q: Not determined. Mol% G + C: 30.6, CBS 244.85 {T^\ Gueho et al. 1987a).

+

Origin of the strain studied: CBS 244.85 from cactus rot, Arizona, Lachance. Type strain: CBS 244.85. Comments: The species is close to D. capitatus, but differs by its ability to grow with cellobiose, salicin and arbutin. Both species form sympodial rachides.

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 22 mm in diameter, whitish, smooth and with finely feathered margins. Expanding hyphae are stiff, 7-9 |im wide, branched at acute angles, and, as they become older, disarticulate into short cylindrical arthroconidia (7-9) x (12-20) fxm. Formation of ascospores: Gametangia are formed with groups on opposite sides of septa. Asci are subglobose, 8-12 fxm in diameter, and contain 2-A ascospores. Ascospores are hyaline, broadly ellipsoidal, (4-5) x (6-7) |im and with a slime sheath 1.5 (im thick (Fig. 75). The species is homothallic. Fermentation: Glucose Galactose Sucrose

+ -

Maltose Lactose Raffinose

-

+ + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + + -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+ + + + -

29. Dipodascus de Lagerheim / G.S. de Hoog, M.Th. Smith and E. Gueho

193

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 3,TC + Co-Q: Not determined. Mol% G + C: 38.8, CBS 765.70 (BD: Gueho et al. 1985); 38, CBS 765.70 {T^: Gueho 1979).

Origin of the strain studied: CBS 765.70 (ATCC 22540), from wet conveyor at prune dehydration plant, Miller, California. Type strain: CBS 765.70. Comments: The species is close to D. magnusii but distinguished from it by the asci which form laterally alongside main branches, whereas those of D. magnusii are formed terminally on lateral branches. Comments on the genus Kurtzman and Robnett (1995) compared described species of Dipodascus from the extent of nucleotide divergence in the 5' end of large subunit rDNAs. Phylogenetic analysis of these data divided Dipodascus into two subclades, one of which included species of Galactomyces (see Fig. 170, p. 385).

Fig. 75. D. tetrasperma, CBS 765.70, MEYA, 22°C. Expanding hyphae with gametangia, asci liberating ascospores and disarticulated hyphae with remains of asci.

Vb. Descriptions of teleomorphic ascomycetous genera and species

194

30. Endomyces Reess G.S. de Hoog Diagnosis of the genus Colonies on natural substrates are white, floccose, pseudomycelial or with true hyphae. Conidia, if present, are sympodially produced in short chains. Species are homothallic. Asci are subglobose to clavate, thin-walled and open by a rupture at the apex. Ascospores are 2-12 per ascus, hyaline, ellipsoidal or unilaterally flattened and helmet-shaped in outline due to a unilateral slimy brim. Species are parasitic on mushrooms. Type species Endomyces decipiens Reess Species accepted 1. Endomyces cortinarii Redhead & Malloch (1977) 2. Endomyces decipiens Reess (1870) 3. Endomyces polyporicola (T. Schumacher & Ryvarden) de Hoog, M.Th. Smith & Gueho (1986) 4. Endomyces scopularum Heifer (1991) Key to species 1. 2(1). 3(2).

a b a b a b

Asci upright, produced on creeping hyphae; parasitizing Aphyllophorales Asci formed in whorls laterally on hyphae; parasitizing Agaricales -^ 2 Asci containing 2 ascospores -^ 3 Asci mostly containing 4 ascospores; on Armillaria Species parasitizing Cortinarius Species parasitizing Tricholoma

Systematic discussion of the species 30.1. Endomyces cortinarii Redhead & Malloch (1977) Colonies on natural substrates: Colonies are white and floccose. Hyphae are hyaline, about 1 |im wide, profusely branched, and slightly constricted at the septa. Conidia are sympodially produced in short chains, and are hyaline and clavate, (1.0-2.0)x(5-15)|im. Asci have crozier-like appendages at the base, are solitary or in small groups alongside hyphae, thin-walled, subglobose, (5.5-6.5)X(7.5-12.0) |im, and contain two ascospores. Ascospores are ellipsoidal, unilaterally flattened, (3.54.0)X(4.0-5.5) |im, and with a prominent slimy brim at the flattened side (Fig. 76).

E. polyporicola:

195

E. decipiens: E. cortinarii: E. scopularum:

194 194 195

floccose. Hyphae are hyaline, 2-3 |im wide, cylindroidal or with inflated cells and constricted at the septa. Hyphae terminally disarticulate into separate cells. Asci are in small clusters just below septa and are subglobose to

Origin of the strain studied: TRTC 47587, dried specimen on old carpophore of Cortinarius huronensis, Ontario, Canada. Type specimen: TRTC 47587, on an agaric. Comments: The species is only known from a single collection; it has not been cultured. The connection with the sympodial anamorph has not unambiguously been proven. The asci, having crozier-like appendages and containing two ascospores, are characteristic for the species. 30.2. Endomyces decipiens Reess (1870) Colonies on natural substrates: Colonies are white and

Fig. 76. E. cortinarii, TRTC 47587. Asci and ascospores on the natural substrate. Bar= 10 jim.

195

30. Endomyces Reess / G.S. de Hoog

t)

^-

Fig. 77. E. decipiens, neotype TRTC. Asci and ascospores on the natural substrate. Bar= 10 ^m. Fig. 78. E. polyporicola, CBS-H 1225. Asci and ascospores on the natural substrate. Bar=10|im.

clavate, (10-14)x(14-19)|im, thin-walled and contain 4 ascospores. Ascospores are broadly ellipsoidal, unilaterally flattened, (5.0-6.5)x(7.0-8.5) [xm, and with a thin slime sheath which forms a brim at the flattened spore side (Fig. 77). Origin of the specimen studied: Rehm Ascom. 1050 (TRTC), on Armillaria mellea, Krieger, Germany. Neotype specimen: Rehm 1050, on an agaric. Comments: The complicated nomenclatural history of this species was discussed by Redhead and Malloch (1977) who indicated a neotype specimen maintained at the TRTC herbarium in Toronto, Canada. Endomyces decipiens has not been grown in culture. Similar to Dipodascus armillariae W. Gams, with which it has often been confused (Gams 1983), the species can be found as a parasite on carpophores of Armillaria (Agaricales) in autumn. A strain, mentioned by Hausner et al. (1992) as E. decipiens was reidentified by Kurtzman & Robnett (1995) as Dipodascus armillariae. 30.3. Endomyces polyporicola (T. Schumacher & Ryvarden) de Hoog, M.Th. Smith & Gueho (1986) Synonym: Dipodascus polyporicola T. Schumacher & Ryvarden (1981)

Colonies on natural substrates: Colonies are whitish and hamper development of the host carpophore. Asci are single or in clusters, clavate to cylindroidal, (6-8) x (1528) (im, and contain 4-6 ascospores which are liberated by apical deterioration of the ascus. Ascospores are hyaline, ellipsoidal, unilaterally flattened, (3-5) x (4.5-6.0) ^im, and with a thin slime sheath which forms a brim at the flattened spore side (Fig. 78).

Origin of the strain studied: CBS-H 1225, onpolypore (Piptoporus soloniensis), Schumacher, Thailand. Isotype specimen CBS-H 1225, on a polypore. Comments: The species was reported as a parasite on developing carpophores of Piptoporus soloniensis (Aphyllophorales). Due to the abundant overgrowth by the parasite, basidia were totally lacking from the host hymenium and only asci were found (Schumacher and Ryvarden 1981). De Hoog et al. (1986) found conidia produced sympodially in low abundance, which possibly represented the anamorph of E. polyporicola. This sympodial rather than arthric anamorph, and the unilaterally hat-shaped ascospores favor the classification of this species in Endomyces rather than in Dipodascus. The species has as yet not been cultured. 30.4. Endomyces scopularum Heifer (1991) Colonies on natural substrates: Colonies are white and floccose. Hyphae are hyaline, 1-2.5 jim wide, profusely branched, and slightly constricted at the septa. Conidia are sympodially produced in short chains, and are hyaline, clavate and about 1.5x5 |im. Asci have crozierlike appendages at the base, are solitary or in small groups alongside hyphae, thin-walled, subglobose, (5.58)x(7-9) |im, and contain two ascospores. Ascospores are ellipsoidal, unilaterally flattened, (4-5.5)x(6.5-9) |im, and separated by a unilateral brim (Fig. 79). Type specimen: PBR M 13/84, on an agaric. Comments: No material was available for study. Judging from the description given by Heifer (1991), the species is very close to E. cortinarii, also having a fragile, Candida-likQ anamorph with clavate conidia. The ascospores in E. scopularum were described

196

Vb. Descriptions of teleomorphic ascomycetous genera and species

Fig. 79. E. scopularum, anamorph, asci and ascospores on the natural substrate. From Heifer (1991).

as lining each other with their brims, while this is less strictly the case in E. cortinarii. Three strains labeled Endomyces scopularum deposited in the CBS culture collection show an expanding, SporothrixAikQ anamorph with conidial denticles. For one of these, CBS 131.86, partial rDNA sequences were determined by Kurtzman and Robnett (1995) who found it to cluster in the Euascomycetes. Possibly Calcarisporiumlike contaminants were isolated rather than Endomyces strains.

Comments on the genus A further species, Endomyces parasiticus Fayod (1885), has been described as a parasite on carpophores of Tricholomopsis rutilans and has not been reported since. The type specimen in the Herbarium of Geneva contains the original drawing but no specimen. The species formed small synnemata on the gills of the agaric and had monopodial, broadly clavate asci. The ascospore shape was described as ellipsoidal, without brim.

31. Endomycete-like genera of mycoparasitic fungi ID. Malloch and G.S. de Hoog

197

31. Endomycete-like genera of mycoparasitic fungi Helicogonium W.L. White, Myriogonium Cain, Trichomonascus H.S. Jackson, Phialoascus Redhead & Malloch D. Malloch and G.S. de Hoog Contents Helicogonium jacksonii

197

Myriogonium odontiae

198

Trichomonascus mycophagus Phialoascus borealis

199 200

31.1. Helicogonium W.L. White Diagnosis of the genus The genus is mycoparasitic. Colonies on natural substrates are composed of branched hyphae. Antheridia are undifferentiated; the ascogonium is loosely coiled and inflates unilaterally to produce a single ascus. Asci are clavate and contain 8 ascospores which are continuous with the ascogonium and open by distal deterioration. Ascospores are hyaline, thin-walled, fusiform, one- or two-celled, and bud within the ascus. Type species Helicogonium jacksonii W.L. White Species accepted \. Helicogonium jacksonii W.L. White (1942) Systematic discussion of the species 31.1.1. Helicogonium jacksonii W.L. White (1942) Colonies on natural substrates: Colonies have a scanty mycelium composed of branched hyphae (1.82.5)|i-m in diameter. The antheridium is an undifferentiated hyphal cell; the ascogonium is loosely coiled and inflates unilaterally to produce a single ascus. Asci contain 8 ascospores and are sessile, clavate, (7.5-10) x (2845) [xm, slightly constricted at the base but continuous with the ascogonium. The wall is slightly thickened at the non-amyloid apex and opens by apical deterioration. Ascospores are hyaline, thin-walled, fusiform, (2.53.0)X(7.5-1 l)(im, one- or two-celled, and bud within the ascus. Secondary budding cells are elongate, (1.52.0)X(3.0^.5) |im, and finally fill the ascus (Fig. 80). Origin of the specimens studied: TRTC 12919, corticiaceous fungus on Ceraceomyces sublaevis on coniferous wood, Ontario, Canada, Skolko; on the same substrate from Ontario, JacksonAVhite; from Russia, Parmasto. Type specimen: TRTC 12919. Comments: The species is only known from herbarium collections from the Northern Hemisphere. It was invariably found inside the hymenium of Athelia sublaevis, formerly known as Corticium microsporum. The host is not significantly affected by the parasite. Asci are dispersed among normally sporulating basidia. Each ascus

Fig. 80. Helicogonium jacksonii, TRTC 12919, on natural substrate. Asci with fusiform ascospores and budding within the ascus. Bar= 10 |im.

formation is preceded by an anisogamous fusion of hyphal cells, the fusion product immediately growing out with an ascus. Croziers are absent and hence only single asci are formed after each sexual event. Except for the budding cells within the ascus no anamorph is produced.

198

Vb. Descriptions of teleomorphic ascomycetous genera and species

31.2. Myriogonium Cain Diagnosis of the genus The genus is mycoparasitic. Colonies on natural substrates are composed of branched hyphae. Gametangia are undifferentiated; asci are formed after fusion of terminal hyphal cells; subsequent asci are produced in a cymose arrangement. Asci are clavate and contain 8 ascospores. They are separated from the crozier by a septum, which opens by distal deterioration. Ascospores are hyaline, thin-walled, elongate, and one-celled. Type species Myriogonium odontiae Cain Species accepted 1. Myriogonium odontiae Cain (1948) Systematic discussion of the species 31.2.1. Myriogonium odontiae Cain (1948) Colonies on natural substrates: Colonies are immersed in the host hymenium and composed of hyaline, amyloid, branched, strongly contorted hyphae which measure (1.0-2.5) fxm. Terminal cells become somewhat swollen and fuse; one of the cells grows out into a crozier and the penultimate cell develops into an ascus. Subsequent crozier formation leads to cymosely arranged groups of asci. Asci are clavate, (5-7)x(l8-25) |im, and contain 8 ascospores which are separated from the crozier by a septum. The wall is thickened at the non-amyloid apex and opens by a distal deterioration. Ascospores are hyaline, thin-walled, clavate to nearly cylindroidal, (1.21.7) X (4.5-6.0) [im, and are one-celled (Fig. 81). Origin of the specimen studied: TRTC 51336, on the corticiaceous fungus Dacryobolus sudans on rotten conifer wood, Austria, Litschauer. Type specimen: TRTC 51336. Comments: The fungus is only known from a single herbarium specimen. The parasite grows with dispersed hyphae into the hymenium of the host without causing significant damage. M. odontiae invades large areas of the host fungus, occurring between normally sporulating basidia, but remaining absent from the sterile host spines which extend from the hymenium. With Melzer's reagent, the hyphae, but not the asci, show a significant amyloid reaction. In older areas the parasite becomes more abundant and then the basidiomycete tissue may be entirely replaced by the parasite. The parasite's hyphae are strongly contorted and hence septa are observed with difficulty. From initial fusion cells, the fungus spreads out

Fig. 81. Myriogonium odontiae, TRTC 51336, on natural substrate. Asci and ascospores; amyloid, contorted hyphae in host tissue. Bar= 10 jxm.

with a series of asci in a cymose arrangement; each ascus is separated from the crozier by a septum. The presence of croziers suggests a relationship to Discomycetes rather than to Saccharomycetes; the species might be compared to the mycoparasitic species Micropyxis tribidariae (Carter and Malloch 1982). No anamorph is produced.

31. Endomycete-like genera of mycoparasitic fungi / D. Malloch and G.S. de Hoog

199

31.3. Trichomonascus H.S. Jackson Diagnosis of tlie genus The genus is mycoparasitic. Asci are immersed in host tissue and are formed terminally on undifferentiated hyphae. The initial cell cuts off a dome-shaped distal cell which is subsequently connected with the supporting hypha and develops into a sterile seta that reaches the surface of the host hymenium. The penultimate cell develops into an ascus containing one-celled ascospores. Type species Trichomonascus mycophagus H.S. Jackson Species accepted 1. Trichomonascus mycophagus H.S. Jackson (1947) Systematic discussion of the species 31.3.1. Trichomonascus mycophagus H.S. Jackson (1947) Formation of ascospores: Asci are formed terminally on undifferentiated hyphae which are deep in host tissue. They are initially hyaline, thick-walled ellipsoidal cells, 15xlO|im, with a dome-shaped distal cell that is soon cut off. The distal cell is subsequently connected with the hypha immediately below the initial ascus. The connecting element is inflated to 4\im in its distal portion. The ultimate cell grows out with a sterile seta 2 x (60-75) |Jim, terminally becoming corkscrew-shaped and reaching the surface of the host hymenium. The penultimate cell develops into an ascus containing four one-celled ascospores. Ascospores are subhyaline, long-ellipsoidal to fusiform, and measure 3x(7-8)|im (Fig. 82).

fungus remains unknown (Benny and Kimbrough 1980). TRTC 32120 also contains a Calcarisporium anamorph with the same hyphal structure as Trichomonascus, but the connection between the two fungi could not unambiguously be verified.

Origin of the specimens studied: TRTC 21820, on the corticiaceous fungus Radulomyces confluens on balsam fir wood (Abies balsamea), Ontario, Canada, Jackson; TRTC 32120, Ontario, Canada, Cain. Type specimen: TRTC 21820. Comments: The species is only known from dried herbarium collections. The karyological events leading to the formation of asci and the role of the corkscrew-shaped extensions, referred to by Jackson (1947) as 'trichogynes', can therefore only be speculated upon. The distal cell seems to be fertilized by a lateral extension and thus functions as an ascogonium, which develops a single ascus after septation. The taxonomic relationship of this peculiar

Fig. 82. Trichomonascus mycophagus, TRTC 21820, on natural substrate. Young ascogonium fertilized by lateral, tubular antheridium; mature asci with ascospores, crowned with corkscrew-shaped ultimate cell. Bar=10^im.

200

Vb. Descriptions of teleomorphic ascomycetous genera and species

31.4. Phialoascus Redhead & Malloch Diagnosis of the genus The genus is mycoparasitic. Hyphae are hyaline and branched. Ascophores are erect, hyaUne, moderately thick-walled and tapering towards the apex. Asci are single, terminal on ascophores, open by apical deterioration, and eventually proliferate with new asci. Ascospores are hyaline, one-celled, and enclosed in a thin gelatinous sheath. Type species Phialoascus borealis Redhead & Malloch Species accepted 1. Phialoascus borealis Redhead & Malloch (1977) Systematic discussion of the species 31.4.1. Phialoascus borealis Redhead & Malloch (1977) Formation of ascospores: Hyphae are immersed, hyaline, branched, and (1.5-2.0) |im wide. Ascophores are one-celled, scattered, and project from and are perpendicular to the host's hymenium. They are hyaline, moderately thick-walled, taper towards the apex, frequently bear a clamp-like structure at the base, and measure (4577)|im long, (3.0-3.5) |im wide above, (5-7) (im wide at the base. Asci are single, terminal on ascophores, hyaline, thin-walled, ellipsoidal to clavate, (6.0-6.5) x (1418)ji-m, and open by apical deterioration. They contain four ascospores. Often new asci are formed by percurrent proliferation. Ascospores are hyaline, ellipsoidal and unilaterally flattened to bean-shaped, (2-4)x(3.57.5) |im, one-celled, and enclosed in a thin gelatinous sheath (Fig. 83). Origin of the specimen studied: TRTC 47588, on a carpophore of Cortinarius huronensis, Ontario, Canada, Redhead and Malloch. Type specimen: TRTC 47588. Comments: Diploidization of ascophores takes place Fig. 83. Phialoascus borealis, TRTC 47588, on natural substrate. at the base of the ascophores in a fashion similar to Ascophores with terminal, percurrent asci-liberated ascospores. Redrawn fertilization in Helicogonium and Dipodascus. Each sexual from Redhead and Malloch (1977). Bar = 10 [im. event results in a single ascophore. As in Cephaloascus, The spores accumulate at the open ends of the asci each ascophore may produce several asci. The asci of Phialoascus proliferate percurrently and hence resemble as sticky balls, suggesting insect dispersal (Redhead and Malloch 1977). No anamorph is known. those of Ascoidea.

32. Eremothecium Borzi emend. Kurtzman / G.S. de Hoog et al.

201

32. Eremothecium Borzi emend. Kurtzman G.S. de Hoog, C.P. Kurtzman, H.J. Phaff and M.W. Miller Diagnosis of the genus Budding cells are absent or present, and when present, budding is multilateral on a narrow base. Cells are globose, ovoidal, ellipsoidal or cylindroidal. Enteroarthric conidia are infrequently produced by one species. Pseudohyphae and true hyphae are generally present. Colonies are smooth or floccose and white, grayish or yellow in color. Asci, which become deliquescent, form 8-32 ascospores that are fusiform or acicular. Ascospores may have a central septum, and those of some species have a tapered, terminal extension of the cell wall. Sugars are fermented by some species. Nitrate is not assimilated. Coenzyme Q may have 5, 6, 7, 8, or 9 isoprene units in the side chain, some of which are in minor proportions. Diazonium blue B reaction is negative. Type species Eremothecium cymbalariae Borzi Species accepted 1. Eremothecium ashbyi (Guilliermond ex Routien) Batra (1973) 2. Eremothecium coryli (Peglion) Kurtzman (1995) 3. Eremothecium cymbalariae Borzi (1888) 4. Eremothecium gossypii (Ashby & Nowell) Kurtzman (1995) 5. Eremothecium sinecaudum (Holley) Kurtzman (1995) Key to species 1. 2(1). 3(2).

a b a b a b c

Ascospores Ascospores Ascospores Ascospores Ascospores Ascospores Ascospores

are curved and sickle-like in appearance are linear in appearance -^ 2 have a long, whip-like terminal appendage do not have whip-like appendages -^ 3 are narrowly triangular in side view with one needle-like end are needle-shaped; length is greater than 20 fxm are needle-shaped; length is ca. 10 fxm

E. ashbyi:

p. 201

E. coryli:

p. 202

E. cymbalariae: p, 204 E. gossypii: p, 204 E. sinecaudum: p, 205

Systematic discussion of the species 32.1. Eremothecium ashbyi (Guilliermond ex Routien) Batra (1973) Synonyms: Eremothecium ashbyi Guilliermond (1935) nom. inval. Crebrothecium ashbyi Guilliermond ex Routien (1949) ISpermophthora gossypii Ashby & Nowell (1926)

Growth on 4®/© malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 5 mm in diameter, initially tan, but later locally excreting riboflavin into the medium. Colonies are dry, initially smooth, but later develop deep radial furrows and have sharp, lobed margins. Budding cells are absent. Hyphae are dichotomously branched, 2-6 [im wide, sparingly septate, and the cells contain yellow, needle-shaped crystals. Enteroarthric conidia are rarely produced. Growth on the surface of assimilation media: Thin pellicles are formed by some strains. Formation of ascospores: Asci are ellipsoidal to fusiform (10-18)x(50-110)|im, and mostly intercalary and in long chains. Each ascus forms 8-16 ascospores which are liberated at maturity. The ascospores are evenly distributed in the ascus, and are hyaline, narrow, sickleshaped, rounded at the tip, but with a basal spine (Fig. 84).

Fig. 84. E. ashbyi, CBS 269.75. Intercalary, disarticulating asci and sickle-shaped ascospores with cellular basal spines, after 1 week, YM agar, 25T.

Vb. Descriptions of teleomorphic ascomycetous genera and species

202

The spore body measures (2.0-3.5)x(20-30)|im, and the spine is 2-10 |im long. The species appears to be homothallic. Ascosporulation was observed on YM agar after 1 week at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

V v v

Lactose Raffinose Trehalose

v v

Assimilation (in yeast nitrogen base + 0.1% yeast extract): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/1 + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ v w/v -

Growtli in 5% malt extract: After 3 days at 25°C, the cells are ovoid, elongate, globose and generally polymorphic. They occur singly, in pairs, or in small chains. The relative proportions of cells of different shapes vary from strain to strain. The size of the ovoid and globose cells varies between (1.7-13.9)x(4.2-14.0)jJim. A butyrous sediment is present; some granular growth may occur. Growth on 10% malt agar: After one month at 25°C, the streak culture is light cream colored, usually abundantly wrinkled but sometimes coarsely folded, glossy, pasty or membranous, slightly raised, and the border is fringed with mycelium. Dalmau plate culture on corn meal agar: True hyphae with few septa are present. Arthroconidia are not formed. Pseudomycelium is usually abundant (Fig. 85). The blastoconidia are ovoid or cylindrical and form short chains in verticillated positions.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction w Saccharate Growth at 2>TC + 10% NaCl/5% glucose Co-Q: 6, CBS 106.43 and 5 additional strains (Yamada et al. 1987b). Mol% G + C: Not determined.

Origin of the strains studied: CBS 106.43 (ex CBS 204.36 = NRRL Y-1360), from cotton, Sudan, Massey and Guilliermond; from cotton (1); from plant-parasitic insect (1). Authentic strain: CBS 106.43. Comments: The name Eremothecium ashbyi was introduced by Guilliermond (1935) without a Latin diagnosis, but the taxon was validated by Routien (1949) in the description of Crebrothecium. The species has been well illustrated and described by Guilliermond (1936), Mukerji (1968) and Batra (1973). The species causes cotton boll rot in various species of Gossypium and induces cankers on citrus fruits. E. ashbyi and E. gossypii are often used for the industrial production of riboflavin. 32.2. Eremothecium coryli (Peglion) Kurtzman (1995) Synonyms: Nematospora coryli Peglion (1897) INematospora lycopersici Schneider (1917) 7Nematospora phaseoli Wingard (1922) Nematospora nagpuri Dastur (Dastur & Singh 1930)

Fig. 85. E. coryli, CBS 2608. Ascus on V8 agar after 2 days at 20''C. Bar=10|im.

Formation of ascospores: Conjugation preceding ascospore formation is not apparent. Asci are long, curved cylindrical cells with rounded ends, or they are sometimes of irregular shape. Usually eight spores are formed per ascus (Fig. 85). Asci with two to four spores occasionally occur; rarely, 12 or 16 spores are present. Asci release the spores very soon after maturity. The spores are spindleshaped with a long, thin, whip-like appendage at one end. SEM photomicrographs show that the surface of the spore-half carrying the appendage is smooth whereas that of the blunted half is ornamented with concentric ridges. This ornamentation is reversed from that in E. sinecaudum. Examination under the light microscope reveals the presence of vacuoles and a difference of refringence between the two halves of the spores. Staining with the periodic-Schiff technique shows that the wall of the half to which the whip is attached takes a deep pink shade whereas the other half remains almost unstained. When stained with the Ziehl-Neelsen or the SchaefferFulton malachite green technique, the half supporting the whip-like appendage is not acid fast and does not retain the malachite green; the other half is acid fast

32. Eremothecium Borzi emend. Kurtzman / G.S. de Hoog et al.

and retains the malachite green (do Carmo-Sousa 1970a). Electron micrographs of longitudinal sections have shown that the spores lack a septum (Kreger-van Rij 1969a). The spores are usually grouped in two bundles of four within the ascus. The whip-free ends of the spore bundles are directed towards the poles of the ascus. Germination of the spores usually takes place near the equator of the spindle on the side of the whip-supporting half and gives rise either to buds or hyphae (Fig. 86).

W^^A ^* 1

0-P

f-j

Fig. 86. E. coryli, CBS 2608. Vegetative cells and germinating ascospore with a bud, after 3 days on 5% malt extract agar at 25°C. Bar= 10 jim.

Ascosporulation was observed after 2-3 days on V8 agar at 20°C in five out of nine strains. Some strains also sporulated on malt agar and glucose-yeast extractpeptone agar.

Fermentation (30"C): Glucose Galactose Sucrose Maltose

+ + +

Assimilation (30"C, in 0.1% yeast extract): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ +

-

+

-

+

-

V

-

Lactose Raffinose Trehalose Soluble starch

yeast

nitrogen

w/-

base

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

Additional assimilation tests and other characteristics:

203

growth

2-Keto-D-gluconate Urease 5-Keto-D-gluconate Lipase + Gelatin hydrolysis v Cadaverine Casein hydrolysis v L-Lysine Cycloheximide 100|ig/ml + Ethylamine Acid production v 50% Glucose Growth at 40°C + 10% NaCl/5% glucose Growth at 45T Starch synthesis Co-Q: 5, CBS 2608, CBS 79 (Yamada et al. 1981); 6, CBS 2599, 2600, 2601, 2604; IGC 3027 = UCD-FST 66-37; NRRL Y-1808 = UCD-FST 68-11; IFO 0658 (Y. Yamada, personal communication). Mol% G + C: 43.2, 43.4, IGC 3027 and CBS 2608, resp. (BD: H.J. Phaff, unpublished data).

Origin of the strains studied: CBS 2608 = UCDFST 66-36 = IFO 1220, isolated by Peglion in 1897 from diseased hazelnuts in Italy; CBS 2599 from cotton bolls, Belgian Congo; CBS 2600 from cotton bolls, U.S.A.; CBS 2601 from tomatoes, British West Indies; CBS 2604, origin not known; CBS 79, from cotton bolls, India (type strain of Nematospora nagpuri); IGC 3027, from Phaseolus vulgaris, Uganda; NRRL Y-1808, from lima beans, U.S.A.; IFO 0658, from A.J. Kluyver, origin not known. Type strain: CBS 2608 (IFO 1220) from diseased hazelnuts in Italy (Peglion 1897). Comments: Strains of E. coryli grow rather poorly in YNB media but supplementation with 0.1% yeast extract (Difco) resulted in rapid and good growth with assimilable carbon sources and no significant growth in control tubes without a carbon source. Because of the high maximum temperature for growth of this species, the fermentation and assimilation tests were conducted at 30°C, which further improved the final test results. E. sinecaudum responded similarly to the growth-promoting activity of yeast extract in YNB media. The question of synonymy for Nematospora phaseoli and N. lycopersici with E. coryli results from the lack of authentic strains of these two species. Batra (1973) recognized A^. lycopersici as a species based on one strain isolated from tomatoes and two from beans. One of these (CMI No. 77-422 from Phaseolus vulgaris in Uganda) was included in our study. Since its characteristics did not differ from the other strains, we concluded, in agreement with do Carmo-Sousa (1970a), that it is conspecific with E. coryli. Batra reported positive nitrate reduction whereas we were unable to obtain growth of any of the strains when nitrate was used as the sole source of nitrogen in the medium. The alternation between haplophase and diplophase in E. coryli is unresolved. Koopmans (1977) made a careful cytological study of E. coryli during vegetative growth and sporulation, but was unable to determine at which stage a cell is committed to become an ascus. She assumed that in some enlarged cells mitotic nuclei fused to form a diploid nucleus, which underwent meiosis to eight nuclei in a greatly enlarged ascus.

204

Vb. Descriptions of teleomorphic ascomycetous genera and species

one another in rhomboid aggregations. Ascospores are hyaline, narrowly triangular and with needle-shaped ends, (2)x(13-16)|im, with the broadest part just below the apex. The ascospores develop in the ascus in two opposed groups with the needle-shaped tips toward the outside. The species appears homothallic. Ascospores were observed on YM agar after 3 days at 20-25°C. Fermentation: absent. Assimilation (in yeast nitrogen base + 0.1% yeast extract):

Fig. 87. E. cymbalariae, CBS 270.75. Terminal asci with inconspicuous basal septa; asymmetrically acicular ascospores. After 3 days on YM agar at 25°C.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

w/-

+ +/w

w/-

+ V

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

v + v -

Additional assimilation tests and other growth characteristics:

E. coryli is parasitic on plants, causing a disease known 2-Keto-D-gluconate Starch formation as stigmatomycosis. The yeast has been found in many 5-Keto-D-gluconate Gelatin liquefaction species of plants throughout subtropical and tropical areas Saccharate Growth at 2)TC v of the world and is always associated with insect punctures 10% NaCl/5% glucose of the plant tissue made by insects with piercing-sucking Co-Q: 7, CBS 270.75 (Yamada et al. 1987b). mouth parts. Frazer (1944) has made a detailed study Mol% G + C: Not determined. of the infection of cotton bolls by the cotton stainer, Origin of the strain studied: CBS 270.75,froma plantDysdercus. The spores of £". coryli appear to be harbored pathogenic insect, Iran, Ershad. in the stylet pouches of Dysdercus suturellus. Type strain: CBS 270.75, designated here as the neotype. 32.3. Eremothecium cymbalariae Borzi (1888) Comments: No type specimen of E. cymbalariae is Growth on 4% malt extract/0.5% yeast extract agar: known to be preserved, consequently, CBS 270.75 is After 10 days at 20-22''C, colonies are 20 mm in diameter, designated as the neotype. The species was reported as a initially tan, but later may exude a yellow pigment into the pathogen of flax and other plants and was redescribed by medium. Colonies are dry and smooth, becoming floccose Arnaud (1913) and Ashby and Nowell (1926). The near at the center, and develop a sharp, lobed margin. Budding absence of septa in this fragile, purely hyphal ftingus is cells are absent. Hyphae are 2^jim wide, fragile, and remarkable. The physiological pattern of the strain was have few septa. tested in yeast nitrogen base supplemented with 0.1% Growth on the surface of assimilation media: yeast extract to enhance growth reactions. Pellicles are not formed. Formation of ascospores: Asci are formed on hyphal 32.4. Eremothecium gossypii (Ashby & Nowell) Kurtzman (1995) tips, often without distinct basal septa, and are narrowly limoniform with a terminal elongation. They measure Synonyms: Nematospora gossypii Ashby & Nowell (1926) (12-14) X (30-65) jim, inclusive of the acuminate tip. Ashbya gossypii (Ashby & Nowell) Guilliermond (1928) Usually 8-16 ascospores are formed in each ascus and Ashbia gossypii (Ashby & Nowell) Ciferri & Fragoso (Fragoso and Ciferri 1928) liberated at maturity (Fig. 87). They often adhere to

32. Eremothecium Borzi emend. Kurtzman / G.S. de Hoog et al.

205

are hyaline, and needle- or spindle-shaped; they usually become two-celled following formation of a median septum. The ascospores, which measure (2.0-3.5)x(2535) |im, have a terminal, filiform appendage that may be as long as 100 |im. Appendages are slimy, causing the ascospores to unite in small groups. The species appears to be homothallic. Ascospores were observed on YM agar after 1 week at 25°C. Fermentation: absent. Assimilation (in yeast nitrogen base + 0.1% yeast extract): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ +/w w/+

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V

+

V

V V

-

+/w w

-

Additional assimilation tests and other g[rowf characteristics:

Fig. 88. E. gossypii, CBS 117.28. Intercalary asci in various stages of maturation, and ascospores showing swelling of the germinating cell. After 1 week on YM agar, 25°C.

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 20 mm in diameter, initially tan, but later exuding a yellow pigment into the medium. Colonies are smooth or finely floccose, moist, wrinkled at the center, and with a sharp, lobed margin. Hyphae (2-6 |im wide) branch dichotomously, and some cells contain yellow, needle-shaped crystals of riboflavin. Conidia, when present, are formed laterally on hyphae, either singly or in short chains, and are ellipsoidal, (2.53.0)x (4.5-7.0) [xm. Growth on the surface of assimilation media: Thin pellicles are formed by some strains. Formation of ascospores: The asci, which are clavate to fusiform, (10-20) x (60-200) |im, are mostly intercalary and in long chains. They disarticulate at maturity and then release the ascospores. Asci contain 12-32 ascospores which are arranged in parallel packets (Fig. 88), and

2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: 6, CBS 109.26, CBS 109.51 Mol% G + C: Not determined.

Starch formation Gelatin liquefaction Growth at 37°C

-

V

+/w

(Yamada et al. 1987b).

Origin of the strains studied: CBS 109.26, from fruit of Asclepias sp., Ashby, Trinidad; from cotton, South Africa (2), Trinidad (2); from unknown sources (5). Authentic strain: CBS 109.26 Comments: Type material is not known to exist for E. gossypii, consequently, CBS 109.26 has been designated as an authentic strain. Pridham and Raper (1950) and Batra (1973) have provided extensive documentation of the distribution o^E. gossypii and most other members of Eremothecium. 32.5. Eremothecium sinecaudum (HoUey) Kurtzman (1995) Synonyms: Nematospora sinecauda Holley (Holley et al. 1984) Holleya sinecauda (Holley) Yamada (1986b)

Growth on YM agar: After 3 days at 30°C, the cells are globose, ellipsoidal and cylindrical, and occur singly, in pairs, or in short chains. Pseudomycelium develops in older cultures. After 2 weeks the streak culture is

206

Vb. Descriptions of teleomorphic ascomycetous genera and species

cream-colored, flat, semi-glossy with a lightly corrugated surface, a pasty texture, and a periphery that is entire or slightly wavy. Growth in YM broth: After 10 days at 30°C, there is abundant sediment; a ring or pellicle is lacking. Cells are mainly cylindrical, but some are ovoidal to long ovoidal or globose or clavate, occasionally with a terminal swelling. Budding is polar (2-7) x (7-25) (im, with cells occasionally up to 30-50 |im long. Growth shows simple to extensively branched pseudomycelium. Dalmau plate culture on corn meal agar: After 9 days at 30°C, there is very dense and extensive pseudomycelium with elongate to short cylindrical blastoconidia formed aerobically as well as under the coverslip (Fig. 89). Formation of ascospores: Asci arise directly from enlarged irregularly shaped vegetative cells which contain two bundles or fascicles of four ascospores each. The spores are acicular or needle-shaped and lie with their blunt ends at the ascus poles, each fascicle at opposite sides of the ascus (Fig. 90). The asci are approximately 8x20|im and the ascospores 1.3-2.5 x 10 |im. Spores are released from the asci upon maturity. Individual spores have a smooth surface at the blunt end, a swollen equatorial plate collar and concentric ridges on the surface of the pointed half which terminates without an appendage (see Holley et al. 1984, Figs. 89, 90). Spores germinate by swelling of the half with the blunt end. Sporulation occurs readily on YM or malt agar at 30°C after 3 days. Fermentation: Glucose Galactose Sucrose Maltose

w/w/w/-

Lactose Raffinose Trehalose

+ + + V + V -

^ ^:>^

%

Fig. 90. E. sinecaudum, CBS 8199. Ascus with 2 bundles of 4 ascospores each. After 3 days on 5% malt extract agar at 30°C. Bar= 15 ^im.

Additional assimilation tests and other growth characteristics: w/-

Assimilation (in yeast nitrogen base + 0.1% yeast extract): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Fig. 89. E. sinecaudum, CBS 8199. Pseudomycelium on corn meal agar after 8 days at 30°C. Bar=20|im.

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol + Erythritol Ribitol Galactitol D-Mannitol D-Glucitol 1 a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free -

2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Cycloheximide 100 mg/ml + Saccharate Growth at 37''C + 10% NaCl/5% glucose Growth at 40''C + Starch formation Growth at 45°C Co-Q: 9 (minor, Q 8) (Yamada 1986b). Mol% G + C: 41.8, UCD-FST 80-21 (BD: Phafif, unpubHshed data).

Origin of the strains studied: CBS 8199, 7233, and 7234 isolated by R.A. Holley from oriental (Brassica juncea) and yellow (B. hirta) mustard seed; UCD-FST 8021 from mustard seed obtained from a commercial spice company, U.S.A. Type strain: CBS 8199, isolated by Holley and Timbers (1983) from highly contaminated oriental mustard seed, Brassica juncea, in commercial storage. Comments: Infection of mustard seed by a Nematosporalike yeast appears to be widespread (Hemmingway 1980). Holley and Timbers (1983) developed a microwave treatment to destroy contaminating yeasts inside the seed without affecting the flavor principle of mustard. Holley et al. (1984) isolated several strains of the contaminating yeast and described it as a new species of Nematospora,

32. Eremothecium Borzi emend. Kurtzman / G.S. de Hoog et al.

N. sinecauda, based on the size and shape of the asci and spores and the absence of a whip-like appendage on the latter. Excellent electron micrographs of asci and spores accompanied the description. Yamada (1986b) restudied the strains that Holley had designated as A^. sinecauda. On the basis of the presence of coenzyme Q-9 as the main ubiquinone in this species, in contrast to that of coenzyme Q-6 in most strains of Nematospora coryli, and the different size and morphology of their asci and ascospores, Yamada transferred A^. sinecauda to a new genus, Holley a, as H. sinecauda. The transfer of H. sinecauda to Eremothecium is discussed under Comments on the genus. Although Holley et al. (1984) reported the assimilation of carbon compounds in Difco yeast nitrogen base (YNB), we obtained very poor growth with this medium, especially on agar media in the presence of other yeasts. This is presumably due to the rapid drop in pH of this medium during growth and the reported sensitivity of H. sinecauda to pH values below 5.0. We supplemented liquid YNB with 0.1% yeast autolyzate and obtained excellent and rapid growth at 30*^0 with assimilable compounds, whereas controls without a carbon source gave a maximum response no greater than a weak reaction. Our results differ somewhat from those of Holley et al. (1984). Additionally, fermentation reactions differ among laboratories and this may reflect the nutrient composition of test media (Barnett et al. 1990, C.P. Kurtzman, unpublished data). Comments on the genus In the present treatment of Eremothecium, the genera Ashbya, Holleya and Nematospora have been placed into synonymy. The four genera are characterized by needleshaped ascospores that may be linear or falcate. Ascospores of Nematospora differ further and are appended with a long flagellum-like terminal extension of cell wall material. The taxa are pathogenic to a variety of plant species (Batra 1973), Sind Ashbya and Eremothecium are used worldwide for production of riboflavin (vitamin B2) (Kaplan and Demain 1970, Wickerham et al. 1946a). Batra (1973) and von Arx et al. (1977) discussed the phenotypic similarities of Ashbya, Eremothecium and Nematospora and suggested that the three taxa might be congeneric. Another genus in this complex is Spermophthora Ashby & Nowell. There is no extant type material from Spermophthora, and strains of the taxon have not been isolated since its original description. Von Arx et al. (1977) suggested that Spermophthora gossypii Ashby & Nowell, the only known species of Spermophthora, represented a contaminated specimen of Eremothecium (Crebrothecium Routien) ashbyi. Additionally, classification of the foregoing taxa has been complicated by the perception (Lodder 1970) that genera which commonly form budding yeast cells (Holleya,

207

Nematospora) are phylogenetically separate from genera that do not ordinarily form budding cells (Ashbya, Eremothecium). Holleya sinecauda was first described as Nematospora sinecauda (Holley et al. 1984). Yamada (1986b) transferred A^. sinecauda to the new genus Holleya because, unlike Nematospora coryli, which has ascospores with long terminal appendages and coenzyme Q with either five or six isoprene units, A^. sinecauda forms shorter ascospores without terminal appendages and produces coenzyme Q with a mixture of eight (minor component) and nine (major component) isoprene units. Yamada and Nagahama (1991) compared partial rRNA sequences from H sinecauda and A^. coryli, and suggested that the extent of divergence was great enough to justify maintaining Holleya and Nematospora as separate genera. Phylogenetic analysis of rRNA/rDNA nucleotide sequence divergence in selected genera of ascomycetous yeasts and yeastlike fungi has indicated that the budding yeasts and yeastlike fiingi represent a group of taxa that is separate from the filamentous ascomycetes (Bams et al. 1991, Berbee and Taylor 1993, Hendriks et al. 1992, Kurtzman 1993a,c, Walker 1985a). In an extension of these studies, Kurtzman and Robnett (1994a) compared partial sequences of large and small subunit rRNAs from the type species of all cultivatable genera of ascomycetous yeasts and yeastlike fungi. Results from this study demonstrated that all budding yeasts and yeastlike fungi are members of a clade separate from the filamentous ascomycetes. The analysis further demonstrated that Ashbya, Eremothecium, Holleya and Nematospora represent closely related members of a subclade that is phylogenetically separate from the subclade that includes the genus Metschnikowia, which is also characterized by needle-shaped ascospores. Taken in the context of this larger data set, Kurtzman (1995) proposed the transfer of species of Ashbya, Holleya and Nematospora to Eremothecium, the genus of taxonomic priority, pointing out that the five species to be included in Eremothecium are members of a monophyletic lineage and that the species show relatively little interspecific divergence. At odds with this interpretation is the disparity in coenzyme Q values found among the species. Some genera show no differences in coenzyme Q contents, whereas other genera, and even some species, produce two forms, but none has the wide range seen among species of the Ashbya/Eremothecium/Holleya/Nematospora clade. However, because rRNA/rDNA comparisons have been reliable predictors of kinship among other groups of yeasts (Kurtzman 1992a, 1994), the sequence analysis was given precedence in defining the taxonomy of this group. Additionally, Messner et al. (1995) compared other rRNA gene sequences from A^. coryli, A. gossypii and E. ashbyi and concluded that the three taxa are congeneric. Species of Eremothecium, as noted earlier, grow poorly in yeast nitrogen base unless it is supplemented with

208

Vb. Descriptions of teleomorphic ascomycetous genera and species

0.1% yeast extract. Even with this adjustment, some variability in assimilation reactions was found among the laboratories of the authors of this chapter. Furthermore, fermentation reactions have been variable between labo-

ratories as well as between repeats in the same laboratory, Consequently, it seems more reliable to key species of Eremothecium on the basis of their morphological characters.

33. Galactomyces Redhead & Malloch / G.S. de Hoog et al.

209

33. Galactomyces Redhead & Malloch G.S. de Hoog, M.Th. Smith and E. Gueho Diagnosis of the genus Colonies are white, farinose or hairy, and dry; hyphae are hyahne and disarticulate into rectangular arthroconidia. Septa have micropores. Gametangia are formed laterally on profusely septate parts of hyphae on opposite sides of septa. Asci are subspherical, containing 1 ascospore which is liberated by disintegration of the entire ascus wall. Ascospores are round, pale brownish, with a rough outer wall layer and with an exosporium and an equatorial furrow. Fermentation is weak or absent. Nitrate is not assimilated. Extracellular starch is not produced. Diazonium blue B reaction is negative. Anamorph genus is Geotrichum. Type species Galactomyces geotrichum (E.E. Butler & L.J. Petersen) Redhead & Malloch Species accepted 1. Galactomyces citri-aurantii E.E. Butler (1988) 2. Galactomyces geotrichum (E.E. Butler & L.J. Petersen) Redhead & Malloch (1977) 3. Galactomyces reessii (van der Walt) Redhead & Malloch (1977) Key to species See Table 24. Morphological l^ey: 1. 2(1).

a b a b

Ascospores echinulate, longest dimensions 7-10 |im Ascospores finely verrucose, longest dimensions 6-9 ^im -^ 2 Ascospores (5-6)x(6-7)[im; species homothallic Ascospores (5-7) x (7-9) |im; species heterothallic

G. geotrichum:

p. 210

G. reessii: p. 212 G. citri-aurantii: p. 209

Physiological key: 1. 2(1).

a b a b

Growth without vitamins Absence of growth without vitamins -^ 2 Growth with ribitol or mannitol Absence of growth with ribitol or mannitol

G. geotrichum:

p. 210

G. citri-aurantii: p. 209 G. reessii: p. 212

Table 24 Key characters of species in the genus Galactomyces Species

Fermentation of glucose

Assimilation Ribitol

Mannitol

Glucono-6-lactone

Growth in Mating system vitamin-free medium

Galactomyces citri-aurantii

Heterothallic

G. geotrichum

Heterothallic

G. reessii

w/-

Homothallic

Systematic discussion of the species

agar: After 10 days at 20-22"C, colonies are 70-80 mm in diameter, white, flat, dry, and powdery to finely hairy 33.1. Galactomyces citri-aurantii E.E. Butler (Butler Hyphae are 2.5-10.0 ^m wide, withfi-equentdichotomous et al. 1988) branching at the apex, with early disarticulation into Anamorph: Geotrichum citri-aurantii (Ferraris) E.E. Butler cubic arthroconidia. Arthroconidia are hyaline and slightly Synonyms: Oidium citri-aurantii Ferraris (1899) inflating to (4-6)x(5-17)|im. Oospora citri-aurantii (Ferraris) Saccardo & Sydow (1902) Geotrichum citri-aurantii (Ferraris) E.E. Butler (Butler et al. 1988) Geotrichum candidum Link var. citri-aurantii (Ferraris) R. Ciferri & E Ciferri (Ciferri 1955a)

Growth on 4% malt extract/0.5% yeast extract

Formation of ascospores: Gametangia are formed in dense clusters laterally on fertile hyphae; gametangia are located on opposite sides of septa or on separate hyphae. Asci are subspherical, (7-12) x (6-9) (im, and contain

210

Vb. Descriptions of teleomorphic ascomycetous genera and species

Fig. 91. G. citri-aurantii, CBS 175.89x176.89, PDA, 22X, 2 weeks. Asci with mature ascospores. one ascospore. Ascospores are broadly ellipsoidal, ( 5 7) X (7-9) |im, hyaline, with a smooth or verruculose inner wall and an irregular exosporium, often with a hyaline equatorial furrow and a central lipid droplet (Fig. 91). The species is heterothallic.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

V

-

Additional assimilation characteristics:

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free tests

and

other

n n + +

-

+

-

+ +

-

+ + +

-

n

-

growth

Arbutin Growth at 37T Co-Q: Not determined. Mol% G + C: 37.9-39.2, 5 strains {T^: Smith et al. 1995c). Origin of the strains studied: CBS 175.89, from soil of an orange orchard, Zimbabwe, Butler; CBS 176.89, from soil of an orange orchard, California; from citrus (3); from soil (4). Complementary mating types: Mating type Al\ CBS 228.38, CBS 175.89, CBS 604.85, Butler 564B, Butler 594A; mating type A2\ CBS 176.89, CBS 605.85, Butler 564C, Butler 594B. Type strain: CBS 175.89x 176.89, the tester strains of Galactomyces citri-aurantii.

Comments: The species was segregated from Galactomyces geotrichum/Geotrichum candidum for a taxon causing sour rot on citrus. Smith et al. (1995c) confirmed this conclusion by obtaining low DNA/DNA homology values for the species with both Galactomyces geotrichum and G. reessii. 33.2. Galactomyces geotrichum (E.E. Butler & L.J. Petersen) Redhead & Malloch (1977) Anamorph: Geotrichum candidum Link:Fries Synonyms: Endomyces geotrichum E.E. Butler & L.J. Petersen (1972) Dipodascus geotrichum (E.E. Butler & L.J. Petersen) von Arx (1977a) Geotrichum candidum Link (1809) Geotrichum candidum Link:Fries (1832) Botrytis geotricha Link (1824) Acrosporium candidum (Link) Sprengel (1827) Torula geotricha (Link) Corda (Sturm 1829) Mycoderma malti-juniperi Desmazieres (1827) Oidium lactis Fresenius (1850) Oospora lactis (Fresenius) Saccardo (1886) Oosporoidea lactis (Fresenius) Sumstine (1913) Oidium lactis Fresenius var. luxurians Reiss (1854) Oidium obtusum von Thiimen (1875) Oospora lactis (Fresenius) Saccardo var. obtusa (von Thiimen) Saccardo (1886) Oidium nubilum Weigmann & Wolff (1909) Oospora nubila (Weigmann & Wolff) Berkhout (1923) Oidium humi Maze (1910) Oospora humi (Maze) Berkhout (1923) Monilia asteroides Castellani (1914) Oidium asteroides (Castellani) Castellani & Chalmers (1919) Mycoderma asteroides (Castellani) Brumpt (1922) Geotrichum asteroides (Castellani) Basgal (1931) Oidium matalense Castellani (1915) Mycoderma matalensis (Castellani) Brumpt (1922) Oospora matalensis (Castellani) Berkhout (1923) Pseudomycoderma matalensis (Castellani) Ciferri (1930b) Geotrichum matalense (Castellani) Castellani (1932) Pseudomonilia matalensis (Castellani) C.W. Dodge (1935) Endomyces lactis Windisch var. matalensis (Castellani) Windisch (1951) Trichosporon matalense (Castellani) Ciferri (1955b) Oospora lactis (Fresenius) Saccardo var. parasitica Pritchard & Porte (1923) Oidium suaueolens Krzemecki var. minuta Berkhout (1923)

33. Galactomyces Redhead & Malloch / G.S. de Hoog et al. Oospora fragrans Berkhout var. minuta Berkhout (1923) Oospora lactis (Fresenius) Saccardo var. exuberans Stautz (1931) Geotrichum matalense (Castellani) Castellani var. chapmanii Castellani (1932) Geotrichum jauanense Verona (1933) Geotrichum uersiforme M. Moore (1934) Geotrichum redaellii Negroni & Fischer (1940) Endomyces lactis Windisch (1951) Geotrichum nouakii El-Masry & Zsolt (1968) Geotrichum pseudocandidum Saez (1968b)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 50-80 mm in diameter, white, flat, dry, and powdery to finely hairy Odor is insignificant or fi"uity. Expanding hyphae are parallel, often with dichotomous branching; the main branches are 7-12 |im wide, with firm walls, and lateral branches are 2.5^.0 |im wide, with early disarticulation into cubic arthroconidia. Arthroconidia are hyaline and slightly inflating to (5-6)x(5-17)!im. Formation of ascospores: Gametangia are formed laterally on densely septate parts of fertile hyphae which arise after mating; gametangia are located on opposite sides of the septa. Asci are subspherical, (7-10)x(69) [xm, and contain one ascospore. Ascospores are broadly ellipsoidal, (6-9) x (7-10) |im, pale golden-brown, with an echinulate inner wall and an irregular exosporium, often

Fig. 92. G. geotrichum, CBS 772.71, MEYA, 22°C, 2 weeks. Hyphal tips with di- and trichotomous branching. Mature main branches and disarticulating lateral branches from various cultures; asci with ascospores.

211

with a hyaline equatorial furrow (Fig. 92). The species is heterothallic. Fermentation: V Glucose Maltose Lactose V Galactose Raffinose Sucrose Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

V

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

V

V

+

V V V

-

n

+ Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37''C v Arbutin Co-Q: Not determined. Mol% G + C: 42.9^5.2, 11 strains {T^: de Hoog et al. 1986); 40.742.3, 4 strains (BD: Gueho et al. 1985).

Origin of the strains studied: CBS 110.12, probably authentic for Oidium humi; CBS 122.22, authentic for Oospora fragrans var. minuta, from banana, Berkhout; CBS 114.23, authentic for Oidium nubilum, Berkhout; CBS 116.23, authentic for Oospora lactis YSLY, parasitica, from rotten tomato, Pritchard and Porte, Maryland; CBS 149.26, authentic for Oidium asteroides, Castellani; CBS 178.30, type strain of Oospora lactis var. exuberans, from Populus sap, Stautz; CBS 180.33, authentic for Geotrichum matalense var. chapmanii', CBS 182.33, type strain of Geotrichum jauanense, from yoghurt, Verona; CBS 193.34, type strain of Geotrichum uersiforme, Moore; CBS 195.35, authentic for Geotrichum matalense, Castellani; CBS 178.53, type strain oi Endomyces lactis, Windisch; CBS 772.71 (ATCC 22600), from soil, Puerto Rico, Butler; CBS 557.83, type strain of Geotrichum nouakii, from prune, Egypt, Zsolt; CBS 626.83, type strain of Geotrichum pseudocandidum, from stomach of elk, Paris, Saez; CBS 279.84, type strain of Geotrichum redaellii, Saez; additional strains isolated from milk (1), Hyacinthus bulb (1), tomato (1), human nail (1), hght oil (2), human tongue (1), grain (1), cheese (2), soil (2), paper pulp (1), red beet (1) and insect (1). Complementary mating types: Mating type a\ CBS 357.86, CBS 774.71 (tester strain), CBS 557.83, CBS 606.85. Mating type a: CBS 267.79, CBS 180.33, CBS 775.71 (tester strain), CBS 626.83, CBS 607.85.

212

Vb. Descriptions of teleomorphic ascomycetous genera and species

Type strain: CBS 772.71, type strain of Galactomyces geotrichum and neotype strain of Geotrichum candidum. Comments: Galactomyces geotrichum, better known under the anamorph name Geotrichum candidum, is common in all kinds of moist substrates, particularly in citrus fruits and tomatoes, and mainly as a rotter of ripe fruits. The species may occur in a relatively early stage of fruit development and hence it has been presumed to be a weak pathogen. In other nutrient-rich substrates it unambiguously occurs as a saprophyte, e.g., in liquid pig's fodder and in lipid-containing materials such as milk and cheese. Thirdly, G. geotrichum is occasionally associated with human pulmoneous disease. Probably deep, saprophytic colonization is of concern rather than pathogenicity. The species is reported to be heterothallic. Crossed strains are fertilized and subsequently fertile hyphae develop which locally become profusely septate with cells often wider than long. On both sides of the septa gametangia develop which fuse and give rise to subglobose asci. De Hoog et al. (1986) and Smith et al. (1995c), using DNA/DNA reassociation techniques found several groups within the species separated by low or intermediate relatedness. The two tester strains showed intermediate reassociation with remaining groups, which are therefore interpreted as varieties. Geotrichum candidum is morphologically recognized by its rapid expansion growth, very wide main branches and often dichotomously branched ends of expanding hyphae; in contrast to the anamorphs of Galactomyces reessii and G. citri-aurantii, it is able to grow on media without vitamins. 33.3. Galactomyces reessii (van der Walt) Redhead & Malloch (1977) Synonyms: Endomyces reessii van der Walt (1959c) Dipodascus reessii (van der Walt) von Arx (1977a)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 65 mm in diameter, flat, white, dry and cottony. Expanding hyphae are submerged, and without dichotomous branching. Main branches are 6-9 |im wide, with lateral branches 4 6|im wide, which soon disarticulate into rectangular arthroconidia (3.5^.5)x(6-15) jim. Formation of ascospores: Hyphae with local, profuse septation develop gametangia on opposite sides of septa. Asci are subspherical, (7-10)x(6-8)(im, and contain one ascospore. Ascospores are broadly ellipsoidal, (5-6) x ( 6 7)|im, pale golden-brown, finely warted, with irregular, locally inflated exosporium, and often with a hyaline median furrow (Fig. 93). The species is homothallic. Fermentation: Glucose Galactose Sucrose

v -

Maltose Lactose Raffinose

-

Fig. 93. G. reessii, CBS 179.60, MEYA, 22T, 2 weeks. Branching pattern, disarticulating hyphae and asci with ascospores.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

n n + +

-

+

-

+ + V

-

n

-

growth

2-Keto-D-gluconate Growth at 37T v Arbutin Co-Q: Not determined. Mol% G + C: 34.5, CBS 179.60 {T^: Gueho 1979); 36.9, CBS 179.60 (BD: Gueho et al. 1985).

Origin of the strains studied: CBS 179.60, from waterrotted Hibiscus', from fodder (2). Type strain: CBS 179.60.

33. Galactomyces Redhead & Malloch / G.S. de Hoog et al.

Comments: The species is close to Galactomyces geotrichum but differentiated by having a smaller micromorphology; the hyphae are less than 9[im wide and are without dichotomous branching. G. geotrichum mostly shows weak fermentation of glucose, and usually growth with D-mannitol, D-glucono-6-lactone and on media without vitamins. The two species are clearly different in their nuclear DNA G + C content.

213

Comments on the genus Kurtzman and Robnett (1995) demonstrated from comparisons of nucleotide sequence divergence in the 5' end of large subunit rDNA that Galactomyces appears congeneric with Dipodascus.

214

Vb. Descriptions of teleomorphic ascomycetous genera and species

34. Hanseniaspora

Zikes

M.Th. Smith Diagnosis of the genus Asexual reproduction is by bipolar budding in basipetal succession on a narrow base. Cells are apiculate, ovoidal to long-ovoidal or elongate. Pseudohyphae are absent or present, usually rudimentary and rarely well-developed. Vegetative cells are diploid. Asci arise without conjugation. Ascospores are 1 ^ per ascus, hat- or helmet-shaped, or spheroidal with warts only, or smooth or warty with an equatorial ledge. Asci are persistent or deliquescent. Glucose is fermented. Nitrate is not assimilated. Inositol and pantothenate are required for growth. Acetic acid is not produced. Diazonium blue B reaction is negative. Type species Hanseniaspora valbyensis Klocker Species accepted 1. Hanseniaspora guilliermondii Pijper (1928) 2. Hanseniaspora occidentalis M.Th. Smith (1974) 3. Hanseniaspora osmophila (Niehaus) Phaff, M.W. Miller & Shifrine ex M.Th. Smith (1984) 4. Hanseniaspora uuarum (Niehaus) Shehata, Mrak & Phaff ex M.Th. Smith (1984) 5. Hanseniaspora valbyensis Klocker (1912) 6. Hanseniaspora vineae van der Walt & Tscheuschner (1957) Key to species See Table 25. A key to all described species based entirely on physiological reactions is given under the genus Kloeckera. 1. 2(1). 3(1). 4(3). 5(3).

a b a b a b a b a b

Ascospores hat-shaped -^ 2 Ascospores spheroidal -^ 3 Growth at 37°C Absence of growth at 2)TC Maltose assimilated -^ 4 Maltose not assimilated -^ 5 Growth at 34''C Absence of growth at 3 4 ^ Sucrose assimilated Sucrose not assimilated

H. guilliermondii: p. 215 H. valbyensis: p. 218 H. vineae: H. osmophila: H. occidentalis: H. uvarum:

p. p. p. p.

Table 25 Key characters of species in the genus Hanseniaspora Species

Assimilation Sucrose

Growth

Maltose

at 34"C

H. uvarum

-

H occidentalis

+

H. osmophila

V

+

-

H vineae

V

+

+

Hanseniaspora valbyensis H guilliermondii

-

Ascospores at 3>TC

Shape

Number^

-

-

hat

1-^(2)

+

+

hat

1-4(4)

n

-

spherical, warty + equatorial ledge

1-2

n

-

spherical, smooth + equatorial ledge

1-2

-

spherical, warty

1-2

spherical, warty

1-2

^ The numbers in parentheses refer to the number of spores per ascus most frequently observed.

219 216 215 217

34. Hanseniaspora Zikes /M.Th. Smith

215

Systematic discussion of the species 34.1. Hanseniaspora guilliermondii Pijper (1928) Anamorph: Kloeckera apis Lavie ex M.Th. Smith, Simione & S.A. Meyer Synonyms: Hanseniaspora melligeri Lodder (1932) Hanseniaspora apuliensis Castelli (1948) Kloeckera apiculata (Reess) Janke var. apis Lavie (1954) Kloeckera apis Lavie ex M.Th. Smith, Simione & S.A. Meyer (1977)

Growth in glucose-yeast extract-peptone water: After 2 days at 25°C, the cells are apiculate, ovoidal or elongate, (2.2-5.8) x(4.5-10.2) |im, or occasionally longer, and single or in pairs. Reproduction is by bipolar budding. A sediment is present. After one month a thin ring is formed. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is white to cream-colored, smooth, glossy, and slightly raised at the center. Dalmau plate cultures on potato agar: Pseudomycelium is rudimentary or absent. Formation of ascospores: One to four, mostly four, hatto helmet-shaped ascospores, which are normally released at maturity from the ascus (Fig. 94), often aggregate after liberation. Abundant sporulation is usually observed on 5% Difco malt extract agar and on potato dextrose agar at low temperature (15°C) after 7 or more days. Fermentation:

Glucose Galactose Sucrose Maltose

+

Lactose Raffinose Trehalose

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n -

-

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+

-

+ v n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 0.01% Cycloheximide + Growth at 37"C + Co-Q: 6 (Yamada et al. 1976a, Billon-Grand 1987). Mol% G + C: 32.9-34.2, 11 strains, including CBS 95, CBS 465, CBS

Fig. 94. H. guilliermondii. Asci with ascospores on 5% malt extract agar after 7 days at 25T. Bar= 10 [im (from H.J. Phaff 1970a). 466, CBS 1972, CBS 2574, CBS 2591, CBS 5060 {T^\ Meyer et al. 1978).

Origin of the strains studied: CBS 465, diseased nail, Pijper; CBS 95, fermenting bottled tomatoes, van Rhee; CBS 466, dates, Chodat, type strain of//, melligeri; CBS 1972, grape juice, Castelli, authentic strain of / / apuliensis; CBS 2567, grape must, Capriotti; CBS 2574, grape juice, Capriotti; CBS 2591, bee trachea, Chauvin, type strain of Kloeckera apis; CBS 4378, caecum of baboon, do Carmo-Sousa; CBS 5060, culture contaminant, Phaff; CBS 6619, CBS 6707, unknown, Nakase. Type strain: CBS 465 (ATCC 10630, NRRL Y-1625), isolated by Pijper. Comments: The species H. apuliensis, H. guilliermondii and H. melligeri, which were placed in synonymy with and maintained as synonyms of H. valbyensis by Lodder and Kreger-van Rij (1952) and Phaff (1970a), respectively, were separated from H. valbyensis by Meyer et al. (1978) on the basis of low DNA homology. A high degree of reassociation was revealed between //. apuliensis, H. guilliermondii, H. melligeri and Kloeckera apis. 34.2. Hanseniaspora occidentalis M.Th. Smith (1974) Anamorph: Kloeckera javanica (Klocker) Janke Synonyms: Pseudosaccharomyces antillarum Klocker (1912b) Kloeckera antillarum (Klocker) Janke (1928) Hanseniaspora antillarum Kudryavtsev (1960) Pseudosaccharomyces indicus Klocker (1912b) Kloeckera indica (Klocker) Janke (1928) Pseudosaccharomyces jauanicus Klocker (1912b) Kloeckera javanica (Klocker) Janke (1928) Pseudosaccharomyces jensenii Klocker (1912b) Kloeckera jensenii (Klocker) Janke (1928) Pseudosaccharomyces lafarii Klocker (1912b) Kloeckera lafarii (Klocker) Janke (1928) Kloeckera javanica (Klocker) Janke var. lafarii (Klocker) M.W. Miller & Phaff (1958) Pseudosaccharomyces malaiana Klocker (1912b) Kloeckera malaiana (Klocker) Janke (1928) Pseudosaccharomyces occidentalis Klocker (1912b) Kloeckera occidentalis (Klocker) Janke (1928)

Vb. Descriptions of teleomorphic ascomycetous genera and species

216

Kloeckeraspora occidentalis (M.Th. Smith) Maeda, Y. Yamada & Banno (Yamada et al. 1992e) Pseudosaccharomyces willi Klocker (1912b) Kloeckera willi (Klocker) Janke (1928) IKloeckera cacaoicola Ciferri (1931b)

Growth in glucose-yeast extract-peptone water: After 2 days at 25°C, the cells are lemon-shaped, ovoidal or sometimes spheroidal, (1.8-6.2)x(3.0-11.0)|im, and single or in pairs. Sediment is formed. After one month a very thin ring is present. Growth on glucose-yeast extract-peptone agar: After one month at 25*^0, the streak culture is white to cream-colored, smooth, glossy, and with a raised center and a flat periphery. Dalmau plate culture on potato agar: Pseudomycelium is generally lacking, but some strains produce a rudimentary or well-developed pseudomycelium. Formation of ascospores: One or two ascospores are formed per ascus and are spheroidal and smooth with an equatorial ledge. Ascospores are not released from the ascus. Sporulation occurs on 5% Difco malt extract agar at 25°C after 7 or more days. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

-

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+

-

+

-

+

-

+ n Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 34°C n Starch formation Growth at 37°C 0.01% Cycloheximide

Co-Q: 6 (Yamada et al. 1976a, Billon-Grand 1987). Mor/o G + C: 34.9-35.9, 10 strains, including CBS 282, CBS 283, CBS 284, CBS 2335, CBS 2578, CBS 2592 {T^: Meyer et al. 1978).

strain of Pseudosaccharomyces Jauanicus; CBS 283, soil, NCTC, type strain of Pseudosaccharomyces jens enii; CBS 284, soil, NCTC, type strain of Pseudosaccharomyces lafarii; CBS 2335, type strain of Kloeckera indica; CBS 2569, Drosophila sp., Shehata; CBS 2578, soil, NCTC, type strain of Pseudosaccharomyces willi; CBS 6623, CBS 6624, unknown, Nakase; CBS 6782, CBS 6783, orange juice, van Grinsven. Type strain: CBS 2592 (ATCC 32053, NPIRL Y-7946) isolated by Klocker and received through Winge. Comments: DNA reassociation studies by Meyer et al. (1978) showed H. occidentalis and Kloeckera javanica to have high base sequence complementarity, thus establishing the teleomorph-anamorph relationship, as suggested by Smith (1974) on the basis of physiological characteristics.

34.3. Hanseniaspora osmophila (Niehaus) Phaff, M.W. Miller & Shifrine ex M.Th. Smith (1984) Anamorph: Kloeckera corticis (Klocker) Janke Synonyms: Pseudosaccharomyces corticis Klocker (1912b) Kloeckera corticis (Klocker) Janke (1928) Pseudosaccharomyces magnus de Rossi (1920) Kloeckera magna (de Rossi) Janke (1928) Pseudosaccharomyces santacruzensis Klocker (1912b) Kloeckera santacruzensis (Klocker) Janke (1928) IKloeckera domingensis Ciferri (1930a) Kloeckeraspora osmophila Niehaus (1932) Hanseniaspora osmophila (Niehaus) Phaff, M.W. Miller & Shifrine (1956) nom. inval.

Growth in glucose-yeast extract-peptone water: After 2 days at 25''C, the cells are lemon-shaped, ovoidal or long-ovoidal, (3.5-6.0)x(7.2-18.2) |im, and single or in pairs. Sediment is present. After one month, a thin ring is formed. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is white to cream-colored, smooth and glossy; the center is raised and the periphery is flat. Dalmau plate cultures on potato agar: Branched pseudomycelium is formed. Formation of ascospores: One to two ascospores are formed per ascus and are spheroidal and warty. They are not released from the ascus. Sporulation occurs on 5% Difco malt extract agar at 25°C after 7 or more days.

Origin of the strains studied: CBS 2592, soil, Fermentation: Kufferath, type strain of Pseudosaccharomyces occiden- Glucose Galactose talis', CBS 280, soil, Winge, type strain of Pseudosac- Sucrose charomyces antillarum; CBS 282, soil, Kufferath, type Maltose

Lactose Raffinose Trehalose

34. Hanseniaspora Zikes / M. Th. Smith

Assimilation : Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

V

+ +

-

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + n -

Additional assimilation tests and other growth characteristics:

217

Growth in glucose-yeast extract-peptone water: After 2 days at 25''C, the cells are apiculate, spheroidal to ovoidal, elongate, (1.5-5.0)x(2.5-11.5) (im, and single or in pairs. Sediment is present. After one month, a very thin ring is formed. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is white to creamy, smooth, glossy, and slightly raised at the center. Dalmau plate cultures on potato agar: A rudimentary branched pseudomycelium may be present or absent. Formation of ascospores: One to two warty, spheroidal ascospores are formed per ascus and have an equatorial or subequatorial ledge (Fig. 95). Both warts and ledge may be inconspicuous under the light microscope. Ascospores are not released from the ascus. Sporulation occurs on 5% Difco malt extract agar after 4 days or more at 25°C.

2-Keto-D-gluconate 0.01% Cycloheximide Starch formation Growth at 3 4 T Co-Q: 6 (Yamada et al. 1976a, Billon-Grand 1987). Mol% G + C: 39.8-40.5, 7 strains, including CBS 105, CBS 106, CBS 313, CBS 1999 {T^: Meyer et al. 1978).

Origin of the strains studied: CBS 313, Riesling grapes, Niehaus; CBS 105 (ATCC 10640, NRRL Y-1611), grapes, Castelli, type strain of Pseudosaccharomyces magnus; CBS 106 (ATCC 10635, NRRL Y-1381) tree bark, NCTC^ type strain of Pseudosaccharomyces corticis; Fig. 95. H. uvarum. Asci with CBS 1999, soil, CLSMR^, type strain of Pseudosaccha- 7 days at 25''C. Bar = 10 ^im. romyces santacruzensis; CBS 4266, cider. Beech; CBS 6554 (ATCC 20111), unknown, Takeda Chem. Ind. Ltd.; CBS 6622, unknown, IFO; CBS 6704, unknown, Nakase. Fermentation: Type strain: CBS 313, isolated by Niehaus. Glucose + Galactose Sucrose 34.4. Hanseniaspora uvarum (Niehaus) Shehata, Maltose Mrak & Phaff ex M.Th. Smith (1984) Anamorph: Kloeckera apiculata (Reess emend. Klocker) Janke Assimilation:

Synonyms: Saccharomyces apiculatus Reess (1870) Pseudosaccharomyces apiculatus (Reess) Klocker (1912b) Kloeckera apiculata (Reess emend. Klocker) Janke (1928) Hanseniaspora apiculata Kudryavtsev (1960) Pseudosaccharomyces austriacus Klocker (1912b) Kloeckera austriaca (Klocker) Janke (1928) Pseudosaccharomyces germanicus Klocker (1912b) Kloeckera germanica (Klocker) Janke (1928) Pseudosaccharomyces muelleri Klocker (1912b) Kloeckera muelleri (Klocker) Janke (1928) Kloeckeraspora uvarum Niehaus (1932) Hanseniaspora uvarum (Niehaus) Shehata, Mrak & Phaff (1955) nom. inval. Kloeckera brevis Lodder (1934) Kloeckera lindneri (Klocker) Janke var. pelliculosa Lodder (1934) Kloeckera brevis Lodder var. rohrbachense von Szilvinyi & Kaulich (1948) nom. inval. Kloeckera lodderi van Uden & Assis-Lopes (1953a)

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

^ NCTC, National Collection of Type Cultures, U.K. ^ CLSMR, The former Central Laboratory of the South Manchurian Railroad.

+

-

+

-

ascospores on 5% malt extract agar after

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

V

-

+ V

-

n

-

218

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 0.01% Cycloheximide + Starch formation Growth at liTC Co-Q: 6 (Yamada et al. 1976a, Billon-Grand 1987). Mol% G + C: 32.7-35.1, 20 strains, including CBS 104, CBS 279, CBS 286, CBS 287, CBS 314, CBS 2579, CBS 2580, CBS 2585, CBS 2587 {T^\ Meyer etal. 1978).

Origin of the strains studied: CBS 314 (ATCC 32369, NRRL Y-1614), muscat grapes, Niehaus; CBS 104 (ATCC 32856), unknown, Winge, type strain of Pseudosaccharomyces apiculatus; CBS 279, unknown, CLSMR, type strain ofKloeckem breuis; CBS 286 (ATCC 10639), soil, NCTC, type strain of Pseudosaccharomyces malaianus and Kloeckera lindneri var. pelliculosa; CBS 287, soil, Winge, type strain of Pseudosaccharomyces muelleri; CBS 2579, soil, NCTC, type strain of Pseudosaccharomyces austriacus; CBS 2580, soil, Kufferath, type strain of Pseudosaccharomyces germanicus; CBS 2585, baker's yeast, van Uden, type strain of Kloeckera lodderi; CBS 2587, fruit must, von Szilvinyi, authentic strain of Kloeckera breuis var. rohrbachense; and 22 additional strains isolated from grapes (1), soil (1), Drosophila (2), seawater (4), cacao (1), cucumber brine (1), caterpillar (1), cider (1), throat (1), unknown (4), fruit must (2), fresh water (3). Type strain: CBS 314, isolated by Niehaus. 34.5. Hanseniaspora valbyensis Klocker (1912b) Anamorph: Kloeckera japonica Saito & Ohtani Synonyms: Endomyces valbyensis (Klocker) Zender (1925b) Kloeckera japonica Saito & Ohtani (1931) Kloeckera corticis (Klocker) Janke var. pulquensis Ulloa & Herrera (1973)

Growth in glucose-yeast extract-peptone water: After 2 days at 25°C, the cells are apiculate, spheroidal to ovoidal or elongate, (2.0-5.5)x(3.0-10.2) |im, and single or in pairs (Fig. 96). Sediment is present. After one month a thin ring may be formed. Growtli on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is white to

0^ "v^ (^

O'^o

Fig. 97. H. valbyensis, CBS 6618. Asci with ascospores on 5% malt extract agar after 7 days at 25*'C. Bar= 10 ^im.

cream-colored, smooth, glossy, and slightly raised in the center. Dalmau plate cultures on potato agar: A rudimentary branched pseudomycelium may be present or absent. Formation of ascospores: Two to four, but mostly two, hat- to helmet-shaped ascospores are formed per ascus and they are usually released at maturity (Fig. 97). Liberated ascospores often aggregate. Ascospores were observed on 5% Difco malt extract agar and potato agar after 7 or more days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Assimilatioi i: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ -

Lactose Raffinose Trehalose

-

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi-ee

n -

-

+

+ n assimilation tests and other growth Additional

characteristics: 2-Keto-D-gluconate 0.01% Cycloheximide + Starch formation Growth at 34°C Co-Q: 6 (Yamada et al. 1976a, Billon-Grand 1987). Mol% G + C: 28.8-30.0, 10 strains, including CBS 281, CBS 311, CBS 479, CBS 6558 {T^: Meyer et al. 1978). Fig. 96. H. valbyensis. Budding cells in malt extract after 3 days at 25''C. Bar= lOjim (from Lodder and Kreger-van Rij 1952).

Origin of the strains studied: CBS 479, soil, Klocker; CBS 281 (NRRL Y-1382), tree exudate, Inst. Brew. Coll., Hiroshima, type strain of Kloeckera japonica; CBS 311,

34. Hanseniaspora Zikes / M. Th. Smith

219

beer, de Graaf; CBS 480, Winge; CBS 481 (ATCC 2108), unknown. Miller; CBS 2590, draught beer, Johnsonn; CBS 6558 (NRRL Y-7575), pulque, Kurtzman, type strain of Kloeckera corticis var. pulquensis; CBS 6618, tomato, Nakase; NCYC 468, spoiled beer, Hemmons; NCYC 766, unknown, Davenport. Type strain: CBS 479, isolated by Klocker. 34.6. Hanseniaspora vineae van der Walt & Tscheuschner (1957b) Anamorph: Kloeckera africana (Klocker) Janke Synonyms: Pseudosaccharomyces africanus Klocker (1912b) Kloeckera africana (Klocker) Janke (1928) Vanderwaltia vineae (van der Walt & Tscheuschner) Novak & Zsolt (1961) Hanseniaspora nodinigri Lachance (1981) Kloeckeraspora vineae (van der Walt & Tscheuschner) Y. Yamada, Maeda & Banno (1992e)

Growth in glucose-yeast extract-peptone water: After 2 days at 25°C, the cells are apiculate, spheroidal to ovoidal or elongate, (2.0-7.5) x (4.0-14.5) |im, and mostly single or sometimes in pairs. Sediment is formed. After one month a very thin ring may be present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is white to cream-colored, smooth and glossy; the center is raised, and the periphery is flat. Dalmau plate cultures on potato agar: A pseudomycelium is formed, that may be rudimentary or welldeveloped with or without clusters of blastospores. Formation of ascospores: One to two spheroidal, warty ascospores are produced per ascus (Fig. 98). Ascospores are not released from the ascus. Sporulation was observed on 5% Difco malt extract agar and YM agar after 7 days or more at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ -

Lactose Raffinose Trehalose

-

+

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

V

+ +

-

-

+

-

n

-

Fig. 98. H. vineae. Asci with ascospores on YM after 7 days at 25''C. Bar=10^im.

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate Growth at 34T + Starch formation Growth at 37°C 0.01% Cycloheximide + Co-Q: 6 (Yamada et al. 1976a, Billon-Grand 1987). Mol% G + C: 38.8^0.7, 9 strains, including CBS 277, CBS 2171, CBS 6555 {T^: Meyer et al. 1978); 39.6, CBS 8031 (T^: Smith and Foot 1985).

Origin of the strain studied: CBS 2171 (ATCC 58436), vinyard soil, van der Walt; CBS 277 (ATCC 24232) soil, Klocker, type strain of Pseudosaccharomyces africanus; CBS 2568, Drosophila persimilis, Phaff"; CBS 2827, soil, Capriotti; CBS 5068, unknown, Verona; CBS 6555 (ATCC 20109), unknown, Takeda Chem. Ind.; CBS 6706, unknown, Nakase; CBS 8031 (ATCC 46412), black knot gall Dibotryon morbosum on Prunus uirginiana, Lachance, type strain of H. nodinigri; ATCC 10632, sour Calimyrma fig; ATCC 16512, unknown, Kyowa Perm. Ind. Co., Ltd. Type strain: CBS 2171, isolated by van der Walt, South Africa. Comments: Hanseniaspora vineae was placed in synonymy with H. osmophila by Miller and PhafF (1958) and maintained as a synonym by Phaff (1970a). However, Meyer et al. (1978) separated the two species since the average DNA reassociation value was 48%. In view of more recent interpretations of DNA relatedness (Kurtzman and Phaff 1987), these values would suggest these two taxa to be sibling species or possible varieties of the same species. The conspecificity of//, nodinigri and //. vineae was shown by DNA homology studies (Smith and Poot 1985). Comments on the genus Miller and PhafF (1958) published a detailed study of the history, nomenclature, physiology, morphology and life cycle of all Hanseniaspora species. Antigenic analyses of some Kloeckera and Hanseniaspora species were carried out by Tsuchiya et al. (1966) and Tsuchiya and Imai (1968). In the former study, 3 serological groups were found, viz. K. javanica, K. africana and K. apiculata, and the relationship of K. apiculata with H. valbyensis

220

Vb. Descriptions of teleomorphic ascomycetous genera and species

was recognized. In addition, K. jauanica appeared to be a hybrid species of K. apiculata and K. africana. In the latter study, the authors concluded that (1) ^ . apiculata was the anamorph of H. uvarum and H. guilliermondii; and (2) K. africana was the anamorph of H. osmophila and H. vineae. A comparative study on the ultrastructure of the different types of ascospores in Hanseniaspora species was performed by Kreger-van Rij and Ahearn (1968) and by Kreger-van Rij (1977b). These studies showed the presence of three types of ascospores: (a) hat-shaped in H. guilliermondii and H. valbyensis; (b) spheroidal with an equatorial or sub-equatorial ledge, and smooth or warty in H. occidentalis and H. uuarum; (c) spheroidal with warts in H. osmophila and H. vineae. Spencer and Gorin (1968) carried out PMR spectrometric studies of mannans isolated from species of the genera Hanseniaspora and Kloeckera. Yamada et al. (1976a) studied the coenzyme Q systems in apiculate yeast genera, namely Hanseniaspora, Kloeckera, Nadsonia, Saccharomycodes and Wickerhamia. The Co Q-6 system was found in all species analyzed except for Wickerhamia, which had a Co Q-9 system. The authors discussed their results in relation to other criteria, such as PMR spectra of cell wall polysaccharides, DNA base composition and serological characteristics. Billon-Grand (1987) investigated the occurrence of minor components of coenzyme Q systems in Hanseniaspora and Kloeckera. In addition to the major component Co Q-6, this author found Co Q-7 as a minor component in H. uvarum, H. valbyensis and H. nodinigri. Fiol and Billon-Grand (1978a) examined the production of intracellular oxidases, nitrite and nitrate reductases in some species of Hanseniaspora and Kloeckera and discussed the taxonomic relationships between the two genera.

The significance of DNA base composition in the classification of Hanseniaspora was studied by Nakase and Komagata (1970a) and Meyer et al. (1978). The latter authors established the status of various Hanseniaspora species by DNA-DNA reassociation experiments and correlated Hanseniaspora teleomorphs with Kloeckera anamorphs. Yamada et al. (1992c) estimated the phylogenetic relationships of the teleomorphic apiculate yeast genera Hanseniaspora, Nadsonia and Saccharomycodes on the basis of partial rRNA sequences. Their data demonstrated the three genera to be distinct from each other. However, the six species of the genus Hanseniaspora were divided into two clusters, one cluster consisted of H guilliermondii, H uvarum and H. valbyensis, the second cluster consisted of H occidentalis, H osmophila and H vineae. Yamada et al. (1992c) considered the two clusters as genera and reinstated the genus Kloeckeraspora to accommodate the latter three species, which are characterized by spheroidal, warty ascospores. This genus, introduced by Niehaus (1932) to accommodate apiculate species producing spheroidal ascospores, was considered a synonym of Hanseniaspora by various authors (Lodder and Kreger-van Rij 1952, Phaff 1970a, Meyer et al. 1978, Smith 1984). A second phylogenetic study on Hanseniaspora and possible related genera (Boekhout et al. 1994) based on partial 26S rDNA nucleotide sequences, demonstrated that the genus Hanseniaspora is monophyletic and could be divided into the same subgroups as in the study of Yamada et al. (1992c,e). However, Boekhout et al. argued for maintenance of all species in Hanseniaspora on the basis of both the heterogeneous distribution of phenetic properties among species of this genus as well as the low statistical support in the 26S rDNA tree for separation of the two subgroups.

35. Issatchenkia Kudryavtsev emend. Kurtzman, Smiley & Johnson / C.P. Kurtzman

221

35. Issatchenkia Kudryavtsev emend. Kurtzman, Smiley & Johnson C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal, ellipsoidal or elongate, and pseudohyphae are present. Asci are unconjugated when formed from diploid cells or may be conjugated if formed by the pairing of complementary mating types. Asci are persistent and form \-A roughened spheroidal ascospores. The protuberances causing ascospore roughness may not be visible under the light microscope. Glucose is fermented. Nitrate is not assimilated. Early formation of pellicles on liquid media. Diazonium blue B reaction is negative. Type species Issatchenkia orientalis Kudryavtsev Species accepted \. Issatchenkia occidentalis Kurtzman, Smiley & Johnson (1980) 2. Issatchenkia orientalis Kudryavtsev (1960) 3. Issatchenkia scutulata (Phaff, M.W. Miller & Miranda) Kurtzman, Smiley & Johnson (1980) a. Issatchenkia scutulata (Phaff, M.W. Miller & Miranda) Kurtzman, Smiley & Johnson var. scutulata (1980) b. Issatchenkia scutulata var. exigua (Phaff, M.W. Miller & Miranda) Kurtzman, Smiley & Johnson (1980) 4. Issatchenkia terricola (van der Walt) Kurtzman, Smiley & Johnson (1980) Key to species See Table 26. 1. 2(1). 3(2). 4(2).

a b a b a b a b

Growth in vitamin-free medium -^ 2 Growth absent in vitamin-free medium D-Glucosamine assimilated -^ 3 D-Glucosamine not assimilated -^ 4 Growth at 40''C Growth absent at 40°C Growth in osmotic medium (10% sodium chloride/5% glucose in yeast nitrogen base) Growth absent in osmotic medium

/. terricola: p. 225 /. orientalis: p. 222 /. occidentalis: p. 221 /. scutulata var. scutulata: p. 224 /. scutulata var. exigua: p. 224

Table 26 Key characters of species in the genus Issatchenkia Species

Fermentation ^

Issatchenkia occidentalis /. orientalis /. scutulata var. scutulata /. scutulata var. exigua /. terricola

Assimilation

Growth

D-Glucosamine Glycerol

+ + + w/s +/w

+ + _ -

+

Citrate

Vitamin-free medium

+/w _ w/-

+ + + + -

+ +/s _ +

Osmotic medium^ 37''C + + + _ -

+ + _ v

40''C + _ -

^ 10%) sodium chloride/5% glucose in yeast nitrogen base.

Systematic discussion of the species 35.1. Issatchenkia occidentalis Kurtzman, Smiley & Johnson (1980b) Anamorph: Candida sorbosa Hedrick & Burke ex van Uden & H.R. Buckley Synonyms: Candida sorbosa Hedrick & Burke (1951) nom. nud. Candida sorbosa Hedrick & Burke ex van Uden & H.R. Buckley (1970) Candida soli Okuma & S. Goto (Goto et al. 1987b)

Growth on 5% malt extract agar: After 3 days at 25T, the cells are ovoidal to elongate, (2.2-4.3)x(3.29.3) jJim, and single or in pairs. Growth is butyrous and light cream colored. Growth on the surface of assimilation media: Dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and moderately well-branched pseudohyphae. Aerobic

Vb. Descriptions of teleomorphic ascomycetous genera and species

222

growth is white to tannish-white, dull, butyrous, striated, and slightly raised with a flattened center. The margin is smooth, finely serrate, or with small lobes. Colonies are fi-inged with pseudohyphae. A faintly acidic odor is present. Formation of ascospores: Asci are unconjugated, persistent, and form one or two roughened ascospores (Fig. 99). Electron microscopy may be required to discern the protuberances on spore walls (Kurtzman and Smiley 1974, Kurtzman et al. 1980b). Isolation of single spores demonstrated this species to be heterothallic (Kurtzman and Smiley 1976). Following conjugation of complementary mating types, zygotes usually give rise to a succession of diploid cells that sporulate; consequently, conjugated asci are rarely, if ever, observed. Ascospores were observed on autoclaved cucumber and carrot wedges afl:er 3-6 weeks at 25°C. Sporulation is usually sparse. Fermentation: Glucose Galactose Sucrose Maltose

+

Lactose Raffinose Trehalose

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

—

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

V

-

+

-

+ +/w

-

+/w +

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37T + 10% NaCl/5% glucose + Growth at 40T Co-Q: 7 (CBS 5459, Y. Yamada, personal communication). Mol% G + C: 40.9-41.1, two strains, CBS 5459, CBS 1910 (BD: Kurtzman et al. 1980b).

Origin of the strains studied: NRRL Y-7552 (CBS 5459), spoiled figs?, Phaff, U.S.A., originally identified as a citrate-negative strain of Pichia kudriavzevii (Kregervan Rij 1970c); NRRL Y-7767 (CBS 1910), type strain

\j-

Fig. 99. /. occidentalis, CBS 5459. Unconjugated ascus with ascospores, after 1 month on an autoclaved cucumber wedge at 25°C. Bar = 5 |im.

of Candida sorbosa from feces of a fly (Drosophila crucigera), Hedrick, Hawaii, U.S.A.; NRRL Y-7768 (CBS 2107), 'tea fiingus', Boedijn, Indonesia. Complementary mating types: NRRL Y-7552-61 (CBS 6887) and NRRL Y-7552-62 (CBS 6888), both single-ascospore isolates from the type strain. Type strain: CBS 5459 (NRRL Y-7552), a diploid strain received from Phaff, U.S.A. Comments: /. occidentalis was initially classified as a strain of/, orientalis, but Kreger-van Rij (1970c) noted that this strain (CBS 5459) differed from the others in being sorbose-positive and citrate-negative. Kurtzman and Smiley (1976) demonstrated this strain to be heterothallic and that one of the mating types conjugated with the type strain of Candida sorbosa and formed ascospores. The other strains of/, orientalis and several strains of Candida krusei also conjugated with one of the mating types, but the frequency was quite low and no ascospores formed. DNA reassociation studies by Kurtzman et al. (1980b) showed / occidentalis and C. sorbosa to have 98% base sequence complementarity, thus confirming the teleomorph-anamorph relationship demonstrated by mating tests. The extent of DNA reassociation among strains of / orientalis and C krusei was 93-100%, but when DNA from these strains was compared with that from / occidentalis, only 8% common sequences were detected. Consequently, evidence from both mating tests and DNA studies shows the presence of two taxa, but a close relationship is suggested. The heterothallic diploid type strain of / occidentalis was shown to be heterozygous for L-sorbose assimilation; therefore, this compound is of questionable utility for separating / occidentalis from / orientalis. 35.2. Issatchenkia orientalis Kudryavtsev (1960) Anamorph: Candida krusei (Castellani) Berkhout Synonyms: Saccharomyces krusei Castellani (1910?) Endomyces krusei Castellani (1912b) Monilia krusei (Castellani) Castellani & Chalmers (1913) Candida krusei (Castellani) Berkhout (1923)

223

35. Issatchenkia Kudryavtsev emend. Kurtzman, Smiley & Johnson / C.P. Kurtzman Myceloblastanon krusei (Castellani) Ota (1928) Geotrichoides krusei (Castellani) Langeron & Talice (1932) Trichosporon krusei (Castellani) Ciferri & Redaelli (1935) Mycotoruloides krusei (Castellani) Langeron & Guerra (1935) lEnantiothamnus braulti Pinoy (Brault and Masselot 1911) IBlastodendrion braulti (Pinoy) Langeron & Talice (1932) Monilia parakrusei Castellani (Castellani and Chalmers 1919) Myceloblastanon parakrusei (Castellani) Ota (1928) Castellania parakrusei (Castellani) Dodge (1935) Candida parakrusei (Castellani) Langeron & Guerra (1938) Mycoderma cheualieri Guilliermond (1914) Candida cheualieri (Guilliermond) Westerdijk (in CBS catalogue, 1933) Mycoderma monosa Anderson (1917) Mycoderma bordetii Kufferath (1920) Monilia inexpectata Mazza, Nino & Egiies (1930) Mycocandida inexpectata (Mazza, Niiio & Egues) Talice & Mackinnon (1934) Pseudomonilia inexpectata (Mazza, Nino & Egiies) Dodge (1935) Trichosporon dendriticum Ciferri & Redaelli (1935) nom. nud. Candida dendritica (Ciferri & Redaelli) Dodge & Moore (1936) 7Castellania africana (Macfie) Dodge (1935) 1 Castellania balcanica (Castellani & Chalmers) Dodge (1935) Monilia krusoides Castellani (1937a) Pseudomycoderma miso Mogi (1939) nom. nud. Candida castellanii van Uden & Assis-Lopes (1953b) Candida tamarindi Lewis & Johar (1955) nom. nud. Procandida tamarindii (Lewis & Johar) Novak & Zsolt (1961) Candida lobata Batista & Silveira (1959c) Endoblastomyces thermophilus Odincova ex Kudryavtsev (1960) Candida requinyii Szep & Novak (1963) Candida soosii Novak (1964) Pichia orientalis (Kudryavtsev) Kreger-van Rij (1964b) [non Saccharomyces orientalis Beijerinck (1898a) nee Pichia orientalis (Beijerinck) Guilliermond (1912)] Pichia kudriavzeuii Boidin, Pignal & Besson (1965b) Candida acidothermophilum Masuda, Kato, Takayama, Kida & Nakanishi (1975) Candida brassicae Amano, S. Goto & Kagami (1975) Candida ethanothermophilum Masuda, Kato, Takayama, Kida & Nakanishi (1975) ICandida melinii Diddens & Lodder var. melobiosica NowakowskaWaszczuk & Pietka (1983) Candida hinoensis Iwasaki & S. Goto (Goto et al. 1987b) Candida solicola Endo, Okuma & S. Goto (Goto et al. 1987b)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are ovoidal to elongate, (1.3-6.0)x(3.314.0) |im, and single or in pairs. Growth is butyrous and light cream colored. Growth on the surface of assimilation media: Heavy, dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25*'C, growth under the coverglass shows abundant and moderately branched pseudohyphae. Aerobic growth is tannish-white, dull to occasionally almost powdery, butyrous, low convex with aflattenedcenter, margin varying from smooth to lobed, and fringed with pseudohyphae. Some cultures have a faintly acidic odor. Formation of ascospores: Ascospores were not observed in the present study. Kudryavtsev (1960) reported the spores to be spheroidal, smooth under the light microscope, and one per ascus. Asci were persistent. Two of the three strains observed by Kreger-van Rij (1970c)

had occasional asci with one to two spheroidal ascospores, but the infrequency of spores prevented their observation under the electron microscope. Fermentation: Glucose Galactose Sucrose Maltose

+

Lactose Raffinose Trehalose

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+

-

+ +

-

+ + +/w

-

+

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate Starch formation Gelatin liquefaction 5 -Keto-D-gluconate Saccharate Growth at 37''C 10% NaCl/5% glucose Growth at 40°C + Co-Q: 7 (Yamada et al. 1973a). Mol% G + C: 39.7^0.3, CBS 5147, CBS 573 and four other (BD: Kurtzman et al. 1980b).

-

w/+ + strains

Origin of the strains studied: Isolates originally reported to form ascospores: CBS 5147, fruit juice or berries, Kudryavtsev, Russia; CBS 2911, tea beer, Netherlands; CBS 5590, unknown, Suomalainen, Finland. Isolates received as Candida krusei: bronchomycosis (1); vaginitis (1); human feces (1); human urine (1); mastitic cow (2); animal feces (4); fruit flies (Drosophila spp.) (5); ginger beer (1); apple cider (1); stored rice (1); stored corn (2); bread (1); fermented foods (3); dairy products (3); industrial fermentation (1); yeast cake (1); tree exudates (2); seawater (1); unknown (15). Type strain: CBS 5147 (NRRL Y-5396), received from Kudryavtsev, Russia. Comments: Candida krusei is considered to represent the anamorphic form of /. orientalis because the type strains, as well as other isolates of both species, showed significant (93-100%) DNA base sequence complementarity (Kurtzman et al. 1980b). C requinyii also showed significant base sequence relatedness with C. krusei and /. orientalis but not with /. occidentalis. The relationship between /. orientalis and /. occidentalis is discussed in the section on the latter species. /. orientalis and its anamorph C. krusei are isolated

Vb. Descriptions of teleomorphic ascomycetous genera and species

224

from a wide variety of habitats including humans and animals. Hurley et al. (1987) summarized clinical evidence supporting the concept that C krusei should be considered pathogenic rather than a transient saprophyte. 35.3. Issatchenkia scutulata (Phaff, M.W. Miller & Miranda) Kurtzman, Smiley & Johnson (1980b) This species has two varieties: Issatchenkia scutulata (Phaff, M.W. Miller & Miranda) Kurtzman, Smiley & Johnson van scutulata (1980) Synonym: Pichia scutulata Phaff, M.W. Miller & Miranda var. scutulata (1976)

Issatchenkia scutulata var. exigua (Phaff, M.W. Miller & Miranda) Kurtzman, Smiley & Johnson (1980) Synonym: Pichia scutulata var. exigua Phaff, M.W. Miller & Miranda (1976)

Grovv^th on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to elongate, (2.9-5.5)x(3.510.0) fxm, and single or in short chains. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Moderate to heavy, dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass is composed of moderately branched pseudohyphae. Aerobic growth is tannish-white, butyrous, low convex with a depressed center, and with a finely lobed margin. There is a faintly acidic odor. Formation of ascospores: Asci are persistent, unconjugated and usually form four (one to four) spheroidal, roughened spores in diamond-shaped tetrads (Fig. 100). The species is heterothallic and four-spored asci give two spores of each mating type. Asci arising from a mixture of complementary mating types are generally unconjugated because of proliferation of diplophase cells before sporulation. Ascospore roughness is visible only under the electron microscope and results from small pro-

0

Uy'^ii

V ' ' ' ^'^^'•

Fig. 100. /. scutulata var. scutulata, CBS 6670. Unconjugated ascus with ascospores after 2 weeks on YM agar at 25°C. Bar=5 |im.

tuberances originating in the inner spore wall (Kurtzman et al. 1980b). Ascospores were observed for both varieties on YMand 5% Difco malt extract agar after 1-2 weeks at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + +/w + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37°C 10% NaCl/5% glucose + Co-Q: 7 (Y. Yamada, personal communication). Mol% G + C: 32.6-33.0, three strains of the variety scutulata; 32.432.6, three strains of the variety exigua (BD: Phaff et al. 1976).

Supplementary description of /. scutulata var. exigua: The variety exigua does not assimilate glycerol or grow in osmotic medium (10% NaCl/5% glucose) but does assimilate A^^-acetyl-D-glucosamine, and these differences allow it to be separated from the variety scutulata using standard growth tests. Furthermore, glucose fermentation is slow or weak. Morphologically, the varieties are similar. Asci of the variety exigua are frequently diamond-shaped, but a linear arrangement of ascospores is not uncommon. Ascospore ultrastructure is similar to that of the variety scutulata except that the protuberances seem to arise from the outer layer of the spore wall. The variety exigua is also heterothallic. Origin of the strains belonging to the variety scutulata: Slimefluxof sandalwood (Myoporum sandwicense), Hawaii, U.S.A. (3). Complementary mating types: NRRL Y-7663-2 (CBS 6672) and NRRL Y-7663-3 (CBS 6673), both single-ascospore isolates from the type strain. Type strain: CBS 6670 (UCD-FST 71-102, NRRL Y-7663) received from Phaff.

35. Issatchenkia Kudryavtsev emend. Kurtzman, Smiley & Johnson / C.P. Kurtzman

225

Origin of the strains belonging to the variety exigua: Insect boring in sitka spruce (Picea sitchensis), '-•i#.; Washington, U.S.A. (1); slime flux of black cottonwood (Populus trichocarpa), British Columbia, Canada (1); slime flux of willow {Salix sp.), British Columbia, Canada (1). Complementary mating types: NRRL Y-10920-3 (CBS 8067) and NRRL Y-10920-4 (CBS 8068), both obtained as single-ascospore isolates from the type strain. Type strain: CBS 6836 (UCD-FST 68-979B1, NRRL Y-10920), isolated from an insect boring in sitka spruce, Washington, U.S.A.; received from Phaff. Comments: Phaff et al. (1976) separated the two varieties because of the physiological differences enumerated above and on the basis of geographically separate habitats. Fig. 101. /. terricola, CBS 2617xCBS 6893. Cluster of 2-spored Kurtzman et al. (1980b) determined the extent of nuclear unconjugated asci after 3 weeks on 5% malt extract agar at 25°C. Bar=5|im. DNA base sequence complementarity between the two Ascospores were observed on YM-, 5% Difco malt varieties to be only 25%, and this would suggest that they are separate species (Price et al. 1978, and references cited extract-, and V8 agar after 1-3 weeks at 25°C. therein). However, intervarietal matings gave asci with Fermentation: +/w Lactose spores that appeared normal and a small number of the Glucose Galactose Raffinose spores proved viable. Sib-matings between these progeny Sucrose Trehalose gave viable spores. On the basis of this intervarietal Maltose fertility, the variety designations have been maintained. Assimilation: 35.4. Issatchenkia terricola (van der Walt) Kurtzman, Smiley & Johnson (1980b) Synonyms: Pichia terricola van der Walt (1957) Saccharomyces terricolus (van der Walt) Novak & Zsolt (1961)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to elongate, (2.4-5.8)x(3.014.7) |im, and single or in pairs. Growth is butyrous and tannish-cream in color. Growth on the surface of assimilation media: Moderate to heavy, dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows poorly to moderately branched pseudohyphae. Aerobic growth is white to tannish-white, dull to faintly glistening, butyrous, low convex with a flattened center, and a lobed margin. The odor is faintly acidic. Formation of ascospores: Asci are unconjugated, persistent and contain one to four, but usually two, spheroidal spores. Ascospores are roughened as a result of protuberances which originate in the outer spore wall, and this roughness can usually be perceived in the light microscope (Fig. 101). Kurtzman and Smiley (1976) demonstrated this species to be heterothallic. During laboratory cultivation, diploid cultures frequently become haploid to the exclusion of one mating type, and the type strain as well as several other cultures are now asporogenous haploids. Asci arising from a mixture of complementary mating types are usually unconjugated because of the proliferation of diploid cells before sporulation.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

iV-Acetyl-D-glucosamine

-

Methanol + Ethanol + Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate + Succinate Citrate w/Inositol Hexadecane Nitrate Vitamin-free Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation Gelatin liquefaction 5 -Keto-D-gluconate V Saccharate Growth at 37*'C 10% NaCl/5% glucose V Growth at 40*'C Co-Q: 7 (Yamada et al. 1973a). Mol% G + C: 37.9, 38.2, CBS 2617, NRRL Y-8218 (BD: Kurtzman et al. 1980b).

Origin of the strains studied: Soil, South Africa (1); soil, Italy (1); soil, Louisiana, U.S.A. (2); cherry juice (1); dregs of pressed grapes, Italy (1); sea water (1); spoiled figs, U.S.A. (1); old wine (1). Complementary mating types: NRRL YB-4310 (CBS 2617) and NRRL Y-7549-25 (CBS 6893). Type strain: CBS 2617 (NRRL YB-4310), soil isolate received from van der Walt, South Africa.

226

Vb. Descriptions of teleomorphic ascomycetous genera and species

Comments on the genus Kudryavtsev (1960) described the monotypic genus Issatchenkia on the basis of certain strains isolated from berries and fruit juices. The cultures formed spores that were spheroidal and smooth when observed with the light microscope. Asci were persistent and contained one spore. Kreger-van Rij (1964b) transferred the single species to the genus Pichia as P. orientalis, but Boidin et al. (1965b) pointed out that the name had been used previously and proposed the new name P. kudriavzevil Pichia terricola and P scutulata were two other species phenotypically similar to P kudriavzevil Scanning electron microscopy showed the former two species and /. occidentalis to have warty ascospore walls, and in this respect, to differ from other spheroidal-spored species of Pichia which have essentially smooth spore walls (Kurtzman and Smiley 1974, Phaff et al. 1976).

Despite their similarity in ascospore surface structure to species of Debaryomyces and Torulaspora (Kurtzman et al. 1975), these three species do not exhibit the cell-bud conjugation typical of Debaryomyces or the protuberances on asci that are associated with sporulation in Torulaspora. Furthermore, all species now assigned to Issatchenkia have Q-7 ubiquinone in the electron transport system while all Saccharomyces and Torulaspora species have Q-6 ubiquinone. Species of Debaryomyces and the remainder of the Pichia species with spheroidal spores have Q-9 ubiquinone (Yamada et al. 1973a, 1976b, 1977; Yamada, personal communication). Peterson and Kurtzman (1990) estimated phylogenetic relatedness among Issatchenkia spp. from extent of nucleotide substitution in three regions of rRNA. /. terricola was the most divergent member of the group.

227

36. Kluyueromyces van der Walt emend, van der Walt / M.A. Lachance

36. Kluyveromyces van der Walt emend, van der Walt M.A. Lachance Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are ovoidal, ellipsoidal, cylindrical to elongate. Pseudomycelium may be formed. True hyphae are not produced. Conjugation may or may not precede ascus formation. The ascospores are smooth, reniform, bacilliform, ellipsoidal or spheroidal, tending to agglutinate after liberation. One to four, or in some species, many ascospores are formed per ascus. Glucose is fermented vigorously. Nitrate is not assimilated. Diazonium blue B reaction is negative. Type species Kluyveromyces polysporus van der Walt Species accepted 1. Kluyveromyces aestuarii (Fell) van der Walt (1971) 2. Kluyveromyces africanus van der Walt (1956) ?i. Kluyveromyces bacillisporus Lachance, Phaff & Starmer (1993) 4. Kluyveromyces blattae Henninger & Windisch (1976) 5. Kluyveromyces delphensis (van der Walt & Tscheuschner) van der Walt (1971) 6. Kluyveromyces dobzhanskii (Shehata, Mrak & Phaff) van der Walt (1971) 7. Kluyveromyces lactis (Dombrowski) van der Walt (1971) a. Kluyveromyces lactis (Dombrowski) van der Walt var. lactis (1986) b. Kluyveromyces lactis var. drosophilarum (Shehata, Mrak & Phaff) Sidenberg & Lachance (1986) 8. Kluyveromyces lodderae (van der Walt & Tscheuschner) van der Walt (1971) 9. Kluyveromyces marxianus (B.C. Hansen) van der Walt (1971) 10. Kluyveromyces phaffii (van der Walt) van der Walt (1971) 11. Kluyveromyces polysporus van der Walt (1956) \2. Kluyveromyces thermotolerans (Filippov) Yarrow (1972) 13. Kluyveromyces waltii K. Kodama (1974) 14. Kluyveromyces wickerhamii (Phaff, M.W Miller & Shifrine) van der Walt (1971) 15. Kluyveromyces yarrowii van der Walt, E. Johannsen, Opperman & Halland (1986) Key to species See Tables 27 and 28. 1.

a b 2(1). a b 3(2). a b 4(3). a b 5(4). a b 6(2). a b 7(6). a b 8(6). a b 9(8). a b 10(1). a b 11(10). a b

Ethylamine and L-lysine assimilated strongly (groups B and C) —» 2 Ethylamine and L-lysine not assimilated strongly (group A) ^^10 Lactose assimilated -^ 3 Lactose not assimilated —^ 6 Growth in the presence of cycloheximide (lOOmg/1) -^ 4 Growth absent in the presence of cycloheximide (lOOmg/1) Melezitose assimilated Melezitose not utilized —^ 5 Inulin assimilated Inulin not assimilated Growth at 37°C vigorous -^ 7 Growth at 37°C weak or absent -^ 8 Inulin assimilated strongly Inulin utilized weakly or not at all Cellobiose assimilated Cellobiose not assimilated —> 9 Growth in the presence of cycloheximide (lOOmg/1) Growth absent in the presence of cycloheximide (lOOmg/1) 2-Keto-D-gluconate assimilated -^11 2-Keto-D-gluconate not assimilated -^ 12 Galactose assimilated Galactose not assimilated

K. aestuarii: K. lactis var. lactis:

p. 229 p. 233

K. marxianus: p. 236 K. wickerhamii: p. 242 K. marxianus: p. 236 K. lactis var. drosophilarum: p. 234 K. dobzhanskii: p. 233 K. waltii: p. 241 K. thermotolerans: p. 240 K. blattae: p. 231 K. bacillisporus: p. 230

Vb. Descriptions of teleomorphic ascomycetous genera and species

228 12(10). a b 13(12). a b 14(12). a b 15(14). a b 16(15). a b

Sucrose assimilated -^ 13 Sucrose not assimilated —» 14 Asci multispored Asci one- to four-spored Galactose assimilated Galactose not assimilated ^15 Ascospores spherical, produced only after mixing compatible cultures Ascospores ellipsoidal to reniform, produced in single cultures -^ 16 Asci multispored (1 to 16 or more ascospores) Asci one- to four-spored

K. polysporus: K. lodderae: K. delphensis:

p. 239 p. 235 p. 232

K. yarrowii:

p. 243

K. africanus: K. phaffii:

p. 230 p. 239

Table 27 Key characters of Kluyueromyces group A species Species

Assimilation/fermentation^ Gal Su/Raf Tre

Kluyueromyces

+^

+^

Eth

+/s^ s/-

Gly

Glu

Laa

Sue

Cit

+

+

w/-

w/s

+/s

+

-

Other'' 2Kg EtN -

Lys

-

Cad G50

-

-

-

Cyc

-

Aaf

37C

SpS'^ SpN Sex^

+

w/-

e/r

100 Hom

polysporus K. lodderae

+^

+^

+^

K. phaffii

+^

-

- S / - + S

K. yarrowii

+^

-

-

w/s

V

K. africanus

+/w^

_

_

_ -

K. blattae

+^

-

-

K. bacillisporus

-

w/s

-

K. delphensis

-

-

w/s

s

s

+

w/-

+

-

e/r

4

Hom

-

-

-

-

-

-

-

-

-

+

-

e/r

4

Hom

-

-

-

-

-

-

-

-

-

-

+

-

s

4

Het

^^/-

_

_

_

YV/_ g/r

16

Hom

w/-

-

-

s/e

4-9

Hom

s

+

_

_

4-8

Hom

+

s

w

-

4

Hom

-

-

_

-

s/-

_

_

_

-

+

-

-

+

-

-

-

-

+/s

_

_

_

-

-

-

_

v

-

_

w/s

+

-

^

-

-

-

s

-

+

w b f

w/s

-

+

+

r

^ Abbreviations: Gal, galactose; Su/Raf, sucrose and raffinose; Tre, trehalose; Eth, ethanol; Gly, glycerol; Glu, D-gluconic acid; Laa, DL-lactate; Sue, succinate; Cit, citrate; 2Kg, 2-keto-D-gluconate; EtN, ethylamine HCl; Lys, L-lysine; Cad, cadaverine; G50, 50% glucose-yeast extract agar. ^ Abbreviations: Cyc, growth in cycloheximide lOOmg/1; Aaf, amino acid-free; 37C, growth at 37°C; SpS, spore shape; SpN, spore number; Sex, sexuality. *^ Abbreviations: bf, bacilliform; e, ellipsoidal; r, reniform; s, spheroidal. ^ Abbreviations: Hom, homothallic; Het, heterothallic. ^ Fermented also.

Table 28 Key characters of Kluyueromyces groups B and C species Species

Other^

Assimilation/fermentation ^ Gal

aGl

Tre

Lac

In

Ce/Sal

Xyl

Laa

Sue

Cit

G50

Cyc

37C

SpS^ Sex'^

Group B dobzhanskii

+^

+^

+

+

s/-

+/s

+

V

s/-

w/-

r

Hom

+^

v^

v^

-

-

K lactis var. drosophilarum

v^

V

V

V

+

V

V

+

s/r

Hom

K lactis var. lactis

+^

v^

+^

+^

V

+

V

V

+

V

w/-

s/e

Het

+/s^

-

-

w/-

v^

+^

V

+/s

+

+

V

+

s/r

Hom

-

+/w

+

V

V

V

r

Hom

+

-

+

+

-

s/e

Hom

s/-^

-

-

-

-

Kluyueromyces

K

marxianus

K

wickerhamii

K aestuarii

+^ +^

s/-

+

w/-

+

-

-

-

-

+

V

s

Hom

w/s

w/-

s

Hom

Group C K

thermotolerans

K. waltii

+^

+^

+^

-

-

-

-

s

V

^ Abbreviations: Gal, galactose; aGl, maltose/melezitose/a-methyl-D-glucoside; Tre, trehalose; Lac, lactose; In, inulin; Ce/Sal, cellobiose and salicin; Xyl, D-xylose; Laa, DL-lactate; Sue, succinate; Cit, citrate. ^ Abbreviations: G50, 50% glucose-yeast extract agar; Cyc, growth in cycloheximide lOOmg/1; 37C, growth at 37''C; SpS, spore shape; Sex, sexuality. '^ Abbreviations: e, ellipsoidal; s, spheroidal; r, reniform. ^ Abbreviations: Hom, homothallic; Het, heterothallic. ^ Fermented also.

36. Kluyueromyces van der Walt emend, van der Walt / M.A. Lachance

229

Systematic discussion of the species 36.1. Kluyveromyces aestuarii (Fell) van der Walt (1971) Synonyms: Saccharomyces aestuarii Fell (1961) Kluyveromyces aestuarii (Fell) van der Walt (1965c) nom. inval. Zygofabospora aestuarii (Fell) Naumov (1987b)

Growth on YM agar: After 3 days at 25''C, the cells are globose to ellipsoidal, (2-6) x (3-7) ^im, single, in pairs or in short chains. Growth is butyrous, white to deep ochre because of pulcherrimin production, and glossy or dull. Growth in glucose-yeast extract broth: A sediment and a thin pellicle are formed. Dalmau plate culture on corn meal agar: After two weeks a rudimentary pseudomycelium is formed.

Fig. 102. Asci of ^. aestuarii, CBS 4438, after 2 weeks on YM agar. Bar = 5|im.

Formation of ascospores: Conjugation between cells of the same culture or between bud and parent-cell usually precedes ascus formation. One to four spheroidal to ellipsoidal ascospores with central refringent globules are formed (Fig. 102). The spores are liberated from the ascus soon after formation and tend to agglutinate. Abundant sporulation occurs after 2-A days at 17-25°C on most commonly used media. Both strains studied were sporogenous.

Origin of the strains studied: CBS 4438, marine mud, Biscayne Bay, Fell, U.S.A.; CBS 4904, sea water, Torres Strait, van Uden, Portugal. Type strain: CBS 4438, isolated by Fell from marine mud. Comments: K. aestuarii is presumed to be a marine species, although special physiological adaptations to saline environments have not been fully documented. Growth characteristics are not substantially different from those of several other typical members of the genus whose habitats are terrestrial plants or animals, except that in the presence of 5 or 10% sodium chloride on YM agar, growth and pulcherrimin production are particularly abundant, whereas no growth occurs on 50% glucose. Van der Walt and Johannsen (1984) reported variation in the utilization of maltose, trehalose and D-xylose. In this laboratory, the type strain grew weakly on the first two sugars after 3 weeks, but neither strain was seen to assimilate D-xylose. A moderately close relationship between K. aestuarii and certain other Kluyueromyces species has long been suspected on the basis of similarity in morphology and physiology (van der Walt 1970c, Martini et al. 1972, Poncet 1973b, Johannsen 1980), including |3-galactosidase activity and abundant pulcherrimin formation. K. aestuarii, although homothallic, reacts to the a mating pheromone of K. lactis and forms zygotes with haploid cells of that mating type (Herman 1970). Attempts to document a measurable degree of relatedness by DNA reassociation (Martini 1973, Vaughan-Martini and Martini 1987b, Fuson et al. 1987), immunological cross-reactivity of (3-glucanase (Lachance and Phaff 1979), or prototrophic hybrid selection (Johannsen 1980) had negative results, but some recent studies provided such evidence. K. aestuarii possesses, in its ribosomal DNA, a BainY{\ restriction site shared only with K. lactis, K. marxianus, and K. wickerhamii, and a Kpn\ site shared only with K. lactis, K. marxianus, K. dobzhanskii, K. delphensis, and the multispovQd Kluyueromyces species (Lachance 1989). Also, electrokaryograms of K aestuarii are quite typical

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+

-

+ + + + w/+ w/+

-

+

-

Lactose Raffinose Trehalose Inulin iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

-

+ +

-

+ +

-

+

-

+ +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Cadaverine L-Lysine EthylamineHCl 50% Glucose Co-Q: Not determined. Mol% G + C: 39.8-39.9,, Fuson et al. 1987).

-

+ + +

-

Gelatin liquefaction Cycloheximide lOOmg/1 Amino acid-free Growth at 37"C

-

+

-

2 strains, CBS 4438 and CBS 4904 (BD:

Vb. Descriptions of teleomorphic ascomycetous genera and species

230

of those of various K. marxianus ox K. lactis strains (Kock et al. 1988, Sor and Fukuhara 1989). Lactose assimilation combined with lack of growth in the presence of lOOmg/1 cycloheximide separate K. aestuarii from the rest of the genus. 36.2. Kluyveromyces africanus van der Walt (1956b) Grov^^th on YM agar: After 3 days at IS^'C, the cells are ovoidal, (2-5) x (3-8) |im, single, in pairs or in short chains. Conjugating cells may be present. Growth is butyrous, glossy, white to cream-colored. Growth in glucose-yeast extract broth: A sediment is formed. Dalmau plate culture on corn meal agar: After two weeks a few chains of cells may be formed. Formation of ascospores: Asci arise directly from diploid cells. One to 16 or more oblong or reniform ascospores are formed. The spores are liberated from the ascus soon after formation and tend to agglutinate. Early conjugation may be observed. Asci are formed on YM or malt extract agar after 2-5 days at 17-25°C, but mature ascospores may be difficult to see. Fermentation:

+ +

Lactose Raffinose Trehalose Inulin

-

+ +/w

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Gelatin liquefaction 2-Keto-D-gluconate Cadaverine Cycloheximide lOOmg/1 Amino acid-free L-Lysine Growth at 2>TC EthylamineHCl 50% Glucose Co-Q: Not determined. Mol% G + C: 38.5, CBS 2517 (BD: Fuson et al. 1987).

-

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

-

w/-

Additional assimilation tests and other g row characteristics:

Y-2404, NRRL Y-2405, NPIRL Y-2406, soil, van der Walt, South Africa. Type strain: CBS 2517, isolated by van der Walt from soil. Comments: K. africanus is represented by four similar strains recovered from South African soil samples. In addition to sharing many phenotypic features with other Kluyveromyces species, K. africanus is strikingly similar to Saccharomyces transvaalensis and S. dairenensis when examined by phenetic analysis. A Co-Q 6 yeast isolated from South African soil, S. transvaalensis differs by about 4% G + C from K. africanus and S. dairenensis. Unlike *S*. dairenensis, K. africanus grows weakly on most culture media. In particular, very weak growth is observed on amino acid-free yeast nitrogen base. Growth is stimulated by methionine, less by cysteine. In addition to the formation of asci with up to 16 (or more) spores, K. africanus is resolved from other Kluyveromyces species by absence of growth on sucrose, trehalose, and 2-keto-D-gluconate. Separation from K. phaffii and K yarrowii by physiological traits is tenuous. K phaffii grows slowly on D-gluconate or ethanol, K yarrowii utilizes ethanol, and K africanus utilizes neither. 36.3. Kluyveromyces bacillisporus Lachance, Phaff & Starmer (1993) Growth on YM agar: After 3 days at 25°C, the cells are ovoidal to elongate, (2-5) x (4-7) \km, single or in pairs. Growth is butyrous, glabrous, and white. Growth in glucose-yeast extract broth: A sediment is formed. Dalmau plate culture on corn meal agar: No pseudomycelium is formed. Formation of ascospores: Asci arise directly from diploid cells (Fig. 103). Four, occasionally 6 to 8 cylindrical to bacilliform ascospores are formed. The spores are liberated from the ascus 1 week after formation and tend to agglutinate.

w wA

Origin of the strains studied: CBS 2517, NRRL

Fig. 103. Asci of ^. bacillisporus, CBS 7720, after 1 week on McClary's acetate agar. Bar = 5|im. (Lachance et al. 1993, with permission of the publisher.)

231

36. Kluyueromyces van der Walt emend, van der Walt / M.A. Lachance

Asci are formed on McClary's acetate agar after 2-5 days at 17-25T.

36.4. Kluyueromyces blattae Henninger & Windisch (1976a)

Fermentation:

Growth on YM agar: After 3 days at 25°C, the cells are globose to ellipsoidal, (3-9)x(4-10)|im, single, in pairs or in short chains. Growth is butyrous, glossy, and white to cream-colored.

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

Lactose Raffinose Trehalose Inulin

-

+

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Growth in glucose-yeast extract broth: A sediment is formed.

w

Dalmau plate culture on corn meal agar: No pseudomycelium is formed.

-

-

ws

-

-

+

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Gelatin liquefaction Cadaverine Cycloheximide lOOmg/]I L-Lysine Amino acid-free + EthylamineHCl Growth at 37''C w 50% Glucose -

Co-Q: Not determined. Mol%G + C: 37.9-38.1, 2 strains, including CBS 7720 (BD: Lachance et al. 1993).

Origin of the strains studied: CBS 7720 and 2 other strains, exudate, Emory oak (Quercus emoryi Torr.), Arizona, U.S.A. Type strain: CBS 7720, isolated from Emory oak exudate. Comments: K. bacillisporus is represented by three Strains recovered from exudates of Emory oak in the vicinity of Tucson, Arizona. These trees were in close proximity to cottonwoods {Populus fremontii Wats.) and to various species of prickly pear cacti (Opuntia L. spp.), and were being visited by flies {Drosophila carbonaria Patterson & Wheeler) that also carried yeasts (Lachance et al. 1993). In view of the fact that these habitats were sampled very extensively, the small number of isolates suggests that the true habitat of K. bacillisporus may be another insect or plant. K. bacillisporus contains an unusual amount (ca. one half) of mitochondrial DNA. The significance of that observation is not clear. K. bacillisporus differs from other Kluyueromyces species by the utilization of 2-keto-D-gluconate, shared only with K. blattae, and the absence of growth on galactose, shared only with K. delphensis and K. waltil

Formation of ascospores: Asci arise directly from diploid cells. One to 8 or more spheroidal to ellipsoidal ascospores, occasionally of variable sizes, are formed (Fig. 104). The spores are liberated from the ascus soon after formation and tend to agglutinate. Immature asci are observed on YM and malt extract agar after 2-5 days at 17-25°C. Ascospores may be seen after 3 weeks. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose Inulin

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Cadaverine L-Lysine EthylamineHCl 50% Glucose Co-Q: Not determined. Mol% G + C: 34.2, CBS

+ -

Gelatin liquefaction Cycloheximide lOOmg/1 Amino acid-free Growth at 3TC

6284 (BD: Fuson et al. 1987).

Origin of the strains studied: CBS 6284 and CBS 6285, cockroach {Blatta orientalis L.), Henninger and Windisch (1976a). Type strain: CBS 6284, isolated by Henninger and Windisch from a cockroach.

Vb. Descriptions of teleomorphic ascomycetous genera and species

232

Assimilation:

Fig. 104. Ascus of K. blattae, CBS 6284, after 3 weeks on YM agar. Bar = 5|im.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

ws

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s

-

s w

-

Comments: Henninger and Windisch (1976a) described K. blattae based on the isolation of two strains from Additional assimilation tests and other gXO\ the oriental cockroach (Blatta orientalis L.). An unusual characteristics: feature of this yeast is the complete failure to grow 2-Keto-D-gluconate Gelatin liquefaction on minimal medium without amino acids, due to a Cadaverine Cycloheximide lOOmg/1 requirement for histidine. Growth (delayed) has been L-Lysine ws Amino acid-free + Growth at 3TC + reported on D-ribose (Barnett et al. 1990), but the EthylamineHCl ws observation could not be confirmed in the present study. 50% Glucose K. blattae shares with K. bacillisporus the relatively rare Co-Q: Not determined. Mol% G + C: 40.2, CBS 2170 (BD: Fuson et al. 1987). ability to assimilate 2-keto-D-gluconate, but differs from the latter by the absence of galactose assimilation. Origin of the strain studied: CBS 2170, dried figs, van 36.5. Kluyveromyces delphensis (van der Walt & der Walt and Tscheuschner. Tseuchschner) van der Walt (1971) Type strain: CBS 2170, isolated by van der Walt and Synonyms: Tscheuschner from dried figs. Saccharomyces delphensis van der Walt & Tscheuschner (1956b) Dekkeromyces delphensis (van der Walt & Tscheuschner) Novak & Zsolt (1961) nom. inval. Guilliermondella delphensis (van der Walt & Tscheuschner) Boidin, Abadie, J.L. Jacob & Pignal (1962) Kluyveromyces delphensis (van der Walt & Tscheuschner) van der Walt (1965c) nom. inval. Zygofabospora delphensis (van der Walt & Tscheuschner) Naumov (1987b)

Grov^^th on YM agar: After 3 days at 25°C, the cells are ellipsoidal, (1-4) x (2-6) |im, single, in pairs or in short chains. Growth is butyrous, glossy, and cream-colored. Grow^th in glucose-yeast extract broth: A sediment and a slight ring are formed. Dalmau plate culture on corn meal agar: No pseudomycelium is formed. Formation of ascospores: Asci arise from the conjugation of haploid cells in the same culture. One to four reniform ascospores are formed. The spores are liberated from the ascus soon after formation and tend to agglutinate. Sporulation occurs after 2-5 days at 17-25°C on YM or malt extract agar. Fermentation: Glucose Galactose Sucrose Maltose

+

-

Lactose Raflfinose Trehalose Inulin

Comments: Van der Walt and Tscheuschner (1956b) isolated K. delphensis from dried figs. Due to the availability of only a single strain, it is difficult to comment further on the ecology of this organism. Lachance and Phaff (1979) reported a high degree of similarity between the P-glucanase of that yeast and that of K. lactis. Although this has not been investigated fiirther, the possibility of gene flow between different Kluyveromyces species is not without precedent (e.g., Johannsen 1980) and should not be discounted. However, genetic exchange probably would not follow the normal path of zygote formation, as evidenced by the negative results obtained by Herman (1970) who showed that mating pheromones of K lactis have no effect on K. delphensis. Phenetically, K. delphensis is closest to K, bacillisporus and to a lesser extent to other group A species, bearing in addition a superficial resemblance with various nutritionally specialized species of Saccharomyces. A previous report of glycerol utilization (van der Walt 1970c) was not confirmed. The combined absence of assimilation of galactose, 2-keto-D-gluconate, and ethylamine sets K. delphensis apart from any other Kluyveromyces species. Separation from Saccharomyces species is based primarily on ascus persistence and ascospore morphology.

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance

36.6. Kluyveromyces dobzhanskii (Shehata, Mrak & Phaff) van der Walt (1971) Synonyms: Saccharomyces dobzhanskii Shehata, Mrak & Phaff (1955) Dekkeromyces dobzhanskii (Shehata, Mrak & Phaff) Novak & Zsoh (1961) nom. inval. Dekkeromyces dobzhanskii (Shehata, Mrak & Phaff) Santa Maria & Sanchez (1970) nom. inval. Guilliermondella dobzhanskii (Shehata, Mrak & Phaff) Boidin, Abadie, J.L. Jacob & Pignal (1962) Kluyveromyces dobzhanskii (van der Walt & Tscheuschner) van der Walt (1965c) nom. inval. Kluyveromyces marxianus (E.G. Hansen) van der Walt var. dobzhanskii (Shehata, Mrak & Phaff) E. Johannsen & van der Walt (Johannsen 1980) Zygofabospora dobzhanskii (Shehata, Mrak & Phaff) Naumov (1987b)

Growth on YM agar: After 3 days at 25°C, the cells are spheroidal, ellipsoidal to cylindrical, (2-6)x(3-ll)|im, single, in pairs or in short clusters. Growth is butyrous, glossy, and cream-colored or pink due to pulcherrimin production. Growth in glucose-yeast extract broth: A sediment and a slight ring are formed. Dalmau plate culture on corn meal agar: Well ramified pseudomycelium is formed abundantly.

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s + + + + V

+ + + +

V

+

-

V V

-

Lactose Raflfinose Trehalose Inulin iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics:

Gelatin liquefaction 2-Keto-D-gluconate Cycloheximide lOOmg/1 + Cadaverine + Amino acid-free + L-Lysine + Growth at 3TC w/EthylamineHCl + 50% Glucose v Co-Q: Not determined. Mol% G + C: 42.6, 2 strains, including CBS 2104 (BD: Fuson et al. 1987).

Origin of the strains studied: CBS 2104, Drosophila pseudoobscura Frolova, Shehata et al. (1955); CBS 5061 and CBS 5062, oak white pocket rot mushroom [Hymenochaeta ruboginosa (Dickson:Fr.) Lev.] and brown oak mushroom Fistulina hepatica Huds. ex Fr., Boidin, France; climbing shrub [Actinidia arguta (Sieb. & Zucc.) Planch, ex Miq.], herbaceous perennial {Chloranthus japonicus Sieb.), white nut tree [Kalopanax septemlobus (Thunb.) Koidz.], and magnolia vine [Schisandra chinensis (Turcz.) Baill.], near Vladivostok, Golubev, USSR; numerous strains from black knot [Dibotryon morbosum (Schw.) Theissen & Sydow] of chokecherry (Prunus virginiana L.), and from Drosophila Fallen spp., Ontario, Canada. Type strain: CBS 2104, isolated by Shehata et al. (1955) from Drosophila pseudoobscura.

+ +

Comments: K. dobzhanskii is associated with £)ra5o/7/i//a and related insect habitats such as plants and macrofungi. Very similar in many ways to K. lactis var. drosophilarum, it nevertheless represents a fully speciated entity, as evidenced by DNA reassociation (Martini 1973, Fuson et al. 1987, Vaughan-Martini and Martini 1987b), by immunological distances of (3-glucanases (Lachance and Phaff 1979), and by isoenzyme electrophoresis (Sidenberg and Lachance 1986). K. dobzhanskii can be distinguished from other Kluyveromyces species by weak growth or absence of growth at 37°C, lack of utilization of lactose, and good growth on p-glucosides (cellobiose and salicin).

-

36.7. Kluyveromyces lactis (Dombrowski) van der Walt (1971) This species has two varieties:

Formation of ascospores: Conjugation of haploid cells in the same culture or bud-parent cell conjugation may precede ascus formation, or asci may arise directly from diploid cells. One to four reniform ascospores are formed. The spores are liberated from the ascus soon after formation and tend to agglutinate. Sporulation occurs abundantly after 2-5 days at 1725°C on YM, malt extract, or McClary's acetate agar. Most strains are sporogenous. Fermentation:

233

-

+ V

-

V

-

s + + +

-

s + V

-

Kluyveromyces lactis (Dombrowski) van der Walt var. lactis (1986) Anamorph: Candida spherica (Hammer & Cordes) S.A. Meyer & Yarrow Synonyms: Saccharomyces lactis Dombrowski (1910) Zygosaccharomyces lactis Dombrowski (1910) Zygorenospora lactis (Dombrowski) Krasil'nikov (1954a) Guilliermondella lactis (Dombrowski) Boidin, Abadie, J.L. Jacob & Pignal (1962) Dekkeromyces lactis (Dombrowski) Santa Maria & Sanchez (1970) nom. inval. Kluyveromyces lactis (Dombrowski) van der Walt (1965c) nom. inval. Kluyveromyces lactis (Dombrowski) van der Walt (1971) Kluyveromyces marxianus (B.C. Hansen) van der Walt var. lactis (Dombrowski) E. Johannsen & van der Walt (Johannsen 1980)

234

Vb. Descriptions of teleomorphic ascomycetous genera and species

Zygosaccharomyces casei Sacchetti (1932a,b) Zygosaccharomyces versicolor Sacchetti (1933) Saccharomyces sociasii C. Ramirez (1954) Zygofabospora lactis (Dombrowski) Naumov (1987b) IMycoderma lactis Dombrowski (1910) Torula sphaerica Hammer & Cordes (1920) Torulopsis sphaerica (Hammer & Cordes) Lodder (1934) Cryptococcus sphaericus (Hammer & Cordes) Anderson & Skinner (1947) Candida spherica (Hammer & Cordes) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Kluyveromyces lactis van drosophilarum (Shehata, Mrak & Phaff) Sidenberg & Lachance (1986) Synonyms: Zygosaccharomyces mrakii Shehata & Mrak (1952) nom. inval. Saccharomyces drosophilarum Shehata, Mrak & PhafF(1955) Dekkeromyces drosophilarum (Shehata, Mrak & Phaff) Novak & Zsolt (1961) nom. inval. Guilliermondella drosophilarum (Shehata, Mrak & Phaff) Boidin, Abadie, XL. Jacob & Pignal (1962) Dekkeromyces drosophilarum (Shehata, Mrak & Phaff) Santa Maria & Sanchez (1970) nom. inval. Kluyveromyces drosophilarum (Shehata, Mrak & Phaff) van der Walt (1965c) nom, inval. Kluyveromyces drosophilarum (Shehata, Mrak & Phaff) van der Walt (1971) Saccharomyces drosophilarum (Shehata, Mrak & Phaff) var. acellobiosus Phaff, M.W. Miller & Shifrine (1956) nom. inval. Kluyveromyces marxianus (E.C. Hansen) van der Walt var. drosophilarum (Shehata, Mrak & Phaff) E. Johannsen & van der Walt (Johannsen 1980) Zygofabospora drosophilarum (Shehata, Mrak & Phaff) Naumov (1987b) Saccharomyces phaseolosporus Shehata, Mrak & Phaff (1955) Dekkeromyces phaseolosporus (Shehata, Mrak & Phaff) Novak & Zsolt (1961) nom. inval. Kluyveromyces phaseolosporus (Shehata, Mrak & Phaff) van der Walt (1965c) nom. inval. Guilliermondella phaseolospora (Shehata, Mrak & Phaff) Boidin, Abadie, J.L. Jacob & Pignal (1962) Kluyveromyces phaseolosporus (Shehata, Mrak & Phaff) van der Walt (1971) Zygofabospora phaseolospora (Shehata, Mrak & Phaff) Naumov (1987b) Zygofabospora krassilnikovii Kudryavtsev (1960) Dekkeromyces krassilnikovii Kudryavtsev (1960) Saccharomyces uanudenii van der Walt & Nel (1963) Kluyveromyces vanudenii (van der Walt & Nel) van der Walt (1965c) nom. inval. Kluyveromyces vanudenii (van der Walt & Nel) van der Walt (1971) Kluyveromyces marxianus (E.C. Hansen) van der Walt var. vanudenii (van der Walt & Nel) E. Johannsen & van der Walt (Johannsen 1980)

Growth on YM agar: After 3 days at 25T, the cells are ellipsoidal, (2-6) x (2-8) |im, single, in pairs or in short chains. Growth is butyrous, glossy, cream-colored or pinkish due to pulcherrimin production. Growth in glucose-yeast extract broth: A sediment and a ring are formed. A thin pellicle is usually formed. Dalmau plate culture on corn meal agar: A rudimentary pseudomycelium is usually formed. Formation of ascospores: Conjugation of haploid cells

or bud-parent cell conjugation may precede ascus formation, or asci may arise directly from diploid cells. One to four ascospores are formed. The spores range in shape from spheroidal to ellipsoidal to reniform. Sporulating strains of the variety lactis are heterothallic, whereas those in the variety drosophilarum are homothallic. The spores are liberated from the ascus soon after formation and tend to agglutinate. Sporulation occurs after 2-5 days at 17-25*'C on YM, malt extract, or McClary's acetate agar. Most strains are sporogenous. Fermentation: In the fermentation, assimilation and other characteristics, the superscript numbers indicate (1) characteristics that may differ in K. lactis var. drosophilarum, and (2) characteristics that differ in strain CBS 4693. Glucose Galactose Sucrose Maltose

+ s V V

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ V +1 +1 +1

V

+^ V

V _1

Lactose Raffinose Trehalose Inulin 7^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+^ V V _]

-

+ V

-

V

-

+' + V

+^

-

V

+ _]

Additional assimilation tests and other g;ro^ characteristics: 2-Keto-D-gluconate Gelatin liquefaction -

+2 Cadaverine Cycloheximide lOOmg/1 + +2 L-Lysine Amino acid-free +^ +2 EthylamineHCl Growth at 37T w 50% Glucose V Co-Q: 6 (Yamada et al. 1976b). Mol% G + C: 39.9-40.8, 12 strains, including CBS 683 and CBS 2105 (BD: Fuson et al. 1987).

Supplementary description of K, lactis var. drosophilarum: The variety drosophilarum does not ferment or assimilate lactose. Some strains may ferment inulin or assimilate L-arabinose. Some strains fail to assimilate cellobiose, trehalose, melezitose, mannitol, or salicin. Some strains utilize citrate. All strains grow well at 37°C. The variety lactis is heterothallic and the variety drosophilarum is homothallic. Origin of the strains belonging to the variety lactis: CBS 683, gassy cheese, Allen and Thornley (1929); CBS

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance

4693, received by CBS from Brust; numerous strains from cheese, Schmidt, France. Complementary mating types: CBS 683 (a) and CBS 739 (a). Type strain: CBS 683, isolated by Allen and Thornley from gassy cheese. Origin of the strains belonging to the variety drosophilarum: CBS 2105, Drosophila azteca Sturtevant & Dobzhansky, Shehata et al. (1955); CBS 4372, type strain of K. vanudenii, winery equipment, van der Walt and Nel (1963); CBS 2103, type strain of K. phaseolosporus, Drosophila pseudoobscura Frolova, Shehata and Mrak (1952); numerous strains from Drosophila spp., black knot [Dihotryon morbosum (Schw.) Theissen & Sydow] of chokecherry (Prunus virginiana L.), exudate of red oak (Quercus rubra L.), Ontario, Canada; Drosophila carbonaria Patterson & Wheeler, exudates of Emory oak (Quercus emoryi Torr.) and Fremont cottonwood (Populus fremontii Wats.), Arizona, Ganter et al. (1986). Type strain: CBS 2105, isolated by Shehata et al. (1955) from Drosophila azteca. Comments: K. lactis exhibits many similarities with several other Kluyveromyces species, and is even able, under certain conditions, to form hybrids with them, leading van der Walt and Johannsen (1984) to consider it a variety of K. marxianus. The rationale for restoring its full species status is discussed in later sections. On the basis of interfertility and genetic affinities, the former taxa K. drosophilarum, K. phaseolosporus, and K. vanudenii are considered conspecific with K. lactis. The division oiK. lactis into the two varieties lactis and drosophilarum was proposed by Sidenberg and Lachance (1986) and is maintained. It is arbitrarily based on physiological and ecological criteria. Lactose utilizers have arisen almost exclusively in samples from dairy products, whereas lactose-negative strains originate mostly from Drosophila or materials known to be Drosophila habitats, such as exudates and fungal pathogens of trees. That the same varietal lines seem to be followed by mating compatibility systems may or may not be accidental, but nonetheless adds another basis for maintaining the two infraspecific taxa. A clear genetic partitioning of the species is lacking, and as pointed out by Naumov (1988), division into varieties on the basis of lactose assimilation is not natural. However, until more information is available, a correct genetic definition of varieties within K. lactis is not possible. The maintenance of three separate species under the epithets lactis, drosophilarum, and phaseolosporus, as suggested by Naumov (1988), would not be consistent with the DNA reassociation values ranging from 64 to 100% (Martini 1973, Fuson et al. 1987) among representatives of these taxa and of the former designation K. vanudenii. The reassociation values are independent of former taxonomic assignments. For example, two strains previously assigned to K. vanudenii gave, respectively, 98% and 68%) heteroduplex formation

235

with the type of K. lactis var. lactis (Fuson et al. 1987). The type strain of K. phaseolosporus gave 90%) reassociation with the type of the variety lactis and 83% with the type of the variety drosophilarum. Seven strains formerly designated as K. drosophilarum had reassociation values ranging from 64 to 80% with the type of the variety lactis, and from 64%o to 86% with the type of the variety drosophilarum. The type cultures of the two recognized varieties formed 11% and 80%) heteroduplexes in reciprocal experiments. Electrokaryotypes (Sor and Fukuhara 1989) are equally perplexing. Although different strains have important differences in chromosome size distributions between the varieties, significant variation exists within the varieties as well. The conspecificity of Candida spherica and K. lactis, recognized by van der Walt (1970c), has been confirmed by Vaughan-Martini and Martini (1985) by means of DNA reassociation. K. lactis is rapidly becoming a serious competitor to Saccharomyces cerevisiae and Schizosaccharomyces pombe as a model organism. A European-based, international group of geneticists interested in K. lactis has met in 1990 and agreed to adopt a standard nomenclature of mutations and chromosomes for the species (H. Fukuhara and B.J.M. Zonneveld, personal communications). They have chosen strain CBS 2359 as standard for genetic analysis. As an example of the work being done with K. lactis, a circular plasmid of the so-called 2p family has been isolated from K. lactis var. drosophilarum (Falcone et al. 1986), and used to create a gene cloning system for K. lactis (Chen et al. 1988). Interestingly, the plasmid could be replicated in both varieties of K. lactis, but not in K. marxianus. Linear killer plasmids of K. lactis have also been used to construct vectors (Kamper et al. 1989). K. lactis has also been explored for its industrial potential. For example, the P-galactosidase from K. lactis can be used to reduce the lactose content of milk (Hussein et al. 1989). For identification purposes, K. lactis var. lactis is unique in the genus in assimilating both lactose and aglucosides. K. lactis var. drosophilarum is best recognized, among lactose-negative species that utilize ethylamine and L-lysine strongly, by its vigorous growth at 3TC. 36.8. Kluyveromyces lodderae (van der Walt & Tseheuschner) van der Walt (1971) Synonyms: Saccharomyces lodderae (as S. lodderi) van der Walt & Tseheuschner (1957a) Dekkeromyces lodderi (van der Walt & Tseheuschner) Novak & Zsolt (1961) nom. inval. Guilliermondella lodderi (van der Walt & Tseheuschner) Boidin, Abadie, J.L. Jacob & Pignal (1962) Kluyveromyces lodderi (van der Walt & Tseheuschner) van der Walt (1965c) nom. inval. Zygofabospora lodderi (van der Walt & Tseheuschner) Naumov (1987b)

Grow^th on YM agar: After 3 days at 2 5 T , the cells

236

Vb. Descriptions of teleomorphic ascomycetous genera and species

are ellipsoidal to cylindrical, (2-6)x(3-ll)|im, single, in pairs or in small clusters. Growth is butyrous, glossy to dull, and cream-colored. Growth in glucose-yeast extract broth: A sediment and a slight ring are formed. Dalmau plate culture on corn meal agar: A rudimentary pseudomycelium is formed. Formation of ascospores: Conjugation of haploid cells or bud-parent cell conjugation may precede ascus formation, or asci may arise directly from diploid cells. One to four reniform or bacilliform ascospores are formed. The spores are liberated from the ascus soon after formation and tend to agglutinate. Sporulation occurs after 1 week at 17-25°C on 1% malt extract agar and McClary's acetate agar. Strain UCD-FST 70-3, a subculture of the type, sporulates better than other cultures examined. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+ +

-

+

-

+

-

+

Lactose Raffinose Trehalose Inulin iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

s +

-

+ w/Additional assimilation tests and other g;rov^ characteristics: 2-Keto-D-gluconate Gelatin liquefaction -

Cadaverine s Cycloheximide lOOmg/1 + L-Lysine Amino acid-free + _i EthylamineHCl Growth at 37T 50% Glucose ^A slow, but positive reaction was observed in the type culture. Co-Q: Not determined. Mol% G + C: 35.4-35.7, 2 strains, including CBS 2757 (BD: Fuson et al. 1987).

Origin of the strains studied: CBS 2757 [UCD-FST 70-3], soil, van der Walt and Tscheuschner, NRRL YB4303, NRRL YB-4304, NRRL YB-4305, NRRL YB4306, soil, van der Walt, South Africa. Type strain: CBS 2757, isolated by van der Walt and Tscheuschner from soil. Comments: This species was originally described as

K. lodderi, but, as pointed out by Barnett et al. (1983), and in accordance to Article 73 of the Botanical Code (Greuter et al. 1988), the correct Latin orthography of the epithet lodderae should be used. K. lodderae was recovered from soil, but its true habitat is not known. K. lodderae is phenetically similar in many ways with K. polysporus, but the two are easily distinguished on the basis of ascospore numbers. In addition, unlike K. polysporus, K. lodderae assimilates cadaverine vigorously, albeit slowly. Strain NRRL YB-4306 gave weaker reactions than the type for the assimilation of glycerol, lactic and succinic acids, and growth in the absence of amino acids. The slow assimilation of inulin reported by van der Walt (1970c) could not be confirmed. The utilization of ethylamine as sole nitrogen source, reported as positive by Barnett et al. 1990, was only observed in the type culture, and growth on lysine, reported as variable by these authors, was negative. K. lodderae differs from species of Kluyveromyces that fail to grow on both ethylamine and L-lysine by the utilization of the (3-fructosides sucrose and raffinose, and the ability to grow in the presence of lOOmg/1 cycloheximide. 36.9. Kluyveromyces marxianus (E.G. Hansen) van der Walt (1971) Anamorph: Candida kejyr (Beijerinck) van Uden & H.R. Buckley Synonyms: Saccharomyces marxianus E.C. Hansen (1888b) Zygosaccharomyces marxianus (E.C. Hansen) Guilliermond & Negroni (1929) Zygorenospora marxiana (E.C. Hansen) Krasil'nikov (1954a) Fabospora marxiana (E.C. Hansen) Kudryavtsev (1960) nom. inval. Dekkeromyces marxianus (E.C. Hansen) Novak & Zsolt (1961) nom. inval. Guilliermondella marxiana (E.C. Hansen) Boidin, Abadie, J.L. Jacob & Pignal (1962) Kluyveromyces marxianus (E.C. Hansen) van der Walt (1965c) nom. inval. Kluyveromyces marxianus (E.C. Hansen) var. marxianus (E.C. Hansen) E. Johannsen & van der Walt (Johannsen 1980) Zygofabospora marxiana (E.C. Hansen) Naumov (1987b) Saccharomyces cavernicola Redaelli (1925) Saccharomyces fragilis (Jorgensen) var. bulgaricus Santa Maria (1956b) Kluyveromyces cicerisporus van der Walt, Nel & van Kerken (1966) Kluyveromyces bulgaricus (Santa Maria) van der Walt (1970c) nom. inval. Kluyveromyces bulgaricus (Santa Maria) van der Walt (1971) Kluyveromyces marxianus (E.C. Hansen) van der Walt var. bulgaricus (Santa Maria) E. Johannsen & van der Walt (Johannsen 1980) Kluyveromyces wikenii van der Walt, Nel & van Kerken (1966) Kluyveromyces marxianus (E.C. Hansen) van der Walt var. wikenii (van der Walt, Nel & van Kerken) E. Johannsen & van der Walt (Johannsen 1980) Saccharomyces fragrans Beijerinck (1895) Saccharomyces muciparus Beijerinck (1908) Saccharomyces fragilis Jorgensen (1909) Zygorenospora fragilis (Jorgensen) Krasil'nikov (1954a) Fabospora fragilis (Jorgensen) Kudryavtsev (1960) nom. inval. Dekkeromyces fragilis (Jorgensen) Novak & Zsolt (1961) nom. inval. Guilliermondella fragilis (Jorgensen) Boidin, Abadie, J.L. Jacob & Pignal (1962)

237

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance Dekkeromyces fragilis (Jorgensen) Santa Maria & Sanchez (1970) nom. inval. Kluyveromyces fragilis (Jorgensen) van der Walt (1965c) nom, inval. Kluyveromyces fragilis (Jorgensen) van der Walt (1971) Zygosaccharomyces ashbyi Cordro'ch (1937) nom. inval. Saccharomyces macedoniensis Diddens & Lodder (1939) Fabospora macedoniensis (Diddens & Lodder) Kudryavtsev (1960) nom. inval. Dekkeromyces macedoniensis (Diddens & Lodder) Novak & Zsolt (1961) nom. inval. Saccharomyces chevalieri (Guilliermond) var. atypicus Dietrichson (1954) nom. inval. Hansenula pozolis Herrera, Ulloa & Fuentes (1973) Saccharomyces kefyr Beijerinck (1889b) Mycotorula kefyr (Beijerinck) Harrison (1928) Geotrichoides kefyr (Beijerinck) Langeron & Talice (1932) Torulopsis kefyr (Beijerinck) Lodder (1934) Cryptococcus kefyr (Beijerinck) Skinner (1947a) Candida kefyr (Beijerinck) van Uden & H.R. Buckley (1970) Mycotorula lactis Triiper (1928) Mycotorula lactosa Harrison (1928) Candida pseudotropicalis (Castellani) Basgal var. lactosa (Harrison) Diddens «fe Lodder (1942) Endomyces pseudotropicalis Castellani (1911) Monilia pseudotropicalis (Castellani) Castellani & Chalmers (1913) Atelosaccharomyces pseudotropicalis (Castellani) Froilano de Mello & Gonzaga Femandes (1918) Myceloblastanon pseudotropicalis (Castellani) Ota (1928) Mycocandida pseudotropicalis (Castellani) Ciferri & Redaelli (1935) Castellania pseudotropicalis (Castellani) Dodge (1935) Monilia pseudotropicalis (Castellani) Castellani & Chalmers (Castellani 1937a) Monilia pseudotropicalis (Castellani) Castellani & Chalmers var. metapseudotropicalis Castellani (1937a) Mycotorula pseudotropicalis (Castellani) Redaelli & Ciferri (1947) Candida pseudotropicalis (Castellani) Basgal (1931) Cryptococcus sulphureus Beauverie & Lesieur (1912) Monilia sulphurea (Beauverie & Lesieur) Vuillemin (1931) Torula cremoris Hammer & Cordes (1920) Candida mortifera Redaelli (1925) Mycocandida mortifera (Redaelli) Langeron & Talice (1932) Monilia mortifera (Redaelli) Martin, Jones, Yao & Lee (1937) Candida mortifera (Redaelli) var. a Redaelli (1925) Monilia macedoniensis Castellani & Chalmers (1919) Candida macedoniensis (Castellani & Chalmers) Berkhout (1923) Myceloblastanon macedoniensis (Castellani & Chalmers) Ota (1928) Blastodendrion macedoniensis (Castellani & Chalmers) Langeron & Guerra (1935) Mycotorula macedoniensis (Castellani & Chalmers) Redaelli & Ciferri (Ciferri and Redaelli 1935) Castellania macedoniensis (Castellani & Chalmers) Dodge (1935) Mycotoruloides macedoniensis (Castellani & Chalmers) Dodge & Moore (1936) Monilia macedoniensoides Castellani & Taylor (1925) Castellania macedoniensoides (Castellani & Taylor) Dodge (1935) Cryptococcus kartulisi Castellani (1928) Castellania kartulisi (Castellani) Dodge (1935) Blastodendrion procerum Zach (Wolfram and Zach 1934b) Mycocandida pinoysimilis (Castellani) Redaelli & Ciferri var. citelliana Redaelli & Ciferri (Ciferri and Redaelli 1935) Pseudomycoderma mazzae Dodge (1935)

Growth on YM agar: After 3 days at 25°C, the cells are globose, ellipsoidal, to cylindrical, (2-6)x(3-ll)|im, single, in pairs or in short chains. Growth is butyrous, glossy, cream-colored to brown, rarely pinkish due to pulcherrimin production.

Growth in glucose-yeast extract broth: A sediment and a ring are formed. A thin pellicle may be formed. Dalmau plate culture on corn meal agar: A rudimentary to highly branched pseudomycelium with a few blastospores may be formed. Formation of ascospores: Conjugation of haploid cells or bud-parent cell conjugation may precede ascus formation, or asci may arise directly from diploid cells. One to four ascospores are formed. The spores range in shape from spheroidal to ellipsoidal to reniform. Sporulating cultures appear to be homothallic. The spores are liberated from the ascus soon after formation and tend to agglutinate. Sporulation occurs after 2-5 days at 17-25°C on 1% malt extract agar and McClary's acetate agar. Most strains sporulate well. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s +

-

+ s V

+

-

V

w/V

-

+

-

+

s

V

V

-

Lactose Raffinose Trehalose Inulin

V

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

s

+ s

s

V V

V

-

+ + V

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Gelatin liquefaction Cadaverine + Cycloheximide lOOmg/1 L-Lysine + Amino acid-free EthylamineHCl + Growth at 3 7 T 50% Glucose Co-Q: 6 (Yamada et al. 1976b). Mor/o G + C: 4 1 . 1 ^ 1 . 5 , 12 strains, including CBS 712 (BD: et al. 1987).

+ + +

Fuson

Origin of the strains studied: CBS 712, Schnegg; CBS 2762, type strain of K. bulgaricus, yogurt, Santa Maria; CBS 4857, type strain of K. cicerisporus; CBS 397, type strain of K. fragilis, yogurt; CBS 5671, type strain of K. wikenii, sorghum beer, van der Walt et al. (1966); numerous strains from cheese, Schmidt, France; one strain from prickly pear (Opuntia phaeacantha Engelmann), and one from Drosophila carbonaria Patterson & Wheeler, Arizona, Ganter et al. (1986). Type strain: CBS 712 (neotype), Schnegg.

238

Vb. Descriptions of teleomorphic ascomycetous genera and species

Comments: In the last monograph on Kluyveromyces (van der Walt and Johannsen 1984), the definition of K. marxianus was altered to reflect the ability of certain species to hybridize. Following that view, K. marxianus encompassed several varieties, among which were taxa recognized here as either distinct species (K. dobzhanskii, K. lactis), or synonyms of K. lactis or K. marxianus. The species definition used in the present treatment takes into account hybridization ability in combination with the genetic structure of populations. Because species delineation in K. marxianus has been controversial, these criteria are now given explicitly. The biological species concept is unequivocally applicable to yeasts only when they are heterothallic. The majority of Kluyveromyces species are homothallic and thus facultatively self-fertile. For such yeasts, whether or not populations effectively share a common gene pool depends not only on mating potential, but also on numerous other factors that are difficult to ascertain. However, the end result of evolution can be examined to see whether genes are patterned consistently with a history of phyletic divergence, or whether they exhibit a diffuse genetic clustering indicative of panmixia (random mating). The available information on physiological properties, isoenzyme distributions, ecological affinities, and nuclear genome DNA heteroduplex formation (see Comments on the genus) clearly indicates that K. marxianus is evolutionarily indistinct from taxa once designated by the epithets bulgaricus, cicerisporus, fragilis, or wikenii, and that it has speciated ftiUy from K. dobzhanskii and K. lactis. The distinct nature of K. marxianus and K. lactis has received further substantiation most recently from the work of Steensma et al. (1988), who examined, by electrokaryotyping and phenotype analysis, hybrids of the two species and single spore isolates obtained from the hybrids. The spores had low viability, but more importantly, the few viable spores grew into cultures that were identical, in karyotype or genotype, to either the hybrid or one of the parents. Balanced genetic recombination was not taking place. If K. lactis is rapidly stealing from Saccharomyces cerevisiae its place in the limelight of molecular genetics, K. marxianus is competing for the status of most celebrated domestic microbe. The examples given below should be viewed as a minute sampling of a vast literature. The lactose hydrolysing properties of K. marxianus (and K. lactis) have long been known for their potential in the food industry. Interestingly, Algeri et al. (1978) observed that lactose uptake and P-galactosidase activity in K. marxianus are induced by lactose whereas they are constitutive in K. lactis, based on an examination of one strain of each species. Carvalho-Silva and SpencerMartins (1990) compared several strains of ^ . marxianus and K. lactis on the basis of several features of their lactose uptake, and found that they could be assigned to three different groups that were unfortunately not congruent with their species assignments.

Many publications in the last ten years describe studies of inulin utilization by K. marxianus. Interest in this area stems from the abundance of inulin in certain easily grown crop plants such as the Jerusalem artichoke (Helianthus tuberosus). At the risk of being unjust to all others, a single recent study will be cited in which several key reports are reviewed. Strain CBS 6556, originally described as Hansenula pozolis by Herrera et al. (1973), was found to combine thermotolerance with higher productivity when compared with other inulinase-producing strains of K. lactis (including representatives of former taxon K. vanudenii) and K. marxianus (Rouwenhorst et al. 1988). Inulinase, in that yeast, is bound to the cell envelope, but can be released at higher pH or under reducing conditions. Its synthesis is repressed by glucose or lactose, and reaches a maximum at high temperatures (37^2°C). The extracellular pectinolytic activity of K. marxianus endows it with the potential to be both useful and detrimental to human activity. In the first instance, the endo-polygacturonase of this yeast has been used experimentally to eliminate the pectin haze of apple juice (Gomez-Ruiz et al. 1988). K. marxianus has also been identified as the agent of a soft rot in onion (Johnson et al. 1988). K. marxianus is able to produce glycerol from lactose when grown in whey permeate if the medium is supplemented with 1% Na2S03 (Jeng et al. 1989). The thermotolerance of K. marxianus allows it to be used in very rapid processes of ethanol production, which might compensate for its lower tolerance to ethanol compared to S. cerevisiae. Anderson et al. (1986) obtained 6% ethanol at 43°C in one day with isolates selected from sugar mill effluents. Interestingly, the better isolates keyed to K. marxianus var. marxianus (sensu van der Walt & Johannsen 1984). The type culture of the former K. bulgaricus gave less satisfactory results, and those of K. lactis and K. wickerhamii gave poor results. Bak and Stenderup (1969) demonstrated the existence of a high degree of genetic relatedness between K. fragilis (syn. K. marxianus) and Candida pseudotropicalis, now considered a synonym of Candida kefyr Vaughan-Martini and Martini (1985) confirmed the very high genetic relatedness of these taxa. Yeasts with significant biotechnological interest are particularly difficult to characterize ecologically. The |3-galactosidase activity of K. marxianus is likely to explain its frequent recovery from samples of materials associated with warm-blooded animals, including dairy products. A number of isolates, some of which do not utilize lactose, originate from natural fermentations. The fact that K. marxianus was once represented by five different nomenclatural species reflects the phenetic heterogeneity of the species, and explains why it is difficult to distinguish from other related taxa, especially K. lactis. However, K. marxianus is the only inulin-assimilating Kluyveromyces species that does not assimilate or ferment a-glucoside and grows well at 37°C.

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance

239

36.10. Kluyveromyces phaffii (van der Walt) van der K. yarrowii and others largely by ploidy of the natural isolates. These two characters were considered sufficient Walt (1971) Synonyms: by Naumov (1987b) to propose the reclassification of Fabospora phaffii van der Walt (1963) K. phaffii in a separate genus. However, taking into Kluyveromyces phaffii (van der Walt & Tscheuschner) van der Walt account all the phenetic and genetic data available, it is (1965c) nom. inval. clear that the current classification is satisfactory. Growth on YM agar: After 3 days at 25°C, the cells are Physiologically, lack of ethylamine utilization, abellipsoidal to cylindrical, {2-A) x (3-8) |im, single, in pairs sence of growth on P-fructosides, and assimilation of or in small clusters. Growth is butyrous, glossy to dull, D-gluconate, set K. phaffii apart from other galactoseand cream-colored. utilizing Kluyveromyces species. Growth in glucose-yeast extract broth: A sediment is formed. 36.11. Kluyveromyces polysporus van der Walt Dalmau plate culture on corn meal agar: Short chains (1956a) of cells may be formed. Synonym: Formation of ascospores: Asci arise directly from Saccharomyces polysporus (van der Walt) Campbell (1972) diploid cells. One to four reniform or bacilliform as- Growth on YM agar: After 3 days at 25''C, the cells are cospores are formed. The spores are liberated from the globose to cylindrical, (2-5) x (3-7) [xm, single, in pairs or ascus soon after formation and tend to agglutinate. in short chains. Conjugating cells and large zygotes may Sporulation occurs after 2-5 days at 17-25°C on YM, be present. Growth is butyrous, glossy, cream-colored to malt extract, or McClary's acetate agar. brownish. Fermentation: Growth in glucose-yeast extract broth: A sediment Glucose + Lactose and a thin pellicle are formed. Galactose + Raffinose Sucrose Maltose

-

Trehalose Inulin

-

+ + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

v + -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s -

Dalmau plate culture on corn meal agar: Chains of cells or rudimentary pseudomycelium may be formed. Formation of ascospores: Asci arise from the conjugation of haploid cells. Large numbers of oblong to reniform ascospores are formed (Fig. 105). The spores are liberated from the ascus soon after formation and tend to agglutinate. The type culture forms abundant asci after 1 week at 17-25°C on YM agar. It is difficult to observe mature asci because the ascospores are released easily. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose Inulin

Additional assimilation tests and other growth characteristics: Gelatin liquefaction 2-Keto-D-gluconate Cycloheximide lOOmg/1 Cadaverine Amino acid-free L-Lysine Growth at 37"C EthylamineHCl 50% Glucose Co-Q: Not determined. Mol% G + C: 35.3, CBS 4417 (BD: Fuson et al. 1987).

+

Origin of the strain studied: CBS 4417, soil, van der Walt. Type strain: CBS 4417, isolated by van der Walt from soil. Comments: K. phaffii differs from K. africanus and K. blattae mostly by ascospore numbers and from

Fig. 105. Lysed ascus of K. polysporus, CBS 2163, after 1 week on YM agar. Bar = 5 |im.

Vb. Descriptions of teleomorphic ascomycetous genera and species

240

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+

s

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V

+

-

+ wA ws s Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Cadaverine L-Lysine EthylamineHCl 50% Glucose Co-Q: Not determined. Mol% G + C: 35.3, CBS

-

Gelatin liquefaction Cycloheximide lOOmg/1 Amino acid-free Growth at 3TC

+ w/-

2163 (BD: Fuson et al. 1987).

O r i g i n of t h e strains studied: C B S 2163, soil, South Africa; N R R L Y-2397, N R R L Y-2400, van der Walt. Type strain: C B S 2163, isolated by van der Walt from soil. C o m m e n t s : The type species of Kluyueromyces, K. polysporus is unique among yeasts because of its ability to produce up to 100 ascospores due to supernumerary mitoses in the ascus parent cell (Roberts and van der Walt 1958). Van der W a k (1956a) hypothesized that the multispored state was an evolutionary carry-over from more developed fimgi into the realm of yeasts, but that the vigorously fermentative uninucleate nature of K. polysporus made it a bona fide member of the Endomycetales. The later realization that other yeast species are phenetically close to K. polysporus confirmed the correctness of the assignment. Physiologically, K. polysporus exhibits a particularly high degree of similarity to K. lodderae, but differs from the latter by growth on citric and D-gluconic acids, and failure to grow in the presence of cycloheximide (lOOmg/1). K. polysporus differs from all other ethylamine-negative Kluyueromyces species by the utilization of p-fructosides and absence of growth on 2-keto-D-gluconate. 3 6 . 1 2 . Kluyueromyces thermotolerans Yarrow (1972)

(Filippov)

Synonyms: Zygosaccharomyces thermotolerans Filippov (1932) Saccharomyces thermotolerans (Filippov) Campbell (1972) Zygofabospora thermotolerans (Filippov) Naumov (1987b) Torula dattila Kluyver (1914) (see van der Walt and E. Johannsen 1974) Mycotorula dattila (Kluyver) Harrison (1928)

Torulopsis dattila (Kluyver) Lodder (1934) Cryptococcus dattilus (Kluyver) Skinner (1947a) Candida dattila (Kluyver) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Saccharomyces veronae Lodder & Kreger-van Rij (1952) Kluyueromyces veronae (Lodder & Kreger-van Rij) van der Walt (1970c) nom. inval. Kluyueromyces ueronae (Lodder & Kreger-van Rij) van der Walt (1971) Zygosaccharomyces drosophilae Shehata & Mrak (1952) nom. inval.

G r o w t h o n Y M agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (3-6) x (6-8) (im, single, in pairs or in short clusters. Growth is butyrous, glossy, and cream-colored. G r o w t h in g l u c o s e - y e a s t extract broth: A sediment and a slight ring are formed. Occasionally, growth may be very flocculent. D a l m a u plate culture o n corn m e a l agar: Pseudomycelium may be formed. When present, it ranges from very rudimentary to highly branched with blastospores. F o r m a t i o n of ascospores: Conjugation of haploid cells in the same culture or bud-parent cell conjugation may precede ascus formation, or asci may arise directly from diploid cells. One to four spherical ascospores with conspicuous lipid globules are formed. The spores are liberated from the ascus soon after formation and tend to agglutinate. Sporulation occurs abundantly in most strains after 2 - 5 days at 17-25°C on Y M , malt extract, or McClary's acetate agar. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+ V

+ + V

+ +

-

+

-

V

+ + V

Lactose Raffinose Trehalose Inulin

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ s V

-

s

V

V

-

+ V

+

-

V Additional assimilation tests a n d other g;ro^ characteristics: V 2-Keto-D-gluconate Gelatin liquefaction Cadaverine Cycloheximide lOOmg/1 + L-Lysine + Amino acid-free EthylamineHCl Growth at 37T + 50% Glucose + Co-Q: 6 (Yamada et al. 1976b). Mol% G + C: 46.2, CBS 2803 (BD: Fuson et al. 1987).

+ V

241

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance

Origin of the strains studied: CBS 6340, plum jam, Filippov (1932); CBS 2803, type o^ Kluyveromyces veronae (van der Walt 1971), grapes, Verona; CBS 137, type of Candida dattila; many strains from black knot [Dibotryon morbosum (Schw.) Theissen & Sydow] of sand cherry {Prunus pumila L.) and chokecherry {Prunus uirginiana L.), Drosophila Fallen spp., and insect galls of red oak (Quercus rubra L.), Ontario, Canada; black knot of black cherry (Prunus serotina Ehrh.), Quebec, Canada; fruit of prickly pear (Opuntia L. sp.). Big Pine Key, Florida; fruit of a cereoid cactus. Shroud Cay, Exuma Cays, Bahamas; a drosophilid (Gitona americana Patterson) collected near decaying prickly pear (Opuntia striata Haworth) somatic tissue. Cayman Islands; Drosophila carbonaria Patterson & Wheeler, Arizona (Ganter et al. 1986). Type strain: CBS 6340, isolated by Filippov from fermenting plum jam.

pear tissue in the Cayman Islands. Both strains utilized melibiose, and one strain grew vigorously at 37°C., The utilization of 2-keto-D-gluconate by some strains (including the type) and not by others is unusual, as that compound generally appears to be taxonomically stable. For identification purposes, K thermotolerans can be recognized among species that utilize ethylamine and L-lysine, by its combined lack of growth on (3-glucosides or in the presence of lOOmg/1 cycloheximide.

Comments: Saccharomyces veronae was transferred to Kluyveromyces "provisionally and for purely practical reasons" by van der Walt (1970c). When Yarrow (1972) later studied authentic strains of Zygosaccharomyces thermotolerans and found them to be indistinguishable from K. veronae, he assigned the fused species to Kluyveromyces because he observed ascus deliquescence. This does not alter the fact that K thermotolerans has obvious natural affinities with Saccharomyces and Zygosaccharomyces, a property that is shared with K waltii. They are retained in Kluyveromyces monothetically on the basis of ascus deliquescence. Ascospore ultrastructure in K thermotolerans and K. waltii is similar to that of certain Zygosaccharomyces species and different from that of K marxianus, but equally important differences are observed within the genus Zygosaccharomyces itself (Kreger-van Rij 1979). Phenetically, K thermotolerans is very similar not only to Zygosaccharomyces florentinus and Zygosaccharomyces cidri, but also to Saccharomyces kluyveri. However, an equally high degree of similarity exists between Zygosaccharomyces fermentati and K dobzhanskii, and to a lesser extent between Z fermentati and K lactis or K marxianus. Although it is possible that K thermotolerans may one day return to one of its genera of origin, carrying along with it K waltii, the choice of which genus is not at all obvious. The arguments in favor of transferring them at this time are not at all compelling. Candida dattila was found by van der Walt and Johannsen (1974) to produce ascospores after a suitable heat treatment. They noted the very high phenetic similarity between C dattila and K. thermotolerans, and concluded that the two taxa were synonyms. VaughanMartini and Martini (1985) demonstrated a high degree of DNA reassociation between these taxa. K thermotolerans is associated with fruit, Drosophila species, and possibly other insects that use plants for feeding purposes. Two unusual strains were recovered from drosophilid flies collected near decaying prickly

Growth in glucose-yeast extract broth: A sediment is formed.

36.13. Kluyveromyces waltii K. Kodama (1974) Synonym: Zygofabospora waltii (K. Kodama) Naumov (1986a)

Growth on YM agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (3-6)x(4-10)|im, single, in pairs or in short clusters. Growth is butyrous, glossy, and cream-colored.

Dalmau plate culture on corn meal agar: Pseudomycelium may be formed. When present, it ranges from very rudimentary to highly branched with blastospores. Formation of ascospores: Conjugation of haploid cells in the same culture or bud-parent cell conjugation precedes ascus formation. One to four spherical ascospores with lipid globules are formed. The spores are liberated slowly from the ascus and tend to agglutinate. Sporulation occurs after 2-5 days at 17-25°C on YM, malt extract, or McClary's acetate agar. All strains sporulate moderately well.

Fermentation: Glucose Galactose Sucrose Maltose

+

-

+

-

Lactose Raffinose Trehalose Inulin

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ +

-

+

s

-

+

-

+

s

-

+ +

-

242

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate Cadaverine L-Lysine EthylamineHCl 50% Glucose Co-Q: Not determined. Mol% G + C: 45.7, CBS

+ + + ws

growth

Gelatin liquefaction Cycloheximide lOOmg/1 Amino acid-free Growth at 37°C

+ + w/-

6430 (BD: Fuson et al. 1987).

Origin of the strains studied: CBS 6430 [UCD-FST 72-13], exudate of holly {Ilex L. sp.), Kodama, Japan; several strains were recovered from Drosophila Fallen spp., black knot [Dibotryon morbosum (Schw.) Theissen & Sydow] of chokecherry {Prunus uirginiana L.), and insect galls of red oak (Quercus rubra L.), Ontario, Canada. Type strain: CBS 6430, isolated by Kodama from holly exudate. Comments: As noted for K. thermotolerans, the inclusion of K. waltii in Kluyveromyces is not based on solid evidence of monophyly. K. waltii exhibits greater phenetic resemblance to Zygosaccharomyces mrakii and Zygosaccharomyces microellipsoides than to any Kluyveromyces species. Deliquescence of its asci requires considerably more time compared to other species, including K. thermotolerans. Notwithstanding these considerations, the current classification is retained, because revisions should hinge on compelling evidence which is not currently available. K. waltii is probably insect associated, having been recovered from plant injuries known or suspected to serve as feeding sites for Drosophila species and other insects. K. waltii differs from other ethylamine- and L-lysineassimilating species of Kluyveromyces by the inability to assimilate galactose and the ability to grow in the presence of lOOmg/1 cycloheximide. 36.14. Kluyveromyces wickerhamii (Phaff, M.W. Miller & Shifrine) van der Walt (1971)

Fig. 106. Asci and free ascospores of K. wickerhamii, UW0(PS)91127.2, after 2 weeks on YM agar. Bar = 5 |im.

Formation of ascospores: Conjugation of haploid cells in the same culture may precede ascus formation, or asci may arise directly from diploid cells. One to four reniform to crescentiform ascospores are formed (Fig. 106). The spores are liberated from the ascus soon after formation and tend to agglutinate. Sporulation is abundant for most strains after 2-5 days at 17-25''C on YM, malt extract, or McClary's acetate agar. Fermentation: Glucose Galactose Sucrose Maltose

+ s s -

Lactose Raffinose Trehalose Inulin

-

+ + v + +/w v + v + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/w v ws + v v -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Synonyms: Saccharomyces wickerhamii Phaff, M.W. Miller & Shifrine (1956) Dekkeromyces wickerhamii (Phaff, M.W. Miller & Shifrine) Novak & Additional assimilation tests and other growth characteristics: Zsolt (1961) nom. inval. Guilliermondella wickerhamii (Phaff, M.W. Miller & Shifrine) Boidin, 2-Keto-D-gluconate Gelatin liquefaction Abadie, J.L. Jacob & Pignal (1962) Cadaverine + Cycloheximide lOOmg/1 + Dekkeromyces wickerhamii (Phaff, M.W. Miller & Shifrine) Santa L-Lysine + Amino acid-free + Maria & Sanchez (1970) nom. inval. Ethylamine-HCl + Growth at 37°C v Kluyveromyces wickerhamii (Phaff, M.W. Miller & Shifrine) van der 50% Glucose Walt (1965c) nom. inval. Co-Q: Not determined. Zygofabospora wickerhamii (Phaff, M.W. Miller & Shifrine) Naumov Mol% G + C: 41.9^2.4, 5 strains, including CBS 2745 (BD: Fuson (1986a) et al. 1987).

Growth on YM agar: After 3 days at 2 5 T , the cells are spheroidal to cylindrical, (2-4) x (3-6) jim, single, in pairs or in short clusters. Growth is butyrous, glossy, and cream-colored or pink to brown because of abundant pulcherrimin production. Growth in glucose-yeast extract broth: A sediment and a thin, dull pellicle are formed. Dalmau plate culture on corn meal agar: A rudimentary pseudomycelium is formed.

Origin of the strains studied: CBS 2745 [NRRL Y-8286, UCD-FST 54-210], Drosophila pinicola Sturtevant. Sierra Nevada Mountains, California, Phaff, USA; NRRL Y-5973 [UCD-FST 56-40], slime flux of fir tree {Abies L. sp.), Miller, USA; UWO(PS)85-330.5, exudate of Fremont cottonwood (Populus fremontii Wats.), UWO(PS)85-379.1 and UWO(PS)85-384.1, Drosophila brooksae Pipkin, Ganter et al. (1986); UW0(PS)91-127.2, exudate of red oak {Quercus rubra L.), Ontario, Canada.

1A2,

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance

Type strain: CBS 2745, isolated by Phaff et al. (1956), from Drosophila pinicola. Comments: In nature, K. wickerhamii is confined to Drosophila species and to tree exudates that probably act as Drosophila habitats. Certain K. wickerhamii strains produce broad spectrum killer factors, effective not only against other Kluyveromyces and related species (Lehmann et al. 1987b, Vaughan-Martini and Rosini 1989), but also against a very wide array of unrelated yeasts (M.A. Lachance, unpublished results). K. wickerhamii would easily be confused with other lactose-assimilating species of Kluyveromyces were it not for its inability to assimilate inulin and its resistance to lOOmg/1 cycloheximide. 36.15. Kluyveromyces yarrowii van der Walt, E. Johannsen, Opperman & Halland (1986b) Synonyms: Torulopsis tannotolerans F.H. Jacob (1970) Candida tannotolerans (F.H. Jacob) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Growth on YM agar: After 3 days at 25°C, the cells are spheroidal to ovoid, (3-6) x (4-9) (im, single, in pairs or in short chains. Growth is butyrous, glossy, and creamcolored. Growth in glucose-yeast extract broth: A sediment and a partial ring are formed. Dalmau plate culture on corn meal agar: Pseudomycelium is not formed. Formation of ascospores: Ascus formation follows the conjugation of haploid cells of complementary mating types or asci may arise directly from stable diploid cells. One to four spheroidal ascospores are formed. The spores are liberated from the ascus soon after formation and tend to agglutinate. The diploid strain CBS 8242 sporulates well after 2-5 days at 17-25°C on YM, malt extract, or McClary's acetate agar. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose Inulin

-

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

ws v -

Assimilation:

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Gelatin liquefaction Cadaverine Cycloheximide lOOmg/1 L-Lysine Amino acid-free EthylamineHCl Growth at 37°C 50% Glucose Co-Q: 6 (Y. Yamada in: van der Walt et al. 1986b). Mol% G + C: 34.5 (Stenderup et al. 1972).

+

Origin of the strains studied: CBS 2684, type strain of Candida tannotolerans and CBS 6070, both from tanning liquors containing tree bark, Jacob, France; CBS 8242, a diploid strain. Complementary mating types: CBS 2684 and CBS 6070. Type strain: CBS 8242, a stable diploid obtained by crossing auxotrophic subcultures of CBS 2684 (a) and CBS 6070 {a) (van der Walt et al. 1986b). Comments: Candida tannotolerans was isolated from tanning liquors by Jacob (1970). After Yarrow observed ascospore formation in mixtures of strains of Candida tannotolerans, van der Walt et al. (1986b) described the teleomorph as K yarrowii. This yeast is very similar in DNA base composition and physiological profile to K africanus and K phaffii. Unlike these, however, K yarrowii is heterothallic and forms spherical ascospores. The designation of an artificial diploid strain created from two mutagenenized parents as the type strain of a species may be questionable as a biological practice, but it follows the rules of the International Code of Botanical Nomenclature (Greuter et al. 1988) and must be accepted. This is all the more unfortunate because the diploid construct exhibits a certain amount of hybrid vigor, whereby growth on ethanol, glycerol, xylitol, glucono-6lactone, 10 mg/1 cycloheximide, and YM agar with 40 mM HCl (the last four are not standard tests used in this chapter) was noticeably stronger for the diploid than for either haploid strain. The liquors from which strains of K yarrowii were isolated contained approximately 6% tannins extracted from the bark of various trees (Jacob 1970). Whether or not this is significant in defining the niche of this yeast remains to be seen. The 3 strains examined grew well on yeast nitrogen base agar supplemented with 0.5% tannic acid as the carbon source, which is not particularly unusual. Several other yeasts, including most Kluyveromyces species, grow on that medium. Physiologically, K yarrowii may be distinguished from other ethylamine-negative, four-spored Kluyveromyces species by its absence of growth on |3-fructosides, 2-ketoD-gluconate, D-gluconate, and at 37°C. Comments on the genus The history of the taxonomy of Kluyveromyces is characterized by a series of interesting developments from the creation of the genus, prompted by the discovery

244

Vb. Descriptions of teleomorphic ascomycetous genera and species

of K. polysporus (van der Walt 1956a), to the later inclusion (van der Walt 1965c) of several species at one time considered members of Saccharomyces sensu lato (van der Walt 1970d). The reader is referred to van der Walt's treatment (1970c) for details up to that point. Here, the discussion will emphasize the most recent reassessments of the boundaries of the genus based on phenetic, genetic, or molecular approaches, which are not without a number of fascinating peripeties. To facilitate the discussion, the genus is conveniently divided into three groups each representing species known to exhibit a number of properties in common (see Tables 27 and 28). Group A comprises K. africanus, K. bacillisporus, K. blattae, K. delphensis, K. lodderae, K. phaffii, K. polysporus, and K. yarrowii. Group B is made up of K. aestuarii, K. dobzhanskii, K. lactis, K. marxianus, and K. wickerhamii. Group C comprises K. thermotolerans and K. waltii. Wickerham and Burton (1956a,b) divided species now considered as members of the genus Kluyveromyces with regard to sexual compatibility and ascospore shape, suggesting that they had evolved along two "lines of development". Van der Walt (1970c) extended this idea further, viewing the nutritionally specialized reniform spored species that produce four spores as primitive progenitors from which emerged more advanced species characterized either by the formation of larger ascospore numbers, or the acquisition of p-glucosidase, P-galactosidase or aglucosidase activities. Another line of development, in which ascospores are spheroidal instead of reniform, was presumed to have undergone an analogous nutritional radiation. Ascospore shape was, in those cases, given considerable importance. Kock et al. (1988) reviewed this theme and extended it in the light of published molecular comparisons. In addition to placing much less emphasis on ascospore morphology, they reached the conclusion that ancestral members of the genus were in fact those that produce abundant pseudomycelium, assimilate a wider spectrum of nutrients, produce certain specific fatty acids, and possess diverse ascospore morphologies. Because of the widespread ability of many Kluyveromyces species to be self-fertile (homothallic), a classical concept of biological species based on mating compatibility alone would be difficult to formulate. Hybridization between members of various taxa, including K. dobzhanskii and species now regarded as synonyms of K. marxianus or K. lactis was subjected to diverse interpretations and generated a fair amount of controversy. Wickerham and Burton (1956a,b) obtained interspecific hybrids of these yeasts. Bicknell and Douglas (1970) later showed that hybrids involving K. marxianus (syn. K. fragilis) and K. lactis or K. dobzhanskii were in fact allopolyploids. The potential for limited gene flow was demonstrated (Johannsen 1980) among all taxa later regarded by van der Walt and Johannsen (1984) as varieties of the single species, K. marxianus, as well as with K. wickerhamii. Limited hybridization was also

reported between these and K. waltii or K. thermotolerans. Gene flow between species is not entirely surprising. It serves as a mechanism by which new species may arise, and thus accounts for reticulate evolution. The significance of interspecific hybridization involving K. thermotolerans was examined by Vaughan-Martini et al. (1987), who studied a single-spore isolate previously obtained by massmating ofK. marxianus andK thermotolerans (Johannsen and van der Walt 1978). The putative recombinant was phenotypically and genetically unstable, and could be made to revert to one parental state, that oiK. marxianus. The significance of the results was complicated by the observation that the strain used to construct this hybrid may not have been an authentic representative of K. thermotolerans. Interspecific hybridization was most recently addressed by Steensma et al. (1988) whose results leave no doubt that K. marxianus and K. lactis represent different biological species, in spite of their propensity towards forming sporulating hybrids. One very obvious conclusion is wanting to be drawn regarding mating compatibility in the group B Kluyveromyces species: given that those yeasts have diverged into at least 5 fully distinct species and yet have conserved almost unaltered their sexual compatibility, it follows that the various gene products involved in this mating system must be extremely efficient at performing their function. A last thought on the difficulty of assessing the taxonomic significance of hybridization can be drawn from the following study. Witte et al. (1989) have obtained, by protoplast fusion, hybrids between K. marxianus and Saccharomyces cerevisiae, and between K. thermotolerans and S. cerevisiae. No one would argue that these could be anything but interspecific crosses. Electrokaryotypes of the hybrids demonstrated the presence of hybrid chromosomes, illustrating that once the hurdle of pre-zygotic isolation is sidestepped, speciation does not necessarily provide a complete barrier to gene recombination. While this does not ease our task of identifying species boundaries, it does urge us to exercise caution in interpreting out-of-context data that we deem taxonomically significant. Because all the factors contributing to genetic isolation of yeast populations cannot be assessed in every case, the question of species delimitation is advantageously examined ex post facto, by measuring genetic divergence. The question of species delineation in Kluyveromyces has been addressed extensively by such methods. Nucleic acid reassociations will be considered first. The molecular taxonomy of Kluyveromyces was pioneered by Bicknell and Douglas (1970), who obtained high degrees of heteroduplex formation between the nonrepetitive DNAs of K marxianus and the former taxon K. fragilis, hinting on their conspecificity. K dobzhanskii and K. wickerhamii were found to be genetically distinct from K marxianus and K. lactis, and the last two were recognized as distinct from each other. Based on rRNA-DNA duplex formation, these four taxa were shown, in addition, to have speciated fairly recently. The rRNA relatedness

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance

of K. delphensis or K. thermotolerans to K. lactis was comparable to the relatedness of members of the genera Saccharomyces, Torulaspora, or Zygosaccharomyces to K. lactis. When compared to Saccharomyces cerevisiae, those Kluyveromyces species appeared heterogeneous in their rRNAs, but always distinct from Saccharomyces, Torulaspora, or Zygosaccharomyces. Martini (1973) confirmed that K. marxianus, K. lactis, K. wickerhamii, K. thermotolerans, K. dobzhanskii, and K. delphensis were genetically disjoint as assessed by heterologous DNA renaturation rates. In addition, he compared many pairs of DNAs from every Kluyveromyces species sensu van der Walt (1970c), setting the foundation for our current understanding of genetic relatedness in the genus. Fiol and Poncet (1980) performed DNA reassociations on certain strains. Their reassociation values were not in general agreement with those already in the literature, or with preliminary results to be published later by other workers. Specifically, they found relatively high amounts of reassociation between K. marxianus and K africanus, K phaffii, K dobzhanskii, or K. wickerhamii. A likely interpretation of their findings is that the DNA used as tracer may have been enriched for certain conserved sequences, possibly ribosomal DNA, thus extending the usefixl range of DNA reassociation beyond the usual level of closely related species. The recent DNA reassociation studies of Kluyveromyces by Fuson et al. (1987) and Vaughan-Martini and Martini (1987b) are altogether sufficiently exhaustive to resolve most uncertainties about species boundaries. Lachance et al. (1993) ascertained the species status of K. bacillisporus by DNA reassociation with their putative nearest relatives among group A species. Taken all together, the results of these studies are consistent with the classification presented here. Many authors have contributed to the determination of DNA base composition in Kluyveromyces (Bicknell and Douglas 1970, Nakase and Komagata 1971e, Martini et al. 1972, Poncet and Fiol 1972, Stenderup et al. 1972, Fuson et al. 1987, Vaughan-Martini and Martini 1987b, Lachance et al. 1993). While a broad agreement exists between data from different laboratories, a few exceptions should be noted and taken into account when making comparisons. The values of Poncet and Fiol (1972) tended to be lower than others, except for K polysporus, for which the lowest value (33%) was from Nakase and Komagata (1971e). Because the publication of Fuson et al. (1987) is the most comprehensive and reports data uniformly based on the buoyant density method, only those values have been included in this chapter, with the exception of the value for K bacillisporus. Base composition values are consistent with the separation of the genus Kluyveromyces into three natural groups. Group A species range from 34 to 40, group B species from 40 to 43, and group C species both have 46mol% G + C. Other molecular approaches have focused on patterns of protein or nucleic acid divergence assessed by various indirect methods. Lachance and Phaff (1979) clarified

245

the species boundaries in group B species through an immunological comparison of P-glucanases. They showed that K marxianus, K fragilis, K bulgaricus, K cicerisporus, and K wikenii should be considered synonyms, and that K lactis, K. vanudenii, K. drosophilarum, and K phaseolosporus were also probably conspecific, in spite of their heterogeneity of ascospore morphology. Sidenberg and Lachance (1983, 1986) pursued the question by means of isoenzyme electrophoresis. They confirmed the patterns elicited by DNA reassociation, concluding that introgression, if present among Kluyveromyces species shown to mate at high fi'equencies, had in fact been sufficiently rare to allow them to maintain separate gene pools. K thermotolerans and K waltii were clearly identified as distinct from each other and from group B species. Their ability to undergo some form of rare genetic interaction with other Kluyveromyces species must be considered a vestige of their evolutionary history, and not evidence that they represent "incipient species" (Kock et al. 1988). Restriction endonuclease mapping of the ribosomal DNA clusters of the type strains of Kluyveromyces (Lachance 1989) confirmed the cohesive nature of group B species, all of which shared some synapomorphic restriction sites with other members of the group. Group A species, not surprisingly, were less cohesive, but their respective rDNAs each shared some synapomorphic sites with other members of the group. Our inexperience with the significance of the variation in size and numbers of yeast chromosomes renders difficult the task of evaluating electrokaryography and its application to the systematics of Kluyveromyces. The available data (Kock et al. 1988, Sor and Fukuhara 1989) have usually confirmed the species boundaries proposed here, but have not provided new insight on their interrelatedness. Restriction analysis of mitochondrial DNA (Ragnini and Fukuhara 1988) revealed a great deal of polymorphism among the mitochondrial genomes of Kluyveromyces species. Particularly interesting was the observation that mtDNAs of most group B species contained an unusually high number of Sacll (CCGCGG) and Hpall (CCGG) restriction sites. K marxianus (five strains of K. marxianus sensu stricto and three strains of the synonym K bulgaricus), group C species, and most group A species had few or no such sites. K. aestuarii, K africanus, K delphensis, K lodderae occupied an intermediate position, with many Hpall sites, but few, if any Sacll sites. Again, these data support the distinct status of K. marxianus and K lactis, and the complex inter-relationships linking species in groups A, B, and C. The poor success of numerical taxonomy in recognizing natural groups among yeasts probably derives from our inability to measure many genetically independent phenotypes in them. On the basis of cluster analysis, Campbell (1972) proposed the transfer of all Kluyveromyces species to Saccharomyces (sensu van der Walt 1970d), which has not met with much agreement in the taxonomic community. The physiological profiles of all ascogenous

246

Vb. Descriptions of teleomorphic ascomycetous genera and species

yeasts listed in Barnett et al. (1990) have been analyzed by a similar method (M.A. Lachance, unpublished results) and the analysis has been used here to assess possible relationships and phenetic homogeneity of taxa. Taxa thought to be monophyletic on the basis of genetic or molecular data rarely arranged themselves into phylogenetically consistent patterns. Although intergeneric relationships may not be attainable by such methods, an ordination analysis performed by Poncet (1973b) on Kluyveromyces species gave results that were remarkably consistent with those of molecular studies conducted years after the publication of her paper. She identified the existence of groups A and B, and the distinct nature of K. thermotolerans (group C; K. waltii was not known at that time). Within group B, she correctly recognized the conspecificity of taxa now known to be synonyms of K. marxianus, and their independence from taxa known to be synonyms oi K. lactis. A number of novel properties thought to be potentially usefiil in the taxonomy of the genus Kluyveromyces have been examined. Gorin and Spencer (1970) examined proton magnetic resonance spectra of outer cell wall components. Their analyses properly identified kinships between K. fragilis and K. marxianus, and between K. lactis and K. drosophilarum, but also suggested significant degrees of relatedness between K. thermotolerans and K. delphensis, K. polysporus and K. aestuarii, and could not elicit any particular resemblance between K. phaseolosporus and other synonyms of K. lactis. Also targeting outer wall surface components, Campbell (1972) reported on antigenic characterizations of whole cells. Four antigenic classes were identified. Three antigenic determinants (A, B, and C) had little, if any predictive value with respect to phyletic relatedness. A fourth antigen (D) was unique to three species in group A, namely K. delphensis, K. polysporus and K. lodderae. Fiol and Claisse (1982) studied the spectrophotometric properties of whole cell cytochromes. The low temperature spectra were purported to separate Kluyveromyces groups A and B, and within group B, to elicit K aestuarii and K wickerhamii as distinct from the rest. Furthermore, groups A and B were said probably to constitute a monophyletic entity. Although these conclusions are in general agreement with the views presented here, it is not at all clear how they were arrived at on the basis of the data presented by those authors. Lehmann et al. (1987b) and Vaughan-Martini and Rosini (1989) demonstrated killer activity in some strains of every group B species, and in strains of K lodderae and K phaffii. The toxins are effective against yeasts from other genera as well as species of Kluyveromyces. Reciprocal killing is even possible (Lehmann et al. 1987b). Both studies indicated that killer patterns might be usefiil in biotype identification, but Vaughan-Martini and Rosini (1989) reached the general conclusion that killer patterns had little value in delineating species. Kock et al. (1988) found a correlation between long-chain fatty acid distribution

in Kluyveromyces species and their broad evolutionary affinities as understood by most students of the genus. In particular, group B and C species were found to differ from most group A species by the presence of linoleic and linolenic acids among their long-chain fatty acids. The exception was K. yarrowii, which contains both acids, and K africanus, which contains linoleic acid only. Perhaps inspired by the work of Carvalho-Silva and Spencer-Martins (1990) on the significance of lactose proton symports in K. marxianus and relatives, Kilian and coworkers (1991) surveyed the distribution of symports for five sugars in a strain of every Kluyveromyces species. Evidence that transport patterns are in good agreement with natural affinities is difficult to bring into focus, given that, in terms of symports, K lodderae and K. yarrowii clustered closer to K. marxianus and K. dobzhanskii than to other group A species, and three synonyms of K. lactis clustered closer to group A than to K lactis var. drosophilarum. The most unexpected result was the presence of four symports in K. yarrowii and the absence of symports in K. phaffii, in sharp contrast with the very similar physiologies of these two species. Last, a correlation is claimed between the number of symports and the number of compounds utilized. Carefiil examination of the data (Fig. 2 in Kilian et al. 1991) shows that the postulated trend arose to a large part out of errors made in rearranging the carbon source utilization profiles from a diagram taken from Kock et al. (1988). Naumov (1987b) emended the genus Zygofabospora Kudryavtsev to accommodate certain species of Kluyveromyces, proposing that the latter name should apply only to the multispored species, and that possibly a separate genus should be erected for K. phaffii because of its diplontic life cycle. The rationale for this proposed reorganization (Naumov 1986a) was that the original descriptions of Kluyveromyces and Zygofabospora were clearly distinct, and that many species currently assigned to Kluyveromyces apparently fit the description of Zygofabospora better. When van der Walt (1965c) chose to combine multispored Kluyveromyces species together with others in a single genus, he did so on the basis that ascus deliquescence correlated better than spore number with other characteristics of the species, and thus was a better basis for defining a genus monothetically. By contrast, the two major genera created by Naumov's proposals would be clearly polyphyletic. Indeed, K. lodderae and K delphensis, which are proposed members of Zygofabospora, bear considerably less resemblance to K. marxianus, K. lactis, or other putative ''Zygofabospora " species than to K phaffii or to the multispored, "true" Kluyveromyces species. By many criteria (Poncet 1973b, Kock et al. 1988), Group A species are phenetically homogeneous. The most recently discovered species, K. bacillisporus, is diplontic, like K. phaffii, but also fits well within group A, which serves as additional evidence against splitting group A species. Until the phylogenetic affinities of group C species are clarified, it is not unreasonable

36. Kluyveromyces van der Walt emend, van der Walt / M.A. Lachance

to think that Kluyveromyces, as currently defined, might be monophyletic. Alternatively, group C species might be classified better elsewhere, but evidence of polyphyly in Kluyveromyces is simply lacking, and their transfer at this point would be unjustified. A fortiori, the reassignment of these and other Kluyveromyces species into one monotypic and two polyphyletic genera is to be rejected outright. Morikawa et al. (1985) reported the isolation of a new yeast species capable of fermenting D-xylose to relatively large amounts (3%) of ethanol. The yeast reportedly resembled K. lactis in its assimilation patterns, and was provisionally named K cellobiovorus pending a formal description. Strain CBS 7153 was examined and ascospores were not found. Unlike any Kluyveromyces species, this yeast assimilates A^-acetylD-glucosamine, ethyl acetate, and hexadecane vigorously, utilizes D-glucosamine slowly but strongly, and exhibits very strong and rapid growth in YM agar supplemented with 40 mM hydrochloric acid. Strain CBS 7153 was studied by means of rDNA restriction mapping (Lachance 1989), electrokaryotyping (Sor and Fukuhara 1989), and killer sensitivity patterns (Vaughan-Martini and Rosini 1989). In all cases it was clear that the strain cannot be assigned to the genus Kluyveromyces. In fact. Martini

247

and Vaughan-Martini (1992) showed, by means of DNA reassociation, a high degree of genetic similarity between strain CBS 7153 and the type culture of Candida intermedia, a Q-9 species thought by some so be related to the genus Debaryomyces. Weber et al. (1992) recently described two soil isolates as K piceae, reported to differ from other group A species by the utilization of ethylamine and lysine as nitrogen sources, and galactitol as carbon source. DNA reassociation suggested that these strains represent a distinct species, possibly related to K lodderae. Strains CBS 7738 and CBS 7739 were examined both in this laboratory and at the Centraalbureau voor Schimmelcultures (D. Yarrow, personal communication). Neither strain utilized the three aforementioned compounds. Although the two strains appeared strikingly similar in many ways, the second strain (type) had apparently lost the ability to sporulate or to grow on yeast nitrogen base agar with any simple carbon source (including glucose). Scant growth was observed after supplementing the medium with leucine. In view of this perplexing instability, it appears advisable to defer recognition of this species until these problems are clarified.

248

Vb. Descriptions of teleomorphic ascomycetous genera and species

37. Lipomyces Lodder & Kreger-van Rij M.Th. Smith Diagnosis of the genus Cells are ellipsoidal or globose, reproducing by multilateral budding. Oval to cylindrical giant cells may occur. Pseudomycelium is absent. Cells of most strains are surrounded by a thick mucoid capsule. Most strains form starch-like polysaccharides in this capsule. Cells in older cultures usually include a large fat globule.

e

f

g

h

j

Fig. 107. L. starkeyi, CBS 1807. Various ways of conjugation and of formation of asci (see text) (Slooff 1970a).

Asci develop in various ways; an "active bud" is most frequently involved in formation of the ascus. This may or may not be preceded by a discernable conjugation. (1) When the asci develop from active buds only, they often enlarge to an elongate pear shape (Fig. 107a,c,d). The wall of this type of ascus is thin. Two asci or more may arise from one parent cell (Fig. 107b). The entire ascus may liberate itself from the cell when mature (Fig. 107f). The number of spores may be up to 16 or more per ascus; in some species the number of spores is eight to four or less per ascus. (2) When the ascus is the result of conjugation of an active bud and a protuberance of a cell, the ascus wall is thicker (Fig. 107g, j). Complicated groups of these cell-bud conjugations are frequently present on sporulation media. (3) A parent cell, after having produced an ascus through an active bud, may itself turn into an ascus. Fully grown cells containing ascospores have been observed. These asci possess thick walls. Ascospores are globose, ellipsoidal to oblong-ellipsoidal, generally liberated at maturity. The pigmented walls are of a light amber to brown color. The ascospore wall may be warty, smooth, or it bears ridges running longitudinally on the surface. Germination of ascospores is by swelling to the size of a small cell followed by budding. Conjugation of swollen spores has been observed. Fermentation is absent. Nitrate is not assimilated. Diazonium blue B reaction is negative. Type species Lipomyces starkeyi Lodder & Kreger-van Rij Species accepted \. Lipomyces japonicus van der Wah, M.Th. Smith, Y. Yamada & Nakase (1989) 2. Lipomyces kononenkoae Nieuwdorp, Bos & Slooff (1974) a. Lipomyces kononenkoae Nieuwdorp, Bos & Slooff subspecies^ kononenkoae (1995) b. Lipomyces kononenkoae subspecies spencer-martinsiae van der Walt & M.Th.Smith (1995) 3. Lipomyces lipofer Lodder & Kreger-van Rij ex Slooff (1970) 4. Lipomyces starkeyi Lodder & Kreger-van Rij (1952) 5. Lipomyces tetrasporus Nieuwdorp, Bos & Slooff (1974) Editor's note: In this book the extent of genetic divergence between subspecies and between varieties of a species is considered comparable.

37. Lipomyces Ladder & Kreger-van Rij /M.Th.

Smith

249

Key to species See Table 29. 1. 2(1). 3(2). 4(3). 5(4).

a b a b a b a b a b

Melibiose assimilated -^ 2 Melibiose not assimilated Growth at 40°C positive Growth at 40°C negative -^ 3 Ascospores with ridges in light- and transmission electron microscopy Ascospores without ridges -^ 4 Ascospores warty Ascospores smooth -^ 5 Erythritol and butane-2,3-diol assimilated Erythritol and butane-2,3-diol not assimilated

L. Japonicus: spencer-martinsiae:

249 250

L. tetrasporus:

p. 252

L. starkeyi:

p. 252

L. lipofer: L. kononenkoae ssp. kononenkoae:

p. 251 p. 250

L. kononenkoae ssp.

Table 29 Key characters of species in the genus Lipomyces Assimilation

Species Melibiose Lipomyces

Erythritol

Growth at 40°C

Ascospore wall

Butane 2,3 diol

japonicus

warty

L. kononenkoae ssp. kononenkoae

smooth

L. kononenkoae ssp.

smooth

spencer-martinsiae

L. lipofer

smooth

L. starkeyi

warty

L. tetrasporus

ridges

Systematic discussion of the species 37.1. Lipomyces japonicus van der Walt, M.Th. Smith, Y. Yamada & Nakase (van der Walt et al. 1989c) Synonym: Smithiozyma japonica (van der Walt, M.Th. Smith, Y. Yamada & Nakase) Kock, van der Walt & Y Yamada (1995)

Growth in malt extract: After 3 days at 25°C, cells are globose, 3.5-7.0 [im in diameter, rarely subglobose, ellipsoidal or ovoidal, encapsulated, contain lipid globules, and occur singly or in pairs. Growth is scant. After one month, a sediment and an incomplete ring are formed. Growth on malt agar: After 3 days at 25°C, the cells have the same appearance as observed in malt extract. The streak culture is watery to viscous, creamish-opaque, glistening, and smooth with an entire margin. Dalmau plate culture on corn meal agar: After 10 days at 25°C, neither hyphae nor pseudohyphae are formed. Formation of ascospores: Asci are saccate, (7.013.0x3.0-6.0) [im, persistent, as a rule attached, with 1-4 spores, and arise from the fusion of protuberances of adjacent or non-adjacent cells, or from enlarging protuberances of single cells, or infrequently by automixis. Ascospores are globose, (2.0-3.5) |im, warty, amber or brown when mature, and contain a lipid globule. Actively sporulating cultures turn brown. Sporulation was observed on 2% malt- and V8 agars at 18T, after 7-14 days. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

-

+

-

+

-

+ +

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

+

-

+

-

+ +

V

-

+

-

n

-

Additional assimilation tests and other growth characteristics: Butane 2,3 diol Starch formation 0.1% Cycloheximide

+ + +

Galactonate Growth at 30^0 Growth at 35°C

Co-Q: 9 (van der Walt et al. 1989c). Mol% G + C: 41.5-42.2, CBS 7319, CBS 7549, CBS 7550 (7;^ Smith et al. 1995a).

Origin of the strains studied: CBS 7319 (NRRL Y-17357), garden soil, Kanagawa Prefecture, Japan, IP. van der Walt; CBS 7549, uncultivated soil, Bronkhorstspruit District, Transvaal, South Africa, E.L. Jansen van Rensburg; CBS 7550, uncultivated soil, Frankfort, Orange Free State, South Africa, E.L. Jansen van Rensburg.

250

Vb. Descriptions of teleomorphic ascomycetous genera and species

Type strain: CBS 7319 (NRRL Y-17357), isolated by IP. van der Walt. 37.2. Lipomyces kononenkoae Nieuwdorp, Bos & Slooff (1974) This species has two subspecies: Lipomyces kononenkoae Nieuwdorp, Bos & Slooff ssp. kononenkoae (1995) Lipomyces kononenkoae ssp. spencer-martinsiae van der Walt & M.Th. Smith (Smith et al. 1995a) Growth in malt extract: After 7 days at 25°C, the cells are predominately globose, 5.0-8.5 |im in diameter, or rarely ellipsoidal, (4-5.8x5.5-8.5) |im. The cell walls and contents are faintly refractile, except those of the larger cells. Only a few small oil globules are present. After one month a sediment, a ring, and occasionally a thin, moist pellicle are present. Growth on malt agar: After 7 days at 25T, cells are mostly globose, 4-10 jim in diameter, or rarely ellipsoidal, (4.0-6.0X 6.2-8.0) |im. Some cells produce a single bud. After one month, the streak culture is creamy-white, glistening and mucoid. Dalmau plate culture on corn meal agar: Neither hyphae, nor pseudohyphae are formed. Formation of ascospores: Conjugation of two "active" buds (Slooff 1970a), initiated on one parent cell, frequently precedes the formation of very thin-walled asci. Globose spores are formed and free spores often lie in a cluster in close contact with the parent cell (Fig. 108). Pear-shaped asci also occur, possibly arising from diploidized single buds. Two or more asci may occur on one parent cell. YM agar stimulates the development of protuberances; ftilly grown cells with protuberances may be transformed directly into asci. The usual number of spores per ascus is 8, but varies from 2 to 16.

Fig. 108. L kononenkoae ssp. kononenkoae, CBS 2514 (Phaff and Kurtzman 1984). Globose spores within asci.

Sporulation was observed on corn meal-, 1/10 V8, YM and 1/10 YM agars after 7 days at 25^C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + V + + + + + + V V -

7^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Starch formation Growth at SOT + 0.1% Cycloheximide + Growth at 37T v Galactonate v Growth at 40*'C Co-Q: 9 (Yamada et al. 1986c, Billon-Grand 1987). MoI% G + C: 48.3, CBS 2514 (BD: Phaflfand Holzschu, in Phaflf and Kurtzman 1984); 47.0-48.0, CBS 2514, CBS 7535, CBS 8113, CBS 8114 (r^: Smith etal. 1995a).

Supplementary description of L, kononenkoae ssp. spencer-martinsiae: The subspecies spencer-martinsiae differs from the subspecies kononenkoae by its failure to assimilate D-xylose, galactitol and succinic acid. The assimilation of trehalose and ethanol is variable, and of glycerol is positive. The subspecies is able to grow at 40^C. Origin of the strains of ssp. kononenkoae studied: CBS 2514 (IFO 10375, NRRL Y-11553), soil of citrus orchard, Los Lomas, Trinidad, J.H. Becking; CBS 7535, soil, Magoeba's Kloof, Transvaal, South Africa, J.R van der Walt; CBS 8113, CBS 8114, soil. South Africa, J.R van der Walt. Type strain: CBS 2514, isolated by J.H. Becking. Origin of the strains of ssp. spencer-martinsiae studied: CBS 5608 (ATCC 44833; NRRL Y-11554), soil, Nigeria, E. Drouhet; CBS 7534, soil, Pretoria district, Transvaal, South Africa, J.R van der Walt; CBS 7543, soil, Kwa-Mbonambi State Forest Reserve, Natal, South Africa, J.R van der Walt; CBS 7681, CBS 7682, soil, Bronkhorstspruit District, Transvaal, South Africa, J.R van der Walt. Type strain: CBS 5608, isolated by E. Drouhet. Comments: In a study of species delimitation in the genus Lipomyces by genome comparisons (Smith et al. 1995a), it was shown that strains assigned to L. kononenkoae comprised two genetically discernable

3 7. Lipomyces Ladder & Kreger-uan Rij / M. Th. Smith

251

entities characterized by an average nDNA relatedness of 47%. The heterogeneity of L. kononenkoae was first observed by Hossack and Spencer-Martins (1978) and Spencer-Martins (1983) who noted differences in lipid composition, amylolytic complexes, optimal growth temperature and utilization of |3-cyclodextrin and D-deoxyglucose. Since the two taxa are phenotypically distinguishable. Smith et al. (1995a) proposed to subdivide L. kononenkoae into subspecies. 37.3. Lipomyces lipofer Lodder & Kreger-van Rij ex Slooff (1970a) Synonyms: Torula lipofera den Dooren de Jong (1927) Torulopsis lipofera (den Dooren de Jong) Lodder (1934) Cryptococcus lipoferus (den Dooren de Jong) Skinner (1947b) Waltomyces lipofer (Lodder & Kreger-van Rij ex Slooff) Y. Yamada & Nakase (1985)

Growth in malt extract: After 7 days at 25°C, growth is scant. The cells are granular, sometimes vacuolated, and globose to ellipsoidal, (3.2-8.0x5.0-12.0) |im. Walls and cells are faintly refractile, and sometimes contain a few small lipid globules. A thin ring may be present. After one month, some sediment forms and a few slimy islets may be present. Growth on malt agar: After 7 days at 25°C, the cells are globose to ellipsoidal (4.0-8.0x5.0-14.0) |im, and contain vacuoles and small lipid granules. Large spheroidal cells that contain one large lipid globule may occur. After one month, the streak culture is white to cream-colored, glistening and pasty or mucoid. Dalmau plate cultures on corn meal agar: Neither hyphae nor pseudohyphae are formed. Formation of ascospores: Active buds that are formed on lipid-containing cells become transformed into asci as follows (Fig. 109): (1) An active bud enlarges and the contents turn granular and divide into spores. The number of spores is 4 to 20, but sometimes less than 4. (2) Two active buds on one cell fuse; the fusion product enlarges and develops into an ascus. The number of spores is 3 to 16. (3) Two active buds on separate cells or on neighboring cells copulate; this case is infrequently observed in L. lipofer. (4) An active bud, growing lengthwise, fuses with the conjugation tube of another cell; the two cells joined by a conjugation tube turn into one ascus. In this case the recipient cell frequently contains the greater part of the ascospores: 8-12 per ascus. Ascospores are ellipsoidal and contain an oil droplet. The color is olive-green to light amber. Malachite green is readily taken by the spores. The spore wall is smooth.

Fig. 109. L. lipofer, CBS 944. Asci with ascospores on Starkey's ethanol agar (Slooff 1970a).

Sporulation is observed on corn meal-, V8-, I/IO V8, YM, 1/10 YM agars after one to two weeks. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + V

+ + + + + V V

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+/w V

+ V V

+ + + + +

-

+/w +/w

n s Additional assimilation tests and other growth characteristics: V

Butane 2,3 diol + Galactonate + Starch formation +/w Growth at 30°C v 0.1% Cycloheximide Growth at 35°C Co-Q: 10 (Yamada et al. 1986c, Billon-Grand 1987). Mol% G + C: 49.3, CBS 944 (BD: Phaff and Holzschu, in Phaff and Kurtzman 1984); 46.9^8.5, CBS 944, CBS 2513, CBS 5841, CBS 7603 {T^\ Smith et al. 1995a).

Origin of the strains studied: CBS 944 (ATCC 32031, IFO 1288, NRRL Y-2542), garden soil, Netherlands, L.E. den Dooren de Jong; CBS 2513 (IFO 10378, NRRL Y-11556), soil botanic garden, Leiden, Netherlands, J.H. Becking; CBS 5841 (ATCC 10742, IFO 10379, NRRL Y-1351), A.C. Thaysen; CBS 5842 (ATCC 32371, IFO 10380, NRRL Y-6333), soil, Wales, U.K., D. Jones; CBS 7602, cultivated podzolic soil, Biological Station of Perm University, Russia, LP. Bab'eva; CBS 7603, cultivated meadow soil, Kirghiz, Armenia, LP. Bab'eva.

252

Vb. Descriptions of teleomorphic ascomycetous genera and species

Type strain: CBS 944, isolated by L.E. den Dooren de Jong. Comments: Lipomyces lipofer is the only species in Lipomyces with the coenzyme Q-10 system. On the basis of this chemotaxonomic character, as well as ultrastructural differences in ascospore morphology (Smith and Batenburg-van der Vegte 1984), Yamada and Nakase (1985) transferred this species to the new genus Waltomyces. However, Kurtzman and Liu (1990) showed by molecular studies that W. lipofer and the remaining Lipomyces species are congeneric. 37.4. Lipomyces starkeyi Lodder & Kreger-van Rij (1952) Growth in malt extract: After 7 days at 25°C, growth is scant. Cells are granular and some have vacuoles; lipid globules are scarce and small; cells are globose to ellipsoidal, (4-7x5-1 l)|im. Cell walls and contents are faintly refractile, except in some large globose cells and those cells that contain a single large lipid globule. A thin ring may be present. After one month, there are some small moist islets on the surface. Growth on malt agar: After one week, the cells are similar as in malt extract, except that occasional large round cells with a single large lipid globule occur and the cells are only moderately granulated. After one month, the streak culture is white to light cream-colored, glistening, smooth, and very mucoid. Dalmau plate culture on corn meal agar: Neither hyphae nor pseudohyphae are produced. Formation of ascospores: Active buds developed by lipid-containing cells are transformed into asci by the same four processes as described for L. lipofer. The highest numbers of spores were found in asci derived from one active bud or from the fusion of two active buds (Fig. 107e,h) and may be 16 or more per ascus. The usual number in the type strain was 8 spores, but it may vary from 4-20. Other strains develop 26 spores per ascus, the usual number being 4. Starkeyi's strain number 72, which formerly sporulated with 14 spores per ascus, could no longer be induced to sporulate. In those cases where conjugation between bud and cell was involved, the number of spores did not exceed 8. Ascospores are ellipsoidal and contain an oil drop. The color is light amber to brown. Malachite green readily stains the spores. The spore wall is warty. Sporulation was observed on Starkeyi's ethanol-, corn meal-, V8-, 1/10 V8-, YM-, 1/10 YM agars after two weeks. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n v v v V v v V v v v v v V n s

Additional assimilation tests and other growth characteristics: Butane 2,3 diol v Growth at WC + Starch formation v Growth at BS^'C v 0.1% Cycloheximide + Growth at 40°C Galactonate v Co-Q: 9 (Yamada et al. 1986c, Billon-Grand 1987). Mol% G + C: 48.1, CBS 1807 (BD: Phaff and Holzschu, in PhafiFand Kurtzman 1984); 46.3-48.0, 6 strains, including CBS 1807, CBS 2512, CBS 7545, CBS 8064 {T^: Smith et al. 1995a).

Origin of the strains studied: CBS 1807 (IFO 1289, NRRL Y-1388), soil, USA, R.L. Starkey; CBS 1809 (ATCC 64135, IFO 10382, NRRL Y-11558), dry mutant ex CBS 1807, R.L. Starkey; CBS 2512 (IFO 10383, NRRL Y-11559), soil, Wageningen, Netherlands, H.J. Becking; CBS 6047 (ATCC 64137, NRRL Y-11561), soil, Haren, Netherlands, N.J.W. Kreger-van Rij; CBS 7536, soil, Thornton, Canada, J.R van der Walt; CBS 7537, soil. Botanic garden. Cape Town, South Africa, J.R van der Walt; CBS 7544, CBS 7545, soil. Mount Sheba forest reserve, Transvaal, South Africa, J.R van der Walt; CBS 8064, lemons, France, F. Seigle-Murandi; and 12 strains more, isolated from soil of various locations in South Africa. Type strain: CBS 1807, isolated by R.L. Starkey. 37.5. Lipomyces tetrasporus Nieuwdorp, Bos & Slooff (1974) Synonyms: Zygolipomyces tetrasporus Krasil'nikov, Bab'eva & Meavadh (1967) nom. nud. Zygolipomyces lactosus Krasil'nikov, Bab'eva & Meavadh (1967) nom. nud.

Growth in malt extract: After 7 days at 25°C, the cells are globose to short-ellipsoidal, (4-7 x 4-9) fxm, and occur singly, in pairs or in small clusters. A thin ring may be present. After one month, there is usually a ring and sometimes a mucoid pellicle as well as a small amount of sediment. Growth on malt agar: The cells are similar to those in malt extract. After one month, the streak culture is

3 7. Lipomyces Ladder & Kreger-uan Rij / M. Th. Smith

253

Kurtzman 1984); 47.3-49.1, including CBS 5910, CBS 6051, CBS 6132, CBS 7656 {T^: Smith et al. 1995a).

Fig. 110. L. tetrasporus, CBS 5910. Budding cells and asci with ascospores (Phaff and Kurtzman 1984).

white to light cream-colored, glistening, smooth, and very mucoid. Dalmau plate culture on corn meal agar: Neither hyphae nor pseudohyphae are formed. Formation of ascospores: The ascus develops from "active buds" or, more frequently, from a young cell conjugating by a tube with a bud from another cell. Often, fully grown cells develop ascospores without evident previous conjugation. There are 1-4 spores per ascus (Fig. 110). At maturity, the spores are released from the ascus. Ascospores are amber to brown and have lengthwise ridges. Sporulation was observed on Starkeyi's ethanol-, corn meal-, YM-, 1/10 YM agars after two weeks. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + +

V V V

+ + + + + + + + V

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

V

+ + V

+ + + V V

V

w V

n

s Additional assimilation tests and other growth characteristics: V

Butane 2,3 diol + Galactonate + Starch formation +/w Growth at SS^'C v 0.1% Cycloheximide + Growth at 3TT Co-Q: 9 (Yamada et al. 1986c, Billon-Grand 1987). Mol% G + C: 49.1, CBS 5910 (BD: Phaff and Holzschu, in Phaff and

Origin of the strains studied: CBS 1808 (IFO 10367, NRRL Y-11564), soil, USA, R.L. Starkey; CBS 1810 (IFO 10388, NRRL Y-7038), soil, Ottawa, Canada, Harmsen; CBS 2511 (IFO 10389, NRRL Y-11565), soil, Monaco, J.H. Becking; CBS 5607 (IFO 10390), soil. Reunion, M. Dommerques; CBS 5910 (ATCC 32372, IFO 10391, NRRL Y-11562), soil, USSR, LP. Bab'eva, type strain; CBS 5910.1 (IFO 10392), Schemozom soil, Orenburg district, USSR, I.R Bab'eva; CBS 5911, 6049, 6050, 6051, soil, USSR, LP. Bab'eva; and 9 strains more of soil from various locations. Type strain: CBS 5910, isolated by I.R Bab'eva. Comments on the genus Since the treatment of Phaff and Kurtzman in the last edition of "The Yeasts" (1984), the genus Lipomyces and related genera of the Lipomycetaceae have been the subject of many morphological, biochemical and molecular studies. Morphological examinations concerned the ultrastructure of ascospore walls and septa (Smith and Batenburg-van der Vegte 1984, Smith et al. 1995b). Biochemical studies were related to electrophoretic comparisons of enzymes (Yamazaki and Goto 1985, Yamada and Matsumoto 1988b), coenzyme Q systems (Yamada et al. 1986c, Billon-Grand 1987), carbohydrate profiles of whole-cell hydrolyzates (Weijman and van der Walt 1989), fatty acids and eicosanoids (Botha and Kock 1993, Cottrell et al. 1986, Cottrell and Kock 1989, Lomascola et al. 1994), electrophoretic karyotypes (Cottrell and Kock 1990), ferrichrome production (van der Walt et al. 1990a) and arachidonic acid metabolism (Kock et al. 1992). Molecular studies were focused on mtDNA analyses (Lodolo et al. 1990), ribosomal RNA sequence divergence (Kurtzman and Liu 1990, Yamada and Nogawa 1990b) and genome comparisons (Smith et al. 1995a). The most relevant taxonomic proposals concerned two species. Lipomyces anomalus was transferred to the new genus Babjeuia as B. anomala by Smith et al. (1995b) on the basis of molecular data from Kurtzman and Liu (1990) and Yamada and Nogawa (1990b), as well as because of the ultrastructure of septa and ascospore walls. L. lipofer was transferred to the new genus Waltomyces by Yamada and Nakase (1985) because it is the only species with coenzyme Q-10, a characteristic considered by some investigators to be important on the genus level. However, this transfer is not accepted in this treatment since Kurtzman and Liu (1990) showed Waltomyces and Lipomyces to be congeneric on basis of rRNA sequence divergence. For similar reasons, the proposed transfer of L. japonicus to Smithiozyma by Kock et al. (1995) has not been accepted.

254

Vb. Descriptions of teleomorphic ascomycetous genera and species

38. Lodderomyces van der Walt C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal, ovoidal or elongate. True hyphae are not produced, but pseudohyphae are present. Asci are unconjugated, persistent, and produce one, or rarely two, ellipsoidal to elongate ascospores. Glucose and certain other sugars are fermented. Nitrate is not assimilated. Pellicles are not formed on the surface of liquid media. Coenzyme Q-9 is produced. Diazonium blue B reaction is negative. Type species Lodderomyces elongisporus (Recca & Mrak) van der Walt Species accepted \. Lodderomyces elongisporus (Recca & Mrak) van der Walt (1971) Systematic discussion of the species 38.1. Lodderomyces elongisporus (Recca & Mrak) van der Walt (1971) Synonyms: Saccharomyces elongisporus (as S. elongasporus) Recca & Mrak (1952) Lodderomyces elongisporus (Recca & Mrak) van der Walt (1966a) nom. inval.

Growth on 5% malt extract agar: After 3 days at 25°C, the cells may occasionally be spheroidal but they usually are ellipsoidal to elongate (2.6-6.3) x (4.0-7.4) |im, and occur singly, in pairs, or in small clusters. Growth is butyrous, faintly glistening, and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows abundant well-branched pseudohyphae with blastoconidia. True hyphae are not formed. Aerobic growth is tannishwhite, butyrous, smooth and glistening. Single colonies are low convex with a raised center. A faintly acidic odor is present. Formation of ascospores: Asci are unconjugated, persistent, and transformed from vegetative cells. Each ascus forms one, rarely two, long-ellipsoid shaped ascospores (Fig. 111). Van der Walt (1984b) reported heattreated ascosporogenous cultures to give only colonies that were ascosporogenous. However, it is not certain that this species is homothallic because the ploidy of the ascospores is unknown. Ascospores were observed on V8 agar after 7-10 days at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

+

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + +

-

+

-

+

-

+/w

-

Lactose Raffinose Trehalose

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+

-

+ +

-

+

-

+ + +

-

+/w

-

+ +

-

+

-

^

Q Fig. 111. L. elongisporus, CBS 2605. Unconjugated ascus with an ascospore, after 10 days on V8 agar at 25°C. Bar = 5 ^m.

38. Lodderomyces van der Walt / C.P. Kurtzman

Additional assimilation tests and other characteristics:

growth

2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate + Gelatin liquefaction Saccharate Growth at 2>TC + 10% NaCl/5% glucose + Co-Q: 9, CBS 2605 (Yamada et al. 1977). Mol% G + C: 39.9, 39.5, CBS 2605, CBS 2606 {T^\ Meyer and PhaflF 1969).

Origin of the strains studied: CBS 2605 (NRRL YB4239), type strain of Saccharomyces elongasporus, from concentrated orange juice; CBS 2606 (NRRL YB-4240), soil, South Africa, from J.R van der Walt; CBS 5912 (NRRL Y-7681), from a finger nail, Finland; CBS 6182 (NRRL Y-7682), from baby cream, Netherlands. Type strain: CBS 2605, from concentrated orange juice. Comments on the genus Recca and Mrak (1952) described Saccharomyces elongasporus for a strain isolated from concentrated orange juice. Van der Walt (1966a) pointed out that S. elongasporus was unique among species of Saccharomyces

255

because of its elongated ascospores and capability to assimilate higher paraffins such as decane and hexadecane. Because of these unique properties, van der Walt (1966a) described the genus Lodderomyces for S. elongasporus, and then later revalidated the genus (van der Walt 1971). Because of phenotypic similarities, L. elongisporus had been considered the teleomorph of Candida parapsilosis. Meyer and Phaflf (1972) demonstrated from comparisons of nDNA relatedness that the two taxa are separate species. Nakase et al. (1979) reported that isolates designated C parapsilosis form II represented the anamorph of L. elongisporus, and the isozyme comparisons of Yamazaki and Komagata (1982a) supported this proposal. Hamajima et al. (1987) confirmed from nDNA complementarity that strains of C. parapsilosis form II represent the anamorph of L. elongisporus. Interspecific relationships among members of the Lodderomyces complex have been assessed from comparisons of 18S rRNA/rDNA sequences. Barns et al. (1991) showed a close relationship between C parapsilosis, C. tropicalis, C. viswanathii and C albicans, and James et al. (1994a) reported L. elongisporus to be closely related to C. parapsilosis.

256

Vb. Descriptions of teleomorphic ascomycetous genera and species

39. Metschnikowia Kamienski M.W. Miller and HJ. Phaff Diagnosis of the genus Vegetative reproduction is by multilateral budding. Cells are spheroidal to ellipsoidal, as well as pyriform, cylindroid, or lunate. Pseudomycelium is rudimentary, rarely lacking. Asci are elongate: clavate, sphaeropedunculate or ellipsoidopedunculate. Ascospores are needle-shaped, attenuate at one or both ends, and without a whip-like appendage. One or two spores form per ascus, depending on the species. Some species are parasitic in invertebrates, as well as free-living in aquatic habitats; others are terrestrial, free-living, and often associated with flowers. Sugars are fermented by most species. Nitrate is not assimilated. Ubiquinone system is Co-Q 9. Diazonium blue B reaction is negative. Type species Metschnikowia bicuspidata (Metschnikoff) Kamienski Species accepted 1. Metschnikowia agaves Lachance (1993) 2. Metschnikowia australis (Fell & I.L. Hunter) Mendonga-Hagler, Hagler, Phaff & Tredick (1985) ?^. Metschnikowia bicuspidata (Metschnikoff) Kamienski (1899) a. Metschnikowia bicuspidata (Metschnikoff) Kamienski van bicuspidata (1969) b. Metschnikowia bicuspidata var. californica Pitt & M.W. Miller (1970) c. Metschnikowia bicuspidata var. chathamia Fell & Pitt (1969) 4. Metschnikowia gruessii Gimenez-Jurado (1992) 5. Metschnikowia hawaiiensis Lachance, Starmer & Phaff (1990) 6. Metschnikowia krissii (van Uden & Castelo-Branco) van Uden (1962) 7. Metschnikowia lunata Golubev (1977) 8. Metschnikowia pulcherrima Pitt & M.W. Miller (1968) 9. Metschnikowia reukaufii Pitt & M.W. Miller (1968) 10. Metschnikowia zobellii (van Uden & Castelo-Branco) van Uden (1962) Key to species See Table 30. 1. 2(1).

3(2). 4(1).

5(2). 6(4). 7(4). 8(7).

a Asci formed by differentiation of large, thick-walled refractile chlamydospores -^ 2 b Asci formed from haploid or diploid vegetative cells -^ 4 a Asci formed from spheroidal cells ("pulcherrima" cells), asci sphaeropedunculate; pulcherrimin pigment usually produced ^3 b Asci formed from ellipsoidal to cylindroidal cells ("reukaufii" cells), asci ellipsoidopedunculate to clavate; pulcherrimin pigment not produced —> 5 a Vegetative cells predominantly lunate. Pulcherrimin pigment not produced M. lunata: p. 263 b Vegetative cells globose to ellipsoidal. Pulcherrimin pigment produced by most strains in media with ferric ions M. pulcherrima: p. 264 a Asci clavate, containing a single ascospore, pointed at one end only -^ 6 b Clavate asci arising from diploid cells, each containing two acicular ascospores M. bicuspidata: p. 259 c Clavate asci arising from a zygote of two conjugating haploid cells of opposite mating type; two acicular spores per ascus a b a b a b a b

2-Ketogluconate assimilated 2-Ketogluconate not assimilated Glucose fermented; galactose and glucitol assimilated Glucose not fermented; galactose and glucitol not assimilated Glucose fermented; growth on 50% glucose agar -^ 8 Glucose not fermented; no growth on 50% glucose agar Strong growth at 37''C No growth at 37°C

M. reukaufii: M. gruessii: M zobellii: M. krissii:

p. 265 p. 260 p. 266 p. 262

M. australis: p. 258 M. agaves: p. 257 M. hawaiiensis: p. 261

39. Metschnikowia Kamienski / M.W. Miller and H.J. Phaff

257

Table 30 Key characters of species and varieties in the genus Metschnikowia Species

G3TC^

Assimilation^

FermG^ D-Gluc

a-MG

2-KG

Treh

Glen

+ + +

-

V

+

+ + +

w

-

+

47.0 48.0

+

+

2N

2

marine

47.6

-

+

-

2N

2

aquatic

47.5

-

-

V

+

+ + + + + +

2N IN 2N 2N 2N 2N 2N

2 2

terrestrial terrestrial marine terrestrial terrestrial terrestrial marine

39.2 46.7 45.4 44.2

+

+ + +

M. bicuspidata var. californica

-

+

+

+

+

+

M. bicuspidata var. chathamia

-

+

+

+

+

M. M. M. M. M. M. M.

-

1 +

V

-

+

+

-

-

-

-

+ + + +

+ +

+ + + +

V

-

V

+

G+C terrestrial marine aquatic

+

-

V

Mol%

2 2 2

+

+ w/+

Spores'^ Habitat

IN IN 2N

Metschnikowia agaves M. australis M. bicuspidata var. bicuspidata

gruessii hawaiiensis krissii lunata pulcherrima reukaufii zobellii

Ploidy^

Gal

-

V

+ + +

+

-

-

1

+ + V

-

1 1 or 2 2 2 1

7

45.6 41.3 47.5

^ Abbreviations: G37''C, growth at 37''C; FermG, fermentation of glucose; Gal, D-galactose; D-G1UC, D-glucitol; a-MG, a-methyl-D-glucoside; 2-KG, 2-keto-D-glucoside; Treh, trehalose; Glen, gluconate. ^ Ploidy of vegetative cells. ^ Number of spores per ascus.

Systematic discussion of the species

Assimilation:

39.1. Metschnikowia agaves^ Lachance (1993) Growth in glucose (2%) yeast extract (0.5%) broth: After 3 days at 25°C, the cells are ovoidal to ellipsoidal, occur singly, in parent-bud pairs, or occasionally in short chains and measure (2^) x (3-7) |im. A sediment and a diffuse but thick ring are formed after one month. Growth on 5% malt agar: After 2 weeks at \TC, colonies are small, low convex, glabrous, smooth, white and butyrous to chalky. Dalmau plate cultures on corn meal agar: After 2 weeks, no pseudohyphae or true hyphae are formed.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + +

-

+

-

ws V

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s

-

+

s

-

+ +

-

+ w

-

s +

w Formation of ascospores: After 1 day on Yeast Carbon Base agar (without added nitrogen source), mixed strains of complementary mating types give rise to long (several cell lengths) conjugation tubes, or elongated cells. Additional assimilation tests and other g ro^ Conjugated pairs and zygotes are also present. After characteristics: 3 days at 25°C, mature asci are present, pleomorphic in 2-Keto-D-gluconate w/Starch synthesis Urease shape but usually quasi-cylindrical and conjugated. Two 5-Keto-D-gluconate + Gelatin hydrolysis acicular ascospores, 15-20 |i,m in length, are formed in Cadaverine + L-Lysine Casein hydrolysis one of the two conjugated parent cells forming the ascus Ethylamine + Cycloheximide lO^ig/ml (Fig. 112). In some cases the spores stretch the ascus into 50% Glucose s Acid production a single tubular shape. Ascospores are not liberated at 10% NaCl/5% glucose + Growth at 3 7 T + maturity. Co-Q: Not determined. Mol% G + C: Not determined.

Fermentation: Glucose Galactose Sucrose Maltose

s

-

Lactose Raffinose Trehalose Cellobiose

1 1

Origin of the strains studied: Both type and isotype strains were isolated from basal rots of leaves of blue agave plants {Agave tequilana var. azul), Jalisco, Mexico.

The original spelling of the species name as agaueae has been treated as an orthographic error.

258

Vb. Descriptions of teleomorphic ascomycetous genera and species

Growth in 5% malt extract: After 7 days at 18°C, cells are spheroidal to ovoidal, (3-5) x (6-8) |im, single, in pairs or small groups. After 2 weeks there is a sediment and a light ring, but no pellicle. Growth on 10% malt agar: Cell morphology is similar to that in malt extract. After 2 weeks the streak culture is semi-dull, smooth, white, texture soft, the cross-section is flat and the periphery entire. Dalmau plate culture on corn meal agar: At 18°C pseudomycelium formation is absent or spotty. If present, its development is rudimentary. Formation of ascospores: Following the conjugation of two haploid cells of complementary mating types, a large clavate ascus develops, containing two acicular spores. Asci and spores vary in length from about 25 to 40 |im. Asci do not lyse or discharge the spores at maturity. Sporulation occurs on dilute (2%) malt agar at 12°C after 5-10 days. Fermentation: absent. Assimilation: In YNB media + 2%NaClat 18°C.

Fig. 112. Phase contrast micrographs of M. agaves. One day after mixing compatible strains on Yeast Carbon Base agar (with no added nitrogen), cells with conjugation tubes or elongated cells (a) ftise to form zygotes (b), which after three days give rise to asci (c,d) containing two (d) acicular ascopores. Bar = 5 |im. Courtesy Lachance (1993).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w w/+ + + +

-

1/w

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1

-

+ +

-

+ +

1/w

-

Complementary mating types: CBS 7744, mating type h^ and CBS 7745 (UWO(PS) 92-210.1), mating + + type hr. Type strain: CBS 7744 (UWO(PS) 92-207.1, desig1/w nated as mating type h^. Comments: The characteristics of this species are from Lachance (1993) as the culture was not available for Additional assimilation tests and other growth study. Metschnikowia agaves, like M. hawaiiensis and characteristics: M australis, occurs in nature in the form of separate 2-Keto-D-gluconate Lipase Gelatin hydrolysis haploid mating types. Lachance mixed the mating types 5-Keto-D-gluconate w Casein hydrolysis of M hawaiiensis and of M agaves in all possible Cadaverine + Cycloheximide lO^ig/ml + combinations on Yeast Carbon Base and examined the L-Lysine Ethylamine Cycloheximide lOOfXg/ml + mixtures after 3 and 7 days. He observed intraspecific 50% Glucose Acid production crosses in both species, resulting in abundant asci and 10% NaCl/5% glucose + Growth at 2 5 T + Growth at 2TC spores, whereas the four interspecific crosses showed no Starch synthesis sign of mating activity. He considered this as evidence that Urease M agaves represented a distinct species. M agaves grows Co-Q: 9 (Y. Yamada, personal communication, 1990). Mol% G + C: 47.0, (CBS 5847, mating type a (BD: Mendonga-Hagler well at 37''C in contrast to other haploid Metschnikowia et al. 1985). species and is unable to assimilate glycerol. Origin of the strains studied: CBS 5847, CBS 5848, UCD-FST 68-48, 68-49, 68-50 and 68-51. All strains 39.2. Metschnikowia australis (Fell & I.L. Hunter) were isolated from antarctic seawater and obtained from Mendon^a-Hagler, Phaff & Tredick (1985) J.W. Fell. Synonym: Metschnikowia bicuspidata var. australis Fell & I.L. Hunter (1968) Complementary mating types: CBS 5847 mating

39. Metschnikowia Kamienski / M.W. Miller and H.J. Phaff

259

type a, and CBS 5848 mating type a, both isolated as Dalmau plate culture on corn meal agar: Rudimenhaploid cells. tary pseudomycelium is formed, usually profusely. Type strain: CBS 5847 (NRRL Y-7013), designated Formation of ascospores: Asci arise from vegetative as the holotype. cells and are generally clavate, although less regular Comments: Mendonga-Hagler et al. (1985) investigated shapes are also formed, measuring (3-7)x(15^5)[xm, the DNA relatedness among aquatic members of the sometimes to 60|im, containing two, often appeargenus Metschnikowia. M. bicuspidata var. australis DNA ing as one, acicular ascospores (0.7-1.l)x(l5-50) [xm showed 37-51% relative binding with the DNAs of (Fig. 113). Asci have been observed to discharge the M. bicuspidata var. bicuspidata and of its varieties spores in some strains through the tip. chathamia and californica (Fell and Hunter 1968, Pitt Sporulation occurs after 7-20 days on V8 agar or on and Miller 1970a). On this basis, as well as reduced diluted (1:9) V8 agar at 14-25°C. intervarietal fertility (Pitt and Miller 1970b) and unique Fermentation: habitat in antarctic seawater, Mendonga-Hagler et al. Glucose + Lactose (1985) proposed raising the variety australis to the rank Galactose Raflhnose Sucrose Trehalose of species, which we support. Maltose

Assimilation: 39.3. Metschnikowia bicuspidata (Metschnikoff) Glucose Kamienski (1899) Galactose This species has three varieties: L-Sorbose Metschnikowia bicuspidata (Metschnikoff) Kamienski Sucrose Maltose var. bicuspidata (1969) Synonyms: Monospora bicuspidata Metschnikoff (1884) Monosporella bicuspidata (Metschnikoff) Keilin (1920) Metschnikowiella bicuspidata (Metschnikoff) Kudryavtsev (1960) Metschnikowia kamienskii Spencer, Phaff & Gardner (1964) Metschnikowia wickerhamii Codreanu & Codreanu-Balcescu (1981)

Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+ + v + + + + v V -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ +/w v + + +/w + v

Metschnikowia bicuspidata var. californica Pitt & M.W. Miller (1970a) Metschnikowia bicuspidata var. chathamia Fell & Pitt (1969) Growth in 5% malt extract: After 3 days at 25°C, vegetative cells are mostly ellipsoidal to cylindroidal (38)x(3-13)|im, in some strains globose, 5-8 |im, or elon- Additional assimilation tests and other growth gate, 23-35 ^im, in length. Reproduction is by multilateral characteristics: Urease budding, cells occur singly or are catenulate. After one 2-Keto-D-gluconate + Gelatin hydrolysis month, large refractile globose cells, 7-10 |im, containing 5-Keto-D-gluconate Casein hydrolysis + a lipid globule, may be present. A ring and abundant Cadaverine Cycloheximide 1 |ig/ml w/L-Lysine + sediment are formed, a pellicle is absent. Acid production Ethylamine + Growth at 3 0 T v Growth on 10% malt agar: After one month at 25°C, 50% Glucose Growth at 37"C the growth is cream-colored, the surface is smooth, or in 12.5% NaCl/5% glucose + Starch synthesis occasional strains rugose, the edge entire or crenulate. Co-Q: 9 (Yamada et al. 1977). Mol% G + C: 48.0, CBS 5575 (BD: Mendonga-Hagler et al. 1985).

Fig. 113. M. bicuspidata var. bicuspidata, CBS 5575. Asci formed on V8 agar after 8 days at 2 5 ^ . Bar= 10 |im.

Supplementary description of M. bicuspidata var. californica: The variety californica assimilates a-methylD-glucoside well, shows strong growth in the presence of 1 (jig/ml cycloheximide and weak growth with 10|ig/ml. These differences allow it to be separated from the variety bicuspidata using standard growth tests. Mol% G + C: 47.6, CBS 6010 (BD: Mendonga-Hagler et al. 1985). DNA complementarity between the variety californica and the type strain of the variety bicuspidata was reported to be 86% (Mendonga-Hagler et al. 1985). The habitat of the two varieties differs. All strains of the variety californica came from sea water or kelp off the coast

260

Vb. Descriptions of teleomorphic ascomycetous genera and species

of southern and central California, while most strains of the variety bicuspidata originated in salt lakes, often associated with diseased brine shrimp, and sometimes in fresh water lakes, possibly associated with Daphnia magna or with trematode sporocysts. Supplementary description of M, bicuspidata van chathamia: The variety chathamia assimilates a-methylD-glucoside well, but does not assimilate D-gluconate and 2-keto-D-gluconate. These differences allow it to be separated from the variety bicuspidata using standard growth tests. In addition, some strains grow weakly or latently on ribitol. Growth in the presence of 1 ^g/ml cycloheximide is good, but absent with 10(ig/ml. Maximum growth temperature is 30°C. DNA complementarity between the variety chathamii and the type strain of the variety bicuspidata was reported to be 81%. Mol% G + C: 47.5 (BD: Mendonga-Hagler et al. 1985). Origin of the strains belonging to the variety bicuspidata: Sporocysts of Diplostomumflexicaudum (5); brine shrimp {Artemia salina) (13); Castolia odorata from a lake in Wisconsin (1). Complementary mating types: CBS 5902 (a) and CBS 5903 (a). Type strain: CBS 5575, selected as neotype by L.J. Wickerham, who first isolated it in culture from sporocysts of the parasitic strigeid trematode Diplostomum ftexicaudum inhabiting the digestive gland of the snail Stagnicola emarginata angulata in a fresh water lake in Michigan. Origin of the strains belonging to the variety californica: Sea water or kelp off the coast of California from San Diego to Point Reyes in central California (23). Type strain: CBS 6010 (UCD-FST 67-100) isolated by Phaff from Pacific ocean water near Point Reyes, California. Origin of the strains belonging to the variety chathamia: Fresh water ponds on Chatham Island, New Zealand (3). Type strain: CBS 5980 (IMS 23-414, UCD-FST 672) isolated by Fell from a fresh water pond near the ocean on Chatham Island. Comments: Retaining the three varieties of M bicuspidata (Table 30) was based on differences in metabolic profiles, biogeography and habitat. The varieties show interfertility (Pitt and Miller 1970a) and DNA relatedness values ranging from 81 to 86% compared with the variety bicuspidata (Mendonga-Hagler et al. 1985). The former variety australis (Fell and Hunter 1968) was elevated to the rank of species by Mendonga-Hagler et al. (1985). Strains of the three varieties comprising the species M bicuspidata are morphologically and physiologically quite similar, and related by their fresh water or marine habitat, ascus shape, number of ascospores and interfertility between mating types. The variety bicuspidata

is generally homothallic although heterothallic haploids have been obtained (Wickerham 1964a), apparently by a parasexual mechanism as described by Pitt and Miller (1970b). These haploids are capable of hybridizing with the other heterothallic varieties and producing sparsely sporulating hybrids. Some strains of the variety bicuspidata, i.e., those designated as M. kamienskii, in general had slightly lower maximum temperatures for growth (27-28°C) than the strains obtained from sporocysts which generally grew at 30-34°C. The nine strains of the variety bicuspidata which we isolated from diseased Artemia salina taken from salt ponds (ca. 10% NaCl) in southern California (Lachance et al. 1976), initially did not grow in the usual assimilation media unless they were supplemented with 2% NaCl. Asci of these strains have been observed to discharge their spores from the tip of the peduncle, occasionally quite forcefully. The ecological implication and the possibility of active mechanical predation for the variety bicuspidata have been discussed by Lachance et al. (1976), who misidentified these strains as M. bicuspidata var. australis. 39.4. Metschnikowia gruessii Gimenez-Jurado (1992) Synonyms: Anthomyces reukaufii Griiss (1918) Nectaromyces reukaufii (Gruss) H. Sydow & P. Sydow (1918) Nectaromyces cruceatus Schoellhorn (1919)

Growth in glucose (2%)-yeast extract (0.5%)peptone (1%) broth: After 3 days at 25°C, the cells are variable in shape and size, ovoidal, ellipsoidal, sometimes cylindrical and measure (2.5-6.3)x(8.8-27.5) (im. Cells are usually in pairs or in groups of four giving rise to characteristic "airplane" or trident configurations. After one week, refractile, ovoidal chlamydospores, (5.012.5)x(10.0-15.0)|jim, with one or more lipid globules are present. No ring or pellicle is formed. Growth on glucose (2%)-yeast extract (0.5%)peptone (1%) agar: After one week at 25''C, most strains form colonies which are cream-colored, smooth, often papillate and glistening. Colony shape is slightly raised and convex with an entire margin. Texture is butyrous. Dalmau plate cultures on corn meal agar: After 7 days at 25''C, growth under the coverslip consists of short chains of stalagmoid cells with ovoid blastoconidia. Chlamydospores and "airplane" configurations are also present. Formation of ascospores: Asci may originate from cells and from chlamydospores which elongate at one end to a peduncle. The ellipsoidopedunculate asci measure (6.37.5) X (31.3-60.0) (im and contain 2 acicular to acerose ascospores that are pointed at one end, often appearing biftircate, and are not released from the ascus at maturity. Sporulation occurs after one week on dilute (1:14) V8 agar at \TC.

39. Metschnikowia Kamienski / M.W. Miller and H.J. Phaff

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Lactose Raffinose Trehalose

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ w + w + v w -

Additional assimilation tests and other growth characteristics: Urease 2-Keto-D-gluconate Gelatin hydrolysis 5-Keto-D-gluconate Casein hydrolysis Cadaverine + Cycloheximide 1 |ig/ml L-Lysine + Acid production Ethylamine + Growth at 3 r C 50% Glucose Growth at 37°C 12.5% NaCl/5% glucose + Starch synthesis Co-Q: 9 (79%), Q-8 (9.2%) (Gimenez-Jurado 1992). Mol% G + C: 39.2, CBS 7657 {T^\ Gimenez-Jurado 1992).

Origin of the strain studied: Only the type strain was available to us for study and most of the characteristics given are based on the publication by Gimenez-Jurado (1992). Type strain: CBS 7657 (IGC 4382) isolated from the nectaries of Hebe salicifolia, Oeiras, Portugal.

261

M. reukaufii, and of several additional strains, GimenezJurado was able to separate M. gruessii phenotypically by the lack of assimilation of trehalose versus strong growth by M. reukaufii and the formation of airplane or trident configurations in a 20% honey solution. Additionally, we found in our review that M gruessii does not grow on 2-keto-D-gluconate, whereas M reukaufii shows good growth on this compound. Gimenez-Jurado (1992) also noted that M. gruessii and M reukaufii frequently occur side by side in various flower species, but that the latter is far more common. Included in Gimenez-Jurado's study was an authentic strain, labeled Nectaromyces reukaufii (IGC 3275), that had been studied by Gruss (1918) and various later investigators, who considered it as a synonym of Candida reukaufii or an anamorph of M. reukaufii. This strain shared 97% of its base sequences with M. gruessii, evidencing synonymy with that species. We also have listed Anthomyces reukaufii as a synonym of M gruessii, as this was the name originally given by Griiss to the strain that was later renamed Nectaromyces reukaufii by H. Sydow and P. Sydow (1918) because Anthomyces was a later homonym and thus illegitimate. Nectaromyces cruciatus is also assumed to be a synonym of M gruessii because Schoellhom (1919), who also studied the isolate of Griiss, described it as Nectaromyces cruciatus, apparently unaware of the other publications on this yeast cited above. 39.5. Metschnikowia hawaiiensis Lachance, Starmer & Phaff (1990) Growth in 5% malt extract: After 3 days at 25°C, the haploid cells are short ovoidal to ellipsoidal, occur singly, in pairs or as cells with several buds, and measure (24) X (4-6) |im. A sediment is formed after 2 to 3 weeks. Growth on 10% malt extract agar: After 2 weeks at 17°C, colonies are large, low convex to umbonate, glabrous, smooth, white, and butyrous. Some cells develop long tubular outgrowths instead of buds. Dalmau plate cultures on corn meal agar: Branching true hyphae with rare, phase-dark septa are formed after 2 weeks. Formation of ascospores: As early as 6 hours after mixing of complementary mating types on 1% malt extract agar, conjugation tubes appear on some cells. After 8 hours conjugated pairs and zygotes are present, some with wide, tubular outgrowths. After 1 day, tubular, conical asci, some exceeding 200 |im in length, may be formed (Fig. 114). Most asci retain signs of the original conjugating pair of parental cells. Two large acicular ascospores (140-180 |im long) are produced per mature ascus (Fig. 115). The spores are not released from the ascus at maturity.

Comments: Henriques et al. (1991) developed a ribosomal DNA spacer probe specific for the type strain of M reukaufii. While the probe did not hybridize with other species oi Metschnikowia, they noted that one strain identified as M reukaufii also did not hybridize with the probe. DNA-DNA hybridization between M reukaufii and the atypical strain revealed only 10% DNA complementarity. In addition, the G + C content of the DNA of the atypical strain was found to be approximately 4mol% lower than that of the type strain of M reukaufii, virtually precluding conspecificity (Kurtzman and Phaff 1987). Henriques et al. (1991) concluded that the non-reacting strain represented a species different from M reukaufii. A detailed description of this strain as a new species of Fermentation: the genus Metschnikowia, M. gruessii, was subsequently Glucose Galactose pubHshed by Gimenez-Jurado (1992). Besides low DNA Sucrose reassociation values between the DNAs of M gruessii. Maltose

+

-

Lactose Raffinose Trehalose

Vb. Descriptions of teleomorphic ascomycetous genera and species

262

Fig.

114.

on YM

M. hawaiiensis,

CBS

7432zCBS

7433.

a g a r a f t e r 1 day. N o t e t h e c o n j u g a t e d

Asci

are f o r m e d

parental cells (arrow).

Fig.

115.

M. hawaiiensis,

CBS

7432×CBS

7433. Pair of ascospores

released from an ascus after treatment with yeast lytic enzyme

(ICN

B a r = 4 0 ~tm.

B i o c h e m i c a l s ) . B a r = 4 0 ~tm.

Assimilation"

39.6. Metschnikowia krissii (van Uden & CasteloBranco) van Uden (1962)

Glucose

+

N-Acetyl-D-glucosamine

+

Synonym:

Galactose

+

Methanol

-

Metschnikowiella krissii

L-Sorbose

+

Ethanol

+

Growth in 5% malt extract: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (4.5-6) × (6-11) ~tm; elongate cells, (4.5-6)×(11-13)~tm, also occur. A thin ring may be formed.

Sucrose

+

Glycerol

+

Maltose

+

Erythritol

-

Cellobiose

+

Ribitol

w

Trehalose

+

Galactitol

-

Lactose

-

D-Mannitol

+

Melibiose

-

D-Glucitol

+

Raffinose

-

c~-Methyl-D-glucoside

-

Melezitose

+

Salicin

+

Inulin

-

D-Gluconate

ws

Soluble starch

-

DL-Lactate

-

D-Xylose

+

Succinate

+

I~-Arabinose

-

Citrate

+

D-Arabinose

-

Inositol

-

D-Ribose

-

Hexadecane

+/w

L-Rhamnose

-

Nitrate

-

D-Glucosamine

v

Vitamin-free

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate

+

Lipase

w

5-Keto-D-gluconate

-

Gelatin hydrolysis

-

Cadaverine

+

Casein hydrolysis

-

L-Lysine

+

Cycloheximide

1 p~g/ml

+

Ethylamine

+

Cycloheximide

10 ~tg/ml

-

50% Glucose

+

Acid production

w/-

12.5% NaC1/5% glucose

+/s

G r o w t h at 3 0 ° C

+

Starch synthesis

-

G r o w t h at 3 7 ° C

-

Urease Co-Q: Not determined. Mol%

G+C:

46.6-46.7,

two strains, CBS 7432 (type) and CBS 7433

( i s o t y p e ) ( B D : L a c h a n c e et al. 1 9 9 0 ) .

Origin of the strains studied" Morning glory flowers (Ipomoea acuminata) on the island of Hawaii (5); Scaptomyza calliginosa (7) and Drosophilafloricola (1), both of which breed in morning glory flowers on the island of Hawaii. Complementary mating types: CBS 7432 and CBS 7433. Type strain: CBS 7432, isolated from a morning glory flower, island of Hawaii.

van Uden & Castelo-Branco (1961)

Growth on 10% malt agar: After one month at 25°C, the streak culture is yellowish, semidull, soft, and delicately punctulate to smooth. Dalmau plate culture on corn meal agar: A rudimentary pseudomycelium is formed. Formation of ascospores: Asci arise from diploid vegetative cells and are generally clavate, 18-26 ~tm long, and contain a single, needle-shaped ascospore, which is pointed at one end and nearly as long as the respective ascus. Asci were observed on V8 agar after 10-14 days at 16°C. Fermentation: absent. Assimilation: Glucose

+

N-Acetyl-D-glucosamine

-

Galactose

-

Methanol

-

L-Sorbose

-

Ethanol

w

Sucrose

+

Glycerol

+

Maltose

+

Erythritol

-

Cellobiose

+

Ribitol

-

Trehalose

+

Galactitol

-

Lactose

-

D-Mannitol

+

Melibiose

-

D-Glucitol

-

Raffinose

-

a-Methyl-D-glucoside

+

Melezitose

+

Salicin

+

Inulin

-

D-Gluconate

-

Soluble starch

-

DL-Lactate

-

D-Xylose

-

Succinate

+

L-Arabinose

-

Citrate

-

D-Arabinose

-

Inositol

-

D-Ribose

-

Hexadecane

-

L-Rhamnose

-

Nitrate

-

o-Glucosamine

-

Vitamin-free

-

39. Metschnikowia Kamienski / M.W. Miller and H.J. Phaff

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Cadaverine L-Lysine Ethylamine 50% Glucose 12.5% NaCl/5% glucose Starch synthesis

+ + + + -

Urease Gelatin hydrolysis Casein hydrolysis Cycloheximide 1 |jig/ml Acid production Growth at SOT Growth at 37°C

+

Co-Q: 9 (Yamada et al. 1977). Mol% G + C: 45.4, CBS 4823 (BD: Mendon^a-Hagler et al. 1985).

Origin of the strains studied: Sea water off the southern California coast (4). Type strain: CBS 4823, isolated by van Uden and Castelo-Branco (1961) from sea water off La Jolla, California. 39.7. Metschnikowia lunata Golubev (1977) Synonyms: Schizoblastosporion kobayashii Soneda & Uchida (1971) Selenotila intestinalis Krasil'nikov (1927) Selenozyma intestinalis (Krasil'nikov) Yarrow (von Arx et al. 1977)

Growth in 5% malt extract: After 3 days at 25°C, the cells are lunate, (2-4) x (5-8) |im, or rarely ovoidal, (2.5-5)X(3.5-8) |im, and single or in pairs (Fig. 116). A slight sediment is formed. After one month at 20*^C, a sediment and ring are present. Pulcherrima cells, (810.5)x(8-12)|im, are present and may have two small, pointed protrusions. Growth on 10% malt agar: After one month the streak culture is cream-colored, mat, with a smooth surface, pasty, slightly convex with an entire border. Pulcherrimin is not produced. Dalmau plate culture on corn meal agar: A rudimentary pseudomycelium is formed.

263

are cylindrical and measure (2^)x(13^0)|im. Asci contain one to two acicular ascospores (Fig. 117). Asci are produced on dilute (1:9) V8 agar at 15°C after 10 days. Fermentation:

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + w/-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Cadaverine L-Lysine Ethylamine 50% Glucose 12.5% NaCl/5% glucose Starch synthesis

+ + + + w/+ -

Urease Gelatin hydrolysis Casein hydrolysis Cycloheximide 1 ^ig/ml Cycloheximide lOfXg/ml Acid production Growth at SO'^C Growth at 3 7 T

+ +

Formation of ascospores: Asci arise from spheroidal chlamydospores, which generally contain a single, prominent lipid globule. The lipid globule is no longer present in the ascus. Asci are ellipsoidopedunculate; the ellipsoidal part measures (7-10)x(7-12)|a.m, whereas the peduncles

Co-Q: 9 (Y. Yamada, personal communication, 1990). Mol% G + C: 44.2, CBS 5946 (BD: Mendonga-Hagler et al. 1985).

Fig. 116. M. lunata, CBS 5946. Lunate vegetative cells grown in malt extract for 4 days. Bar= lOjim.

Fig. 117. M lunata, CBS 5946. Ascus formed on V8 agar at 15''C. Bar=10fxm.

Origin of the strains studied: CBS 5946 from a flower of Vicia cracca L., Russia; CBS 6798 (type of Schizoblastosporion kobayashii), from exudate of

264

Vb. Descriptions of teleomorphic ascomycetous genera and species

Casuarina sp., Japan. This strain produced asci but no ascospores were observed. Type strain: CBS 5946 ex flower, Russia. 39.8. Metschnikowia pulcherrima Pitt & M.W. Miller (1968) Anamorph: Candida pulcherrima (Lindner) Windisch Synonyms: Torula pulcherrima Lindner (1901) Torulopsis pulcherrima (Lindner) Saccardo (1906) Saccharomyces pulcherrimus (Lindner) Beijerinck (1912) Eutorula pulcherrima (Lindner) Will (1916) Rhodotorula pulcherrima (Lindner) Harrison (1928) Candida pulcherrima (Lindner) Windisch (1940) Chlamydozyma pulcherrima Wickerham (1964a) Fig. 119. M pulcherrima, CBS 5833. Ascus with distinctly separated ITorulopsis rosea Berlese (1895) ascospores formed on dilute, filtered V8 agar incubated for 2 weeks at Torula rubefaciens Grosbiisch (1915) 15T. Bar = 5!im. Monilia castellanii Re (1925) Cryptococcus interdigitalis Pollacci & Nannizzi (1926) Torulopsis interdigitalis (Pollacci & Nannizzi) Krasil'nikov (1954c) Dalmau plate culture on corn meal agar: Aerobically, Cryptococcus castellanii (Re) Castellani (1928) Torulopsis castellanii (Re) Castellani & Jacono (1933) pseudomycelium is not produced; anaerobically, rudimenCastellania castellanii (Re) Dodge (1935) tary pseudomycelium is formed, often profusely. Torulopsis pulcherrima (Lindner) Saccardo var. variabilis Lodder (1934) Formation of ascospores: Asci arise from spheroidal Torulopsis pulcherrima (Lindner) Saccardo var. rubra Castelli (1940) chlamydospores, with one or more prominent lipid Asporomyces uvae Mrak & McClung (1940) Torulopsis dattila (Kluyver) Lodder var. rohrbachense von Szilvinyi & globules (Fig. 118). The lipid globules disappear during ascus development. Asci are sphaeropedunculate, Kaulich (1948) Torulopsis burgeffiana Benda (1962) (4-ll)x(15-55)jim, usually (6-8)x(20^2)|im, pedun-

Growth in 5% malt extract: After 3 days at 25°C, vegetative cells are globose to ellipsoidal, (2.5-6) x (410) jim, usually (2.5-5) x (4-7) ^im, single, reproducing by multilateral budding. Chlamydospores (pulcherrima cells) are not present. After one month at 25''C, pulcherrima cells are usually present, highly refractile, globose, (4)x(7-ll)!im, or subglobose, containing a single lipid globule, occasionally more than one (Fig. 118); a thin ring and abundant sediment are present, a pellicle is absent.

cles are cylindrical, (1.0-2.5)x(10^5)[xm, usually (1.52)x(15-30)|im, containing two, sometimes one, acicular to fiUform ascospores, (0.4-1.5) x (9-27) [xm (Fig. 119). In some strains, asci were observed to lyse at the peduncle extremity. Asci are formed on dilute, filtered V8 juice agar, and other dilute media (1:9; 1:29), after incubation for 5-21 days at 12-2rC (Pitt and Miller 1968).

Growth on 10% malt agar: After one month at 25°C, growth is cream-colored, or if pulcherrimin pigment is produced, reddish-brown (sometimes in sectors). The surface is smooth and glistening, in some strains sparsely papillate, edge entire. Pulcherrimin pigment usually diffuses into the medium.

Glucose Galactose Sucrose Maltose

Fig. 118. M. pulcherrima, CBS 5833. Vegetative and pulcherrima cells on malt agar after 6 days. Bar= 10 jim.

Fermentation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w/-

+ + + + + + +

-

+

-

+

-

w/-

-

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

V

-

+ + + + + w/+ V

-

+

-

39. Metschnikowia Kamienski / M.W. Miller and H.J. Phaff

265

Additional assimilation tests and other growth characteristics:

39.9. Metschnikowia reukaufii Pitt & M.W. Miller (1968)

+ Urease 2-Keto-D-gluconate Gelatin hydrolysis 5-Keto-D-gluconate + Casein hydrolysis Cadaverine + Cycloheximide 10|ig/ml + L-Lysine + Cycloheximide 100|ig/ml Ethylamine + Acid production 50% Glucose Growth at SO^C + 12.5% NaCl/5% glucose w + Growth at 2>TC v 10% NaCl/5% glucose Starch synthesis Co-Q: 9 (Yamada and Kondo 1972b). Mol% G + C: 45.6, CBS 5833 (BD: Mendonga-Hagler et al. 1985).

Anamorph: Candida reukaufii (Griiss) Diddens & Lodder Synonyms: Candida reukaufii (Griiss) Diddens & Lodder (1942) Chlamydozyma reukaufii Wickerham (1964a) Chlamydozyma zygota Wickerham (1964a) Metschnikowia zygota Fell & I.L. Hunter (1968) 1 Candida rancensis C. Ramirez & A. Gonzalez (1984h)

Origin of the strains studied: Flowers from N.W. Canada (9); flowers and spoiled fruit in California (11); Drosophila spp. (4); from exudates of buckeye (Aesculus), birch (Betula), and willow (Salix) spp. in Japan and the U.S. Pacific Northwest (4). Type strain: CBS 5833, isolated by Mrak and McClung (1940) from grapes. Comments: As is evident from the number of synonyms of M. pulcherrima, a number of yeasts or yeastlike isolates were not recognized initially as members of that species or its anamorph. For example, Castellani (1925) isolated several yeast strains from diseased tissues of human patients which he referred to as Monilia sp. or Cryptococcus sp. Re (1925) subsequently described these isolates as Monilia castellanii or Cryptococcus castellanii to provide tentative binomials for the isolates. Castellani (1928) referred to the isolates as Cryptococcus castellanii but he and Jacono (1933) changed the name to Torulopsis castellanii Finally, Langeron and Guerra (1941) recognized that these strains were representatives of Torulopsis pulcherrima, because they produced a characteristic maroon pigment on media supplemented with ferric ions and produced large lipid-containing chlamydospores. Langeron and Guerra (1941) also reidentified a species named Cryptococcus interdigitalis by Pollacci and Nannizzi (1926) as a strain of Torulopsis pulcherrima. Lodder (1934) had previously considered Cryptococcus interdigitalis as a variety of T pulcherrima.

Fig. 120. M. reukaufii, CBS 5834. Vegetative and reukaufii cells formed in malt extract. Bar = 20(im.

Growth in 5% malt extract: After 3 days at 25°C, vegetative cells are ellipsoidal to cylindroidal, (2-6)x(4-18)(im, usually (2^)x(6-12)fxm, single or catenulate, reproducing by multilateral budding. In some strains longer cells occur, up to 35 |im. Chlamydospores are not present. After one month at 25°C, somewhat elongate chlamydospores are usually present, (4-10) x ( 8 30) |im, but usually (8-10) x (10-20) \im. They are highly refractile, and contain several to numerous lipid globules (Fig. 120); a thin ring and abundant sediment are present; a pellicle is absent. Growth on 10% malt agar: After one month at 25''C, growth is cream-colored, the surface is smooth and glistening, in some strains sparsely papillate, and the edge is entire to crenulate. Dalmau plate culture on corn meal agar: Aerobically, pseudomycelium is not produced; anaerobically, rudimentary pseudomycelium is profusely formed. Formation of ascospores: Asci arise from somewhat elongated chlamydospores that contain several to numerous lipid globules. Asci are ellipsoidopedunculate to clavate, (5-9) x ( 2 0 ^ 3 ) [im, usually (5-8) x (30-37) |im, containing two (rarely one) acicular to acerose ascospores, (0.7-1.l)x(7-30) (im (Fig. 121). Asci do not lyse at maturity. Asci develop on dilute (1:2 to 1:29), filtered V8 juice agar, and other dilute media after 7-21 days at 1 2 - 2 r C (Pitt and Miller 1968).

Fermentation: Glucose Galactose Sucrose Maltose

+ w/-

-

Lactose Raffinose Trehalose

Fig. 121. M. reukaufii, CBS 5834. Ellipsoidopedunculate asci and reukaufii cells on dilute V8 agar after 2 weeks at 18°C. Bar= 10 ^m.

266

Vb. Descriptions of teleomorphic ascomycetous genera and species

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V + + + + + V V w/-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Urease 2-Keto-D-gluconate + Gelatin hydrolysis 5-Keto-D-gluconate Casein hydrolysis + Cadaverine + Cycloheximide 1 [ig/ml + L-Lysine + Cycloheximide lOjXg/ml Ethylamine + Acid production 50% Glucose + Growth at SO^C + 10% NaCl/5% glucose + Growth at 37^C 12.5% NaCl/5% glucose w Starch synthesis Co-Q: 9 (Y. Yamada, personal communication, 1990). Mol% G + C: 41.3, CBS 5834 (BD: Mendonga-Hagler et al. 1985).

Origin of the strains studied: All strains were obtained from flowers over a wide geographic area, near Fort Smith, North West Territory, Canada (17); Saskatoon, Saskatchewan, Canada (5); Davis, Calif (1); Japan (1); State of Washington, U.S.A. (1). Type strain: CBS 5834 (UCD-FST 62-311) diploid, isolated by J.F.T. Spencer from fireweed flowers (Epilobium angustifolium at Fort Smith, N.WT., Canada. 39.10. Metschnikowia zobellii (van Uden & CasteloBranco) van Uden (1962) Synonyms: Metschnikowiella zobellii van Uden & Castelo-Branco (1961) Metschnikowia bicuspidata (Metschnikoff) Kamienski var. zobellii Fell & I.L. Hunter (1968)

Grow^th in 5% malt extract: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (6-ll)x(7-ll)|im. A pellicle and a ring may be formed. Grow^th on 10% malt agar: After one month at 25°C, the streak culture is yellowish or grayish, semidull to dull, sofl;, delicately punctulate to smooth. Dalmau plate culture on corn meal agar: A rudimentary pseudomycelium is formed. Formation of ascospores: Asci arise from vegetative cells and are generally clavate, 18-24|im long, and contain a single, needle-shaped ascospore, pointed at one end and nearly as long as the respective ascus (Fig. 122).

Fig. 122. M zobellii, CBS 4821. Asci and vegetative cells on V8 agar after 2 weeks at 1 8 T . Bar= 10 [xm.

Asci were observed on V8 agar after 6-20 days at 18T. Fermentation: Glucose Galactose Sucrose Maltose

+/w w -

Lactose Raffinose Trehalose

+ + v + + + + + V 1/w

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Cadaverine L-Lysine Ethylamine 50% Glucose 12.5% NaCl/5% glucose Starch synthesis

+ + + w + -

Urease Lipase Gelatin hydrolysis Casein hydrolysis Cycloheximide lOO^ig/ml + Acid production Growth at 30''C + Growth at SS^C

Co-Q: 9 (Yamada et al. 1977). Mol% G + C: 47.5, CBS 4821 (BD: Mendonga-Hagler et al. 1985).

Origin of the strains studied: Sea water and kelp off the southern California coast (3); gut content offish, La Jolla, southern California (1); sea water of the Clyde estuary, Scotland (4). Type strain: CBS 4821, isolated by van Uden and Castelo-Branco (1961) from sea water off La Jolla, California.

39. Metschnikowia Kamienski / M.W. Miller and H.J. Phaff

Comments on the genus The 10 species in the genus Metschnikowia are characterized by the formation of long needle-shaped or acicular ascospores without appendages. The asci are much larger than the vegetative cells. Six of the species have a terrestrial habitat and are usually found in the corolla of flowers or in decaying fruit or plant tissue; they are transmitted to new niches by insects, such as bees and drosophilids. The other four species (including two varieties) have aquatic habitats (marine, salt lakes or fresh water) and are usually associated with crustacean species and sometimes with fish or kelp. They may be pathogenic to certain crustaceans, e.g., brine shrimp (Artemia) and fresh water shrimp (Daphnia) (Lachance et al. 1976). Four of the terrestrial species form chlamydospores that are precursors of asci. The other two terrestrial species and the aquatic species lack chlamydospores and form asci from diploid vegetative cells or from zygotes of haploid complementary mating types (Table 30). Characteristics differentiating the species include fermentation of glucose, assimilation of various carbon compounds (Table 30), maximum temperature for growth, growth on media with high osmotic pressure, and ploidy of the vegetative cells. The production of pulcherrimin by M pulcherrima is variable and therefore not always a reliable diagnostic character. Mendonga-Hagler et al. (1993) estimated phylogenetic relationships among type strains

267

of the eight Metschnikowia species known at the time of their study. The extent of divergence of partial sequences of the large and small subunits of rRNA suggested that the aquatic and terrestrial species form two clusters within the genus. Among the terrestrial species, M lunata and M hawaiiensis were well separated from the others, with the latter so divergent that it might even be placed in a new genus. This study did not include the two recently described terrestrial species, M. agaves and M gruessii. Codreanu and Codreanu-Balcescu (1981) reported isolating Metschnikowia strains producing monosporic asci from infected Artemia and Daphnia specimens in Rumania. They proposed that these strains represented the original isolates made by Kamienski (1899) from Artemia salina and from Daphnia magna by Metschnikoff (1884), and that Wickerham's (1964a) neotype of M. bicuspidata, which formed two spores per ascus, should be rejected. Unfortunately, as far as we are aware, no strains isolated by the Rumanian team have been preserved or tested physiologically. Although their electronmicrographs clearly show that the asci contain single acicular spores, it is entirely possible that the number of spores per ascus varies from one to two, as is common in many other yeast genera. The present authors have therefore retained Wickerham's two-spored isolate of M bicuspidata from a strigeid trematode as the neotype of M. bicuspidata.

268

Vb. Descriptions of teleomorphic ascomycetous genera and species

40. Nadsonia Sydow M.W. Miller and H.J. Phaff Diagnosis of the genus Cells are lemon-shaped, ovoidal, or elongate. Vegetative reproduction by bud-fission at both poles; this process involves the formation of a bud-like structure on a very wide neck. The bud is separated by the formation of a cross wall, followed by fission. PseudomyceHum is not formed; a few chains of elongate cells may be present. Two mechanisms of ascospore formation are known. (1) Afi;er a heterogamic conjugation between the parent cell and a bud, the contents of the zygote move into another bud formed at the opposite end of the parent cell. This second bud is then delimited by a septum and becomes the ascus. (2) After a heterogamic conjugation between the parent cell and a bud, the bud is normally delimited by a septum and the parent cell becomes the ascus. One or more, rarely two, spherical, brownish, spiny- to warty-walled spores are formed. Spores contain a prominent lipid globule. Fermentation of glucose is present or absent. Nitrate is not utilized. No growth at 30°C or above. On malt extract a pellicle is usually formed. Diazonium blue B reaction is negative. Type species Nadsonia fulvescens (Nadson & Konokotina) Sydow Species accepted \. Nadsonia commutata Golubev (1973) 2. Nadsonia fulvescens (Nadson & Konokotina) Sydow (1912) a. Nadsonia fulvescens (Nadson & Konokotina) Sydow YSLV. fulvescens (1989) b. Nadsonia fulvescens var elongata (Konokotina) Golubev, M.Th. Smith, Foot & Kock (1989) Key to species 1. 2(1).

a b a b

Glucose fermented; growth in presence of 1 |ig/ml cycloheximide positive —> 2 Glucose not fermented; absence of growth in presence of 1 [xg/ml cycloheximide Maltose assimilated Maltose not assimilated

Systematic discussion of the species 40.1. Nadsonia commutata Golubev (1973) Growth in 5% malt extract: After 3 days at 15°C, cells are ovoidal to apiculate, (4.2-7.7)x(5.6-11.2) [im, single, in pairs or in short chains; budding is bipolar on a broad base (Fig. 123). After one month a ring and sediment are formed, sometimes a pellicle. Growth on 10% malt agar: Cell shapes and dimensions similar to those observed in malt extract. After one month at 18°C, the streak culture is cream-colored (brownish in sporulating cultures), smooth, semiglossy, texture is pasty and the border is entire to lobate. Dalmau plate culture on potato domyceHum is not formed.

agar: Pseu-

Formation of ascospores: Asci are formed by mechanism (2), following lysis of the wall separating a parent cell and a polar bud; the nucleus and other contents of the bud pass into the parent cell where karyogamy and meiosis take place. A new septum is produced separating the zygote from the bud. The parent cell, which has become the ascus, normally contains a single or rarely

N. commutata: p. 268 N. fulvescens var. fulvescens: p. 269 A^. fulvescens var, elongata: p. 269

two spheroidal, spiny to warty, brownish spores with a prominent lipid globule (Fig. 124). Sporulation occurs on YM or malt agar at 18°C in 7 days. Fermentation: absent. Assimilation (at 20"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

V

-

+

-

269

40. Nadsonia Sydow / M.W. Miller and H.J. Phaff

Fig. 123. A': commutata, CBS 6640. Cells grown in YM broth, for 7 days. Bar=10|im.

..-O Fig. 124. A^. commutata, CBS 6640. Ascus formed on YM agar after 7 days, 18°C. Bar=10|im.

Growth in 5% malt extract: After three days at room temperature, the cells are ovoidal to elongate or lemon-shaped, (5-8) x (8-16) [im, and occasionally longer, single, in pairs, or in short chains. Budding is bipolar on a broad base (Fig. 125). A septum forms across the constriction connecting bud and parent cell, and the two are separated by fission. A thin, smooth, dry creeping pellicle is present. After one month a thin pellicle and a sediment are present. Growth on 10% malt agar: After three days at room temperature, the cells are similar to those in malt extract. After one month at 18°C, the streak culture is grayish to cream-colored, nearly smooth, pasty, semidull, raised, border entire or lobulate. Dalmau plate culture on potato agar: Pseudomycelium absent or rudimentary; in the last case short chains of undifferentiated elongate cells are formed. Formation of ascospores: Sporulation, although not observed in the wmQty fulvescens, takes place according to the original description as described for the genus under the Diagnosis. When an ascus of the variety elongata is mature it normally separates from the two empty cells of a triad by fission (Fig. 126). Sporulation by the variety elongata was observed on 10% malt agar after 4 days at 18T.

Additional assimilation tests and other growth characteristics: Urease 2-Keto-D-gluconate Lipase 5-Keto-D-gluconate Gelatin hydrolysis Cadaverine Casein hydrolysis L-Lysine Cycloheximide 1 |ig/ml Ethylamine Acid production 50% Glucose Growth at 22''C 5% NaCl/5% glucose Growth at 25°C Starch synthesis Co-Q: 6 (Yamada et al. 1992c). Mol% G + C: 40.0, CBS 6640 (BD: H.J. Phaff, unpublished).

Origin of the strains studied: CBS 6640 from field soil, East Falkland Island (South Atlantic ocean) (Golubev 1973); VKM Y-2610 from soil, Carpathian Mts., Eastern Europe. Type strain: CBS 6640 (VKM Y-1573).

Fig. 125. N. fulvescens var. elongata, UCD-FST 67-485. Scanning electron micrograph of typical bipolar budding cell. Bar = 5 ^im.

40.2. Nadsonia fulvescens (Nadson & Konokotina) Sydow (1912) This species has two varieties: Nadsonia fulvescens (Nadson & Konokotina) Sydow var. fulvescens (1989)

# • #

Synonym: Guilliermondia fulvescens Nadson & Konokotina (1911)

Nadsonia fulvescens var. elongata (Konokotina) Golubev, M.Th. Smith, Foot & Kock (1989) Synonyms: Guilliermondia elongata Konokotina (1913) Nadsonia richteri Kostka (1927) Saccharomycodes sinensis Yue (1977)

/

\» •®

Fig. 126. N. fulvescens var. elongata, UCD-FST C98. Ascus formed by typical triad formation on malt agar after 4 days. Bar= 10 p.m.

270

Fermentation:

Glucose Galactose Sucrose Maltose

Vb. Descriptions of teleomorphic ascomycetous genera and species

+ + + w

Lactose Raffinose Trehalose

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation (at 20"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + +

+ +

V + + + w/+ V Additional assimilation tests and other g;ro>^ characteristics: 2-Keto-D-gluconate Lipase 5 -Keto-D-gluconate Gelatin hydrolysis Cadaverine + Casein hydrolysis L-Lysine + Cycloheximide 1 [ig/ml V Ethylamine Cycloheximide 10|ig/ml 50% Glucose Acid production Growth at 25T 5% NaCl/5% glucose Growth at 30T Starch synthesis Urease Co-Q: 6 (Yamada et al. 1976a). Mol% G + C: 41.5, CBS 2596 (BD: H.J. Phaff, unpunished).

+

-

+

-

Supplementary description of A^. fulvescens van elongata: Glucose is the only sugar fermented. Galactose, sucrose, maltose, mannitol, and a-methyl-D-glucoside are not assimilated. The G + C content of the nuclear DNA of CBS 2594 is 41.8 mol%. Morphologically the varieties are similar. Most strains of the variety elongata still sporulate, including the type strain that was isolated in 1913. In contrast, none of the strains of the variety fulvescens produced ascospores, which was already noted by Stelling-Dekker(1931). Origin of the strains belonging to the variety fulvescens'. CBS 2596, from exudate of an oak, Leningrad, Russia; VKM Y-2618 and Y-2619, from the All-Union Institute of Agricultural Microbiology, Russia, source unknown. Type strain: CBS 2596, received by CBS from Nadson and Konokotina in 1913. Origin of strains belonging to the variety elongata: From exudates of the following trees in Japan: buckeye (Aesculus sp.) (1), alder (Alnus sp.) (3), birch

(Betula sp.) (18), hornbeam {Carpinus sp.) (2), dogwood (Cornus sp.) (1), Eurya sp. (1), beech {Fagus sp.) (1), Prunus sp. (5), bamboo {Sinoarundinaria sp.) (1) (Phaff et al. 1972); from birch exudate, Russia (1); a strain received by CBS in 1927 from Nadson labeled N. fulvescens (source unknown) (1); a strain labeled Nadsonia richteri (CBS 2593) isolated from hornbeam sap {Carpinus betulus) in Czechoslovakia. Type strain: CBS 2594, isolated by Konokotina in 1913 from birch exudate in the Smolensk area of Russia. Comments: The two varieties of N. fulvescens were originally described as separate species based on a number of differences in physiological properties, some of which were found to be unstable. Golubev et al. (1989) reduced A^. fulvescens and N. elongata to varietal status on the basis of relatively high DNA complementarity (61-71% relative binding). We agree with their interpretation of DNA relatedness values and accept their varietal status as recommended by Golubev et al. (1989). Comments on the genus Members of the genus Nadsonia were originally isolated from tree exudates in Russia in the early part of the 20th century (Stelling-Dekker 1931). Subsequent ecological studies of yeast habitats revealed that Nadsonia species, then known, were found only in tree exudates collected in eastern Europe, Japan, and in some locations of Southeastern USA (Phaff and Starmer 1987). Other areas surveyed extensively for yeast florae from tree exudates and soils indicated that Nadsonia species were lacking. Golubev's (1973) discovery of a fundamentally new species of Nadsonia in soil from East Falkland Island in the Atlantic Ocean and another isolate of the same species from soil in the Carpathian mountains of eastern Europe (Golubev et al. 1987) revealed an additional soil habitat for members of this genus. Because of the low maximum temperature for growth (22-27°C) of members of Nadsonia (Golubev et al. 1989) it is possible that the presence of Nadsonia species may have been overlooked in other ecological surveys. The characteristic brown pigment in heavily sporulating cultures of Nadsonia has been identified as a melanin compound located in the outer layer of the ascospore wall (Semenova and Golubev 1988). The life cycle of N. commutata has been described in detail by Semenova and Golubev (1986). Note added in proof Analysis of 5' end large subunit rDNA nucleotide sequences has demonstrated that Saccharomycodes sinensis and Nadsonia fulvescens var. elongata are conspecific, and that Schizoblastosporion starkeyi-henricii is an anamorphic member of the Nadsonia clade (C.R Kurtzman and C.J. Robnett, manuscript in preparation).

41. Pachysolen Boidin & Adzet / C.P. Kurtzman

111

41. Pachysolen Boidin & Adzet C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal to ellipsoidal and may have one or two small apiculi. Pseudohyphae may be poorly developed or absent. True hyphae are not formed. Asci are quite unusual and their presence allows immediate recognition of this genus. Generally, a tube grows from a vegetative cell and the end of the tube forms an ascus usually containing four ascospores. The walls of the cell and tube become quite thickened and refractile except for the end bearing the ascospores. The ascospores are hemispheroidal with a narrow ledge at the base. Glucose is fermented. Nitrate is assimilated. Coenzyme Q-8 is present. Diazonium blue B reaction is negative. Type species Pachysolen tannophilus Boidin & Adzet Species accepted 1. Pachysolen tannophilus Boidin & Adzet (1957) Systematic discussion of tlie species 41.1. Pachysolen tannophilus Boidin & Adzet (1957) Synonyms: Hansenula tannophilus (Boidin & Adzet) Campbell (1973) Pachysolen pelliculatus Boidin & Adzet (1957)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.55.0)X(2.0-7.0) |im, and usually have one or two buds. Growth is mucoid to butyrous and tannish-white. Growth on the surface of assimilation media: Pellicles are formed by some strains. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass exhibits simple undifferentiated pseudohyphae as well as occasional highly branched strands. True hyphae are not formed. Aerobic growth is tannish-white, glistening, mucoid, low convex with margin entire and with a faint smell of esters. Formation of ascospores: The ascus forms when a vegetative cell produces a stout tube, generally at one end. Depending upon the culture medium, and perhaps other factors, tubes may be quite short or up to 60 [im in length and are straight or curved. The tip of the tube enlarges to form the ascus, and consequently, the tube may be regarded as an ascophore. Asci contain up to four hemispheroidal ascospores that have a narrow ledge at the base. The ascus wall deliquesces, releasing the spores. Once this happens, it is seen that the ascus formed within what appears to be a V-shaped notch at the end of the ascophore. Ascophore walls appear greatly thickened and become quite refractile. This characteristic of highly refractile ascophores bearing terminal asci makes Pachysolen readily identifiable under the light microscope even at moderate magnifications (Fig. 127). Asci may be conjugated or unconjugated. The type strain NRRL Y-2460 forms more unconjugated asci than NRRL

Y-2461, Y-2462, and Y-2463. Single-spore isolates from NRRL Y-2460 gave sporogenous colonies, therefore, the species appears homothallic (Wickerham 1970b). Ascospores were observed on YM-, Gorodkowa-, and malt extract agar, after 1 week at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

Lactose Raffinose Trehalose

-

+ +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

s

-

+ +

V

-

+ +

-

+

-

+ +

-

+

-

+

-

+

-

Additional assimilation tests and other grow^th characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 3 7°C + 10% NaCl/5% glucose + Co-Q: 8 (Yamada et al. 1973a). Mol% G + C: 32.6, CBS 4044 and CBS 4045 (BD: C.R Kurtzman, unpublished); 43.0, CBS 4044 {T^\ Nakase and Komagata 1968a)

272

Vb. Descriptions of teleomorphic ascomycetous genera and species

liquors and a fifth strain from shoe leather. Asci of R tannophilus are borne on the tips of refractile tubes which seem to serve as ascophores. P. tannophilus was originally separated from P. pelliculatus because the latter species formed a mat growth on solid media, produced a thin, dry pellicle, had greater development of pseudohyphae, and gave a weaker fermentation of glucose. These differences seem insufficient to differentiate the two species and P. pelliculatus is regarded to be a synonym. Wickerham (1970b) showed that a mat form could be selected from R tannophilus by allowing an amoeba to feed on the cultures. The amoeba preferentially & ingested mucoid colonies and allowed proliferation of the mat form. Fig. 127. P. tannophilus, CBS 4044. Thick-walled, refractile ascophores In recent years, P tannophilus has received considerable bearing terminal asci, after 1 week on YM agar at 25°C. Bar=5 [im. attention because of its ability to ferment D-xylose, the Origin of the strains studied: NRRL Y-2460 (IRIC major pentose of hemicellulosic plant residues (Schneider 145, CBS 4044, extract of chestnut {Castanea vesca), et al. 1981, Slininger et al. 1982, Kurtzman et al. 1982). Ludwigshafen, Germany; NJIRL Y-2461 (IRIC 146), Until this discovery, yeasts were not known to produce NRRL Y-2462 (IRIC 152), NRRL Y-6704 (IRIC 164, ethanol from pentoses. Soon after the preceding work, CBS 4045), the type strain oiP. penicillatus, from extracts Pichia stipitis (Toivola et al. 1984) and Candida shehatae of acacia {Acacia mollissima), Ludwigshafen, Germany; (du Preez and van der Walt 1983) were also demonstrated NRRL Y-2463 (IRIC 153), shoe leather, Strasbourg, to ferment D-xylose, thus providing three species capable France. of converting pentoses from biomass to fiiel alcohol. Type strain: CBS 4044 (NRRL Y-2460), designated Slininger et al. (1987) reviewed the biochemistry and by Boidin and Adzet (1957) as the type strain. genetics of D-xylose fermentation by P tannophilus. Kurtzman (1990b) estimated phylogenetic relatedness Comments on the genus among the three species from extent of rRNA divergence Pachysolen is a rare and unusual yeast. The only reported and showed Pichia stipitis and Candida shehatae to be isolations are those of Boidin and Adzet (1957), who separate but closely related species whereas P tannophilus obtained four strains from wood extracts used in tanning was much more distantly related.

52^0

42. Pichia E.G. Hansen emend. Kurtzman / C.P. Kurtzman

273

42. Pichia E.G. Hansen emend. Kurtzman C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Some species may also form arthroconidia. Cells are spheroidal, ellipsoidal, or elongate and occasionally may be tapered, but they are not ogival in shape. Pseudohyphae and true hyphae may be produced by some species. Asci produce one to four (infrequently more) ascospores that may be hat-shaped (galeate), hemispheroidal, or spheroidal with a ledge. Generally asci are deliquescent, but occasionally they are persistent. Asci are unconjugated, or if conjugated, they may show conjugation between bud and parent or between independent cells. Hyphal or pseudohyphal cells may serve as asci, but they do not become swollen or spindle-like. Asci are not borne on ascophores. Species are homothallic or heterothallic. Sugars may be fermented. Nitrate may be assimilated. Diazonium blue B reaction is negative. Type species Pichia membranifaciens E.G. Hansen Species accepted 1. Pichia acaciae van der Walt (1966) 2. Pichia alni (Phaff, M.W. Miller & Miranda) Kurtzman (1984) 3. Pichia americana (Wickerham) Kurtzman (1984) 4. Pichia amethionina Starmer, Phaff, Miranda & M.W. Miller (1978) a. Pichia amethionina Starmer, Phaff, Miranda & M.W. Miller var. amethionina (1978) b. Pichia amethionina var. pachycereana Starmer, Phaff, Miranda & M.W. Miller (1978) 5. Pichia amylophila Kurtzman, Smiley, Johnson, Wickerham & Fuson (1980) 6. Pichia angophorae M.W Miller & Barker (1968) 7. Pichia angusta (Teunisson, Hall & Wickerham) Kurtzman (1984) 8. Pichia anomala (E.G. Hansen) Kurtzman (1984) 9. Pichia antillensis Starmer, Phaff, Tredick, Miranda & Aberdeen (1984) 10. Pichia barkeri Phaff, Starmer, Tredick-Kline & Aberdeen (1987) 11. Pichia besseyi Kurtzman & Wickerham (1972) 12. Pichia bimundalis (Wickerham & Santa Maria) Kurtzman (1984) 13. Pichia bispora (Wickerham) Kurtzman (1984) 14. Pichia bovis van Uden & do Garmo-Sousa (1957) 15. Pichia burtonii Boidin, Pignal, Lehodey, Vey & Abadie (1964) 16. Pichia cactophila Starmer, Phaff, Miranda & M.W. Miller (1978) 17. Pichia canadensis (Wickerham) Kurtzman (1984) l^. Pichia capsulata (Wickerham) Kurtzman (1984) 19. Pichia caribaea Phaff, Starmer, Lachance, Aberdeen & Tredick-Kline (1992) 20. Pichia castillae Santa Maria & Garcia Aser (1970) 21. Pichia chambardii (G. Ramirez & Boidin) Phaff (1956) 22. Pichia ciferrii (Lodder) Kurtzman (1984) 23. Pichia delftensis Beech (1965) 24. Pichia deserticola Phaff, Starmer, Tredick & Miranda (1985) 25. Pichia dryadoides (D.B. Scott & van der Walt) Kurtzman (1984) 26. Pichia euphorbiae van der Walt & Opperman (1983) 27. Pichia euphorbiiphila (van der Walt) Kurtzman (1984) 28. Pichia fabianii (Wickerham) Kurtzman (1984) 29. Pichia farinosa (Lindner) E.G. Hansen (1904) 30. Pichia fermentans Lodder (1932) 31. PichiafinlandicaKurtzman (1984) 32. Pichiafluxuum(Phaff & Knapp) Kreger-van Rij (1964) 33. Pichia galeiformis Endo & S. Goto (1987) 34. Pichia glucozyma (Wickerham) Kurtzman (1984)

274

Vb. Descriptions of teleomorphic ascomycetous genera and species

35. Pichia guilliermondii Wickerham (1966) 36. Pichia hampshirensis Kurtzman (1987) 37. Pichia haplophila Shifrine & Phaff (1956) 38. Pichia heedii Phaff, Starmer, Miranda & M.W. Miller (1978) 39. Pichia heimii Pignal (1970) 40. Pichia henricii (Wickerham) Kurtzman (1984) 41. Pichia holstii (Wickerham) Kurtzman (1984) 42. Pichia inositovora Golubev & Blagodatskaya (1981) 43. Pichia jadinii (A. & R. Sartory, Weill & Meyer) Kurtzman (1984) 44. Pichia japonica Kurtzman (1987) 45. Pichia kluyveri Bedford ex Kudryavtsev (1960) a. Pichia kluyveri Bedford ex Kudryavtsev var. kluyveri (1987) b. Pichia kluyveri var. cephalocereana Phaff, Starmer & Tredick-Kline (1987) c. Pichia kluyveri var. eremophila Phaff, Starmer & Tredick-Kline (1987) 46. Pichia kodamae van der Walt & Yarrow (1982) 47. Pichia lynferdii (van der Walt & E. Johannsen) Kurtzman (1984) 48. Pichia media Boidin, Pignal, Lehodey, Vey & Abadie (1964) 49. Pichia membranifaciens (E.G. Hansen) E.G. Hansen (1904) 50. Pichia methanolica Makiguchi (1974) 51. Pichia methylivora Kumamoto & Seriu (1986) 52. Pichia mexicana Miranda, Holzschu, Phaff & Starmer (1982) 53. Pichia meyerae van der Walt (1982) 54. Pichia minuta (Wickerham) Kurtzman (1984) a. Pichia minuta (Wickerham) Kurtzman var. minuta (1984) b. Pichia minuta var. nonfermentans (Wickerham) Kurtzman (1984) 55. Pichia mississippiensis Kurtzman, Smiley, Johnson, Wickerham & Fuson (1980) 56. Pichia naganishii K. Kodama (1974) 57. Pichia nakasei J.A. Barnett, Payne & Yarrow (1983) 58. Pichia nakazawae K. Kodama (1975) a. Pichia nakazawae K. Kodama var. nakazawae (1975) b. Pichia nakazawae var. akitaensis K. Kodama (1975) 59. Pichia norvegensis Leask & Yarrow (1976) 60. Pichia ofunaensis (Makiguchi & Y. Asai) Kurtzman (1996) 61. Pichia ohmeri (Etchells & T.A. Bell) Kreger-van Rij (1964) 62. Pichia onychis Yarrow (1965) 63. Pichia opuntiae Starmer, Phaff, Miranda, M.W Miller & Barker (1979) 64. Pichia pastoris (Guilliermond) Phaff (1956) 65. Pichia petersonii (Wickerham) Kurtzman (1984) 66. Pichia philodendri (van der Walt & D.B. Scott) Kurtzman (1984) 67. Pichia philogaea van der Walt & E. Johannsen (1975) 68. Pichia pijperi van der Walt & Tscheuschner (1957) 69. Pichia pini (Hoist) Phaff (1956) 70. Pichia populi (Phaff, Y Yamada, Tredick & Miranda) Kurtzman (1984) 1 \. Pichia pseudocactophila Holzschu, Phaff, Tredick & Hedgecock (1983) 72. Pichia quercuum Phaff & Knapp (1956) 73. Pichia rabaulensis Soneda & Uchida (1971) 74. Pichia rhodanensis (G. Ramirez & Boidin) Phaff (1956) 75. Pichia salicaria Phaff, M.W. Miller & Spencer (1964) 76. Pichia scolyti (Phaff & Yoneyama) Kreger-van Rij (1964) 77. Pichia segobiensis Santa Maria & Garcia Aser (1977) 78. Pichia silvicola (Wickerham) Kurtzman (1984) 79. Pichia spartinae Ahearn, Yarrow & Meyers (1970) 80. Pichia stipitis Pignal (1967) 81. Pichia strasburgensis (G. Ramirez & Boidin) Phaff (1956) 82. Pichia subpelliculosa Kurtzman (1984) 83. Pichia sydowiorum (D.B. Scott & van der Walt) Kurtzman (1984)

275

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman %A.Pichia 85. Pichia (1985) 86. Pichia 87. Pichia 88. Pichia 89. Pichia 90. Pichia 91. Pichia

tannicola F.H. Jacob (1969) thermotolerans (Starmer, Phaff, Miranda, M.W. Miller & Barker) Holzschu, Phaff, Tredick & Hedgecock toletana (Socias, C. Ramirez & Pelaez) Kreger-van Rij (1964) trehalophila Phaff, M.W. Miller & Spencer (1964) triangularis M.Th. Smith & Batenburg-van der Vegte (1986) veronae K. Kodama (1974) wickerhamii (van der Walt) Kreger-van Rij (1964) xylosa PhafF, M.W. Miller & Shifrine (1956)

Key to species See Tables 31-35. 1. a Hexadecane is assimilated -^ 2 b Hexadecane is not assimilated -^ 18 2(1) a Sucrose is assimilated -^ 3 b Sucrose is not assimilated —^14 3(2) a Galactose is assimilated -^ 4 b Galactose is not assimilated 4(3) a Raffinose is assimilated —^ 5 b Raffinose is not assimilated —> 10 5(4). a Soluble starch is assimilated b Soluble starch is not assimilated —> 6 6(5). a L-Arabinose is assimilated -^ 7 b L-Arabinose is not assimilated 7(6). a Erythritol is assimilated -^ 8 b Erythritol is not assimilated 8(7) a Growth in vitamin-free medium b Absence of growth in vitamin-free medium 9(7) a Trehalose fermentation is strong b Trehalose fermentation is weak

P. spartinae:

p. 341

P. burtonii:

p. 293

P. ohmeri:

p. 329

P. guilliermondii: p. 308 P. heimii: p. 311 -^ 9 P. mexicana: p. 322 P. scolyti: p. 339

Table 31 Key characters of Pichia species that assimilate hexadecane Assimilation^'*'

Fermentation^'^

Species G

Ga

Ma

Tr

Ga

Su

Pichia acaciae

+

V

+

+

+

P. burtonii

+

V

X

+

+

P. castillae

-

-

+

V

V

P. guilliermondii

+

V

P. haplophila

-

-

-

-

P. farinosa

P. heimii

+

+

V

+

+

+

+

-

P. media

-

-

-

-

+

P. mexicana

+

X

-

+

+

+

+

P. nakazawae var. nakazawae

+

+

w

+

+

P. nakazawae var. akitaensis

+

-

w

w

P. ohmeri

+

X

V

P. philogaea

+

w

V

P. scolyti

w

w

V

P. segobiensis

+

+

P. spartinae

+

P. stipitis

+

L-Ar

Rh

Er

-

+

+

V

+ +

V

-

+

V

-

+

-

+

+

+

+

+

-

-

+

-

+

+

V

+

+

+

+

+

+

-

-

+

+

-

V

+

+

-

+

+

+

-

w

+

+

+

-

+

+

+

-

V

-

+

+

w

+

+

+

Mel

-

+

-

+

+

-

+

-

+

+

+

+

+

-

V

-

-

+

+

+

+

Raf

Vfree^'^

Ma

+

Mz

St

-

+ + -

-

+ -

-

-

-

-

+ -

-

+

-

-

-

-

+

-

+

+ +

-

+

+ -

-

+

-

-

-

-

^ Abbreviations: G, glucose; Ga, galactose; Su, sucrose; Ma, maltose; Tr, trehalose; Mel, melibiose; Raf, raffinose; Mz, melezitose; St, soluble starch; L-Ar, L-arabinose; Rh, L-rhamnose; Er, erythritol; Vfree, vitamin-free medium. ^ Symbols: +, strong positive; x, weak or strong; w, weak; v, variable; - , negative.

276

Vb. Descriptions of teleomorphic ascomycetous genera and species Table 32 Key characters of Pichia species that do not assimilate hexadecane but do assimilate /^-acetyl-D-glucosamine Glucose fermentation

Species

Pichia angophorae

+

P. barkeri

+

P. capsulata

+

P. delftensis

w/-

P. fermentans

+

P. galeiformis

-

P holstii

+

P. inositouora

-

P. kluyueri var. kluyueri

+

P. kluyueri var. cephalocereana

s

P. kluyueri var. eremophila

w/-

P. membranifaciens^

w/-

P. methyliuora

L-Sor

Su

Ma

Mel

Raf

D-Xy

L-Ar

D-Gm

Rbl

Cit

-

P. naganishii

+

P. ofunaensis

w

P. tannicola

X

P. toletana

Assimilation^'^ Ga

w

P. triangularis

w/-

P. xylosa

w/-

^ Abbreviations: Ga, galactose; L-Sor, L-sorbose; Su, sucrose; Ma, maltose; Mel, melibiose; Raf, raffinose; D-Xy, D-xylose; L-Ar, L-arabinose; D-Gm, D-glucosamine; Rbl, ribitol; Cit, citrate. ^ Symbols: +, strong positive; s, slow, positive; 1, latent, positive; w, weak; w/-, weak or negative; x, weak or strong; v, variable; -, negative. ^ See Comments (p. 320) for further discussion on separation of P. membranifaciens from phenotypically similar taxa.

10(4). a b 11(10). a b 12(11). a b 13(11). a b 14(2). a b 15(14). a b 16(14). a b 17(16). a b 18(1). a b 19(18). a b 20(19). a b 21(20). a b 22(21). a b

Melezitose is assimilated -^ 11 Melezitose is not assimilated L-Rhamnose is assimilated —> 12 L-Rhamnose is not assimilated -^ 13 Galactose fermentation is strong; maltose fermentation is weak Galactose fermentation is weak; maltose fermentation is strong Soluble starch is assimilated Soluble starch is not assimilated Glucose is fermented -^ 15 Glucose is not fermented -^ 16 Maltose is fermented Maltose is not fermented Melibiose is assimilated Melibiose is not assimilated -^ 17 Maltose is assimilated Maltose is not assimilated A'^-Acetyl-D-glucosamine is assimilated ^-19 A'^-Acetyl-D-glucosamine is not assimilated ^ 3 3 Galactose is assimilated -^ 20 Galactose is not assimilated -^ 25 L-Sorbose is assimilated -^ 21 L-Sorbose is not assimilated -^ 23 Melibiose is assimilated Melibiose is not assimilated —> 22 L-Arabinose is assimilated L-Arabinose is not assimilated

P. segobiensis: p. 340 P nakazawae var. nakazawae: P. stipitis: P. nakazawae var. akitaensis: P. philogaea:

p. p. p. p.

327 342 327 333

P. acaciae: p. 282 P. farinosa: p. 304 P castillae: p. 298 P. media: p. 318 P haplophila: p. 310

P ofunaensis:

p. 328

P. holstii: p. 312 P. inositouora: p. 313

277

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman Table 33 Key characters of Pichia species that assimilate methanol but do not assimilate A/^-acetyl-D-glucosamine Species

Glucose

Assimilation^ L-Sorbose

Maltose

Cellobiose

Trehalose

D-Arabinose

V V

+ +

V V

Erythritol

Pichia angusta

+

V

+

P.finlandica

-

+

-

-

+

P. glucozyma

+

+

+

P. henricii

-

+

V

P. kodamae

+

+

P. methanolica

+

+

P. minuta var. minuta

X

+

+

V

-

P. minuta var. nonfermentans

-

+

+

-

-

P. pastoris

+

-

+

-

-

P. philodendri

-

-

+

-

+

P. pini

V

+

+

V

+

P. trehalophila

+

-

+

V

+

-

Galactitol

Nitrate

+ +

V

+

+

+

-

+

-

+

+

-

+

+

-

-

+

+

X

+

^ Symbols: +, strong positive; x, weak or strong; v, variable; -, negative.

23(20). a b 24(23). a b 25(19). a b 26(25). a b 27(26). a b

Sucrose is assimilated -^ 24 Sucrose is not assimilated D-Glucosamine is assimilated D-Glucosamine is not assimilated Sucrose is assimilated -^ 26 Sucrose is not assimilated —^ 28 Raffinose is assimilated Raffinose is not assimilated -^ 27 L-Arabinose is assimilated L-Arabinose is not assimilated

28(25). a b 29(28). a b 30(29). a b 31(30). a b c 32(30). a

Maltose is assimilated Maltose is not assimilated -^ 29 Ribitol is assimilated P delftensis: Ribitol is not assimilated -^30 Glucose is strongly fermented ^^31 Glucose fermentation is slow, weak or absent -^ 32 Citrate and D-xylose are strongly assimilated P. fermentans: Citrate is not assimilated; D-xylose assimilation is weak or absent; no killer activity against Candida glabrata .. P. barkeri: Citrate and D-xylose assimilation are weak or absent; killer activity against Candida glabrata .... P. kluyveri var. kluyueri: Glucose is not fermented; D-glucosamine and citrate are not assimilated P. galeiformis: P. membranifaciens: Glucose fermentation is slow and usually late; D-glucosamine and citrate are assimilated . . P. kluyveri var. cephalocereana: Glucose fermentation is weak or absent; D-glucosamine and citrate are assimilated P kluyveri var. eremophila: P. membranifaciens: Glucose fermentation is weak or absent; L-sorbose is assimilated P. membranifaciens: Methanol assimilation is weak or strong -^ 34 Methanol is not assimilated -^ 45 Maltose is assimilated P. angusta: Maltose is not assimilated ^ 3 5 Cellobiose is assimilated -^ 36 Cellobiose is not assimilated -^ 42 Erythritol is assimilated -^ 37 Erythritol is not assimilated ^ 4 1 Galactitol is assimilated P methanolica: Galactitol is not assimilated -^38 Nitrate is assimilated -^ 39 Nitrate is not assimilated -^ 40 Glucose is fermented P. glucozyma: Glucose is not fermented P. henricii:

b c d 33(18). a b 34(18). a b 35(34). a b 36(35). a b 37(36). a b 38(37). a b 39(38). a b

P. tannicola: p. 345 P. naganishii: p. 325 P triangularis: p. 348 P. methyliuora: p. 321 P. angophorae: P. toletana: P. xylosa: P. capsulata:

p. 286 p. 346 p. 350 p. 296 p. 299

p. pppppppp-

305 289 315 307 319 316 316 319 319

p. 286

p. 321

p. 307 p. 311

278

Vb. Descriptions of teleomorphic ascomycetous genera and species Table 34 Key characters of Pichia species that assimilate raffinose but do not assimilate #-acetyl-D-glucosamine

Species

Assimilation^ Galactose

Melibiose

Soluble ^arch

Growth in

L-Rhamnose Erythritol

Ribitol

'"^'''"•"'

Pichia anomala

v

-

+

-

+

v

P. ciferrii

+

-

+

X

+

+

P.fabianii

-

P jadinii

_

-

+

P. lynferdii P. onychis

+ _

P petersonii

-

P. rabaulensis

_

P. strasburgensis

+

-

P subpelliculosa

v

-

P. sydowiorum P. veronae

+ _

_

_

_

_

_

-

_

_

_

Y

-

+ v

+

_

V

_

+ +

+ +

-

.

+ +

+ _

_ -

_

+

-

+

_

-

+

-

+

v

+ _

+

+ +

_ +

+

4 +

_

-

_

_

-

Nitrate

-

+

+ _

_ -

+

+ _

_

^ Symbols: +, strong positive; x, weak or strong; v, variable; -, negative.

40(38 a b 41(36; a b 42(35; a b 43(42; a b 44(42; a b 45(33 a b 46(45 a b 47(46; a b 48(47; a b 49(48; a b 50(49; a b 51(47 a b 52(51 a b 53(52; a b 54(53; a b 55(54; a b 56(55 a b 57(45; a b 58(57 a b 59(58; a b

Trehalose is assimilated Trehalose is not assimilated Glucose is fermented Glucose is not fermented Glucose is fermented —> 43 Glucose is not fermented —> 44 L-Sorbose is assimilated L-Sorbose is not assimilated D-Arabinose is assimilated D-Arabinose is not assimilated Raffinose is assimilated -^ 46 Raffinose is not assimilated -^57 Melibiose is assimilated Melibiose is not assimilated —^ 47 Erythritol is assimilated —>• 48 Erythritol is not assimilated -^ 51 Growth in vitamin-fi-ee medium -^ 49 Absence of growth in vitamin-free medium Soluble starch is assimilated ^ 5 0 Soluble starch is not assimilated L-Rhamnose is assimilated L-Rhamnose is not assimilated Galactose is assimilated Galactose is not assimilated —> 52 Soluble starch is assimilated Soluble starch is not assimilated —> 53 Growth in vitamin-free medium Absence of growth in vitamin-free medium —> 54 Ribitol is assimilated Ribitol is not assimilated ^ 5 5 Nitrate is assimilated Nitrate is not assimilated -^ 56 L-Rhamnose is assimilated L-Rhamnose is not assimilated Growth in vitamin-free medium Absence of growth in vitamin-free medium -^58 Galactose is assimilated —> 59 Galactose is not assimilated -> 60 Glucose is fermented Glucose is not fermented

P. pini: P. kodamae: P. minuta var. minuta: P. minuta var. nonfermentans:

p- 334 p- 317 p- 324 p- 324

P. trehalophila: p- 347 P. pastoris: p- 331 P finlandica: p- 305 P. philodendri: p- 333 P. sydowiorum: p. 344

P. subpelliculosa: p. 344 P lynferdii: P ciferrii: P anomala: P. strasburgensis:

p. 317 p. 299 p. 287 p. 343

P.fabianii:

p. 303

P. jadinii:

p. 314

P. rabaulensis: p. 337 P petersonii:

p. 332

P. veronae: p. 348 P. onychis: p. 330 P. dryadoides: p. 301

P. silvicola: p. 340 P. chambardii: p. 298

42. Pichia E.C. Hansen emend. Kurtzman / C.R Kurtzman 60(58). a Sucrose is assimilated -^ 61 b Sucrose is not assimilated -^ 74 61(60). a Melezitose is assimilated —> 62 b Melezitose is not assimilated P. meyerae: 62(61). a Soluble starch is assimilated -^ 63 b Soluble starch is not assimilated -^ 64 63(62). a Salicin is assimilated P. bovis: b Salicin is not assimilated P. amylophila: 64(62). a Nitrate is assimilated -^ 65 b Nitrate is not assimilated —» 69 65(64). a D-Arabinose is assimilated P. bimundalis: b D-Arabinose is not assimilated —> 66 66(65). a L-Rhamnose is assimilated -^ 67 b L-Rhamnose is not assimilated P. euphorbiiphila: 67(66). a Growth at 37''C P canadensis: b Absence of growth at 37T -^ 68 68(67). a True hyphae are formed; early (1-10 days) weak or strong fermentation of glucose P. americana: b True hyphae are formed; glucose fermentation is absent or weak and late (more than 10 days) P. bispora: c True hyphae are not formed; glucose fermentation is absent P. alni: 69(64). a Glucose is fermented -^ 70 b Glucose is not fermented P. canadensis: 70(69). a 2-Keto-D-gluconate is assimilated P. wickerhamii: b 2-Keto-D-gluconate is not assimilated ^ 7 1 71(70). a L-Arabinose is assimilated -^ 72 b L-Arabinose is not assimilated -^ 73 72(71). a True hyphae are formed; sucrose is weakly fermented P. euphorbiae: b True hyphae are formed; sucrose is not fermented P. mississippiensis: c True hyphae are not formed P. bovis: 73(71). a Growth at 37*'C; true hyphae are often formed; gelatin is not liquified P. rhodanensis: b Growth at 37°C; true hyphae are not formed; gelatin is weakly liquified P. japonica: c Absence of growth at 37*'C P. hampshirensis: 74(60). a Mannitol is assimilated -^ 75 b Mannitol is not assimilated -^ 85 75(74). a Glucose is fermented —> 76 b Glucose is not fermented -^ 79 76(75). a L-Sorbose is assimilated P. pijperi: b L-Sorbose is not assimilated —> 77 11{16). a Cellobiose is assimilated P. quercuum: b Cellobiose is not assimilated -^ 78 78(77). a D-Glucitol is assimilated P besseyi: b D-Glucitol is not assimilated P caribaea: 79(75). a D-Xylose is assimilated -^ 80 b D-Xylose is not assimilated —> 81 80(79). a Nitrate is assimilated P. populi: b Nitrate is not assimilated P. salicaria: 81(79). a Citrate is assimilated -^ 82 b Citrate is not assimilated -^ 83 82(81). a Cellobiose is not assimilated; salicin assimilation is variable; isolated from columnar cacti, West Indies P. antillensis: b Cellobiose assimilation is variable; salicin is assimilated; isolatedfi*omOpuntia cacti, Australia P. opuntiae: 83(81). a Cellobiose is assimilated P. thermotolerans: b Cellobiose is not assimilated —^ 84 84(83). a D-Glucitol is assimilated P. fluxuum: b D-Glucitol is not assimilated P. amethionina var. pachycereana: 85(74). a D-Glucosamine is assimilated —» 86 b D-Glucosamine is not assimilated —> 88 86(85). a Cellobiose is assimilated P. noruegensis: b Cellobiose is not assimilated -^ 87 87(86). a D-Xylose is assimilated weakly or latently; asci form two hat-shaped ascospores P. cactophila: b D-Xylose is not assimilated; asci form four hat-shaped ascospores P. pseudocactophila: 88(85). a Growth in osmotic medium (10% sodium chloride+ 5% glucose) P. nakasei: b Absence of growth in osmotic medium —> 89 89(88). a D-Gluconate is assimilated P. amethionina var. amethionina: b D-Gluconate is not assimilated -^ 90 90(89). a D-Xylose is assimilated P. heedii: b D-Xylose is not assimilated P. deserticola:

279

p. 323 p. 292 p. 285 p. 291 p. 302 p. 295 p. 283 p. 291 p. 282 p. 295 p. 349

p. 301 p. 325 p. 292 p. 338 p. 315 p. 309

p. 334 p. 337 p. 290 p. 297 p. 335 p. 338 p. 288 p. 330 p. 346 p. 306 p. 284 p. 328 p. 294 p. 336 p. 326 p. 284 p. 310 p. 300

Table 35 Key characters of Pichia species that do not assimilate hexadecane, methanol, raffinose or N-aCetyl-D-glUCOSamine Species

Ferment. a,b

G

Su

Assimilation a,b Ga

L-Sor

Su

Ce

Mz

St

D-Xy

L-Ar

D-Ar

L-Rh

Other D-Gm D-GcI

Sa

D-Gh

Cit

+

Pichia alni

+

+

+

I? americana

+

+

X

+

I? amethionina var. amethionina

-

V

+

-

I? amethionina var. pachycereana

-

-

+

-

I? amylophila

+

+

+

+

I? antillensis

-

-

-

+

I? besseyi

-

-

-

-

I? bimundalis

+

I? bispora

+

+ +

+ +

I? bovis

+

+

+ + +

I? cactophila

-

X

-

I? canadensis

+

+

+

+ +

I? caribaea

-

V

+

-

I? chambardii

+

-

I? deserticola

-

-

I? dryadoides

I? euphorbiiphila

+ + +

+ +

+

+ + +

I? flwuum

-

-

-

-

I? hampshirensis

+

+

-

-

V

I? japonica

+

I? meyerae

I? mississippiensis

+ +

+ + + +

V

I? heedii

I? nakusei

-

I? norvegensis

I? euphorbiae

V

-

+ +

2-Keto NO,

Vfr

Osm

37"

Gel

TrH

+

W

-

X

X

+

+

+ +

-

V

-

+

-

-

W

I? opuntiae

V

-

-

X

P pijperi

+

+

-

I? populi

+

I

+

V

V

-

continued on next page

Table 35, continued Species

l? pseudocactophila

Ferment. a,b

Assimilation a,b

G

Su

Ga

L-Sor

Su

Ce

Mz

St

0-Xy

L-Ar

o-Ar

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

-

l? quercuum

w

-

I! rhodanensis

t

v

-

-

II sulicuria

-

-

-

-

t

-

+

v

-

-

-

-

?i

siluicolu

l? thermotobruns l? wickerhamii

t

-

-

-

-

+

-

+

t

i

-

+

-

v

+

v

+

-

-

+

t

+

-

+

+

-

-

-

-

i

+

-

-

-

-

+

-

v

-

-

Other

L-Rh D-Gm D-GCI

+ -

+

v +

D-Gk

Cit

-

-

v

+

t

-

2-Keto NO3

Vfr

Osm

37"

Gel

TrH

-

-

-

-

-

+

v

x

-

-

-

-

x

-

+

-

+

v

i

t

-

-

-

-

-

i

+

t

t

t

-

-

-

i

-

t

+

+

-

-

v

-

-

-

-

-

t

-

-

-

x

+

v

v

i

+

-

Sa

-

-

v +

t +

t

v

t

-

-

t

x

-

V

-

v Q

Abbreviations: Ferment., fermentation; G, glucose; Su, sucrose. Assimilation: Ga, galactose; L-Sor, L-sorbose; Su, sucrose; Ce, cellobiose; Mz, melezitose; St, soluble starch; D-XY,D-XyloSe; L-Ar, L-arabinose; D-Ar, D-arabinose; L - R ~L-rhamnose; , D-Gm, D-glucosamine; D-Gcl, D-glucitol; Sa, salicin; D-Gk, o-gluconate; Cit, citrate; 2-Ket0, 2-keto-D-gluconate; NO,, nitrate. Other: Vfr, growth in vitamin-free medium; Osm, growth in osmotic medium (10% sodium chloride + 5% glucose); 37", growth at 37°C; Gel, gelatin liquefaction; TrH, presence of true hyphae. Symbols: +, strong positive; x , weak or strong; w, weak; v, variable; I, latent; -, negative. a

pu

2a6'

r?

n

Vb. Descriptions of teleomorphic ascomycetous genera and species

282

Systematic discussion of the species 42.1. Pichia acaciae van der Walt (1966b)

0

Synonym: Yamadazyma acaciae (van der Walt) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to elongate, (1.5-5.5)x(2.511) [im, and occur singly, in pairs or in small clusters. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows moderately well-developed pseudohyphae but no true hyphae. Aerobic growth is butyrous, dull, grayish-white, and has a somewhat wrinkled surface and a lobed margin. Formation of ascospores: Asci show conjugation between a cell and its bud, or rarely, conjugation between independent cells. Two to four hat-shaped ascospores are produced in each ascus, and they are released soon after formation (Fig. 128). Ascospores were observed on YM and 5% malt extract agars after 5-8 days at 15°C. Fermentation: Glucose Galactose Sucrose Maltose

+ w/-

-

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+

+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

-

+ + + V

-

+/w +

-

+

-

-

+ + + +

-

+ + + +/w V

-

0

i

#

9

m

Fig. 128. P. acaciae, CBS 5656. Ascosporogenous culture after 2 weeks, 15°C, on 5% mak extract agar. Bar = 5 (im.

Origin of the strains studied: Frass of Buprestidae beetle larvae infesting acacia {Acacia nilotica var. kraussiana), South Africa (1); tunnels of the beetle Sinoxylon ruficorne in Combretum apiculatum. South Africa (1). Type strain: CBS 5656 (NRRL Y-7117), from frass of Buprestidae larvae. Comments: Some differences in carbon assimilation for R acaciae were noted among van der Walt's (1966b) original description, ICreger-van Rij's (1970c) study and the present treatment. Consequently, growth on soluble starch and ribitol might be variable rather than positive as given in this study. Additionally, the type strain gave a late, weak reaction on D-xylose rather than a negative reaction as previously reported. P. acaciae is phenotypically quite similar to P. media, and the two differ only because P. media is nonfermentative. 42.2. Pichia alni (Phaff, M.W. Miller i& Miranda) Kurtzman (1984a) Synonym: Hansenula alni Phaff, M.W. Miller & Miranda (1979)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are ovoidal and measure (2.3-4.8) x(2.9-5.7) |im. They occur singly, in pairs, or in small clusters. Growth is butyrous, glistening, and cream-colored to white.

+ +

Growth on the surface of assimilation media: Thin, climbing pellicles are formed.

+

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass is sparse and pseudohyphae are poorly developed. True hyphae are not produced. Aerobic growth is tannish-white, smooth to faintly striated, glistening and with a slightly depressed center. Colony margins are entire to broadly lobed. A faint acidic odor is present.

-

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC 10% NaCl/5% glucose + Co-Q: 9, CBS 5656 (Billon-Grand 1989). Mol% G + C: 46.0 (J.B. Fiol, cited by Billon-Grand 1981).

®

m

w/+

Formation of ascospores: This species is heterothallic and has been isolated from nature only in the haploid state. Ascospores develop in diploid cells resulting from

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

» :

9

bvs©-

••

Fig. 129. /? «/«/, CBS 6986 X CBS 6987. Ascosporogenous culture after 10 days, 25°C, on 5% malt extract agar. Bar =5 |im.

conjugation between complementary mating types. Infrequently, the zygote itself will serve as the ascus. There are two to four hat-shaped ascospores per ascus, and asci are deliquescent (Fig. 129). Ascospores were observed on 5% malt extract agar after 5-7 days at 25°C. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

283

Type strain: CBS 6986 (UCD-FST 68-928A, NRRL Y-11625), isolated by Phaff et al. (1979) from flux of A. rubra, British Columbia, Canada. Comments: Phaff et al. (1979) reported limited conjugation between the mating types of P. alni and P. canadensis {Hansenula wingei), but ascospores were not formed. In an accompanying study, Fuson et al. (1979) showed the two species to exhibit only 6% nDNA base sequence complementarity, thus confirming them as separate taxa. All isolates of P alni have been from deciduous trees, whereas P canadensis occurs exclusively on coniferous trees. Nonetheless, it appears that the two species have recently evolved from a common ancestor. Minor differences in carbon assimilation were noted between the original description and the present study. Phaff et al. (1979) reported weak growth on soluble starch and no growth on ribitol. In the present study, none of the strains grew on soluble starch, and one of the strains (NRRL Y-11626) gave a strong but latent reaction on ribitol. 42.3. Pichia americana (Wickerham) Kurtzman (1984a) Synonyms: Hansenula bimundalis Wickerham & Santa Maria var. americana Wickerham (1965b) Hansenula americana (Wickerham) Kurtzman (1984b) Candida bimundalis Wickerham & Santa Maria var. americana Wickerham (1965b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.8-4.0)x( 1.94.2) |im, and single or in pairs. Growth is butyrous and + light cream colored. + Growth on the surface of assimilation media: Only + + + occasional strains form pellicles. + Dalmau plate culture on morphology agar: After + 7 days at 25°C, growth under the coverglass shows abun+ + + dant and moderately well differentiated pseudohyphae as well as true hyphae. Aerobic growth is white to w/tannish-white, butyrous, and glistening or dull. Hyphae or + + pseudohyphae may be found along the edges of colonies. An ester-like odor is produced. Additional assimilation tests and other growth Formation of ascospores: This species is heterothallic characteristics: and only haploid strains have been isolated from nature. 2-Keto-D-gluconate Starch formation Following conjugation between complementary mating Gelatin liquefaction 5 -Keto-D-gluconate Saccharate Growth at 37T types, zygotes usually serve as asci, although occasional 10% NaCl/5% glucose w/diploid cells bud from the zygote and become asci. The Co-Q: 7, CBS 6986 (Y. Yamada and H.J. Phaff', personal ascospores are hat-shaped and there are usually four per communication). ascus. Asci are deliquescent. Mol%G + C: 41.8^2.0, CBS 6986 and 2 additional strains (BD: Phaff Ascospores were observed on 5% malt extract agar after et al. 1979). 5-20 days at 25°C, following pairing of complementary Origin of the strains studied: Flux from alder {Alnus mating types. rubra Bongard), British Columbia, Canada (2); flux from Fermentation: A. rubra, Washington, U.S.A. (1). Glucose +/w Lactose Complementary mating types: NRRL Y-11625 Galactose Raffinose (CBS 6986, type strain) and NRRL Y-11626 (CBS Sucrose Trehalose 6987). Maltose -

V

Vb. Descriptions of teleomorphic ascomycetous genera and species

284

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

crosses provided evidence for elevation of P. bimundalis var. americana to species status.

42.4. Pichia amethionina Starmer, Phaff, Miranda & M.W. Miller (1978b) This species has two varieties: Pichia amethionina Starmer, Phaff, Miranda & + M.W. Miller var. amethionina (1978b) + +/w Pichia amethionina var. pachycereana Starmer, Phaff, + + Miranda & M.W. Miller (1978b) +/w Growth on 5% malt extract agar: After 3 days at 25°C, + + + the cells are ovoidal to elongate, (1.2^.0)x(3.0-9.0)^m, + and occur singly, in pairs, in short branched chains and in stellate clusters. Growth is butyrous and tannish-white in color. + + Growth on the surface of assimilation media: Pellicles are not formed. Additional assimilation tests and other growth Dalmau plate culture on morphology agar: After characteristics: 2-Keto-D-gluconate w/Starch formation 7 days at 25^C, growth under the coverglass shows no 5-Keto-D-gluconate Gelatin liquefaction true hyphae and only a few rudimentary pseudohyphae. Saccharate Growth at 2>TC Aerobic growth is white in color, smooth, glistening, and 10% NaCl/5% glucose butyrous with an irregular and finely serrate margin. Co=Q: 7, CBS 5644 (Yamada et al. 1973a). Mol% G + C: 42.9, 43.6, 44.0, CBS 5644 {T^: Nakase and Komagata Formation of ascospores: This species is heterothallic 1971b; BD: Fuson et al. 1979; BD: Kurtzman 1984b); 43.2, NRRL and asci are either unconjugated if formed by diploid YB-2444 (BD: Kurtzman 1984b). cells or conjugated when produced by the pairing of Origin of the strains studied: Frass from a Jeffrey pine complementary mating types. Each ascus contains one to {Pinus jeffreyi Grev. & Balf), California, U.S.A. (3); frass four hat-shaped ascospores which are readily released at from a ponderosa pine {Pinus ponderosa Laws.), New maturity. Ascospores were observed on 5% malt extract agar after Mexico, U.S.A. (2). Complementary mating types: NRRL Y-2156 (CBS 3-4 days at 25T. 5644) and NRRL Y-2157 (CBS 5645). Fermentation: absent. Type strain: CBS 5644 (NRRL Y-2156), one of the Assimilation: strains from frass from Jeffrey pine, California, U.S.A. Glucose + /^-Acetyl-D-glucosamine Methanol Comments: In 1965, Wickerham (1965b) described the Galactose L-Sorbose Ethanol + species Hansenula bimundalis and the variety americana. Sucrose + Glycerol Strains of H. bimundalis var. bimundalis are associated Maltose Erythritol Ribitol with coniferous trees of Europe and Asia, whereas Cellobiose Galactitol strains of H. bimundalis var. americana are found with Trehalose D-Mannitol Lactose coniferous trees of southwestern United States. The Melibiose D-Glucitol variety bimundalis assimilates D-arabinose and grows at Raffinose a-Methyl-D-glucoside 37°C, but the variety americana does not. Wickerham also Melezitose Salicin D-Gluconate + noted that hyphae of the variety bimundalis are about Inulin DL-Lactate + twice as long as hyphae of the variety americana. In Soluble starch D-Xylose V Succinate + mating studies, zygotes formed from intervarietal crosses, L-Arabinose Citrate but ascospores were never produced. D-Arabinose Inositol Fuson et al. (1979) examined the nDNA of certain tree- D-Ribose Hexadecane Nitrate inhabiting species of Hansenula (=Pichia) and noted that L-Rhamnose Vitamin-free the G + C content of H. bimundalis var. americana was D-Glucosamine 2.5% higher than that of H. bimundalis var. bimundalis. Additional assimilation tests and other g\Y0^ On the basis of previous experience, this was highly characteristics: V Starch formation suggestive that the varieties represented distinct species. 2-Keto-D-gluconate 5-Keto-D-gluconate Gelatin liquefaction Kurtzman (1984b) demonstrated by nDNA reassociation Saccharate Growth at 37°C + studies that the two varieties showed only 21% base 10% NaCl/5% glucose sequence complementarity. This relatively low nDNA Co-Q: 7, CBS 6940 (Billon-Grand 1985). relatedness coupled with the infertility of intervarietal Mol% G + C: 33.0-33.1, CBS 6940 and 5 additional strains of the + + + +

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman variety amethionina; 32.8-33.5, CBS 6943 and 3 additional strains of the v2ixiQty pachycereana (BD: Starmer et al. 1978b).

285

this species to be heterothallic although most of the ascospores from the parent strain are diploid. Asci from pairing of the mating types predominantly form three or four ascospores. Ascospores were observed on 5% malt extract and YM agars after 2-4 days at 25T.

Supplementary description of R amethionina var. pachycereana: The variety pachycereana assimilates D-mannitol, but does not assimilate D-xylose, thereby providing a means to separate it from the variety amethionina. Fermentation: + Lactose Origin of the strains belonging to the variety Glucose Raffinose amethionina: From cina cactus (Rathbunia alamosen- Galactose Trehalose sis) (1) and agria cactus {Macherocereus gummosus) (2), Sucrose Maltose Mexico. Complementary mating types: NRRL Y-10979 Assimilation: + iV-Acetyl-D-glucosamine (CBS 6942) and NRRL Y-10980 (CBS 6941), derived Glucose Galactose Methanol from the type strain by Starmer et al. (1978b). L-Sorbose Ethanol + Type strain: CBS 6940 (NRRL Y-10978). Sucrose Glycerol + + Erythritol + Origin of the strains belonging to the variety pachy- Maltose + Ribitol cereana: From cardon cactus {Pachycereus pringlei) (2) Cellobiose + Trehalose Galactitol and agria cactus {Macherocereus gummosus) (1), Mex- Lactose D-Mannitol + ico. Melibiose D-Glucitol + Complementary mating types: NRRL Y-10982 Raffinose a-Methyl-D-glucoside + + Salicin (CBS 6945) and NRRL Y-10983 (CBS 6944), derived Melezitose Inulin + D-Gluconate from the type strain by Starmer et al. (1978b). Soluble starch + DL-Lactate + Type strain: CBS 6943 (NRRL Y-10981). + D-Xylose Succinate + Citrate + + Comments: Starmer et al. (1978b, 1979) observed no L-Arabinose Inositol mating between P. amethionina and P. delftensis, P. heediiD-Arabinose Hexadecane or P. opuntiae despite their phenotypic similarity, and D-Ribose L-Rhamnose Nitrate it appears that these species are biologically distinct. D-Glucosamine Vitamin-free P. amethionina and P. caribaea seem unique among the yeasts because all strains require an exogenous source Additional assimilation tests and other growth of methionine or cysteine (Starmer et al. 1978b, Phaff characteristics: Starch formation et al. 1992). Shen and Lachance (1993) have compiled 2-Keto-D-gluconate 5-Keto-D-gluconate Gelatin liquefaction the published data on extent of nDNA complementarity Saccharate Growth at 37T + among closely related cactus yeasts. 10% NaCl/5% glucose 42.5. Pichia amylophila Kurtzman, Smiley, Johnson, Wickerham & Fuson (1980a) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are single, or rarely, clustered, and spheroidal, ellipsoidal, or elongate, (2.0-5.5)x(3.0-14.0) fim. Growth is butyrous and tannish-white in color. Grow^th on the surface of assimilation media: Pellicles are not formed but rings develop occasionally. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and highly branched pseudohyphae as well as occasional true hyphae. The true hyphae show no evidence of a dolipore septum when viewed under the light microscope. Aerobic growth is cream colored, dull, and moist with a serrate margin and a slightly raised center. A faint, ester-like odor is produced. Formation of ascospores: Diploid cells convert to asci and usually form two hat-shaped ascospores. Asci are generally free but may form on pseudohyphae where they are sessile or attached by short sterigmata. At maturity, the asci become deliquescent. Single-spore isolations showed

Co-Q: 7, CBS 7020 (Billon-Grand 1985). Mol% G + C: 45.4, CBS 7020 (BD: Kurtzman et al. 1980a).

Origin of the strain studied: Frass from loblolly pine (Pinus taeda L.) Mississippi, U.S.A. Complementary mating types: NRRL YB-128782-2 (CBS 7021) and NRRL YB-1287-82-3 (CBS 7022), derived as single-ascospore isolates from the type strain. Type strain: CBS 7020 (NRRL YB-1287). Comments: P amylophila is phenotypically quite like P mississippiensis and differs from the latter only in its ability to assimilate soluble starch. Complementary mating types from the two species conjugate but the resulting ascospores are infertile. In a comparison of nDNA relatedness, the two taxa showed only 25% base sequence complementarity (Kurtzman et al. 1980a), but this is still higher than the 0-15% commonly found between more distantly related species. Thus, the data show that these two species have recently evolved from a common ancestor. P. amylophila and P mississippiensis are similar to P rhodanensis, P wickerhamii and P veronae, which are also heterothallic, but Kurtzman et al. (1980a) found that they gave no mating reactions

286

Vb. Descriptions of teleomorphic ascomycetous genera and species

with these latter three taxa nor did they show significant nDNA relatedness with them.

Additional assimilation tests and other growth characteristics:

42.6. Pichia angophorae M.W. Miller & Barker (1968)

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 33.0 (J.B. Fiol, cited

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.0-6.0)x(3.07.0) |xm, and occur singly, in pairs or in short chains. Growth is butyrous and light tan in color. Growth on the surface of assimilation media: Thin pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25'^C, growth under the coverglass shows well-developed pseudohyphae bearing blastoconidia. True hyphae are not formed. Aerobic growth is light tan in color, moderately glistening, butyrous, and with entire margins. Formation of ascospores: Miller and Barker (1968) reported ascus development in their original isolates to be preceded by iso- or heterogamic conjugations, or rarely by no conjugation. Two to four hat-shaped ascospores are formed in each ascus. Asci are deliquescent. Singlespore isolates yielded both sporogenous and asporogenous cultures and the species was described as both homo- and heterothallic (Miller and Barker 1968). The occurrence of haploid as well as diploid spores could account for these observations. The type strain, NRRL Y-7118 (CBS 5823), is now asporogenous, but conjugates and sporulates when paired with mating type NRRL Y-7843. Ascospores were observed on 5% malt extract agar after 1-3 days at 25°C, following pairing of complementary mating types. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + +

-

+ + + +

-

+

-

+ +

-

+

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+

-

+

-

+ + + +/w

-

+ +/w

-

Starch formation Gelatin liquefaction Growth at 2)TC

-

by Billon-Grand 1981).

Origin of the strains studied: Gum exudate of a red gum tree (Angophom costata), Australia (1); mating types derived from the type strain, Kreger-van Rij. Complementary mating types: NRRL Y-7843 (CBS 5823) and NRRL Y-7844 (CBS 5830), derived from the type strain. Type strain: CBS 5823 (NRRL Y-7118), from Angophom costata. Comments: P. angophorae is phenotypically similar to P spartinae but differs from the latter by its growth on D-xylose and lack of growth on hexadecane, L-sorbose and at 37°C. No response was noted in mixtures of mating types from the two species (Kurtzman and Ahearn 1976). 42.7. Pichia angusta (Teunisson, Hall & Wickerham) Kurtzman (1984a) Synonyms: Hansenula angusta Wickerham (1951) nom. nud. Hansenula angusta Teunisson, Hall & Wickerham (1960) Hansenula polymorpha Falcao de Morais & Dalia Maia (1959) Ogataea polymorpha (Falcao de Morais & Dalia Maia) Y. Yamada, Maeda & Mikata (1994c) Torulopsis methanothermo Urakami (1975) nom. nud.

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to elongate, (1.5-4.6) x( 1.95.3) [Am, and single, in pairs, or in small clusters. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Very thin pellicles are occasionally produced. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither hyphae nor pseudohyphae are detected under the coverglass. Aerobic growth is white to slightly tannish-white, smooth tofinelystriated, glistening, and butyrous. Colony margins are entire or finely lobed. Formation of ascospores: Asci are unconjugated, or exhibit conjugation between parent and bud, or lessfi*equentlybetween independent cells. One to four hemispheroidal or narrow brimmed hat-shaped ascospores are formed per ascus. The asci are deliquescent. Singlespore isolates from four-spored asci from the type strain gave sporogenous colonies, and the species is presumed homothallic (Kurtzman, unpublished). Ascospores were observed on 5% malt extract, YM, and McClary's acetate agars after 4-7 days at 25'^C. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

+

42. Pichia E.G. Hansen emend. Kurtzman / C.P. Kurtzman

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w/V

+ + V

+

-

+

-

V V V

+ V

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ + + + + V

+ + + V V

V V

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction v Saccharate Growth at 37°C + 10% NaCl/5% glucose + Co-Q: 7, CBS 7073 and 3 additional strains (Yamada et al. 1973a). Mol% G + C: 47.8-48.3, CBS 7073 and 3 additional strains {T^\ Nakase and Komagata 1971b); 48.0, CBS 4732 (BD: Kurtzman, unpublished).

Origin of the strains studied: Soil (1); concentrated orange juice (1); Drosophila spp. (5); intestinal tract of swine (1); 'alpechin' (1); insect frass from various deciduous trees and nuts (19). Type strain: CBS 7073 (NRRL Y-2214), isolated from the fruit fly Drosophila pseudoobscura in California, U.S.A. (Shehata et al. 1955), and selected by Teunisson et al. (1960) as the type strain of Hansenula angusta. Comments: With the transfer of Hansenula species with hat-shaped ascospores to Pichia (Kurtzman 1984a), several nomenclatural difficulties arose. One of these concerned Hansenula polymorpha because of prior usage of the combination Pichia polymorpha. Because of the unavailability of the name polymorpha, Pichia angusta was selected for the new combination because H angusta is an obligate synonym of H. polymorpha. Phaff (1985) reported P. angusta to be common in rotting opuntia cacti. The cactus isolates show G + C contents about 1 mol% higher than non-cactus strains but reduced (ca. 65-70%) nDNA complementarity with these strains. The cactus isolates differ phenotypically by slow, weak growth on methanol but grow at elevated temperatures (45'*^6°C). 42.8. Pichia anomala (E.C. Hansen) Kurtzman (1984a) Anamorph: Candida pelliculosa Redaelli Synonyms: Saccharomyces anomalus E.C. Hansen (1891) Willia anomala E.C. Hansen (1904) Hansenula anomala (E.C. Hansen) H. & P. Sydow (1919) Endomyces anomalus (E.C. Hansen) Zender (1925b)

287

Saccharomyces sphaericus von Nageli (1879) Hansenula sphaerica (von Nageli) H. & P. Sydow (1919) Hansenula anomala (E.C. Hansen) H. & P. Sydow var. sphaerica (von Nageli) Dekker (Stelling-Dekker 1931) Saccharomyces acetaethylicus Beijerinck (1892) Monilia javanica Went & Prinsen Geerligs (1894) Willia javanica Groenewege (1921a) Hansenula javanica (Groenewege) Dekker (Stelling-Dekker 1931) Endoblastoderma puluerulentum Fischer & Brebeck (1894) Mycoderma cereuisiae Desmazieres var. puluerulentum Beijerinck (cited in Barnett et al. 1990) Mycoderma pulverulenta (Beijerinck) Nannizzi (1934) Willia Odessa Weber (1922) Endomyces odessa (Weber) Zender (1925b) Hansenula odessa (Weber) Dekker (Stelling-Dekker 1931) Willia schneggii Weber (1922) Endomyces schneggii (Weber) Zender (1925b) Hansenula schneggii (Weber) Dekker (Stelling-Dekker 1931) Hansenula anomala (E.C. Hansen) H. & P Sydow var. schneggii (Weber) Wickerham (1970a) Willia productiua Berkhout (1923) Hansenula productiva Beijerinck ex Dekker (Stelling-Dekker 1931) Hansenula anomala (E.C. Hansen) H. & P. Sydow var. productiva Dekker (Stelling-Dekker 1931) Monilia productiva nom. nud. (cited by Wickerham 1970a) Endomyces margaritae Zender (1925a) Willia margaritae (Zender) Guilliermond (1928) Candida pelliculosa Redaelli (1925) Mycocandida pelliculosa (Redaelli) Guerra (1935) Candida javanica (Went & Prinsen Geerligs) Berkhout (1923) Willia bispora Mattlet (1926) Hansenula bispora (Mattlet) Nannizzi (1934) Hansenula anomala (E.C. Hansen) H. & P. Sydow var. longa Dekker (Stelling-Dekker 1931) Hansenula anomala (E.C. Hansen) H. & P. Sydow var. robusta Dekker (Stelling-Dekker 1931) Hansenula nivea CastelH (1933) Hansenula panis CastelH (1933) Saccharomyces aceris-sacchari Fabian & Hall (1933) Hansenula anomala (E.C. Hansen) H. & P. Sydow var. heteromorpha Bedford (1942) nom. nud. Hansenula miso (and forms a, (3, (3 var. 1) Mogi (1942) nom. nud. Hansenula octospora Mogi (1942) nom, nud. Hansenula miso var. octosporus S. Goto & Yokotsuka (1962b) nom. nud. Candida pelliculosa Redaelli var. cylindrica Diddens & Lodder (1942) Candida beverwijkii Novak & Vitez (1964) Hansenula ukrainica Kvasnikov, Nagomaya & Shchelokova (1979b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to elongate, (1.9-4.1)x(2.16.1) [i-m, and occur singly, in pairs, or in small clusters. Growth is butyrous and faintly tan in color. Growth on the surface of assimilation media: Pellicles are produced by some strains and when present vary from thin and smooth to thick and folded. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass may show abundant, branched pseudohyphae, although some strains form no pseudohyphae. None of the isolates form true hyphae. Aerobic growth is white to tannish-white and generally butyrous. Some strains are smooth and glistening while others are dull and somewhat chalky. Colony margins range from entire to lobed and occasionally show

Vb. Descriptions of teleomorphic ascomycetous genera and species

288

a fringe of pseudohyphae. The cultures usually produce a faintly pleasant odor. Formation of ascospores: R anomala is heterothallic, but the sporogenous diploid form is usually isolated from nature. Diploid cells directly convert to asci and form one to four hat-shaped ascospores (Fig. 130). Asci are deliquescent. Ascospores were observed on 5% malt extract agar, V8 agar, and sterilized carrot slices after 3-10 days at 25°C.

w •

%.&

0

m< fm Fig. 130. P. anomala, CBS 5759. Ascosporogenous culture after 3 days, 25°C, on 5% malt extract agar. Bar = 5 ^im.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+

Lactose Raffinose Trehalose

-

w/-

-

V

+ V

-

+ + + +

-

+ +

-

+

V V

V

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

and Komagata 1971b); 36.8, CBS 605 (T^: Stenderup and Bak 1968); 35.8-37.4, CBS 5759 and 5 additional strains (BD: Kurtzman 1984b).

Origin of the strains studied: Contaminants fi-om industrial or pilot plant fermentations (12); ragi, Java (10); soil (9); gums of trees, principally Prunus (9); stored grain (6); ensilage (4); lakes or streams (3); warm-blooded animals (3); tree exudates (2); frass (2); fermenting mushrooms (2); sewage (2); fruit (1); from various collections and investigators (58). Complementary mating types: NRRL Y-366-8 (CBS 1984) and NRRL Y-2153-4 (CBS 1982). Type strain: CBS 5759 (NRRL Y-366), received from Fabian, U.S.A., as Willia anomala Saito. Comments: Wickerham (1970a) separated Hansenula anomala var. schneggii from H. anomala var. anomala because the former is less capable of fermenting sucrose than the latter, and it does not grow in osmotic medium. Additionally, the variety schneggii does not assimilate raffinose. Perhaps even more striking, the variety schneggii produces cylindrical and often markedly elongated threadlike cells while the variety anomala does not. However, sexual reactions tend to obscure the other differences between the varieties. Reactions between strains of the variety schneggii are weak, but mixtures that contain one strain of each variety are stronger. Kurtzman (1984b) compared H. anomala var. anomala and H. anomala var. schneggii from extent of nDNA reannealing. The two varieties showed 94% base sequence complementarity. Consequently, in view of the great similarity of these strains at the molecular level, the varietal designations have not been maintained. In other nDNA comparisons, Hansenula ukrainica was shown to be a synonym of P. anomala (Kurtzman 1992b).

-

-

+ + + V

-

+ + + + V

+ + +

-

+ +

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate Starch formation 5 -Keto-D-gluconate Gelatin liquefaction V Saccharate Growth at 37T 10% NaCl/5% glucose V Co-Q: 7, CBS 5759, and 5 additional strains (Yamada et al. 1973a). Mol% G + C: 35.9-36.6, CBS 5759, AJ 4160, AJ 4167 (7'm! Nakase

42.9. Pichia antillensis Starmer, Phaff, Tredick, Miranda & Aberdeen (1984) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal, or ellipsoidal to short elongate, (1.5^.1)x(2.1-7.1)^m, and occur singly, in pairs, or infrequently, in small clusters. Growth is butyrous and light tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass is devoid of hyphae or pseudohyphae, but small outgrowths of undifferentiated cells may form. Aerobic growth is white, glistening, and butyrous with a depressed center and an irregularly lobed margin. A faint musky, acidic odor is present. Formation of ascospores: This species is heterothallic and is often isolated from nature in the asporogenous haploid state, although diploids are occasionally found. Asci form from naturally occurring diploid cells or those arising following conjugation of complementary mating

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

types. Asci generally contain four hat-shaped ascospores that are released soon after formation. Ascospores were observed on YM agar after 5 days at 25T. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

s

V

-

+ + +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5 -Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37T 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 33.4-33.7, CBS 7111 and 5 additional strains (BD: Starmer et al. 1984).

Origin of the strains studied: Necrotic tissue of the columnar cactus Cephalocereus royenii from the Virgin Islands: Prickly Pear Island, Virgin Gorda (CBS 7111, CBS 7113); Beef Island, Tortola (CBS 7112). Complementary mating types: CBS 7112 (NRRL Y-12882) and CBS 7113 (NRRL Y-12883), isolated by Starmer et al. (1984). Type strain: CBS 7111 (NRRL Y-12881).

289

42.10. Pichia barkeri Phaff, Starmer, Tredick-Kline & Aberdeen (1987a) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal, ellipsoidal to elongate, (2.0-6.0)x(2.5-10.0)[im, and occur singly, in pairs and in small clusters. Growth is butyrous, dull-glistening and tannish-white. Growth on the surface of assimilation media: Moderate, climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant well-branched pseudohyphae with blastoconidia, but no true hyphae. Aerobic growth is a faint yellowtan in color, butyrous with a dull, roughened surface, and irregularly lobed margins. A faint acidic odor is present. Formation of ascospores: Ascosporulation begins with the development of a protuberance on a vegetative cell. The terminal end of the protuberance swells and seems to serve as a conjugating cell. Up to four hat-shaped ascospores form in one of the cells, usually the parent cell. Asci become deliquescent soon after spore formation. On the basis of this life cycle, Phaff et al. (1987a) proposed that R barkeri appears to be homothallic. Ascospores were observed on McClary's acetate agar after 5-10 days at 25°C. Fermentation: Glucose + Lactose Galactose Raffinose Sucrose Trehalose Maltose Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s

-

+ +

-

Comments: Starmer et al. (1984) noted that R antillensis + shares many physiological and ecological similarities with V + P. heedii, R amethionina, R opuntiae and R thermotolerans, all of which are heterothallic. Comparisons of nDNA complementarity showed R antillensis to have, respectively, about 50% and 28% relatedness with + R opuntiae and R thermotolerans, but because no conjugation was detected between mating types of the Additional assimilation tests and other growth taxa, they are considered separate biological species. characteristics: Starch formation At present, R opuntiae is known only from Australia, 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate R thermotolerans from Mexico, and R antillensis from Saccharate Growth at 37°C + the West Indies. Results of the present comparison are 10% NaCl/5% glucose + in good agreement with the original description except Co-Q: 7 (Y. Yamada and H.J. Phaff, personal communication). that one strain (CBS 7113) showed a delayed growth Mol% G + C: 35.7-36.6, CBS 7256 and 21 additional strains (BD: Phaff reaction on salicin rather than being unable to assimilate et al. 1987a). this compound. Origin of the strains studied: Rotting cladodes of

290

Vb. Descriptions of teleomorphic ascomycetous genera and species

prickly pear cactus (Opuntia stricta) from Discovery Bay, Jamaica (CBS 7256), and Cayman Brae, Caribbean Sea (CBS 7257). Type strain: CBS 7256 (NRRL Y-17350).

¥5

Comments: The work of Phaff et al. (1987a) shows the habitat of P. barkeri to be restricted to rotting cladodes of Opuntia stricta. Further, P. barkeri has been isolated only from O. stricta growing on several islands of the Caribbean Sea and from a small area in New South Wales, Australia. P barkeri is phenotypically quite similar to P kluyveri var. kluyveri although the two can be separated because P barkeri is characterized by the production of lipase. Additionally, P kluyveri var. kluyveri shows killer activity against Candida glabrata whereas P barkeri does Fig. \3\. P. besseyi, CBS 6343. Ascosporogenous not (Phaff et al. 1987a). The two taxa show about 20% 25''C, on 5% malt extract agar. Bar = 5 ^m. nDNA complementarity, suggesting that their divergence as separate species has been relatively recent (Phaff Fermentation: + Glucose Lactose et al. 1987a): the G + C content of i? barkeri is 6mol% Galactose Raffinose higher than that of P kluyveri. In contrast to the original Sucrose Trehalose description, citrate assimilation was not detected in the Maltose present study. Assimilation: 42.11. Pichia hesseyi Kurtzman & Wickerham (1972) Synonym: Yamadazyma besseyi (Kurtzman & Wickerham) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (4.3-7.0) x (4.38.2) ^m, and occur singly or occasionally in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Thin pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither pseudohyphae nor true hyphae, but "tree-like" outgrowths of elongated cells are detected on corn meal agar after 2 weeks. Aerobic growth is dull-glistening and butyrous with an entire margin. The colony color is initially white to cream but becomes pink to brown as ascospores are formed. Formation of ascospores: Occasionally, asci are formed following conjugation between independent cells, but the majority are unconjugated. Asci usually contain four spores and become deliquescent upon maturity. The shape of ascospores is generally hemispheroidal; for most spores, the underside appears concave and the lower periphery is somewhat thickened, but some spores seem to have a flattened, saturn-like appearance (Fig. 131). Singlespore isolates from four-spored asci are sporogenous and the species is presumed to be homothallic. Ascospores were observed on 5% malt extract, morphology and YM agars after 1 week at 25''C.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

culture after 3 days,

A/^-Acetyl-D-glucosamine

-

Methanol + Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside Salicin D-Gluconate + DL-Lactate Succinate + Citrate Inositol Hexadecane Nitrate Vitamin-free Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction + Saccharate Growth at 37T 10% NaCl/5% glucose Co-Q: 7, CBS 6343 [Yamada, pers . comm.; the determination of Co-Q 9 by Billon-Grand (1985) appears incorrect]. Mol% G + C: 35.1, 35.2, CBS 6343 1 (T^: Billon-Grand 1981; BD: Kurtzman, unpublished).

Origin of the strain studied: Shallow water in a marsh near Bonaventure, Gaspe Peninsula, Quebec, Canada (1). Type strain: CBS 6343 (NRRL YB-4711). Comments: P. besseyi assimilates only a limited number of carbon compounds making it phenotypically similar to P. membranifaciens. However, it assimilates mannitol and glucitol, compounds on which P. membranifaciens is incapable of growth. Likewise, P. besseyi assimilates lactic acid, but not ribitol and may be distinguished

42. Pichia E. C. Hansen emend. Kurtzman / C.P. Kurtzman

291

from P. delftensis by these characters. rRNA comparisons Additional assimilation tests and other growth place P. besseyi in the Saturnispora clade (Kurtzman and characteristics: 2-Keto-D-gluconate w/Starch formation Robnett, manuscript in preparation). 42.12. Pichia bimundalis (Wickerham & Santa Maria) Kurtzman (1984a) Synonyms: Hansenula bimundalis Wickerham & Santa Maria (Wickerham 1965b) Candida bimundalis Wickerham & Santa Maria var. bimundalis (Wickerham 1965b)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ellipsoidal, (1.8^.3) x (2.05.2) [im, and single or in pairs. Growth is butyrous and light cream colored. Growth on the surface of assimilation media: Usually pellicles are not formed, but occasional strains give waxy climbing pellicles. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass consists of abundant and moderately well differentiated pseudohyphae. True hyphae are also present. Aerobic growth is white to tannish-white, butyrous, and glistening or mat rugose. Colonies may be fringed with hyphae or pseudohyphae. An ester-like odor is produced. Formation of ascospores: This species is heterothallic and only haploid strains have been isolated from nature. Following conjugation between complementary mating types, zygotes may serve as asci or diploid cells arising from the zygotes become asci. The ascospores are hatshaped with prominent brims and there are usually four per ascus. Asci are deliquescent. Ascospores were observed on 5% malt extract agar after 3-10 days at 25''C, following pairing of complementary mating types. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s -

Lactose Raffinose Trehalose

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ + + +

-

+

-

+ V

+

-

+

-

+ +

-

+ +

V

+ + + + +

-

+

-

5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC + 10% NaCl/5% glucose Co-Q: 7, CBS 5642 (Yamada et al. 1973a). Mol% G + C: 40.1, 41.1, CBS 5642 {T^\ Nakase and Komagata 1971b; BD: Fuson et al. 1979); 41.5, 42.1, NRRL YB-2805, CBS 5642 (BD: Kurtzman 1984b).

Origin of the strains studied: Larvae of the beetle Ergatesfaber and larvae of three other beetle genera living principally in stumps of Scotch pine (Pinus sylvestris Linn.), Spain (8); frass of a fir tree {Abies firma Sieb. & Zucc), Japan (1). Complementary mating types: NRRL Y-5343 (CBS 5642) and NRRL Y-5354 (CBS 5643). Type strain: CBS 5642 (NRRL Y-5343), isolated from a larva of Ergates faber (Wickerham 1965b). Comments: The close relationship bQtwQQn P. bimundalis and P. americana is discussed in the treatment of the latter species. 42.13. Pichia bispora (Wickerham) Kurtzman (1984a) Synonyms: Endomyces bisporus Beck (1922) Endomycopsis bispora (Beck) Dekker (Stelling-Dekker 1931) Hansenula beckii Wickerham (1951)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to elongate and measure (1.75.8)x(2.8-11.3)|im. They occur singly, in pairs, or in small clusters. Growth is light tan in color, and, depending upon the isolate, is either butyrous or mycelial. Growth on the surface of assimilation media: Pellicles or rings are not formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows abundant and well-branched pseudohyphae as well as true hyphae. Aerobic growth is light tan in color and may be butyrous or mycelial. Colony margins are entire or finely lobed. A faint ester-like odor is present. Formation of ascospores: Beck (1922) reported the asci to be free cells in which two hat-shaped spores were formed. Subsequent investigators found Beck's strain (CBS 1890) to be asporogenous (Kreger-van Rij 1970c), but her original description leaves no doubt about the presence of ascospores. An additional strain (CBS 6468, NRRL Y-11610) of /? bispora became available, and this culture formed two to four hat-shaped spores per ascus. Asci are single, unconjugated cells which become deliquescent upon maturation of the ascospores (Fig. 132). Colonies of single-spore isolates from four-spored asci proved sporogenous and the species is presumed to be homothallic (Kurtzman, unpublished).

Vb. Descriptions of teleomorphic ascomycetous genera and species

292

.4° Fig. 132. i? bispora, CBS 6468. Ascosporogenous culture after 3 days, 25°C, on YM agar. Bar = 5 [im.

Ascospores were observed on YM agar after 3-5 days at 25T. Fermentation: Glucose Galactose Sucrose Maltose

w/-

-

Lactose Raffinose Trehalose

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + s

-

+

-

+ w/-

V

+

+ +

V

V

+/w +/w +/w s

to have hyphal septa with a closure line typical of other mycelial Pichia species. In view of this, P bispora has been retained in Pichia. Strain CBS 6468 (NRRL Y-11610) was found to differ from the type strain by giving a weak and late fermentation of glucose and by the inability to assimilate ribitol, mannitol, and lactic acid. In a comparison of their nDNAs, the two strains exhibited 97% base sequence complementarity and represent the same species (Kurtzman, unpublished). Separation of P bispora, P canadensis, P americana and P alni using standard tests is problematical; however, DNA reassociation studies clearly show the species to be genetically isolated (Fuson et al. 1979) despite their many phenotypic similarities. The strong growth shown by P canadensis at 37°C serves to separate it from the other three species, which fail to grow at this temperature. P americana and P bispora form true hyphae whereas P alni does not. Glucose fermentation by P americana is weak or strong and occurs early (1-10 days), in contrast to P bispora which either does not ferment glucose or gives a late (greater than 10 days) and weak fermentation of this sugar. 42.14. Pichia hovis van Uden & do Carmo-Sousa (1957) Synonym: Zymopichia bovis (van Uden & do Carmo-Sousa) Novak & Zsolt (1961).

Growth on 5% malt extract agar: After 3 days at 25T, the cells are spheroidal to ovoidal, (1.9-5.l)x(2.19.2) |im, and occur singly or in pairs. Growth is butyrous and tannish-white in color.

V

+ +

-

+

Additional assimilation tests and other g;rowf characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Growth at 3 7 T Saccharate 10% NaCl/5% glucose

Growth on the surface of assimilation media: Dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth of pseudohyphae under the coverglass may be quite rudimentary or moderately well developed. True hyphae are not formed. Aerobic growth is tannish-white, smooth, faintly glistening, butyrous, and with an entire margin. A faint ester-like odor is present.

Formation of ascospores: Asci are unconjugated and generally contain no more than two spores. The ascospores are hat-shaped and liberated from the asci soon after Origin of the strains studied: Frass from tunnels in formation. Ascospores were observed on 5% malt extract agar after the bark of a spruce {Abies sp.), Beck, Austria (1); human scalp, Laaksonen, Finland (1). 2-3 days at 25T. Type strain: CBS 1890 (NRRL Y-1482), frass from spruce bark. Fermentation: Glucose Lactose + Comments: In their study of septa in ascomycetous Galactose Raffinose yeasts by electron microscopy, Kreger-van Rij and Veen- Sucrose w/Trehalose huis (1973) showed P. bispora {Endomycopsis bispora) Maltose w/Co-Q: 7, CBS 1890 (Yamada et al. 1973a). Mol% G + C: 36.6, 37.1, CBS 1890 {T^: Nakase and Komagata 1971b; BD: Fuson et al. 1979).

42. Pichia B.C. Hansen emend. Kurtzman / C.P. Kurtzman

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + +

-

+

V

+ +

V

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+ + + + + + + +

-

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Growth at 3 7 ^ Saccharate 10% NaCl/5% glucose Co-Q: 7, CBS 2616 (Yamada and Kondo 1972b). Mol% G + C: 39.8, 42.3, CBS 2616 {T^: Nakase and Komagata 1970b; BD: Kurtzman, unpublished).

Origin of the strains studied: Cecum of a cow, van Uden (1); from Santa Maria (1). Type strain: CBS 2616 (NRRL YB-4184), from the cecum of a cow.

25°C, the cells are ovoidal to elongate, (2.3-5.7)x(6.09.0) (im, and occur singly, in pairs and in small clumps. Pseudohyphae and true hyphae may be present. Growth is tannish-yellow in color and may be butyrous to somewhat mycelial. Growth on the surface of assimilation media: Depending upon the strain, pellicles may be thin and incomplete or quite thick. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant pseudohyphae as well as true hyphae. Blastoconidia may be borne on denticles. Denticles occur on blastoconidia as well as on hyphae and pseudohyphae. Arthroconidia are also produced. Aerobic growth is white to tannish-white in color, dull and sometimes powdery, and usually fringed by a broad mycelial band. A faint ester-like odor is present. Formation of ascospores: This species is heterothallic. Asci may form directly from diploid cells or result from the pairing of complementary mating types. Each ascus contains one to four hat-shaped ascospores which are readily released at maturity (Fig. 133). Ascospores were observed on 5% malt extract- and YM agars after 3-5 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Comments: Pichia boois is phenotypically quite similar to P. onychis, but differs from the latter by the inability to Assimilation: Glucose ferment and to assimilate raffinose. Galactose 42.15. Pichia burtonii Boidin, Pignal, Lehodey, Vey & Abadie (1964) Anamorph: Candida uariabilis (Lindner) Berkhout Synonyms: Endomycopsis burtonii (Boidin, Pignal, Lehodey, Vey & Abadie) Kreger-van Rij (1970b) Hyphopichia burtonii (Boidin, Pignal, Lehodey, Vey & Abadie) von Arx& van der Walt (1976) Monilia variabilis Lindner (1898b) Oospora uariabilis (Lindner) Lindau (1907) Candida uariabilis (Lindner) Berkhout (1923) Trichosporon variabile (Lindner) Delitsch (Lembke 1943) Dematium chodati Nechitsch (1904) Cladosporium chodati (Nechitsch) Saccardo (1906) Candida chodati (Nechitsch) Berkhout (1923) Endomycopsis chodati Wickerham & Burton (1952) nom. nud. ISporotrichum carougeaui Langeron (1922) Sporotrichum anglicum Castellani (1937b) Trichosporon behrendii Lodder & Kreger-van Rij (1952) Fermentotrichon behrendii (Lodder & Kreger-van Rij) Novak & Zsolt (1961) Candida armeniaca-cornusmas Sarukhanyan (1957) CandidafibraeNakase (1971a) Cladosporium fermentans S. Goto, Yamakawa & Yokotsuka (1975a)

Growth on 5% malt extract agar: After 3 days at

293

L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w/+ +/w

Lactose Raffinose Trehalose

-

+ +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

V

+ + + +

-

+ V

-

+ + V

-

+

-

+/w

+/w s

-

+ + + +

-

+ + + + V

-

+ +

-

+

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction +/w Saccharate Growth at 2)TC w/10% NaCl/5% glucose + Co-Q: 8, CBS 2352, AJ 4275 (Yamada et al. 1976b). MoI% G + C: 35.6, AJ 4832 {T^: Nakase and Komagata 1971g); 37.3, CBS 2352 (BD: Kurtzman, unpublished).

Vb. Descriptions of teleomorphic ascomycetous genera and species

294

Cephaloascus albidus, Yarrowia lipolytica, P. rhodanensis, P. wickerhamii and the euascomycete Aureobasidium pullulans.

> 1 ^

-

fi ^

diS Fig. 133. P burtonii, CBS 2352xCBS 2353. Ascosporogenous culture after 3 days, 25''C, on 5% malt extract agar. Bar = 5 |im.

Origin of the strains studied: Pollen carried by wild bees in Brazil (1); silage (1); stored rice (6); wheat (2); wheat flour (3); chicken feed (7); fig tree (1); wound on palm tree (1); ragi (1); sputum (1); skin (1); other substrates (6). Complementary mating types: NRRL Y-1933 (CBS 2352) and NRRL Y-1938 (CBS 2353). Type strain: CBS 2352 (NRRL Y-1933), from pollen. Comments: The presence of budding cells and arthroconidia as well as sometimes profuse amounts of true hyphae has prompted the assignment of P. burtonii to various genera. In 1952, Wickerham and Burton discovered the ascosporic stage of this species and showed it to be heterothallic. They described it as Endomycopsis chodati but a Latin diagnosis was not provided. Boidin et al. (1964) validly described the species as P. burtonii and in 1970 Kreger-van Rij (1970b) transferred it to Endomycopsis. In 1971, van der Walt and Scott (1971b) showed Endomycopsis to be an obligate synonym of Saccharomycopsis Schionning and transferred many of the Endomycopsis species to Saccharomycopsis, but not P. burtonii. Later, von Arx and van der Walt (1976) transferred P. burtonii to their newly created genus Hyphopichia. Cardinal features of this new genus included heterothallism, presence of septate hyphae, asci formed from conjugating yeast cells and denticulate conidiogenous cells. These workers excluded P. burtonii from Pichia because it formed expanding septate hyphae and conidia borne on denticles and from Saccharomycopsis because it produced asci comprised of pairs of conjugating cells. In the present treatment, Hyphopichia is not accepted because the phenotypic characters used for its definition do not distinguish it from several other genera. Features such as heterothallism, presence of septate hyphae and formation of asci from conjugating cells are widespread. Further, although the denticulate conidiogenous cells of P. burtonii are quite pronounced, they are not unique to any one taxon and may be found in Stephanoascus ciferrii,

42.16. Pichia cactophila Starmer, Phaff, Miranda & M.W. Miller (1978a) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to elongate, (1.2-5.0)x(2.0-8.l)|im, and occur singly, in pairs and in short chains. Growth is butyrous and cream-colored. Growth on the surface of assimilation media: Thin climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows only rudimentary pseudohyphae and no true hyphae. Aerobic growth is slightly glistening, smooth, butyrous, tannishwhite in color, and with irregular and finely serrate margins. A faint acidic odor is present. Formation of ascospores: This species has been isolated from nature in the diploid form and cells convert directly to asci, producing two hat-shaped ascospores that are liberated at maturity. Colonies derived from single ascospores are ascosporogenous, but because tetrads are not formed, it is not certain whether the species is homothallic or heterothallic. Ascospore formation was observed on YM and 5% malt extract agars after 3-7 days at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

w/-

Lactose Raffinose Trehalose

-

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

-

+/w

-

+

+ +

-

+ +

V

-

295

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

sporogenous colonies. The low frequency of three-spored asci has prevented their analysis for mating types, and it 2-Keto-D-gluconate Starch formation is not certain whether the type strain is homothallic as 5-Keto-D-gluconate Gelatin liquefaction originally described (Wickerham 1951). Saccharate Growth at 37°C + Strains of Hansenula wingei, now considered conspe10% NaCl/5% glucose cific with P canadensis, may be haploid or diploid when Co-Q: 7, CBS 6926 (Billon-Grand 1985). Mol% G + C: 36.0-36.5, CBS 6926 and 2 additional strains (BD: isolated from nature. Asci usually contain four hat-shaped Holzschu et al. 1983). spores and become deliquescent upon maturity. Strains described as H. wingei are heterothallic and it is the Origin of the strains studied: Cacti (Stenocereus spp., first fungus in which sexual agglutination was shown Lemaireocereus pruinosus) from Mexico (3). Type strain: CBS 6926 (UCD-FST 76-243A, NRRL (Wickerham 1956). Ascospores were observed on YM and 5% malt extract Y-10963) from organ pipe cactus {Stenocereus thurberi), agars after 5-10 days at 25°C. Baja California, Mexico. Comments: Results from the present study are in good Fermentation: absent. agreement with the data of Starmer et al. (1978a), except Assimilation: + A/^-Acetyl-D-glucosamine that D-xylose assimilation was found to be late and either Glucose Galactose Methanol weak or strong rather than negative. None of the strains L-Sorbose + Ethanol examined fermented glucose, but Starmer et al. (1978a) Sucrose + Glycerol + + Erythritol reported a few isolates of P. cactophila to give a slow Maltose Ribitol V + and weak fermentation of this sugar, consequently, glucose Cellobiose Trehalose Galactitol +/w fermentation is listed as either weak or absent. Lactose D-Mannitol +/ P. cactophila has been isolated from a wide variety Melibiose + D-Glucitol of cacti (Starmer et al. 1978a, 1990), and this lack Raffinose V a-Methyl-D-glucoside Salicin + + of cactus habitat specificity contrasts with the more Melezitose + D-Gluconate stringent niche requirements of most other cactophilic Inulin + DL-Lactate Pichia spp. P cactophila and P pseudocactophila show Soluble starch + D-Xylose + Succinate about 35% nDNA relatedness. For fiirther discussion L-Arabinose Citrate + of these two species, see the Comments sections under D-Arabinose Inositol D-Ribose Hexadecane P pseudocactophila. Additional assimilation tests and other growth characteristics:

42.17. Pichia canadensis (Wickerham) Kurtzman (1984a) Anamorph: Candida melinii Diddens & Lodder Synonyms: Hansenula canadensis Wickerham (1951) Azymohansenula canadensis (Wickerham) Novak & Zsolt (1961) Candida melinii Diddens & Lodder (1942) Hansenula wingei Wickerham (1956) Endomycopsis wingei (Wickerham) Novak & Zsolt (1961)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to elongate, (1.1-4.6) x(2.88.0) (im, and single or in pairs. Growth is butyrous and tannish-white. Growth on the surface of assimilation media: Pellicles are absent or barely visible. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and highly branched pseudohyphae. True hyphae are also present. Aerobic growth is light tan in color, glistening, and butyrous. Margins of colonies are entire to lobed and may be fringed with pseudohyphae. An esterlike odor is present. Formation of ascospores: Asci of the type strain are unconjugated single cells that contain two or rarely three hat-shaped ascospores. Asci deliquesce to liberate the spores. Single-spore isolates from two-spored asci gave

L-Rhamnose D-Glucosamine

+/w

-

Nitrate Vitamin-free

V

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at ST'^C + 10% NaCl/5% glucose Co-Q: 7, CBS 1991 (Yamada et al. 1973a). Mol% G + C: 40.9, CBS 661 {T^: Stenderup and Bak 1968); 39.0^0.0, CBS 1992, CBS 2431 {T^: Nakase and Komagata 1971b); 39.7^0.8, CBS 1992 and 6 additional strains (BD: Fuson et al. 1979).

Origin of the strains studied: Frass from a red pine (Pinus resinosa Ait.), Ontario, Canada (1); frass from an eastern white pine {Pinus strobus L.), New Hampshire (1); dead conifer, Wyoming (1); from fungi cultured from a live bark beetle obtained from an Engelmann spruce (Picea engelmannii Parry), Colorado (2); Engelmann spruce, Wyoming (3); frass from a dead coniferous tree, Quebec, Canada (1). Complementary mating types: NRRL Y-2340-5 (CBS 2432) and NRRL Y-2340-21 (CBS 2433), derived as single-ascospore isolates from the type strain of the synonym Hansenula wingei. Type strain: CBS 1992 (NRRL Y-1888), isolated by Wickerham from frass of a red pine. Comments: Wickerham (1956, 1970a) noted the phenotypic similarity of/? (H.) canadensis and P. (H) wingei but

296

Vb. Descriptions of teleomorphic ascomycetous genera and species

distinguished between the two, observing that P. canadensis produced no true hyphae and appeared homothalHc while H. wingei formed true hyphae and was heterothallic. Indeed, H. wingei was quite remarkable in that mixtures of opposite mating types showed strong sexual agglutination (Wickerham 1956). Subsequently, this process was studied in detail by various investigators (Brock 1965, Conti and Brock 1965, Crandall and Brock 1968, Herman et al. 1966, Hunt and Carpenter 1963, Taylor and Orton 1968). Fuson and coworkers (1979) compared the nDNA relatedness of several Pichia (Hansenula) species and showed H. canadensis and H. wingei to share 78% of their nuclear DNA base sequences. On the basis of previously established guidelines (Price et al. 1978), these workers suggested the two taxa to be conspecific. Kurtzman (unpublished), using somewhat different techniques, found the two species to have 76% nDNA complementarity, thus confirming this unexpected relatedness. Because H. canadensis was described 5 years earlier than H. wingei, the former species epithet has priority of usage. Extensive single-spore isolations failed to detect heterothallism in P canadensis and, therefore, precluded demonstration of conspecificity with H. wingei through mating studies (Kurtzman, unpublished). However, all single-spore isolates were obtained from two-spored asci, and it is entirely possible that these spores were diploid. By comparison, because of the predominance of diploid spores, heterothallism in Pichia amylophila nearly escaped detection (Kurtzman et al. 1980a). Regardless of whether P canadensis is homothallic or heterothallic, considering the mating system as a key character for taxonomic separation seems unsound. It has been shown that the mutation of a single locus in Saccharomyces cerevisiae (Hicks and Herskowitz 1976) and in Schizosaccharomyces pombe (Leupold 1950) will change the mating behavior from heterothallic to homothallic. During studies of nDNA relatedness among strains of P canadensis (Kurtzman, unpublished), two isolates were included that were phenotypically similar to the others except that they did not utilize nitrate. Both isolates were obtained from the frass of conifers. When reassociated with NRRL Y-1888, NRRL YB-1915 showed 91% complementarity and NRRL YB-1931 gave 95%. These comparisons have provided additional evidence that nitrate utilization is not a species- or genus-specific character and account for the variable nitrate reaction given for P canadensis.

Cryptococcus molischianus (Zikes) Skinner (1947b) Candida molischiana (Zikes) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Torulopsis methanophiles Urakami (1975)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.2-5.0)x(2.45.8) |im, and single, in pairs, or occasionally in small clusters. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Infrequently, thin pellicles may be produced and mucoid rings are occasionally formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass is devoid of pseudohyphae or true hyphae. Aerobic growth is white to tannish-white, glistening, and mucoid. Cultures usually produce a faint pleasant odor. Formation of ascospores: There are one or two hatshaped ascospores per ascus (Fig. 134). Conjugation usually precedes sporulation and may be between a cell and its bud or infrequently between independent cells. In the latter case, conjugants commonly are a cell and the bud of another cell. Asci are deliquescent and spores are liberated soon after formation. Single-spore isolates produce sporogenous cultures, but because no more than two spores are formed per ascus, the evidence that this species is homothallic is not conclusive. However, the presence of parent-bud conjugation is suggestive of homothallism. Ascospores were observed on YM and 5% malt extract agars after 5-10 days at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose 42.18. Pichia capsulata (Wickerham) Kurtzman Raffinose (1984a) Melezitose Anamorph: Candida molischiana (Zikes) S.A. Meyer & Yarrow, on the Inulin Soluble starch basis of phenotypic similarity (see Comments). D-Xylose Synonyms: L-Arabinose Hansenula capsulata Wickerham (1951) D-Arabinose Kuraishia capsulata (Wickerham) Y. Yamada, Maeda & Mikata D-Ribose (1994c) L-Rhamnose Torula molischiana Zikes (1911) D-Glucosamine Torulopsis molischiana (Zikes) Lodder (1934)

+

+

-

+ + +

V

V

-

+ + V V

+ V

+

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + +

+

-

+ + V

+ V

V

-

+/

-

297

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 3 7 T v 10% NaCl/5% glucose v Co-Q: 8, CBS 1993, AJ 4173 (Yamada et al. 1973a). Mol% G + C: 46.8, 47.1, CBS 1993, CBS 5807 {T^: Nakase and Komagata 1971b); 46.9, CBS 1993 (BD: Kurtzman, unpubHshed).

Origin of the strains studied: Frass from mainly coniferous trees (53); soil on humus (3); lichen (1); cattle dung (1).

%sP

#

Formation of ascospores: This species is heterothallic. Natural isolates may be either haploid or diploid. Diploids, such as the type strain, undergo ascosporulation without prior conjugation and form three to four hat-shaped ascospores that are freed through ascus deliquescence. Paired complementary mating types may show strong sexual agglutination prior to conjugation and ascosporulation. Ascospore formation occurs on McClary's acetate agar, or less frequently on YM and 5% malt extract agars, after 3-5 days at 25°C. Fermentation:

I*.

۩0 ^m

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows some "tree-like" outgrowths comprised of short cells, but wellbranched pseudohyphae and true hyphae are lacking. Aerobic growth is butyrous, tannish-white, and glistening with an irregular surface and a finely lobed margin. Colonies are convex in profile. A faint acidic, ester-like odor is present.

^ m

Fig. 134. P. capsulata, CBS 1993. Ascosporogenous culture after 3 days, 2 5 ^ , on 5% malt extract agar. Bar = 5 |xm.

Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + -

Type strain: CBS 1993 (NRRL Y-1842), isolated by Wickerham from frass of a coniferous tree on the shore + of Wabatongushi Lake, near Franz, Ontario, Canada. Comments: P. capsulata produces copious amounts of extracellular polysaccharides. The structures of the + mannans and phosphomannans synthesized by this species + have been studied in detail by Slodki et al. (1972), Gorin + (1973) and Seymour et al. (1976). Ascosporulation has not been observed for Candida molischiana, and the proposed conspecificity with P. capsulata is based on similar appearance in culture and the same assimilation profile. However, Lee and Komagata (1983) noted that the two taxa had somewhat different Additional assimilation tests and other growth electrophoretic patterns for their cellular enzymes and characteristics: 2-Keto-D-gluconate Starch formation raised the possibility that they may not represent an 5-Keto-D-gluconate Gelatin liquefaction anamorph-teleomorph pair. Saccharate Growth at 37°C v 42.19. Pichia caribaea Phaff, Starmer, Lachance, Aberdeen & Tredick-Kline (1992) Synonym: Pichia amethionina Starmer, Phaff, Miranda & M.W. Miller var. fermentans Starmer & PhafF(1983) nom. nud.

Growtli on 5% malt extract agar: After 3 days at 25T, the cells are ovoidal to cylindroidal, (1.8^.0)x(3.010.2) jim, and single, in pairs or in short chains. Growth is butyrous and tannish-white. Growth on the surface of assimilation media: Pellicles are absent but a film may form.

10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 34.0-34.4, CBS 7692, and 3 additional strains (BD: Phafie et al. 1992).

Origin of the strains studied: CBS 7692 (UCDFST 81-62, NRRL Y-17468) from rotting prickly pear cactus {Opuntia stricta), Exuma chain, Bahamas; CBS 7695 (UCD-FST 82-570C, NRRL Y-17469) from rotting columnar cactus (Cephalocereus royenii). Island of Montserrat, West Indies; CBS 7696 (UCD-FST 83-711.2, NRRL Y-17472) from prickly pear cactus, Conception Island, Bahamas.

298

Vb. Descriptions of teleomorphic ascomycetous genera and species

Complementary mating types: CBS 7693 [UCDFST 81-280, NRRL Y-17470 Qr)] and CBS 7694 [UCDFST 81-279, NPIRL Y-17471 C^)], single-spore isolates from UCD-FST 81-36, from the Exhumas chain, Bahamas (Phaffetal. 1992). Type strain: CBS 7692. Comments: Phaff et al. (1992) reported ca. 40% nDNA relatedness between R caribaea and each of the two varieties of P. amethionina. Interspecific matings gave zygotes, but asci were aberrant and produced malformed ascospores. These data showed the two taxa to be reproductively isolated sibling species. The host range of P. caribaea and its geographical distribution throughout the Caribbean was well documented by Phaff et al. (1992). Results from the present study are in agreement with Phaff et al. (1992) except that NRRL Y-17469 latently assimilated D-xylose in contrast to the reported inability to grow on this pentose, and the strain also failed to grow at 37°C. Phaff et al. (1992) reported that, as for P amethionina, P caribaea is a naturally occurring auxotroph that requires an organic form of sulfur, such as L-methionine or L-cysteine. 42.20. Pichia castillae Santa Maria & Garcia Aser (1970) Synonym: Yamadazyma castillae (Santa Maria & Garcia Aser) Billon-Grand (1989)

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+ + +

-

+ +

-

+ + + +

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + + + + +

-

+ +

-

+ +

-

+

-

Additional assimilation tests and other g;roi characteristics: Starch formation 2-Keto-D-gluconate 5-Kv^to-D-gluconate Gelatin liquefaction Growth at 3 7 ^ w Saccharate 10% NaCl/5% glucose + Co-Q: 9, CBS 6053 (Billon-Grand 1985). Mol% G + C: 39.5, CBS 6053 {T^,: Billon-Grand 1981).

Origin of the strain studied: Frass of insects infesting the tree Gymnocladus canadensis (1). Type strain: CBS 6053 (NRRL Y-7501). 42.21. Pichia chambardii (C. Ramirez & Boidin) Phaff (1956)

Growth on 5% malt extract agar: After 3 days at 25T, the cells are ovoidal to ellipsoidal, (1.4-3.5)x(2.07.0) |im, and occur singly, in pairs and in clusters. Growth is butyrous and tannish-white in color.

Synonyms: Saccharomyces chambardi C. Ramirez & Boidin (1954) (also in Ramirez & Boidin 1955) Petasospora chambardi (C. Ramirez & Boidin) Boidin & Abadie (1954)

Growth on the surface of assimilation media: Thin, slightly climbing pellicles are present.

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (1.8^.1)x(2.6-6.8)|im, and occur singly or in pairs. Growth is butyrous and grayish-white in color.

Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows only sparse and poorly differentiated pseudohyphae. True hyphae are not present. Aerobic growth is tannish-white in color, somewhat butyrous, and with a smooth, dull to faintly glistening surface. The margin is lobate. A faint acidic odor is present. Formation of ascospores: The asci, which show isogamic or heterogamic conjugation, produce two to four hat-shaped ascospores. Spores are released rapidly following their formation. Santa Maria and Garcia Aser (1970) reported this species to be homothallic. Ascospores were observed on YM and 5% malt extract agars after 10 days at 25°C. Fermentation: absent.

Growth on the surface of assimilation media: Thin pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows only infrequent undifferentiated pseudohyphal strands. True hyphae are not formed. Aerobic growth is white in color, butyrous, smooth, dull-glistening, and with an occasionally lobed margin. A faint acidic odor is present. Formation of ascospores: Asci are unconjugated and form one to four (usually two) hat-shaped ascospores. The spores are liberated at maturity. It is not known whether the species is homothallic or heterothallic. Ascospores were observed on 5% malt extract agar after 3 days at 25T. Fermentation: absent.

299

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + w -

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Growth at 37°C Saccharate 10% NaCl/5% glucose Co-Q: 7, CBS 1900, IFO 1029, IBL 2575 (Yamada et al. 1973a). Mol% G + C: 30.2, IFO 1029 (7;^: Nakase and Komagata 1970b); 33.8, CBS 1900 (BD: Kurtzman, unpublished).

Origin of the strain studied: Tanning liquor, France (1). Type strain: CBS 1900 (NRRL Y-2378). 42.22. Pichia ciferrii (Lodder) Kurtzman (1984a) Synonyms: Hansenula ciferrii Lodder (1932) Hansenula anomala (Hansen) H. & P. Sydow van ciferrii Lodder & Kreger-van Rij (1952) Endomycopsis ciferrii (Lodder) Novak & Zsolt (1961)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (3.3-5.0)x(3.99.5) (im, and single, in pairs, or in small clusters. Growth is butyrous and white in color. Growth on the surface of assimilation media: Pellicles are thin, smooth, and waxy. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and highly branched pseudohyphae. Mycelial variants derived from the type strain, such as NRRL Y-1322, form abundant true hyphae. Aerobic growth is white, faintly glistening to dull, and butyrous. Colony margins are usually lobed and may be fringed with pseudohyphae. A faint ester-like odor is present. Formation of ascospores: Diploid cells convert to asci and form one to four hat-shaped ascospores. Asci are deliquescent. This species is heterothallic, and Wickerham and Burton (1954b) obtained mating types by heat-treating the sporogenous diploid type culture. Ascospores were observed on 5% malt extract agar and sterilized carrot slices after 4-10 days at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

+ +/w +

Lactose Raffinose Trehalose

+ +

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/w +

+ + + +/w +/w + +/w

+ + + + + + + + + + + + + +

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate + Growth at 2>TC Saccharate w/10% NaCl/5% glucose w Co-Q: 7, CBS 111 (Yamada et al. 1973a). Mol% G + C: 32.2, CBS 111 (r^^ Nakase and Komagata 1971b).

Origin of the strain studied: Pod from the Tonka-bean tree {Dipteryx odorata), Dominican Republic (1). Complementary mating types: NRRL Y-1031-11 (CBS 1990) and NRRL Y-1031-27 (CBS 1991). Type strain: CBS 111 (NRRL Y-1031), isolated by Ciferri from Tonka-bean. Comments: On standard tests, P. ciferrii differs from P anomala only in the ability to assimilate rhamnose. Wickerham (1970a) considered the species distinct, however, because they showed no mating response following mixture of their mating types, and P ciferrii produces crystals of tetraacetylphytosphingosine (Wickerham and Stodola 1960, Stodola and Wickerham 1960, Wickerham and Burton 1962), but P anomala has never been observed to produce this compound. Additionally, Nakase and Komagata (1971b) reported P ciferrii to have a G + C content nearly 4% lower than that of P anomala which suggests an almost complete lack of nDNA base sequence complementarity. 42.23. Pichia delftensis Beech (1965) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (2.5-5.3)x(2.7-8.9)|im, and occur singly or in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are formed.

300

Vb. Descriptions of teleomorphic ascomycetous genera and species

Dalmau plate culture on morphology agar: After 7 days at 25*^0, growth under the coverglass shows only an occasional undifferentiated pseudohyphal outgrowth. True hyphae are not formed. Aerobic growth is white in color, dull to slightly glistening, butyrous and with a finely lobed margin. Formation of ascospores: Asci may be unconjugated, or show conjugation between independent cells. One to four hat-shaped ascospores are formed per ascus, and the asci slowly deliquesce. It is not known whether the species is homothallic or heterothallic. Ascospores were observed on YM and 5% malt extract agars after 3-10 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

w/-

Lactose Raffinose Trehalose

25T, the cells are ellipsoidal to elongate, (2.2-4.5)x(2.77.6) |im, and single, in pairs and in small clusters. Growth is tannish-white, semi-glistening and butyrous. Growth on the surface of assimilation media: Thin pellicles often form. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows pseudohyphae that range from poorly differentiated to moderately branched. True hyphae are not produced. Aerobic growth is tannish-white, semi-glistening, butyrous, and convex in profile with a depressed center. Colony margins are smooth tofinelyscalloped. A faint acidic odor is present. Formation of ascospores: Asci are often unconjugated but some appear to have undergone conjugation with a bud. Ascospores are hat-shaped and two are formed per deliquescent ascus (Fig. 135). Single-spore isolates form ascosporogenous colonies.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + -

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Growth at 3TC Saccharate 10% NaCl/5% glucose + Co-Q: 7, CBS 2614 (Billon-Grand 1985). Mol% G + C: 33.2, CBS 2614 (BD: Kurtzman, unpublished).

Origin of the strain studied: Naturally fermented apple juice, England (1). Type strain: CBS 2614 (NRPIL Y-7119). Comments: As noted earlier, R delftensis resembles P. amethionina and many other species isolated from cacti. 42.24. Pichia deserticola Phaff, Starmer, Tredick & Miranda (1985) Anamorph: Candida deserticola Phaff, Starmer, Tredick & Miranda Synonym: Candida deserticola Phaff, Starmer, Tredick & Miranda (1985)

Growth on 5% malt extract agar: After 3 days at

»

^*iii.

Fig. 135. P. deserticola, CBS 7119. Ascosporogenous culture after 10 days, 25°C, on McClary's acetate agar. Bar = 5 |im.

Ascospores were observed on McClary's acetate agar after 2-10 days at 25^C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + +/w w -

301

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Additional assimilation tests and other growth characteristics:

are persistent. Scott and van der Walt (1971a) reported that heat treatment of sporogenous cultures gave colonies 2-Keto-D-gluconate Starch formation which sporulated, thus suggesting this species to be 5-Keto-D-gluconate Gelatin liquefaction homothallic. However, ascospores from two-spored asci Saccharate Growth at 37°C + may be diploid. 10% NaCl/5% glucose Ascospores were observed on 5% malt extract and YM Co-Q: Not determined. agars after 3-10 days at 25°C. Mol% G + C: 27.4-28.4, CBS 7119 and 7 additional strains (BD: Phaflf et al. 1985). Fermentation: absent. Origin of the strains studied: P. deserticola: CBS 7119 Assimilation: (UCD-FST 83-467.3, NRRL Y-12918), from prickly pear Glucose iV-Acetyl-D-glucosamine + Methanol cactus (Opuntia phaeacantha), Santa Catalina Mountains, Galactose Ethanol + Arizona, U.S.A.; CBS 7120 (UCD-FST 81-403B, NRRL L-Sorbose Sucrose Glycerol + Y-12919), from O. phaeacantha, Tucson Mountains, Maltose Erythritol Arizona. Candida deserticola: CBS 7121 (UCD-FST 76- Cellobiose Ribitol + Galactitol 355A, NRRL Y-12920), type strain, from columnar cactus Trehalose D-Mannitol + (Stenocereus gummosus), Mulege, Baja California, Mex- Lactose D-Glucitol + ico; CBS 7122 (UCD-FST 82-451A, NRRL Y-12921), Melibiose Raffinose a-Methyl-D-glucoside from columnar cactus (Stenocereus hystrix), Gonna'ives, Melezitose Salicin Haiti. Inulin D-Gluconate + Type strain: CBS 7119. Soluble starch DL-Lactate + D-Xylose

V

Succinate

+

Comments: Results from the present study are in L-Arabinose Citrate + good agreement with the original description. Phaff D-Arabinose Inositol Hexadecane et al. (1985) showed nearly 100% nDNA relatedness D-Ribose Nitrate + between P. deserticola and the nonascosporogenous strains L-Rhamnose Vitamin-free + designated as Candida deserticola. The former taxon D-Glucosamine occurs in species of prickly pear cacti whereas the latter Additional assimilation tests and other growth is almost exclusive to columnar cacti. P. deserticola and characteristics: Starch formation its anamorph are noteworthy because they assimilate so 2-Keto-D-gluconate Gelatin liquefaction few carbon compounds, although their strong growth on 5-Keto-D-gluconate Growth at 37°C Saccharate ethyl acetate provides one means to separate them from 10% NaCl/5% glucose P antillensis. It should be pointed out that P. deserticola Co-Q: Not determined. has the lowest nDNA base composition of any known Mol% G + C: 31.8, 31.0, CBS 6154 (HPLC: Miller and Baharaeen 1979; BD: Phaff etal. 1983). yeast. Origin of the strains studied: From tunnels of the pin hole borer Platypus externedentatus Fairm. infesting 42.25. Pichia dryadoides (D.B. Scott & van der various figs (Ficus spp.), Natal, South Africa (2). Walt) Kurtzman (1984a) Type strain: CBS 6154 (NRRL Y-10990), isolated Synonym: from Ficus sycomorus L. Hansenula dryadoides D.B. Scott & van der Walt (1971a) Comments: Minor differences in growth reactions were Growth on 5% malt extract agar: After 3 days at 25°C, noted between the original description and the present the cells are spheroidal or ellipsoidal, (2.5-5.3)x(2.6- study. Scott and van der Walt (1971a) reported growth on 7.7) |im, and single, in pairs, and in small clusters. Growth D-xylose, salicin, in osmotic medium and at 37°C. Of the is butyrous and tannish-white in color. two strains examined in the present study, neither grew Growth on the surface of assimilation media: on salicin nor in osmotic medium, and one failed to grow Pellicles are not formed but occasional incomplete rings on D-xylose as well as at BT^'C. Scott and van der Walt (1971a) noted that Candida berthetii is rather similar to may be observed. P dryadoides, but the 5% difference in G + C that Poncet Dalmau plate culture on morphology agar: After (1973a) detected between the two taxa would preclude 7 days at 25°C, growth under the coverglass shows conspecificity. only rudimentary pseudohyphae. True hyphae are not produced. Aerobic growth is tannish-white, glistening, and butyrous. Margins vary from entire to lobed. A faintly acidic odor is present. Formation of ascospores: Diploid cells convert directly to asci and each ascus contains two, or less frequently one, hat-shaped ascospores with prominent brims. Asci

42.26. Pichia euphorbiae van der Walt & Opperman (1983) Anamorph: Candida euphorbiae van der Walt & Opperman Synonym: Candida euphorbiae van der Walt & Opperman (1983)

Growth on 5% malt extract agar: After 3 days at

Vb. Descriptions of teleomorphic ascomycetous genera and species

302

25°C, the cells are occasionally spheroidal, but usually ellipsoidal to cylindroidal, (1.1-6.0) x (2.2-12. l)|im, and single, in pairs, and in small clusters. Growth is butyrous, slightly glistening and tannish-white. Growth on the surface of assimilation media: Pellicles were not observed, but rings and islets of surface growth occur. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass is comprised of well-branched pseudohyphae with blastoconidia; true hyphae are present as well. Aerobic growth is white to tannish-white, moderately glistening and butyrous. Colony margins are scalloped with hyphal outgrowths. A faintly acidic odor is present. Formation of ascospores: This species is heterothallic and has been isolated from nature only as haploid mating types. Cultures of paired complementary mating types form asci with one to four hat-shaped ascospores. Asci are deliquescent. Ascospores were observed on 5% malt extract agar after 10-15 days at 15°C. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

ws

-

+

-

+ + + +

-

+

-

+ +

-

+

-

Lactose Raffinose Trehalose

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

-

Type strain: CBS 8033 (NRRL Y-17232), a diploid constructed by the mating of CBS 7082 and CBS 7083. Comments: Van der Walt and Opperman (1983) noted P. euphorbiae to be phenotypically similar to P. rhodanensis, P. wickerhamii, P amylophila, P mississippiensis, P ueronae and P meyerne, which are also heterothallic. Pairings with these species gave a mating reaction only with P meyerae. The reaction was limited to formation of infrequent zygotes that failed to produce ascospores, suggesting the two taxa to be closely related but reproductively isolated species. 42.27. Pichia euphorbiiphila (van der Walt) Kurtzman (1984a) Anamorph: Candida euphorbiiphila van der Walt Synonyms: Hansenula euphorbiiphila (as H. euphorbiaphila) van der Walt (1982b) Candida euphorbiiphila (as C. euphorbiaphila) van der Walt (1982b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are short ellipsoidal to cylindroidal, (2.04.6) X (2.3-8.5) |im, and occasionally tapered. Growth is butyrous, glistening and white to tannish-white. Growth on the surface of assimilation media: Pellicles are not formed but rings are occasionally seen. Dalmau plate culture on morphology agar: After 7 days at 25^C, growth under the coverglass shows abundant, well-branched pseudohyphae with blastoconidia. True hyphae are not formed. Aerobic growth is white to tannish-white, glistening, butyrous, convex in profile with a slight central depression, and with margins that are smooth tofinelyscalloped. There is a faint odor of esters.

+ + + + + + + +

f^^

K^'

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mor/o G + C: Not determined.

Starch formation Gelatin liquefaction Growth at 3>T

-

F 'H

^ ^

V

Origin of the strains studied: Insect infested spurge {Euphorbia ingens E. Mey.), Groblersdal area, South Africa (2). Complementary mating types: CBS 7082 (NRRL Y-17233) and CBS 7083 (NRRL Y-17757).

Fig. 136. P euphorbiiphila, CBS 8083. Ascosporogenous culture after 3 days, 25°C, on McClary's acetate agar. Bar = 5|im.

Formation of ascospores: This species is heterothallic but has been isolated from nature only in the diploid state. Asci from diploid strains are unconjugated and produce two to four hat-shaped ascospores (Fig. 136). Asci become deliquescent at maturity. Van der Walt (1982b) isolated

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

303

haploid mating types from the spomlated type strain through heat treatment. Ascospores were observed on McClary's acetate agar, and to a lesser extent on 5% malt extract agar, after 2-5 days at IS^'C. Fermentation:

Growth on the surface of assimilation media: Thin pellicles and rings are produced.

Assimilation:

Formation of ascospores: This species is heterothallic and only asporogenous haploid isolates have been obtained from nature. Following the mixture of complementary mating types, zygotes may directly convert to asci or they may bud diploid cells which can become asci. The asci contain one to four hat-shaped ascospores and become deliquescent upon maturity. Ascospores were observed on 5% malt extract agar after 5-10 days at 25^C.

Glucose Galactose Sucrose Maltose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ -

Lactose Raffinose Trehalose

-

+ + + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + s + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 47.3, CBS

w/-

Starch formation Gelatin liquefaction Growth at 37°

+

8083 (BD: Kurtzman, unpublished).

Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows occasional pseudohyphae. True hyphae are not produced. Aerobic growth is tannish-white, glistening, and butyrous. Margins are entire or lobed; pseudohyphae are not formed around the periphery of aerobic colonies. An ester-like odor is produced.

Fermentation: Glucose Galactose Sucrose Maltose

+ + + ws

Lactose Raffinose Trehalose

w -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + -

Origin of the strains studied: CBS 8083 (NRRL Y-12742), from insect infested decaying tissue of spurge {Euphorbia ingens), Transvaal, South Africa; CBS 7912 (NRRL Y-12743) and CBS 7913 (Y-12744), which were derived from heat-treatment of the type strain. Complementary mating types: CBS 7912 {a) and CBS 7913 (a), derived from CBS 8083. Type strain: CBS 8083. Additional assimilation tests and other growth Comments: Van der Walt (1982b) noted the phenotypic characteristics: Starch formation similarity of P. euphorbiiphila with R americana and 2-Keto-D-gluconate Gelatin liquefaction P. bimundalis, but mating types of P euphorbiiphila 5-Keto-D-gluconate Growth at 37° Saccharate showed no response to those of the latter two species. 42.28. Pichia fabianii (Wickerham) Kurtzman (1984a) Anamorph: Candida fabianii K. Kodama, Kyono, lida & Onoyama Synonyms: Hansenula fabianii Wickerham (1965a) Candida fabianii K. Kodama, Kyono, lida & Onoyama (1964a)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.0^.2) x (2.06.5) (im, and single, in pairs, or in small clusters. Growth is butyrous and tannish-white in color.

10% NaCl/5% glucose + Co-Q: 7, CBS 5640 and 3 additional strains (Yamada et al. 1973a). Mol% G + C: 44.4-45.6, CBS 5640 and 5 additional strains {T^\ Nakase and Komagata 1971b); 46.7, CBS 5640 (BD: Kurtzman, unpublished).

Origin of the strains studied: A contaminant of a fermentor inoculated with Aerobacter aerogenes for production of butylene glycol, U.S.A. (1); alcohol fermentation plant, Cheju Island, Korea (3); rice koji, Japan (4). Complementary mating types: NRRL Y-1871 (CBS 5640) and NRRL Y-1873 (CBS 5641).

304

Vb. Descriptions of teleomorphic ascomycetous genera and species

J z»

Type strain: CBS 5640 (NRRL Y-1871), isolated from a fermentor used for butylene glycol production. Comments: Of the heterothallic species of Pichia, P. fabianii is most like P. subpelliculosa. The two are dissimilar only in their assimilation of erythritol, which is negative for P. fabianii. Nakase and Komagata (1971b) reported the G + C contents of the two species to differ by nearly 11% and this would preclude their conspecificity.

j8)

Jpr '

•|

?^.^

42.29. Pichia farinosa (Lindner) E.C. Hansen (1904) Synonyms: Saccharomyces farinosus Lindner (1894) Zygosaccharomyces farinosus (Lindner) Papadakis (1922) Zygopichia farinosa (Lindner) Klocker (1924) Yamadazyma farinosa (Lindner) Billon-Grand (1989) Pichia miso Mogi (1939) nom. nud. Saccharomyces miso (Mogi) Novak & Zsolt (1961) nom. nud. Zygopichia miso Mogi (1942) nom. nud. Zygosaccharomyces tikumaensis Mogi (1942) nom. nud. Pichia mogii Ohara & Nonomura (1954a) nom. nud. Zygopichia sake Naganishi (1941a) nom. nud. Pichia sake (Naganishi) Ohara & Nonomura (1954b) nom. nud. Zygopichia farinosa (Lindner) Klocker yax. japonica Naganishi (1941b) nom. nud. Pichia farinosa (Lindner) E.C. Hansen var, Japonica Ohara & Nonomura (1954b) nom. nud. Pichia minuscula Soneda (1959) Debaryomyces halotolerans Sasaki & Yoshida (1966) nom. nud. Candida cacaoi H.R. Buckley & van Uden (1968) Pichia petrophilum Mu (Mu et al. 1979) Pichia sorbitophila Rodrigues de Miranda, Appel & Seyfarth (1980)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to elongate, (1.5-5.0)x(3.0-18.0) (im, and occur singly, in pairs and in short chains. Growth is white to occasionally faintly yellowish-white in color. Growth on the surface of assimilation media: Heavy, dry climbing pellicles develop. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows pseudohyphae which, depending upon the strain, may be poorly differentiated to moderately branched. True hyphae are not formed. Aerobic growth is white, smooth to rugose, powdery, and generally has lobed margins. A faint ester-like odor is produced by some strains. Formation of ascospores: Asci show parent cellbud conjugation and produce one to four spheroidal to subspheroidal ascospores (Fig. 137). Asci are generally persistent, although free spores are occasionally observed. Single-spore isolates from four-spored asci from the type strain and one additional strain were sporogenous, indicating the species to be homothallic (Kurtzman, unpublished). Kawakami et al. (1961) and Kreger-van Rij (1970c) reported the spores to have

Fig. 137. P. farinosa, NRRL Y-2060. Ascosporogenous culture after 3 days, 25''C, on V8 agar. Bar = 5 jim.

a thin, subequatorial ledge visible under the electron microscope. Ascospores were observed on V8, RG and YM agars after 3-5 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

+ w/-

-

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi"ee

+

V

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

V V V V

V V V

-

+

-

-

+ + + +

-

+ + V V

+

V

+

-

+

V

Additional assimilation tests and other g[row! characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction w/Saccharate Growth at 37° + -

10% NaCl/5% glucose + Co-Q: 9, CBS 185 and 5 additional strains (Yamada et al. 1973a). Mol% G + C: 38.8-39.8, AJ 4134, AJ 4136, AJ 4138 (T;^: Nakase and Komagata 1970b); 42.7, CBS 185 (BD: Kurtzman, unpubHshed).

Origin of the strains studied: 'Jopenbier' (1); fermenting cacao, Trinidad (1); miso (2); stored rice (4); wheat flour (1); other substrates (2); Debaryomyces

305

42. Pichia E.C. Hansen emend. Kurtzman / C.R Kurtzman

halotolerans (2); R sorbitophila (CBS 7064, NRRL Y-12695); P. petrophilum (CBS 7911, NRPIL Y-11953). Type strain: CBS 185 (NRRL Y-7553) from 'Jopenbier'. Comments: The extent of nDNA relatedness between the type strain of P. farinosa and the type strains of Debaryomyces halotolerans, P sorbitophila and P petrophilum was 100%, 70% and 72%), respectively (Kurtzman, unpublished). These results indicate the latter three taxa to be conspecific with P farinosa. 42.30. Pichia fermentans Lodder (1932) Anamorph: Candida lambica (Lindner & Genoud) van Uden & H.R. Buckley, on the basis of phenotypic similarity. Synonyms: Zymopichia fermentans (Lodder) Novak & Zsolt (1961) Saccharomyces pastorianus-arborescens van Laer (1902) Mycoderma lambica Lindner & Genoud (1913) Candida lambica (Lindner & Genoud) van Uden & H.R. Buckley (1970) Torula monosa Kluyver (1914) Mycotorula monosa (Kluyver) Harrison (1928) Candida monosa (Kluyver) Diddens & Lodder (1942) Saccharomyces dombrowskii Sacchetti (1933) Pichia dombrowskii Sacchetti, nom. nud.? (Lodder & Kreger-van Rij 1952) Saccharomyces scandinauicus Dietrichson (1954) Candida fimetaria Soneda (1959) Candida krusei (Castellani) Berkhout var. transitoria Saez (1965)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to ellipsoidal, (1.9-6.5) x (4.014.4) |im, and occur singly, in pairs and in short chains. Growth is tannish-yellow in color. Growth on the surface of assimilation media: Thin to thick climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and moderately branched pseudohyphae. True hyphae are not present. Aerobic growth is white and dull with the surface wrinkled by convoluted growth. Margins are lobate. A weak ester-like odor is produced by some strains. Formation of ascospores: Asci may be unconjugated or show conjugation between independent cells or between a parent cell and a bud. Two to four ascospores are formed per ascus, and asci become deliquescent. Spores are hatshaped but the ledge is not always easily detected under the light microscope. Single-spore isolates from fourspored asci are ascosporogenous, indicating the species to be homothallic. Ascospores were observed on YM, 5% malt extract, and V8 agars after 10-20 days at 25^C. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raflfinose Trehalose

-

Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

v

Starch formation Gelatin liquefaction Growth at 37°

Co-Q: 7, CBS 246 (Yamada et al. 1973a). Mol% G + C: 42.2, AJ 4458, AJ 4891 (7;„: Nakase and Komagata 1970b); 43.1, CBS 187 (BD: Fuson et al. 1980).

Origin of the strains studied: Buttermilk (1) stracchino cheese (1); sputum (1); spoiled orange juice (1) kefyr (1); cecum of cow (1); Cyanochen cyanopterus (1) Cygnus olor (1). Type strain: CBS 187 (NRRL Y-1619) from buttermilk. Comments: There is considerable phenotypic similarity between P fermentans and P kluyveri var. kluyveri. However, the two may be separated on the basis of the strong assimilation of citrate and D-xylose shown by P fermentans (De Camargo and Phaff 1957). These species also differ by about 14% in G + C contents. 42.31. Pichia finlandica Kurtzman (1984a) Synonyms: Hansenula wickerhamii Capriotti (1961c) Ogataea wickerhamii (Capriotti) Y. Yamada, Matsuda, Maeda & Mikata (1995a)

Growth on 5% malt extract agar: After 3 days at IS^'C, the cells are spheroidal or ellipsoidal, (1.43.3)x(1.4-3.5)jjim, and single or in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not produced. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither hyphae nor pseudohyphae are detected under the coverglass. Aerobic growth is tannishwhite, smooth, glistening, and butyrous. Colony margins are entire to finely lobed. Formation of ascospores: Asci generally form after conjugation between independent cells, but occasionally

Vb. Descriptions of teleomorphic ascomycetous genera and species

306

they are unconjugated or a parent cell may conjugate with a bud. The asci usually produce three or four rather small hat-shaped ascospores that are soon released by deliquescence. Single-spore isolates give ascosporogenous colonies and the species appears to be homothallic (Kurtzman, unpublished). Ascospores were observed on 5% malt extract agar after 2-3 days at 2 5 T . Fermentation: absent.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

s

-

+ V

+ + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + +

-

+ +

Growth on the surface of assimilation media: Dry climbing pellicles are present. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows occasional, sparingly branched pseudohyphae but no true hyphae. Aerobic growth is tannish-white, dull, smooth to partly wrinkled, and with an entire to broadly lobed margin. Formation of ascospores: Asci are unconjugated and form one or two, rarely three or four, spheroidal, roughened spores (Fig. 138). In addition to the roughening, electron microscopy reveals the spores to have a thin subequatorial ring (Kawakami and Nehira 1958, Kreger-van Rij 1964b, Kurtzman and Smiley 1974). Asci are persistent. It is unknown whether the species is homothallic or heterothallic.

-

«>*®^

V

-

w/-

-

+

Additional assimilation tests and other grov characteristics: Starch formation 2-Keto-D-gluconate 5 -Keto-D-gluconate Gelatin liquefaction w/Saccharate Growth at 37T 10% NaCl/5% glucose Co-Q: 7, CBS 4307 (Yamada et al. 1973a). Mol% G + C: 45.4, CBS 4307 {T^ : Nakase and Komagata 1971b).

Origin of the strains studied: Soil from a swamp in which spruce and broad-leafed trees were growing, Hyyttiala Province of Tavastia Australis, Finland (2). Type strain: CBS 4307 (NRRL YB-4943), Capriotti's strain 241-A which he had designated as the type of Hansenula wickerhamii. Comments: With the transfer of species of Hansenula with hat-shaped ascospores to Pichia (Kurtzman 1984a), the name Hansenula wickerhamii was replaced owing to earlier usage of the validly described binomial Pichia wickerhamii (van der Walt) Kreger-van Rij. The species QpithQt finlandica was chosen to denote the country from which the species was isolated. 42.32. Pichia fluxuum (Phaff & Knapp) Kreger-van Rij (1964b) Synonyms: Debaryomycesfluxuum(as D. fluxorum) Phaff & Knapp (1956)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to elongate, (2.0-6.l)x(3.510.5) fxm, and occur singly or in pairs. Growth is yellowish-white in color.

^^

iiiiiiiiiiii ^

O

. *

m it

jmiiiiiii

(^ ®e»

•

(%

Fig. 138. P.fluxuum,CBS 2287. Ascosporogenous culture after 8 days, 15°C, on 5% malt extract agar. Bar = 5 |im.

Ascospores were observed on YM, 5% malt extract and V8 agars after 3-10 days at 15 or 25^C. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ V

V

-

+ +

-

V

+

-

42. Pichia E. C. Hansen emend. Kurtzman / C.P. Kurtzman

Additional assimilation tests and other growth characteristics:

Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Growth at 37T Saccharate 10% NaCl/5% glucose Co-Q: 7, CBS 2287 (Yamada et al. 1973a). Mol% G + C: 32.2, 33.8, CBS 2287 {T^: Nakase and Komagata 1970b; BD: Price et al. 1978).

Origin of the strains studied: Slime flux of oak (Quercus kelloggii) (2); slime flux of fir {Abies concolor) (2); sauerkraut (3). Type strain: CBS 2287 (NRRL YB-4273), from Quercus kelloggii. 42.33. Pichia galeiformis Endo & S. Goto (Goto et al. 1987b) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to cylindroidal, (2.6-3.7)x(3.67.5) |im, and single, in pairs and small clusters. Growth is tannish-white, dull and butyrous. Growth on the surface of assimilation media: Moderately heavy climbing pellicles are produced. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows well-branched pseudohyphae with blastoconidia, but true hyphae are not formed. Aerobic growth is tannishwhite, dull and butyrous. Colonies are convex with finely scalloped margins. A faint musky odor is present. Formation of ascospores: Vegetative cells are directly transformed into unconjugated asci which produce 14 hat-shaped ascospores. Asci deliquesce on maturity. It is not known whether this species is homothallic or heterothallic. Ascospores were formed on McClary's acetate agar after 5 days at 25°C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

307

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC 10% NaCl/5% glucose + Co-Q: 7, CBS 7324 (Goto et al. 1987b). Mol% G + C: 35.6, CBS 7324 {T^: Goto et al. 1987b).

+

Origin of the strains studied: CBS 7324 (NRRL Y17349), from feces, Japan; CBS 763 (NRRL Y-17348), originally from Guilliermond. Type strain: CBS 7324. Comments: Assimilation reactions determined in the present study differ considerably from those listed in the original description of this species. Goto et al. (1987b) reported assimilation of sucrose, maltose, cellobiose, raffinose, melezitose and soluble starch (weak), but absence of growth on glycerol, lactate and succinate. Comparisons of large subunit rRNA partial sequences suggest P. galeiformis to be a sibling species of P membranifaciens (Kurtzman and Robnett, manuscript in preparation). Separation of these two species is discussed in the Comments section of P membranifaciens. Note in proof: Rodrigues et al. (1996) reported high nDNA relatedness between P galeiformis and P mandshurica Saito, resulting in the former species becoming a synonym of the latter. 42.34. Pichia glucozyma (Wickerham) Kurtzman (1984a) Synonyms: Hansenula glucozyma Wickerham (1969b) Ogataea glucozyma (Wickerham) Y. Yamada, Maeda & Mikata (1994c)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal or ellipsoidal, (2.57.l)x(2.5-7.6) |im, and single, in pairs, or in small clusters. Growth is generally mucoid and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not produced. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows no evidence of hyphae or pseudohyphae. Aerobic growth is pink from the presence of ascospores, smooth, moderately glistening, and butyrous. Colony margins are entire or lobed. A faint sweet odor may be present. Formation of ascospores: Conjugation usually, but not always, precedes ascus formation. Generally, conjugation is between a parent cell and a bud, but may also occur between independent cells. Asci are deliquescent and produce from one to four hat-shaped ascospores. Singlespore isolates from four-spored asci form sporogenous cultures; consequently, the species is regarded to be homothallic (Kurtzman, unpublished).

308

Vb. Descriptions of teleomorphic ascomycetous genera and species

Ascospores were observed on YM and 5% malt extract agars after 2-15 days at 25''C. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

+

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/w

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+ +

-

+/w

-

+ +

+/w + + + +

-

+ +

-

V V

-

+/w

-

+

Additional assimilation tests and other growl characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction V 5-Keto-D-gluconate Saccharate Growth at 3>TC + 10% NaCl/5% glucose

w

Co-Q: 7, CBS 5766 (Yamada et al. 1973a). Mol% G + C: 45.1, CBS 5766 {T^ : Nakase and Komagata 1971b).

Origin of the strain studied: The only known strain of P. glucozyma was isolated from frass from an Engelmann spruce (Picea engelmannii Parry) growing in the Medicine Bow Mountains, Wyoming, U.S.A. Type strain: CBS 5766 (NRRL YB-2185). Comments: P glucozyma is a particularly interesting species because of its similarity to P pint. In standard tests, the species differ only in that P glucozyma has the ability to assimilate nitrate. Kreger-van Rij (1964b) reported that although none of the strains of P pint that she studied could assimilate nitrate, some could assimilate nitrite. Despite their great phenotypic likeness, Kurtzman (unpublished) found the type cultures of/? glucozyma and Ppini to share only 3% common nDNA base sequences.

Blastodendrion guilliermondii (Castellani) Guerra (1935) Castellania guilliermondii (Castellani) Dodge (1935) Candida guilliermondii (Castellani) Langeron & Guerra (1938) Endomyces negrii Castellani (1912a) Castellania negrii (Castellani) Dodge (1935) Monilia pseudoguilliermondii Castellani & Chalmers (1919) Castellania pseudoguilliermondii (Castellani & Chalmers) Dodge (1935) Monilia guilliermondii (Castellani) Castellani & Chalmers var. pseudoguilliermondii (Castellani & Chalmers) Castellani (1937a) Monilia muhira Mattlet (1926) Castellania muhira (Mattlet) Dodge (1935) Torula fermentati Saito (1922) Blastodendrion arzti Ota (1924a) Monilia arzti (Ota) Nannizzi (1934) Myceloblastanon krausi Ota (1924a) Blastodendrion krausi (Ota) Ciferri & Redaelli (1929) Mycotorula krausi (Ota) Redaelli & Ciferri (1947) Microanthomyces alpinus Griiss (1926, 1927) Candida paranensis Negroni & Fischer (1941) Torulopsis xylinus Tatsumi & Katagiri (1950) nom. nud. Candida melibiosi Lodder & Kreger-van Rij (1952) Trichosporon appendiculare Batista, Silveira & Silveira (1959a) Torulopsis carpophila M.W. Miller & Mrak (1953) nom. nud. Candida guilliermondii (Castellani) Langeron & Guerra var. carpophila Phaff& M.W. Miller (1961) Torulopsis kestonii Scarr & Rose (1966) Candida kestonii (Scarr & Rose) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Candida guilliermondii (Castellani) Langeron & Guerra var. soya Onishi & Suzuki (1969b) nom. nud. Candida parapsilosis (Ashford) Langeron & Talice var. tokyoensis Suzuki, Sumino, Akiyama & Fukada (1973) nom. nud. Candida mamillae S. Goto (1979b) Candida guilliermondii var. japonica Sugiyama & S. Goto (1969) Candida parapsilosis (Ashford) Langeron & Talice var. tuxtlensis Herrera, Ulloa & Fuentes (1973) Candida amideuorans Balloni, Florenzano, Mazza & Polsinelli (1987)

Growth on 5% malt extract agar: After 3 days at 25^C, the cells are ovoidal to elongate, (1.5-4.8) x (2.015.0) |im, and occur singly, in pairs, or in short chains. Growth is smooth to wrinkled and tannish-white in color. Growth on the surface of assimilation media: Generally pellicles are not formed, but rings may be present.

42.35. Pichia guilliermondii Wickerham (1966)

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, well-branched pseudohyphae bearing whorls of blastoconidia. True hyphae are not present. Aerobic growth is tannish-white, sometimes butyrous, smooth and glistening or dull and rugose. Margins are usually lobate.

Anamorph: Candida guilliermondii (Castellani) Langeron & Guerra Synonyms: Endomyces guilliermondii Castellani (1912a) Endomycopsis guilliermondii Wickerham & Burton (1954b) nom. nud. Yamadazyma guilliermondii (Wickerham) Billon-Grand (1989) Monilia guilliermondii (Castellani) Castellani & Chalmers (1913) Myceloblastanon guilliermondii (Castellani) Ota (1928) Mycotorula guilliermondii (Castellani) Langeron & Guerra (1935) [nee Mycotorula guilliermondii (Castellani) Cottini & Redaelli (Cottini 1939)]

Formation of ascospores: This species is heterothallic and only haploid forms have been isolated. Following the pairing of complementary mating types, the resulting asci produce one to four hat-shaped ascospores. The spores are liberated soon after formation. Ascospores were observed on 5% malt extract agar at 25''C, 5-15 days after pairing of complementary mating types.

309

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Fermentation:

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

+ +

Starch formation Gelatin liquefaction Growth at 37°C

Co-Q: 9, CBS 2082 (Yamada et al. 1973a). Mol% G + C: 44.4, 44.6 CBS 2021, CBS 2082 {T^: Nakase and Komagata 1970b); 44.4, CBS 2030 (BD: Fuson et al. 1980).

Origin of the strains studied: Frass of American elm {Ulmus americana), U.S.A. (1); alcohol strain, Argentina (1); frass, Balsam fir (Abies balsamea), U.S.A. (1); frass, spruce (Picea excelsa), Germany (1); sputum (1); blood (1); atmosphere (1); unknown substrates received from Castellani (2), Langeron (1), Mackinnon (1). Complementary mating types: NRRL Y-2075 (CBS 2030) and NRRL Y-2076 (CBS 2031). Type strain: CBS 2030 (NRRL Y-2075), from Ulmus americana.

tapered. Pseudohyphae are common and moderately branched. True hyphae are not formed. Growth on the surface of assimilation media: Pellicles are not formed, but a thin ring of surface growth may be present. Dalmau plate culture on morphology agar: After 7 days at 25^C, growth under the coverglass shows only sparse formation of pseudohyphae and no true hyphae. Aerobic growth is tannish-white, slightly glistening and butyrous. A faint ester-like odor is present. Formation of ascospores: Asci (3.0-5.0)x(5.0-6.5) |im form from vegetative cells following conjugation between a parent cell and its bud. Generally, the asci arise from budded yeast cells, but occasionally pseudohyphal cells also serve as asci. Asci are deliquescent. Ascospores are hat-shaped, (1.0-1.4)x(1.5-2.3)jim, with one to four per ascus. Single-spore isolates from four-spored asci form ascosporogenous colonies demonstrating the species to be homothallic. Ascospores are abundant on 5% malt extract and YM agars after 3-5 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

+ + + + s -

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s +

+/w

Comments: Wickerham and Burton (1954b) discovered ascosporulation in strains of Candida guilliermondii var. s guilliermondii and tentatively named the sexual state Endomycopsis guilliermondii. Wickerham (1966) later validated the ascosporic state as Pichia guilliermondii. Only Additional assimilation tests and other growth a small minority of natural isolates of C. guilliermondii characteristics: Starch formation are sexually reactive (Wickerham and Burton 1954b), and 2-Keto-D-gluconate 5-Keto-D-gluconate Gelatin liquefaction the type strain was not among them. Kurtzman (1992b) Saccharate Growth at 'iTC showed 98% nDNA complementarity between type strains 10% NaCl/5% glucose of C. guilliermondii and P. guilliermondii, thus confirmingCo-Q: Not determined. Mol% G + C: 39.3, CBS 7208 (BD: Kurtzman 1987a). the expected anamorph-teleomorph connection. Origin of the strain studied: NRRL YB-4128 is the 42.36. Pichia hampshirensis Kurtzman (1987a) only known strain of this species and was isolated in Growth on 5% malt extract agar: After 3 days 1956, by L.J. Wickerham from the frass of a dead, cut oak at 25°C, the cells are single or in pairs, spheroidal (Quercus sp.) at Camp Sargent, New Hampshire, U.S.A. Type strain: CBS 7208 (NRRL YB-4128). to ellipsoidal, (2.5-5.0)x(2.7-6.9)|im, and occasionally

310

Vb. Descriptions of teleomorphic ascomycetous genera and species

42.31. Pichia haplophila Shifrine & Phaff (1956) Synonym: Yamadazyma haplophila (Shifrine & Phaff) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (1.5-4.2)x (2.5-8.0) [xm, and occur singly, in pairs or in small clusters. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Dry, climbing pellicles are present. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows occasional rudimentary pseudohyphae. True hyphae are not formed. Aerobic growth is butyrous with a dull, tannish-white almost powdery surface. The margin is finely lobed. A faint acidic odor may be present. Formation of ascospores: Asci show conjugation between a cell and its bud or infrequently between independent cells. Two to four hat-shaped ascospores are formed by each ascus, and they are readily liberated. The predominance of conjugations between cells and their buds in ascosporogenous cultures suggests this species to be homothallic. Ascospores were observed on 5% malt extract agar after 3-5 days at 25°C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

42.38. Pichia heedii Phaff, Starmer, Miranda & M.W. Miller (1978b) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (1.8^.l)x(3.0-6.8) jim, and occur singly, in pairs or in short chains. Growth is butyrous and cream colored. Growth on the surface of assimilation media: Thin, climbing pellicles are present. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows rudimentary pseudohyphae but no true hyphae. Aerobic growth is dull, smooth, white in color, butyrous, and has a finely serrate margin. A faint acidic odor is present. Formation of ascospores: This species is heterothallic, but only diploid strains have been isolated from nature. Vegetative cells are transformed into asci which produce two to four hat-shaped ascospores. Asci are deliquescent. Ascospores were observed on 5% malt extract agar after 3-5 days at 25°C. Fermentation: absent. Assimilation:

+ + V

-

+ + V

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

ws

-

+ + + + + + +

V

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation + Gelatin liquefaction 5 -Keto-D-gluconate w/Growth at 37°C Saccharate 10% NaCl/5% glucose

work (Shifrine and Phaff 1956, Kreger-van Rij 1970c) except that L-sorbose assimilation was either latent or variable in the present study.

+

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ s

V

+

V Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation Gelatin liquefaction 5-Keto-D-gluconate Growth at 3 7 T Saccharate + 10% NaCl/5% glucose -

Co-Q: 9, CBS 2028 (Yamada et al. 1973a). M o l % G + C: 39.0, 41.0, CBS 2028 {T^\ Nakase and Komagata 1970b; BD: Kurtzman, unpublished).

Co-Q: 7, CBS 6930 (Billon-Grand 1985). M o l % G + C: 32.3-32.7, CBS 6930 and 5 additional strains (BD: Phaff et al. 1978b).

Origin of the strains studied: From the bark beetle Dendroctonus jeffreyi, U.S.A. (1); orchard soil, Japan (1). Type strain: CBS 2028 (NRRL Y-7860), from Dendroctonus jeffreyi. Comments: Results are in good agreement with previous

Origin of the strains studied: From senita cactus (Lophocereus schottii), Baja California Sur, Mexico (1); saguaro cactus (Carnegiea gigantea), Arizona, U.S.A. (1). Complementary mating types: NRRL Y-10968

311

42. Pichia B.C. Hansen emend. Kurtzman / C.R Kurtzman

(CBS 6931) and NRRL Y-10969 (CBS 6932), both derived from the sporogenous diploid type culture. Type strain: CBS 6930 (NRRL Y-10967). Comments: Phaff et al. (1978b) reported P. heedii to be isolated only from two species of cacti belonging to the subtribe Pachycereinae, senita {Lophocereus schotti) and saguaro (Carnegiea gigantea), and their associated Drosophila species, D. pachea and D. nigrospiracula, respectively. It was later found (Starmer et al. 1980, Holzschu and Phaff 1982) that the strains from senita utilize citrate whereas those isolated from saguaro do not. The two metabolic types have greater than 95% nDNA complementarity, and mating between the two types produces four-spored asci that segregate 2:2 with respect to citrate utilization, indicating control by a single genetic locus. P. heedii may be separated from P amethionina, P cactophila, P pseudocactophila and P opuntiae by its strong assimilation of D-xylose. Starmer et al. (1979) observed no mating among P heedii, P amethionina and P opuntiae. P. heedii may be separated from P membranifaciens on the basis of its failure to assimilate A/^-acetyl-D-glucosamine, its smaller cell size, comparatively slower release of ascospores and higher maximum growth temperature. The 10% difference in G + C contents between these two phenotypically similar species would preclude conspecificity. 42.39. Pichia heimii Pignal (1970) Growth on 5% malt extract agar: After 3 days at 2 5 T , the cells are ovoidal, (2.0^.2)x(3.0-6.0) [xm, and occur singly and in pairs. Growth is tannish-white and smooth to somewhat convoluted. Growth on the surface of assimilation Moderately thick pellicles are formed.

media:

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, moderately branched pseudohyphae with large clusters of blastoconidia. True hyphae are not formed. Infrequently, a pseudohyphal cell will be found which contains up to six endospores. Aerobic growth is tannishwhite, glistening, smooth to slightly convoluted, and with a sparingly lobed margin. A faint acidic odor is present. Formation of ascospores: Spores were not observed in the present study. Pignal (1970) reported the asci to arise from conjugation between independent cells or, less frequently, from conjugation between a cell and its bud. One to four hat-shaped ascospores were formed in each ascus, and they were liberated soon after formation.

Fermentation:

Glucose Galactose Sucrose Maltose

+ + + w/-

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 39.7, CBS 1981).

+ +

Starch formation Gelatin liquefaction Growth at 37T

6139 (T;^ J.B. Fiol, cited by Billon-Grand

Origin of the strain studied: Decaying, insect-invaded wood, Equatorial Africa. Type strain: CBS 6139 (NRRL Y-7502). Comments: The results of the present study are in agreement with the original description except that Pignal (1970) reported a weak fermentation of raffinose and weak growth on L-sorbose, which were not detected. 42.40. Pichia henricii (Wickerham) Kurtzman (1984a) Synonyms: Hansenula henricii Wickerham (1969b) Ogataea henricii (Wickerham) Y. Yamada, Maeda & Mikata (1994c)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal or ellipsoidal, (3.15.4)x(3.4-7.5)|im, and occur singly, in pairs, and in small clusters. Growth is butyrous and tannish-white in color. Growth from some single-ascospore isolates can be mucoid. Growth on the surface of assimilation Neither pellicles nor rings are produced.

media:

Dalmau plate culture on morphology agar: After 7 days at IS^'C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Occasional short chains of cells are observed. Aerobic growth is tannish-white, smooth, faintly glistening, and butyrous. Colony margins are entire. Formation of ascospores: Asci may be unconjugated or arise from conjugation between independent cells or a parent cell and its bud. Ascospores are hat-shaped and

Vb. Descriptions of teleomorphic ascomycetous genera and species

312

the asci are deliquescent. Usually only two spores are formed per ascus on YM- or 5% malt extract agar, but on morphology agar, three- or four-spored asci are common. The species apparently is homothallic because singlespore isolates from four-spored asci give ascosporogenous colonies (Kurtzman, unpublished). Ascospores were observed on YM, 5% malt extract, and yeast morphology agars after 10-20 days at 25°C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

w + + + +

-

+ +

-

+ w/-

-

V

-

+

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction +/w 5-Keto-D-gluconate Growth at 37T + Saccharate w/10% NaCl/5% glucose Co-Q: 7, CBS 5765 and 2 additional strains (Yamada et al. 1973a). Mol% G + C: 49.8-50.2, CBS 5765, AJ 5164, AJ 5165 {T^: Nakase and Komagata 1971b); 49.6, CBS 5765 (BD: Fuson et al. 1979).

Origin of the strains studied: Bird (?) feces collected in the Medicine Bow Mountains, Wyoming, U.S.A. (1); frass from a lodgepole pine (Pinus contorta Douglas) collected near Markleeville, California, U.S.A. (1); soil, Medicine Bow Mountains, Wyoming (1). Type strain: CBS 5765 (NRRL YB-2194), from bird (?) feces. Medicine Bow Mountains, Wyoming.

42.41. Pichia holstii (Wickerham) Kurtzman (1984a) Anamorph: Candida silvicola Shifrine & PhafF Synonyms: Hansenula holstii Wickerham (1960) Nakazawaea holstii (Wickerham) Y. Yamada, Maeda & Mikata (1994c) Candida silvicola Shifrine & Phaff (1956)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ellipsoidal to elongate, (1.7-4.0) x (2.16.9) |im, and single, in pairs, or in small clusters. Growth is mucoid to butyrous and white in color.

Growth on the surface of assimilation media: Infrequently, thin pellicles or rings may be formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and well-branched pseudohyphae as well as true hyphae. Aerobic growth is white to tannish-white, dull to glistening, and mucoid to butyrous. Colony margins are entire or lobed and generally bordered by pseudohyphae and true hyphae. Freshly isolated strains sometimes have cells that produce tapered outgrowths at one or both ends. The outgrowths may attain a length of several times that of the main portion of the cell. A faint ester-like odor is produced. Formation of ascospores: P holstii is heterothallic, and only asporogenous haploid strains have been isolated from nature. Asci are formed following conjugation of complementary mating types, and they contain two to four hat-shaped ascospores. The asci are deliquescent. Many natural isolates lack mating competence or show a very weak reaction (Wickerham 1960, Kurtzman et al. 1973a). Following mixture of complementary mating types, 2 or 3 weeks may pass before conjugants are observed. Few isolates from frass of Pinus show mating competence, but a much higher percentage of isolates from gums of Prunus spp. are sexually reactive. Herman (1971a) reported increased mating frequency and increased sporulation in shaken cultures employing a minimal medium developed to enhance extracellular polymer production (Slodki et al. 1972). Ascospores were observed at 25°C on 5% malt extract agar and in shaken cultures of polymer production medium, sometimes after only 5-10 days. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w/-

-

+ + + + + + +

-

+

-

+ + + + + + +

Lactose Raffinose Trehalose

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

+

-

+ + V

+ V

+ + + + V

-

+ +

-

+

-

313

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

v V -+/w

Starch formation Gelatin liquefaction Growth at 37°C

w/V

Co-Q: 8, CBS 4140, CBS 4069 (Yamada et al. 1973a). Mol% G + C: 36.8, 37.1, CBS 4140 {T^: Nakase and Komagata 1971b; BD: Kurtzman, unpublished).

Origin of the strains studied: Several genera of coniferous and broadleaf trees from throughout the U.S. and Canada as well as from lichens, soil, lakes, and streams (154); cadaver (1). Complementary mating types: NRRL Y-2154 (CBS 4141) and NRRL Y-2155 (CBS 4140). Type strain: CBS 4140 (NRRL Y-2155), isolated by Wickerham (1960) from frass of an apparent yellow spruce {Picea rubensl) from the Gaspe Peninsula, Canada. Comments: As with P. capsulata, R holstii produces large quantities of extracellular polysaccharides. Slodki and coworkers (Slodki et al. 1972, Seymour et al. 1976) have shown the mannans and phosphomannans of these two species to be different. 42.42. Pichia inositovora Golubev & Blagodatskaya (Golubev et al. 1981) Synonym: Yamadazyma inositovora (Golubev & Blagodatskaya) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are short ovoidal to elongate, (2.14.5) X (2.5-7.6) jjim, and single or infrequently in pairs. Colonies are butyrous, glistening and tannish-white. Growth on the surface of assimilation media: Thin climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is tannish-white, glistening, butyrous, and low convex in profile with a depressed center. Colony margins are entire to infrequently lobed. A faint musky-acidic odor is produced. Formation of ascospores: Asci are unconjugated and form one to four hat-shaped ascospores that are released at maturity (Fig. 139). It is not known whether the species is homothallic or heterothallic. Golubev et al. (1981) observed from transmission electron microscopy that bulb-like structures sometimes form on the brims of ascospores.

Fig. 139. P. inositovora, CBS 8006. Ascosporogenous culture after 3 weeks, IS^'C, on YM agar. Bar = 5 |im.

Ascospores were observed on YM and 5% malt extract agars after 2-3 weeks at 15°C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 + + + + + + + 1 -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 1)TQ 10% NaCl/5% glucose Co-Q: 9, CBS 8006 (Billon-Grand 1985). Mol% G + C: 49.9, CBS 8006 (BD: Kurtzman, unpublished).

-

Origin of the strain studied: The only known strain of this species was isolated from highmoor peat in the Moscow region, Russia. Type strain: CBS 8006 (IBPhM Y-888, NRRL Y-12698). Comments: Results from the present study are in agreement with the original description. The only exception was lactate assimilation, which was absent in the present examination but reported to be positive but slow by Golubev et al. (1981). i? inositovora is one of only a few

314

Vb. Descriptions of teleomorphic ascomycetous genera and species

ascomycetous yeasts that assimilate /-inositol as a carbon source. 42.43. Pichia jadinii (A. & R. Sartory, Weill & J. Meyer) Kurtzman (1984a) Anamorph: Candida utilis (Henneberg) Lodder & Kreger-van Rij Synonyms: Saccharomyces jadinii A. & R. Sartory, Weill & J. Meyer (1932) Hansenula jadinii (A. & R. Sartory, Weill & J. Meyer) Wickerham (1951) Torula utilis Henneberg (1926) Torulopsis utilis (Henneberg) Lodder (1934) Cryptococcus utilis (Henneberg) Anderson & Skinner (1947) Candida utilis (Henneberg) Lodder & Kreger-van Rij (1952) ITorula mineralis Hayduck & Haehn ex EC. Harrison (1928) Candida guilliermondii (Castellani) Langeron & Guerra var. nitratophila Diddens & Lodder (1942) Torulopsis utilis (Henneberg) Lodder var. major Thaysen & Morris (1943)

Growth on 5% malt extract agar: After 3 days at 25T, the cells are ellipsoidal to elongate, (2.5-8.0) x(4.111.2) |im, and occur singly or in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Thin pellicles may form infrequently on some media. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows occasional pseudohyphae and these may be highly branched. True hyphae are not produced. Aerobic growth is white to tannish-white, smooth, glistening, and butyrous. Colony margins are entire or infrequently lobed. A faint ester-like odor may be produced. Formation of ascospores: P. jadinii forms one to four hat-shaped ascospores in unconjugated deliquescent asci (Fig. 140). Kurtzman et al. (1979) showed that single-spore isolates from the type strain either sporulated no better than the parent or not at all. Because the parent culture sometimes failed to sporulate and because mixtures of asporogenous single-spore isolates did not sporulate, it was concluded that P jadinii is homothallic. '^^%^

MM&Srp^ Fig. 140. P. jadinii, CBS 1600. Ascosporogenous culture after 2 weeks, 25°C, on a carrot wedge. Bar = 5 |im.

Ascospores were observed on 5% malt extract agar and on sterilized carrot slices after 10-30 days at 25''C. Fermentation: + Glucose Lactose Galactose Raffinose w Sucrose + Trehalose Maltose Assimilation: Glucose + A/^-Acetyl-D-glucosamine Galactose Methanol L-Sorbose Ethanol + -

Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

-

+ + +/w

-

+

Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+ + + + + + + +

+ + Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate w/Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at ST^'C + 10% NaCl/5% glucose Co-Q: 7, CBS 1600 (Yamada et al. 1973a). Mol% G + C: 43.2, CBS 1600 (7^,: Nakase and Komagata 1971b); 45.1^5.8, CBS 1600, 5609, 621 (BD: Kurtzman et al. 1979).

Origin of the strains studied: Pus from a human abscess (1), the udder of a cow with mastitis (1), industrial fermentations (4). Type strain: CBS 1600 (NRRL Y-1542), isolated by Sartory et al. (1932) from the pus of a human abscess. Comments: Candida utilis had been proposed as the asexual state of P jadinii because of phenotypic similarities (Wickerham 1970a). DNA reassociation studies demonstrated that C utilis and P jadinii share 85% common base sequences (Kurtzman et al. 1979). These data, confirmed by Manachini (1979), show C. utilis to be the anamorphic form of P jadinii. By contrast, P petersonii showed only 9% DNA relatedness with C. utilis and P jadinii and, therefore, must be considered a separate species. The possibilities of growing C. utilis (Torula yeast) as a foodstuff on a commercial scale were first recognized by German workers in Berlin at the Institut fiir Garungsgewerbe during World War I (Lindner 1922, as cited by Pyke 1958). Because C utilis is capable of utilizing pentoses, pulping-waste liquors from the paper industry have been used for about four decades as an economical substrate for culturing this yeast. The general acceptance of C. utilis by the food and feed industries

42. Pichia E. C. Hansen emend. Kurtzman / C.P. Kurtzman

as a safe and nutritious form of single-cell protein has made it an important species for cultivation on other types of biological wastes. Because of its importance to the food industry, the habitats of P. jadinii and C. utilis deserve further comment. One of the two known strains of R jadinii was isolated from abscesses of a young woman and the second strain was obtained from a localized infection in a cow C. utilis has been isolated from flowers and as a contaminant in industrial fermentations, but also from human and animal sources. In view of this, strains of C utilis that have a long history of safety need to be used when Torula yeast is produced. Three strains of C. utilis used commercially since at least the mid1940's are NRJIL Y-900 (CBS 5609), NRRL Y-1082 (CBS 1517), and NRRL Y-1084 (CBS 841). 42.44. Pichia japonica Kurtzman (1987a) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.25.0)X(2.8-8.5) jjim, and single or in pairs. Branched pseudohyphae are present, but true hyphae are not formed. Growth on the surface of assimilation media: Pellicles are not formed, but a thin ring of surface growth may be present. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows moderately branched pseudohyphae with straight or curved cells. True hyphae are not present. Aerobic growth is grayishwhite, glistening, butyrous to slightly mucoid and fringed with pseudohyphae. A faint ester-like odor is present. Formation of ascospores: Asci (3.0^.0)x(4.5-7.0) jim form from vegetative cells following conjugation between a parent cell and its bud. Asci arise from budded yeast cells or occasionally from pseudohyphal cells. The asci are deliquescent. Ascospores are hat-shaped and one to four occur in each ascus (Fig. 141). Single-spore isolates from four-spored asci give ascosporogenous colonies indicating the species to be homothallic.

c^

u

X\

^^^°i

0 O ^

\

A

Fig. 141. P. japonica, CBS 7209. Ascosporogenous culture after 3 days, 25°C, on 5% malt extract agar. Bar = 5 ^xm.

315

Ascosporulation is abundant on 5% malt extract agar and only slightly less so on YM agar, after 7-10 days at 25T.

Fermentation: Glucose Galactose Sucrose Maltose

+/w

-

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + +

-

+

-

+

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

V

+ + + + +/w + + +/w

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction w Saccharate Growth at 37°C + 10% NaCl/5% glucose Growth at 4 0 T + Co-Q: Not determined. M o l % G + C: 46.4-46.7, CBS 7209, 7210, 7211, 7212 (BD: Kurtzman 1987a).

Origin of the strains studied: All four known strains of this species [NRRL YB-2750 (CBS 7209), YB-2751 (CBS 7210), YB-2752 (CBS 7211) and YB-2753 (CBS 7212)] were isolated in 1951 by LJ. Wickerham from a frass sample from fir {Abies firma) sent by the Ministry of Agriculture and Forestry, Tokyo, Japan. Type strain: CBS 7209 (NRRL YB-2750) Comments: Comparisons of nDNA complementarity between P. japonica, P hampshirensis and other phenotypically similar species of Pichia and Candida showed P japonica to be a genetically distinct species (Kurtzman 1987a). 42.45. Pichia kluyveri Bedford ex Kudryavtsev (1960) This species has three varieties: Pichia kluyveri Bedford ex Kudryavtsev (1960) var. kluyveri (1987) Synonyms: Pichia kluyveri Bedford (1942) nom. nud. Hansenula kluyveri (Bedford) Kudryavtsev (1960) Pichia belgica (Lindner) Dekker var. microspora Negroni & Fischer (1941) nom. nud.

316

Vb. Descriptions of teleomorphic ascomycetous genera and species

Pichia kluyveri van cephalocereana Phaff, Starmer & Assimilatioi i : Glucose Tredick-Kline (1987b) Pichia kluyveri van eremophila Phaff, Starmer & Tredick-Kline (1987b) Anamorph: Candida eremophila PhafF, Starmer & Tredick-Kline Synonym: Candida eremophila Phaff, Starmer & Tredick-Kline (1987b)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are ovoidal to elongate, (2.0-5.5)x(4.011.0)pim, and occur singly, in pairs, or in short chains. Growth is yellowish-tan, dull and with fine wrinkles. Growth on the surface of assimilation media: Dry, climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows moderately well-branched pseudohyphae, but they produce few blastoconidia. True hyphae are not formed. Aerobic growth is tannish-white, dull, sometimes almost powdery, and with fine striations radiating from center to colony edge. Margins are entire to finely serrate. Formation of ascospores: Two to four hat-shaped spores are produced in each ascus, and they are released very soon after formation (Fig. 142). Phaff et al. (1987b) reported that most strains are heterothallic but some, including the two-spored strains, appear homothallic.

^-^If ^^ ^ ^

S

Fig. 142. P. kluyveri var. kluyveri, CBS 1525. Ascosporogenous culture after 3 days, 25°C, on YM agar. Bar = 5 [im.

Ascospores were observed on McClary's acetate, YM and 1% malt extract agars, usually after 5-15 days at 25^C. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

V

-

s

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s

-

+ +

-

+/w +/w w/-

-

Additional assimilation tests and other g rowf characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction w/5-Keto-D-gluconate Growth at 2>TC V Saccharate -

10% NaCl/5% glucose + Co-Q: 7, AJ 4139, AJ 4145 (Yamada et al. 1973a). Mol% G + C: 28.3-28.5, AJ 4145, AJ 4426, var. kluyveri (T^: Nakase and Komagata 1970b); 29.4-31.4, CBS 188 and 7 additional strains, var. kluyveri (BD: Phaff et al. 1987b); 29.9-30.5, CBS 7273 and 3 additional strains, var. cephalocereana (BD: Phaff et al. 1987b); 29.8-30.8, CBS 7272 and 3 additional strains, var. eremophila (BD: Phaff et al. 1987b); 29.4-30.4, CBS 7271 and 3 additional strains, Candida eremophila (BD: Phaff etal. 1987b).

Supplementary description of P. kluyveri varieties: Variety kluyveri: glucose fermentation is strong; citrate assimilation is weak or absent: killer activity against Candida glabrata; rare in cacti, common in rotting fruit of other plants (Phaff et al. 1987b, Starmer et al. 1992). Variety cephalocereana: glucose fermentation is slow and usually late; citrate is assimilated; no killer activity against C glabrata; from columnar cacti on the Caribbean island of Montserrat (Phaff et al. 1987b). Variety eremophila: glucose fermentation is weak or absent; citrate is assimilated; killer activity against C. glabrata', nearly exclusive to Opuntia cactus rots in southern Arizona and Texas (Phaff et al. 1987b). Origin of the strains belonging to the variety kluyveri: Olives, Bedford {\)\ R belgica var. microspora (CBS 1358), P. Negroni; tropical products (1); fermenting cacao (2); Drosophila sp. from tomato (2); prickly pear cactus {Opuntia stricta) (2). Complementary mating types: CBS 7907 [SU (Syracuse University) 84-670.2B, NRRL Y-17734 (/?+)] and CBS 7908 [SU 84-670.2C, NRRL Y-17752 ( r ) ] . Type strain: CBS 188 (NRRL Y-11519), from olives. Origin of the strains belonging to the variety cephalocereana: Rots of columnar cactus (Cephalocereus royenii), island of Montserrat (2).

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

317

Complementary mating types: CBS 7909 [SU 82- maturity. Van der Walt et al. (1982) reported the species 555B.17, NRRL Y-17718 (/?+)] and CBS 7910 [SU 82- to be homothallic. 556D.30, NRRL Y-17738 ( r ) ] . Ascosporulation was observed on YM and 5% malt Type strain: CBS 7273 (SU 82-555B, NRRL Y-17225). extract agars after 5-7 days at 25°C. Origin of the strains belonging to the vari- Fermentation: ety eremophilai Rots of prickly pear cacti: Opuntia Glucose s Lactose Raffinose phaeacantha, southern Arizona, USA (1); Opuntia sp., Galactose Trehalose Baja California, Mexico (1). Rotting organ pipe cactus Sucrose (Stenocereus thurberi), Baja California, Mexico (1); type Maltose strain of Candida eremophila (CBS 7271, UCD-FST 76- Assimilation: Glucose + A/^-Acetyl-D-glucosamine 202B, NRRL Y-17226). Methanol ws Complementary mating types: CBS 7906 [SU 83- Galactose V Ethanol L-Sorbose ws 466.1AC, NRRL Y-17753 (h^)] and CBS 7905 [SU 86- Sucrose Glycerol + 541.5A, NRRL Y-17751 (h')]. Maltose Erythritol + Type strain: CBS 7272 (SU 83-466.1, NRRL Y-17224), Cellobiose + Ribitol + Trehalose Galactitol from Opuntia phaeacantha. Lactose + D-Mannitol Comments: Following an extensive survey of the yeast Melibiose D-Glucitol + flora of rotting cacti, Phaff et al. (1987b) demonstrated Raffinose a-Methyl-D-glucoside three genetically divergent populations among isolates of Melezitose Salicin + D-Gluconate w/P. kluyveri. Nuclear DNA relatedness within populations Inulin Soluble starch DL-Lactate was high, but intergroup nDNA relatedness ranged D-Xylose s Succinate s from 66-72%. A majority of the strains that produced L-Arabinose V Citrate four-spored asci from each of the populations was D-Arabinose Inositol demonstrated to be heterothallic through single-ascospore D-Ribose s Hexadecane Nitrate isolations. Fertility of progeny from intergroup crosses L-Rhamnose Vitamin-free appeared somewhat diminished. Because of reduced D-Glucosamine nDNA relatedness and reduced fertility between the Additional assimilation tests and other g;row groups, Phaff et al. (1987b) proposed that the groups characteristics: Starch formation represented taxonomic varieties. A fourth group of strains 2-Keto-D-gluconate Gelatin liquefaction that was isolated from Stenocereus rots had high nDNA 5-Keto-D-gluconate Growth at 2>TC w relatedness with the variety eremophila but failed to Saccharate 10% NaCl/5% glucose show any mating response. This group was described Co-Q: 7, CBS 7081 (Billon-Grand 1985). as Candida eremophila. Separation of P. kluyveri var. Mol% G + C: Not determined. eremophila from P. galeiformis and P. membranifaciens is Origin of the strain studied: CBS 7081 (NRRL discussed in the Comments section of the latter species. Y-17234), from insect infestations of spurge {Euphorbia 42.46. Pichia kodamae van der Walt & Yarrow (van ingens), Groblersdal district, South Africa. Type strain: CBS 7081. der Walt et al. 1982) Synonym: Comments: Methanol assimilation by P. kodamae Ogataea kodamae (van der Walt & Yarrow) Mikata & Y. Yamada appears somewhat variable. In the original description, (1995) van der Walt et al. (1982) reported methanol not to Growth on 5% malt extract agar: After 3 days at be assimilated, whereas Barnett et al. (1990) reported 25°C, the cells are spheroidal, ellipsoidal or infrequently a delayed assimilation of this compound. In the present elongate, (1.5-5.6)x(1.5-6.3)(a.m, and single, in pairs or in small clusters. Growth is mucoid, glistening and study, growth on methanol was weak and slow Van der Walt et al. (1982) noted P kodamae to be tannish-white. phenotypically similar to P. methanolica and P. pini. Their Growth on the surface of assimilation media: attempts to induce mating between auxotrophic mutants Pellicles are not formed. of P. kodamae and the other two species failed, which Dalmau plate culture on morphology agar: After suggested P. kodamae to be a separate species. 7 days at 25°C, growth under the coverglass is devoid of either pseudohyphae or hyphae. Aerobic growth is 42.47. Pichia lynferdii (van der Walt & tannish-white, mucoid, glistening, convex in profile and E. Johannsen) Kurtzman (1984a) with an entire margin. A musky, acidic odor is present. Synonyms: Formation of ascospores: Asci may be unconjugated or Hansenula lynferdii van der Walt & E. Johannsen (1975b) show parent cell-bud conjugation. The asci produce one Candida lynferdii van der Walt & E. Johannsen (1975b) to four hat-shaped ascospores and become deliquescent at Growth on 5% malt extract agar: After 3 days

318

Vb. Descriptions of teleomorphic ascomycetous genera and species

at 25°C, the cells are spheroidal to ellipsoidal, (2.15.8)x(2.7-7.5)|im, and single or in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Thin creeping pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows occasional moderately well-developed pseudohyphae. True hyphae are not formed. Aerobic growth is tannish-white, slightly glistening, and butyrous. Colony margins are entire to finely lobed. A faint acidic odor is produced. Formation of ascospores: Asci are unconjugated and arise directly from vegetative cells. There are one to four hat-shaped ascospores per ascus, and asci are deliquescent. Van der Walt and Johannsen (1975b) reported that heat-treatment of sporogenous cultures gave only sporogenous colonies suggesting the species to be homothallic. Ascospores were observed on YM, 5% malt extract and V8 agars after 5-7 days at 25"C. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raflfinose Trehalose

Assimilation: A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

+

Starch formation Gelatin liquefaction Growth at 3 7 T

Co-Q: Not determined. Mol% G + C: 39.3, CBS 6695 (HPLC: Miller and Baharaeen 1979).

Origin of the strain studied: The only known strain of this species was recovered from uncultivated grassland soil collected near Pretoria, South Africa. Type strain: CBS 6695 (NRRL Y-7723), isolated from soil in South Africa and received from van der Walt. Comments: Pichia lynferdii shares many characteristics

with R jadinii and R petersonii including a tolerance to embalming fluid (van der Walt and Johannsen 1975b). The three species can be separated by their assimilation reactions on L-rhamnose, galactose, and erythritol. Van der Walt and Johannsen (1975b) reported R lynferdii to give slow, weak growth on L-arabinose, but in the present study, no growth was detected on this compound. 42.48. Pichia media Boidin, Pignal, Lehodey, Vey & Abadie (1964) Synonym: Yamadazyma media (Boidin, Pignal, Lehodey, Vey & Abadie) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are ovoidal, (1.9-3.5)x(3.0-5.5) jim, and occur singly or in pairs. Growth is yellowish-white, smooth, dull-glistening, and butyrous. Growth on the surface of assimilation media: Pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is light tannish-white, smooth, or with minute striations, dullglistening, butyrous, and with a smooth to finely lobed margin. Formation of ascospores: Conjugation between parent cell and bud or occasionally between independent cells precedes ascus formation. Asci contain one to four hat-shaped ascospores which are liberated soon after formation. Based on manner of conjugation, it is expected that this species is homothallic. Ascospores were observed on 5% malt extract agar after 5-10 days at 25^C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + w/+ + + + w/-

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC 10% NaCl/5% glucose + Co-Q: 9, CBS 5521 (Billon-Grand 1985). Mol% G + C: 36.1, CBS 5521 (7;^: I B . Fiol, cited by Billon-Grand 1981).

Origin of the strains studied: Xylophagous insect larvae, France (2). Type strain: CBS 5521 (NRRL Y-7122). Comments: Kreger-van Rij (1970c) noted some inconsistencies in assimilation between her tests and those of the original description. In turn, some differences with her results were found in the present study. This may reflect differences in the purity of the carbon compounds used or more likely variability within P. media itself. In contrast to the 1970 study, assimilation of soluble starch was negative or weak, L-arabinose was positive rather than variable, D-ribose was positive but sometimes slow, D-arabinose was positive rather than variable, and galactitol was variable rather than negative. 42.49. Pichia membranifaciens^ (E.C. Hansen) E.C. Hansen (1904) Anamorph: Candida valida (Leberle) van Uden & H.R. Buckley, on the basis of phenotypic similarity. Synonyms: Saccharomyces membranifaciens (as S. membranaefaciens) E.C. Hansen (1888a) 1 Saccharomyces pyriformis Ward (1892) Saccharomyces anomalus E.C. Hansen var. belgicus Lindner (1895) '^Saccharomyces hyalosporus Lindner (1901) 1 Pichia hyalospora (Lindner) E.C. Hansen (1904) Willia belgica Lindner (1905a) Hansenula belgica (Lindner) H. & P. Sydow (1919) Endomyces belgica (Lindner) Zender (1925b) Pichia belgica (Lindner) Dekker (Stelling-Dekker 1931) Pichia membranaefaciens E.C. Hansen var. belgica (Lindner) K. Kodama, Kyono & S. Kodama (1955) Mycoderma valida Leberle (1909) Mycokluyueria ualida (Leberle) Ciferri & Redaelli (1947) Mycoderma decolorans Will (1910) Mycokluyueria decolorans (Will) Ciferri & Redaelli (1947) Saccharomyces mycoderma punctisporus Melard (1910) Pichia punctispora (Melard) Dekker (Stelling-Dekker 1931) Pichia alcoholophila Klocker (1912a) Pichia calliphorae Klocker (1912a) Pichia membranaefaciens E.C. Hansen var. calliphorae (Klocker) Dekker (Stelling-Dekker 1931) Mycoderma uanlaeriana Lindner & Genoud (1913) Candida krusei (Castellani) Berkhout var. uanlaeriana (Lindner & Genoud) Diddens & Lodder (1942) Pichia mandshurica Saito (1914) Pichia membranaefaciens E.C. Hansen var. mandshurica (Saito) K. Kodama, Kyono & S. Kodama (1955) Zygosaccharomyces cheualieri Guilliermond (1914) Zygopichia cheualieri (Guilliermond) Klocker (1924) Zygosaccharomyces bisporus Anderson (1917) Mycoderma tannica Asai (1918)

319

Mycokluyueria tannica (Asai) Ciferri & Redaelli (1947) Endomyces chodati Zender (1925a) Willia chodati (Zender) Guilliermond (1928) Pichia chodati (Zender) Dekker (Stelling-Dekker 1931) Endomyces trumpyi Zender & Bevan (Zender 1925a) Pichia chodati (Zender) Dekker var. trumpyi (Zender & Bevan) Dekker (Stelling-Dekker 1931) Willia trumpyi (Zender) Guilliermond (Stelling-Dekker 1931) Mycoderma lafarii Janke (1930) Mycokluyueria lafarii (Janke) Ciferri & Redaelli (1947) Pichia neerlandica Lodder (1932) Pichia alcoholophila Klocker var. naganishii Lodder (1932) Zygopichia guilliermondii Naganishi (1933) Pichia derossii Castelli (1935) nom. nud. Zygopichia chiantigiana Castelli (1938) Mycoderma uini-lafarii Zimmermann (1938) Pichia membranaefaciens E.C. Hansen var. acidificans Scrivani (1939) Pichia chodati (Zender) Dekker var. fermentans Mrak, Phaflf & Vaughn (1942b) Zygowillia chodati (Mrak, Phaff & Vaughn) Kudryavtsev (1960) 1Pichia fermentans var. rugosa Bedford (1942) nom. nud. Torulopsis californicus Mrak & McClung (1940) nom. nud. Cryptococcus californicus Mrak & McClung ex Anderson & Skinner (1947) 7Pichia pulque Guilliermond (Krasil'nikov 1954a) Zygopichia cheualieri (Guilliermond) Klocker var. andersonii Nickerson (1944b) Pichia siluestris Phaflf & Knapp (1956) Pichia membranaefaciens E.C. Hansen var. sicereum Santa Maria (1956c) Pichia indica Bahadur (1957) nom. nud. Pseudohansenula indica (Bahadur) Novak & Zsolt (1961) Pichia saccharophila Sasaki & Yoshida (1959) Pichia farinosa (Lindner) E.C. Hansen var. lodderi Negroni & Fischer, nom. nud.? (cited in Kreger-van Rij 1970c) Candida ualida (Leberle) van Uden & H.R. Buckley (1970) Pichia scaptomyzae C. Ramirez & Gonzalez (1984e) Pichia miyazi Mikata & Banno (1985) nom. nud.

Growth on 5% malt extract agar: After 3 days at 25T, the cells are ovoidal to elongate, (1.8-4.5) x(2.517.0) JLim, and occur singly, in pairs, in chains, or in clusters. Growth is yellowish-tan, dull and smooth or wrinkled. Growth on the surface of assimilation media: Dry, climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25*^0, growth under the coverglass generally shows moderately branched pseudohyphae, although some strains may form none. True hyphae are not produced. Aerobic growth is tannish-white, dull, smooth to wrinkled and with an irregular lobed margin. A faint acidic odor may be present. Formation of ascospores: Asci may be unconjugated or show conjugation between independent cells or between a parent cell and a bud. One to four ascospores are usually formed per ascus, but Santa Maria (1960, 1966) has observed as many as seven. Ascospores may be spheroidal or hemispheroidal and with or without a ledge (Figs. 143,

The original spelling of the species epithet membranaefaciens has been treated as an orthographic error.

320

Vb. Descriptions of teleomorphic ascomycetous genera and species

144). Ascospores with ledges may appear nearly hatshaped or nearly saturn-shaped. When viewed in the scanning electron microscope, it is not uncommon to find a single strain producing the whole range of spore shapes. Spores are generally liberated from the ascus. Single-spore isolates from four-spored asci show some cultures to be homothallic, but Slooff (1964) and Kreger-van Rij (1970c) clearly demonstrated other strains to be heterothallic. Of further interest was Kreger-van Rij's (1970c) observation of enhanced sporulation in certain self-sporulating strains following their conjugation with one or the other of the mating types. Ascospores were observed on YM, 5% malt extract, and V8 agars after 2-15 days at 2 5 T .

'%#

^%l %

Fermentation: Glucose Galactose Sucrose Maltose

w/-

-

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V

V

V

-

+ V

V V V

V

Additional assimilation tests and other g;rovi characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate

-

Starch formation Gelatin liquefaction Growth at 3 7 T

-

w/V

10% NaCl/5% glucose + Co-Q: 7, AJ 4110, AJ 4113, AJ 4140 (Yamada et al. 1973a). Mol% G + C: 41.5^2.4, IFO 0460 and 5 additional strains (7;„: Nakase and Komagata 1970b); 44.3, CBS 107 (BD: Phafif et al. 1976).

Origin of the strains studied: Grape must (1); wine (1); vineyard soil (2); beer (1); raw material for sorghum Fig. 143. /? membranifaciens, CBS 1329. Ascosporogenous culture after brandy (1); Iambic gueuse (1); feces (1); maize-cattle 12 days, 25''C, on YM agar. Bar = 5 p.m. waste fermentation (3); unknown substrates (9). Complementary mating types: CBS 5567 (NRRL Y-6775) and CBS 5568 (NRHL Y-6776), from Slooff (1964). Type strain: CBS 107 (NRRL Y-2026).

.^ A

Comments: Strains of P. membranifaciens show considerable variation in the amount of pseudomycelium produced, in the assimilation of several carbon compounds, in growth at 37°C and in their requirement for vitamins. However, there seems little correlation among the varying characteristics that would allow sub-grouping of the strains, and Kreger-van Rij (1970c) found mating between strains showing differences in one or more of these properties. Consequently, all of this phenotypic variation is considered typical for the species. Reliance on phenotypic characters for the separation of P. membranifaciens from P. galeiformis and P kluyveri var. eremophila will result in misidentification of some strains (Table 32). P kluyveri var. eremophila is not known outside cactus habitats, but P membranifaciens is cosmopolitan and the habitat range of P galeiformis Fig. 144. P. membranifaciens, CBS 1329. Scanning electron micrograph is insufficiently known. Strains that assimilate L-sorbose showing placement of ledges on ascospores to be satum-like, hat-like, can be identified as P membranifaciens, but the species or incomplete. Bar = 0.5^im.

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

321

is variable for this character. Heavily sporulated cultures Additional assimilation tests and other growth of R membranifaciens are unique among the three taxa characteristics: Starch formation because they produce a noticeable reddish-brown color, 2-Keto-D-gluconate Gelatin liquefaction w/but lightly sporulating strains cannot be discerned by this 5-Keto-D-gluconate Growth at 2>TC character. When strain identification is critical, molecular Saccharate 10% NaCl/5% glucose comparisons will be required. Co-Q: 7 and 8 (nearly equal amounts), CBS 6515, type strain of 42.50. Pichia methanolica Makiguchi (Kato et al. 1974) Synonyms: Pichia aganobii Urakami & Michimi (1977) nom. nud. Pichia cellobiosa J.-D. Lee & Komagata (1980b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (1.9-6.0) x(2.08.8) |im, and occur singly, in pairs or in clusters. Growth is cream-colored, smooth, glistening and butyrous. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is pale tannish-white, smooth, glistening and butyrous with an entire to lobed margin. Some strains produce a faint odor of esters. Formation of ascospores: Asci may show parent-bud conjugation or conjugation between independent cells. One to four hat-shaped spores are produced in each ascus, and the spores are freed soon after formation. Because conjugations between a cell and its bud are common in ascosporogenous cultures, this species appears to be homothallic. Ascospores were observed on 5% malt extract agar and Difco yeast morphology agar after 4-7 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

P methanolica (Lee and Komagata 1983); 7/8, CBS 8002, type strain of P. cellobiosa (Lee and Komagata 1980b). Mol% G + C: 36.9, CBS 8002 (7;^: Lee and Komagata 1980b); 36.4, CBS 6515 {T^\ Billon-Grand 1981).

Origin of the strains studied: Soil, Japan (7): P. methanolica CBS 6515 (type strain) and one additional strain; P cellobiosa CBS 8002 (type strain) and two additional strains; P aganobii CBS 8053 (representative Strain) and one additional strain. Type strain: CBS 6515 (NRRL Y-7685).

+ -

Lactose Raffinose Trehalose

+

Comments: Some differences were noted in the results obtained from fermentation and assimilation tests in the present study and those reported by Kato et al. (1974). In contrast to the original description, maltose was not fermented; however, L-sorbose and D-arabinose were assimilated, but citric and lactic acids were not utilized. Furthermore, growth was absent in vitaminfree medium. Kato et al. (1974) reported this species to be noteworthy because of its strong assimilation of methanol. Lee and Komagata (1983) demonstrated that the electrophoretic profiles of 13 cellular enzymes were identical for P methanolica and P cellobiosa and proposed the two taxa to be conspecific. Kurtzman (1992b) showed 100% nDNA complementarity between type strains of P methanolica and P cellobiosa providing additional evidence that the two represent a single species. In other nDNA comparisons, P aganobii showed 100% complementarity with P. methanolica (Kurtzman and Robnett, unpublished data).

+ +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

42.51. Pichia methylivora^ Kumamoto & Seriu (Kumamoto et al. 1986)

V

w/-

-

+ +

-

+ + +/w +

-

+ + + + + + + +

Anamorph: Candida cariosilignicola J.-D. Lee & Komagata Synonym: Candida cariosilignicola J.-D. Lee & Komagata (1980b)

+

Growth on the surface of assimilation media: Pellicles are not formed.

-

V V

+

-

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ellipsoidal, (1.33.5)x(1.9^.1)^m, and single or in pairs. Growth is mucoid, glistening and tannish-white.

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither pseudohyphae nor true hyphae, but occasional "tree-like" outgrowths of undifferentiated cells develop. Aerobic growth is tannish-white, glistening, mucoid and convex in

The original spelling of the species epithet methylooora has been treated as an orthographic error.

Vb. Descriptions of teleomorphic ascomycetous genera and species

322

profile with a smooth margin. A faint musky, acidic odor is present. Formation of ascospores: Ascospores were not observed in the present study. Kumamoto et al. (1986) presented photographs of hat-shaped ascospores and reported that two were produced per ascus on 5% malt extract agar after 7 days. Asci are deliquescent. It was not reported whether the species is homothallic or heterothallic. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

1 +

-

+

-

+

-

+ + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + +

Starch formation Gelatin liquefaction Growth at 37°C

+

-

+ +

-

+ +

-

+

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: 7 (Kumamoto et al. 1986). Mol% G + C: 35.8, CBS 7300 {T^\

Candida ueronae Florenzano ex van Uden & H.R. Buckley (1970) Candida entomaea van der Walt, D.B. Scott & van der Klift (1972)

Growth on 5% malt extract agar: After 3 days at 25^C, the cells are ovoidal to cylindroidal, (1.1-3.4) x (1.99.0) jim, and occasionally tapered or curved. The cells occur singly, in pairs, or in small clusters. Growth is butyrous, dull-glistening and tannish-white. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25*^0, growth under the coverglass shows numerous well-branched pseudohyphae with moderately abundant blastoconidia. True hyphae were not detected, but some of the pseudohyphae show almost no constriction at the septa. Aerobic growth is white, butyrous, and with a dull surface; the colonies are striated and with an irregular margin. There is a faint ester-like odor. Formation of ascospores: This species is heterothallic. Miranda et al. (1982) reported that following conjugation of complementary mating types the resulting zygote served as the ascus and that it is infrequent that diploid cells budded from the zygote undergo ascosporulation. Asci form one to four hat-shaped ascospores that are released at maturity. In the present study, conjugation was observed between complementary mating types, but ascospore formation was not detected. Miranda et al. (1982) noted that zygote formation and ascosporulation were infrequent events that most often occurred on 1-2% malt extract agar after 7-14 days.

Kumamoto et al. 1986).

Fermentation: Origin of the strains studied: CBS 7300 (NRRL Glucose Y-17250), isolated from a rotted tree, Iwate Prefecture, Galactose Japan; CBS 8001 (NRRL Y-11996), type strain of Sucrose Maltose Candida cariosilignicola, from decayed timber, Japan. Type strain: CBS 7300. Assimilation: Comments: Kumamoto et al. (1986) reported P. methyli- Glucose vora to ferment D-glucose, sucrose, trehalose and raffi- Galactose nose, but fermentation was not detected in the present L-Sorbose study. Kurtzman and Robnett (unpublished) found Can- Sucrose Maltose dida cariosilignicola and P. methylivora to have nearly Cellobiose identical nucleotide sequences in the variable 5' region of Trehalose the large subunit rRNA gene indicating the two taxa to be Lactose Melibiose conspecific. 42.52. Pichia mexicana Miranda, Holzschu, Phaff & Starmer (1982) Anamorph: Candida terebra Sugiyama & S. Goto Synonyms: Yamadazyma mexicana (Miranda, Holzschu, PhafF & Starmer) Billon-Grand (1989) Candida terebra Sugiyama & S. Goto (1969) Trichosporon ueronae Florenzano (1953) nom. nud.

Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w

+ +

-

+ + + + + w/+ +

-

+ + V

+ + +

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+

-

+ + + + V

+ + + + +

-

+ +

-

+

-

42. Pichia E. C. Hansen emend. Kurtzman / C.R Kurtzman

Additional assimilation tests and other growth characteristics:

323

produced by different strains range from faintly acid to faintly buttery.

2-Keto-D-gluconate s Starch formation 5-Keto-D-gluconate Gelatin liquefaction w Saccharate Growth at 37T + 10% NaCl/5% glucose + Co-Q: 9, CBS 7066 (Miranda et al. 1982). Mol% G + C: 42.2^2.5, CBS 7066 and 4 additional strains (BD: Miranda et al. 1982).

Formation of ascospores: This species is heterothallic but it has been isolated from nature only in the diploid form. Asci from diploid strains are unconjugated and produce one to four hat-shaped ascospores that are released soon after formation. Van der Walt (1982a) obtained complementary mating types by heat treatment Origin of the strains studied: CBS 7066 (UCD- of an ascosporogenous culture of the type strain. Mixtures FST 76-308A, NRRL Y-11818), from agria cactus {Steno- of complementary mating types are sexually agglutinacereus gummosus), Palmilla, Baja California Sur, Mexico; tive. CBS 7067 (UCD-FST 76-391B, NRRL Y-11819), from Ascosporulation was observed on 5% malt extract agar organ-pipe cactus (Stenocereus thurberi), Rancho Cuiiaiio, after 3 days at 25T. Baja California Sur; CBS 6023 (NRRL Y-17683), type Fermentation: strain of Candida terebra, from soil, Japan; CBS 5815 Glucose + Lactose (NRRL Y-17672), type strain of Candida ueronae, from Galactose Raffinose Trehalose grape must, Italy; CBS 6306 (NRRL Y-7785), type strain Sucrose of Candida entomaea, from an insect tunnel in pine (Pinus Maltose radiata). South Africa. Assimilation: + A/^-Acetyl-D-glucosamine Complementary mating types: CBS 7066 (h^) and Glucose Methanol Galactose CBS 7067 (h-). + L-Sorbose Ethanol Type strain: CBS 7066. + + Sucrose Glycerol Erythritol + Comments: P. mexicana, which is found in cacti from Maltose + Ribitol Baja California, Mexico, as well as from the southwestern Cellobiose Trehalose s Galactitol U.S.A., has been isolated only as haploid mating types. Lactose D-Mannitol V Miranda et al. (1982) raised the possibility that Can- Melibiose D-Glucitol V dida terebra and C entomaea represent anamorphs of Raffinose a-Methyl-D-glucoside V Salicin + P. mexicana. C.-F. Lee et al. (1993) demonstrated through Melezitose D-Gluconate s comparisons of nDNA complementarity that C. terebra, Inulin Soluble starch DL-Lactate + C entomaea and C. ueronae are conspecific. Kurtzman D-Xylose + Succinate + and Robnett (unpublished) found the nucleotide sequences L-Arabinose Citrate + from the 5'-end of the large subunit rRNA genes for D-Arabinose Inositol Hexadecane all three Candida species, as well as for P. mexicana, D-Ribose + Nitrate to be identical, thus confirming C terebra, the species L-Rhamnose Vitamin-free of taxonomic priority, to represent the anamorph of D-Glucosamine Additional assimilation tests and other growth P mexicana. characteristics: 2-Keto-D-gluconate Starch formation 5 -Keto-D-gluconate Gelatin liquefaction 42.53. Pichia meyerae van der Walt (1982a) Saccharate Growth at 37T + Anamorph: Candida meyerae van der Walt 10% NaCl/5% glucose Synonym: Candida meyerae van der Walt (1982a)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to cylindroidal, (1.53.6)x(1.6-6.2)|im, and occur singly, in pairs and in small clusters. Growth is butyrous, glistening and tannishwhite. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows some well-branched pseudohyphae with blastoconidia. True hyphae were not observed, but van der Walt (1982a) reported their occurrence on corn meal agar. Aerobic growth is tannish-white, glistening, butyrous, and low convex with margins that are smooth to lobed. Odors

Co-Q: 7, CBS 7076 (Billon-Grand 1985). Mor/o G + C: 48.5, 48.9, CBS 7077, 7078 (BD: Kurtzman, unpublished).

Origin of the strains studied: CBS 7076 (NRRL Y-17236), from rotting insect infested spurge {Euphorbia ingens), Groblersdal district, South Africa; CBS 7077 (NRRL Y-12777) and CBS 7078 (NRRL Y-12778), haploids from a heat-treated cukure of CBS 7076. Complementary mating types: CBS 7077 and CBS 7078, derived from CBS 7076. Type strain: CBS 7076. Comments: P. meyerae is phenotypically similar to P. euphorbiae, P. rhodanensis, P. wickerhamii, P. ueronae, P. amylophila and P. mississippiensis, which are heterothallic as well. In pairings among these species, van der Wah and Opperman (1983) detected a mating reaction

324

Vb. Descriptions of teleomorphic ascomycetous genera and species

only between R meyerae and P. euphorbiae, but the resulting zygotes failed to produce ascospores. 42.54. Pichia minuta (Wickerham) Kurtzman (1984a) This species has two varieties: Pichia minuta (Wickerham) Kurtzman van minuta (1984a) Synonyms: Hansenula minuta Wickerham (1951) Zygohansenula minuta (Wickerham) Krasil'nikov (1954a) Ogataea minuta (Wickerham) Y. Yamada, Maeda & Mikata (1994c) ITorulopsis methanolovescens Oki & Kouno (Oki et al. 1972) ICandida methanolovescens (Oki & Kouno) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Pichia lindneri Henninger & Windisch (1975a)

Pichia minuta var. nonfermentans (Wickerham) Kurtzman (1984a) Synonyms: Hansenula nonfermentans Wickerham (1969b) Ogataea minuta (Wickerham) Y. Yamada, Maeda & Mikata var. nonfermentans (Wickerham) Y Yamada, Maeda & Mikata (1994c)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.02.6)x( 1.0-3.2) [im, and occur singly or in pairs. Growth on the surface of assimilation media: Pellicles are not produced and generally there are no rings. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither hyphae nor pseudohyphae are detected under the coverglass. Aerobic growth is light tan, glistening, and butyrous to mucoid. Colony margins are entire. Some strains produce a faintly sweet odor. Formation of ascospores: Ascospore formation is preceded by conjugation between a parent cell and a bud. Asci produce one to four hat-shaped ascospores and become deliquescent at maturity. The spores are quite small but increase in size following their release. Because of the mode of ascus formation and the observation that singlespore isolates from four-spored asci are sporogenous, the species is presumed to be homothallic (Kurtzman, unpublished). The variety nonfermentans is presumed to be homothallic for the same reasons. Ascospores were observed for both varieties on 5% malt extract agar after 15-30 days at 25''C. Fermentation: Glucose Galactose Sucrose Maltose

+/w -

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + V + V -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ +/w

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction w/Saccharate Growth at 37°C 10% NaCl/5% glucose v Co-Q: 7, CBS 1708, CBS 5764 (Yamada et al. 1973a). Mol% G + C: 47.5, CBS 1708 {T^: Nakase and Komagata 1971b); 46.7, 47.7, CBS 1708, 6502 (BD: Kurtzman 1984a), var. minuta; 45.6, CBS 5764 {T^: Nakase and Komagata 1971b); 45.1, 45.3, CBS 5764 (BD: Kurtzman 1984a, Phaff et al. 1983), var. nonfermentans.

Supplementary description of P. minuta var. nonfermentans: The variety nonfermentans is capable of growth at 37°C and can be separated from the variety minuta on this characteristic. Additionally, the variety nonfermentans does not ferment glucose. Origin of the strains belonging to the variety minuta: Isolated from fermenting mushrooms (Mycena pura Fries) by A.T. Henrici (1); the type strain of i? lindneri, NRRL Y-10948 (CBS 6502), forest soil, Germany. Type strain: CBS 1708 (NRRL Y-411), from fermenting mushrooms. Origin of the strain belonging to the variety nonfermentans: The only known strain of this variety was isolated from Libby Creek near Laramie, Wyoming, U.S.A. Type strain: CBS 5764 (NRRL YB-2203). Comments: The species described as Hansenula minuta, H. nonfermentans and P. lindneri have uniquely small cells and give similar reactions on fermentation and assimilation tests. Because of this phenotypic likeness, Kurtzman (1984a) compared the nDNA complementarity of the taxa and found 75% relatedness between H. minuta and P. lindneri and 48% relatedness between H. minuta and H. nonfermentans. These data indicate H. minuta and P. lindneri to be somewhat divergent strains of the same species. H. nonfermentans was regarded as a variety of H. minuta, but these two species may be sibling

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

species instead. As discussed under Comments on the genus, these data show that nitrate assimilation is not a reHable character for the separation of species or genera and prompted the transfer of Hansenula species with hat-shaped ascospores to Pichia which has taxonomic priority. 42.55. Pichia mississippiensis Kurtzman, Smiley, Johnson, Wickerham & Fuson (1980a) Synonym: Candida obtusa (Dietrichson) van Uden & do Carmo-Sousa ex van Uden & H.R. Buckley var. arabinosa Montrocher (1967)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells, which are quite variable in size, are ellipsoidal to elongate, or infrequently spheroidal, (1.15.0)x(2.0-12.0)^m, and occur singly, in pairs or in clusters. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed but rings occasionally develop. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and highly branched pseudohyphae as well as infrequent true hyphae. True hyphae show no evidence of a dolipore septum when viewed under the light microscope. Aerobic growth is light tan, glistening, and butyrous; the center is raised and the margin entire. A faint ester-like odor is produced.

Fermentation: Glucose Galactose Sucrose Maltose

+'

Lactose Raffinose Trehalose

+

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

325

-

+ + + +

-

+

-

+ + w/-

-

V

-

-

-

-

+ +

-

+ + + V

+ + + V

-

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37''C + 10% NaCl/5% glucose Co-Q: 7, CBS 7023 (Billon-Grand 1985). Mol% G + C: 47.2^8.0, CBS 7023 and three additional strains (BD: Kurtzman et al. 1980a).

Origin of the strains studied: Frass from shortleaf (Pinus echinata) and loblolly (Pinus taeda) pines, Mississippi, U.S.A. (9); laboratory contaminant (1); from a mushroom, France (1). Complementary mating types: NRRL YB-1294-6 (CBS 7024) and NRRL YB-1294-7 (CBS 7025). Type strain: CBS 7023 (NRRL YB-1294), from frass of a loblolly pine. Comments: The relationship of this species with P. amylophila is discussed in the description of the latter species. Fig. \A5. P. mississippiensis, CBS 7023. Ascosporogenous culture after 3 days, 25°C, on 5% malt extract agar. Bar = 5 ^xm.

Formation of ascospores: Asci arise from diploid cells or from the pairing of complementary mating types and form two to four hat-shaped spores (Fig. 145). Asci are spheroidal to ellipsoidal and are free or attached to pseudohyphae. Infrequently, a pseudohyphal or hyphal cell may become an ascus. At maturity asci become deliquescent. Ascospores were observed on 5% malt extract and YM agars after 5-8 days at 25°C.

42.56. Pichia naganishii K. Kodama (Kodama & Kyono 1974a) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (1.84.2) X (2.5-6.5) |im, and occur singly, in pairs or in small clusters. Growth is cream-colored, smooth, glistening and butyrous. Growtli on the surface of assimilation media: Thin rings are formed, but no pellicles. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is faint tan

Vb. Descriptions of teleomorphic ascomycetous genera and species

326

in color, smooth, glistening and butyrous with an entire to finely lobed margin. A faint acidic odor is produced. Formation of ascospores: Ascus formation may be preceded by conjugation between independent cells or between parent and bud. Two to four hat-shaped ascospores are produced in each ascus, and they are readily liberated after formation. Single-spore isolates from four-spored asci are sporogenous, indicating the species to be homothallic. Ascospores were observed on 5% malt extract and YM agars after 3-5 days at IS^'C. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + w + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction w Saccharate Growth at 2>TC + 10% NaCl/5% glucose + Co-Q: 7, CBS 6429 (Billon-Grand 1985). MoI% G + C: 46.1, CBS 6429 {T^: Kodama and Kyono 1974a).

Origin of the strain studied: Exudate from the plant Camellia japonica L., Japan (1). Type strain: CBS 6429 (NRRL Y-7654).

25°C, the cells are spheroidal to elongate, (1.6-4.6) x (2.18.6) (im, and single, in pairs, or small clusters. Growth is butyrous, dull-glistening and tannish-white. Growth on the surface of assimilation media: Dry climbing pellicles are present. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant well-branched pseudohyphae with relatively few blastoconidia. True hyphae are not produced. Aerobic growth is white to tannish-white, dull-glistening, butyrous, and convex in profile with margins entire to lobed. A faintly acidic odor is produced. Formation of ascospores: This species is heterothallic. Ascospores may be formed directly by diploid strains or following conjugation between complementary mating types. Asci produce one to four hat-shaped ascospores that are freed at maturity. Ascospores were observed on 5% malt extract agar after 10 days at 25°C. Fermentation:

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + w/+/w -

Additional assimilation tests and other grow^th characteristics:

Comments: The original description of P. naganishii (Kodama and Kyono 1974a) is generally in agreement with the results obtained in the present study. However, growth on L-sorbose, galactitol and citric acid proved to be negative rather than positive as originally reported.

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 32.9, 33.2, ( 7 ^ : Nakase 1971a).

42.57. Pichia nakasei J.A. Barnett, Payne & Yarrow (1983)

Origin of the strains studied: CBS 5141 (NRRL Y-7686), from apple must, Chile; CBS 6374 (NRRL Y-17248), the type strain of Candida citrea, from a lemon {Citrus sp.) fruit, Japan; CBS 6737 (NRRL Y-17237), from the fruit of a banana (Musa sapientum), Japan; CBS 6738 (NRRL Y-17238), from a lemon fruit, Japan.

Anamorph: Candida citrea Nakase Synonym: Candida citrea Nakase (1971c)

Growth on 5% malt extract agar: After 3 days at

+/w

Starch formation Gelatin liquefaction Growth at 3TC

w/-

CBS 6374 (AJ 4769), CBS 6737 (AJ 4441)

111

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Complementary mating types: CBS 6374 {a) and CBS 6737 (a). Type strain: CBS 5141. Comments: The type strain of P. nakasei maintained at CBS was initially an ascosporogenous diploid but reverted to a haploid mating type following long-term serial cultivation (Barnett et al. 1990), a phenomenon that has been observed for certain other heterothallic species (Wickerham et al. 1970a,b, Kurtzman and Smiley 1976). In contrast, the type strain maintained in the ARS Culture Collection (NRRL), which was obtained from CBS in 1974 and immediately lyophilized, is still ascosporogenous. 42.58. Pichia nakazawae K. Kodama (1975) This species has two varieties: Pichia nakazawae K. Kodama var. nakazawae (1975) Synonym: Yamadazyma nakazawae (K. Kodama) Billon-Grand (1989)

Pichia nakazawae var. akitaensis K. Kodama (1975) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.04.5)x(3.0-9.8)|im, and occur singly, in pairs and in clumps. Growth is cream-colored, smooth, glistening and butyrous. Grow^th on the surface of assimilation media: Thin to moderately thick climbing pellicles are produced. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows occasional branching outgrowths of ovoidal cells, but no pseudohyphae or true hyphae. Aerobic growth is tannishwhite, smooth or finely striated, glistening, and butyrous with entire to finely lobed margins. A faintly acidic odor is produced. Formation of ascospores: Ascus formation may be preceded by either conjugation between a parent cell and a bud or by conjugation between independent cells. Asci contain two to four hat-shaped ascospores and these are released soon after formation (Fig. 146). Both varieties of P. nakazawae were found to be homothallic through examination of single-spore isolates from four-spored asci (Kurtzman 1984b). Ascospores for both varieties were observed on 5% malt extract and YM agars after 3-5 days at 25'^C. Fermentation: Glucose Galactose Sucrose Maltose

+ +

-

w

Lactose Raffinose Trehalose

t!it

m

m

f5

Fig. 146. P. nakazawae var. nakazawae, CBS 6700. Ascosporogenous culture after 2 weeks, 25°C, on 5% malt extract agar. Bar = 5 ^xni.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + +

-

+

-

+ + + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi-ee

+

-

+ + + +

-

+ + + +/w + +/w + +

s

Additional assimilation tests and other g;rowf characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 3 7 ^ -

10% NaCl/5% glucose + Co-Q: 9, CBS 6700 (Billon-Grand 1985). Mol% G + C: 38.7 (7;^: Kodama 1975), 39.4 (BD: Kurtzman 1984b), CBS 6700, var. nakazawae; 39.5 (7;^: Kodama 1975), 39.9 (BD: Kurtzman 1984b), CBS 6701, var. akitaensis.

Supplementary description of Pichia nakazawae var. akitaensis: The variety akitaensis differs from the variety nakazawae by its failure to ferment galactose, by the presence of weak and slow fermentations of sucrose and trehalose, and from inability to assimilate L-rhamnose and lactic acid. The fermentation rate of variety akitaensis is quite weak in comparison to the vigorous ability of variety nakazawae. Another difference between the two varieties is the formation of moderately well-developed pseudohyphae by variety akitaensis, which causes agargrown colonies to appear dull and finely convoluted. Origin of the strain belonging to the variety nakazawae: Exudate of an oak {Quercus myrsinaeforia Blume), Japan (1).

328

Vb. Descriptions of teleomorphic ascomycetous genera and species

Type strain: CBS 6700 (NRRL Y-7903). Origin of the strain belonging to the variety akitaensis: Exudate of a willow (Salix sp.), Japan (1). Type strain: CBS 6701 (NRRL Y-7904). Comments: The original description of this species agrees with the results of the present study except that the variety nakazawae was found to slowly assimilate D-ribose and to give a weak and latent reaction on lactic acid. In addition, both varieties assimilated L-sorbose, but neither grew in vitamin-free medium. nDNA relatedness between the two varieties is 41%, suggesting that they are either divergent varieties of a single species or that they are sibling species. Varietal designations were maintained pending evidence that the pair is reproductively isolated (Kurtzman 1984b). 42.59. Pichia norvegensis Leask & Yarrow (1976) Anamorph: Candida norvegensis Dietrichson ex van Uden & H.R. Buckley Synonyms: Candida zeylanoides (Castellani) Langeron & Guerra var. norvegensis Dietrichson (1954) nom. nud. Candida norvegensis (Dietrichson) van Uden & Farinha (1958) nom. nud. Candida norvegensis Dietrichson ex van Uden & H.R. Buckley (1970) (incorrectly described as Candida norvegensis (Dietrichson) van Uden & Farinha ex van Uden & H.R. Buckley) Candida trigonopsoides Dietrichson (1954) nom. nud. Candida mycoderma (Reess) Lodder & Kreger-van Rij var. annulata Dietrichson (1954) nom. nud.

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to ellipsoidal, (1.7^.1)x(3.010.0) jim, and occur singly, in pairs or in clusters. Growth is yellowish-white, smooth, glistening and butyrous. Growth on the surface of assimilation media: Thin pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant pseudohyphae. Some of the longer pseudohyphal cells are markedly curved. True hyphae are not produced. Aerobic growth is light tan in color, smooth, glistening, butyrous and with an entire margin. A faint acidic odor is produced. Formation of ascospores: Asci are unconjugated and form one to four hat-shaped ascospores which are released at maturity. Leask and Yarrow (1976) reported that heattreatment of sporogenous cultures gave only sporogenous colonies, indicating the species to be homothallic. Spores were observed on Powell's acetate agar after 1015 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + w + w -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at SVC + 10% NaCl/5% glucose + Co-Q: 7, CBS 6564 (Billon-Grand 1985). Mol% G + C: 35.6, 36.6, IFO 1020, CBS 1922 {T^\ Nakase and Komagata 1971f), 35.5, 37.5, CBS 6564 (Billon-Grand 1981; BD: Kurtzman, unpublished).

Origin of the strain studied: Vagina of a pregnant woman (1). Type strain: CBS 6564 (NRRL Y-7687). Comments: Gueho and Phaff (1983) demonstrated by nDNA reassociation that Candida norvegensis is the anamorph of P. norvegensis. These authors noted that in addition to its clinical association, P norvegensis is commonly isolated from rots of opuntia cactus. 42.60. Pichia ofunaensis (Makiguchi & Y. Asai) Kurtzman (1996)

Synonym: Hansenula ofunaensis Makiguchi & Y. Asai (Asai et al. 1976)

Growth on 5% malt extract agar: After 3 days at 25*'C, the cells are spheroidal to elongate, (1.5-2.6)x(2.14.8) |im, and occasionally tapered or of irregular shapes. The cells occur singly, in pairs and in small clusters. Growth is butyrous, glistening and tannish-white. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows branched pseudohyphae with blastoconidia. True hyphae appear to be absent. Aerobic growth is butyrous, tannishwhite, glistening and convex with a depressed center. Colony margins are entire to broadly lobed. A faint acidic odor is present. Formation of ascospores: Ascospores were not observed in the present study. Asai et al. (1976) and Barnett et al. (1990) illustrated unconjugated asci containing one

329

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

to four hat-shaped ascospores. Asci become deUquescent. It is not known whether the species is homothallic or heterothaUic. Ascosporulation was reported to occur on YM agar after 7 days at room temperature.

25''C, the cells are ovoidal to cylindroidal, (1.7-6.5) x (2.525) [im, and occur singly, in pairs and in short chains. Growth is somewhat pseudomycelial and cream-colored.

Fermentation:

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, moderately branched pseudohyphae. True mycelium was not observed. Aerobic growth is grayish-white, dull and nearly smooth to finely convoluted. Margins are irregularly lobed.

Glucose Galactose Sucrose Maltose

ws ws -

Lactose Raffinose Trehalose

+ + + v v s + + + v v + + s + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + v + + + + v s s s + s s + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 32.6, CBS

ws s

Starch formation Gelatin liquefaction Growth at 2>TC

+

8129 (HPLC: Miller and Baharaeen 1979).

Origin of the strain studied: Soil, Ofuna, Japan. Type strain: CBS 8129 (CBS 6861, NRRL Y-10998). Comments: This species was described as nonfermentative, but a small amount of gas (2-5%) was found in Durham tube inserts after 12-16 days for glucose, galactose and trehalose. Assimilation reactions listed as variable did not repeatedly show growth on the designated compounds. 42.61. Pichia ohmeri (Etchells & T.A. Bell) Kregervan Rij (1964b) Synonyms: Endomycopsis ohmeri Etchells & T.A. Bell (1950a) Yamadazyma ohmeri (Etchells & T.A. Bell) Billon-Grand (1989) Kodamaea ohmeri (Etchells & T.A. Bell) Y. Yamada, Suzuki, Matsuda & Mikata (1995) Endomycopsis ohmeri Etchells & T.A. Bell var. minor Etchells & T.A. Bell (1950a) Candida guilliermondii (Castellani) Langeron & Guerra var. membranaefaciens Lodder & Kreger-van Rij (1952) Trichosporon arenicola de Lima & Aciole de Queiroz (1972)

Growth on 5% malt extract agar: After 3 days at

Growth on the surface of assimilation media: Pellicles are formed.

Formation of ascospores: Infrequently, diploid strains are isolated which form unconjugated asci, but this heterothaUic species is normally isolated in the haploid form and requires conjugation of complementary mating types before sporulation. Asci form one to four spores and are deliquescent at maturity. Spore shape is determined by the mating types and may be either hat-shaped or spheroidal (Wickerham and Burton 1954b). Pairing of NRRL Y-2078 (CBS 2037) and NRRL Y-2079 (CBS 568) gives hat-shaped spores while the conjugation of NRRL Y-2078 and NRRL Y-2080 (CBS 2038) produces spheroidal spores. Ascospores were observed on 5% malt extract agar after 3-5 days at 25''C, following pairing of complementary mating types. Fermentation: Glucose Galactose Sucrose Maltose

+ +/w + w/-

Lactose Raffinose Trehalose

+ + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ w/-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

-

+

V

V

-

+

+

-

+

+

V

-

+ + + + V V

+ +

-

+

-

Additional assimilation tests and other g[rowf characteristics:

2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate

+

-

Starch formation Gelatin liquefaction Growth at 3 7 T

_ w/+

10% NaCl/5% glucose + Co-Q: 9, CBS 5367 and 2 additional strains (Yamada et al. 1973a). Mol% G + C: 42.2, 42.4, CBS 5367, AJ 5088 (7;^: Nakase and

330

Vb. Descriptions of teleomorphic ascomycetous genera and species

Komagata 1970b); 44.3-44.7, CBS 5367 and 3 additional strains (BD: Fuson et al. 1980).

Origin of the strains studied: Cucumber brine (3); pleural fluid (1); gooseberry jelly (1); sambal ulak (1); flowers (2); unknown substrates (3). Complementary mating types: NRRL Y-2078 (CBS 2037) and NRRL Y-2079 (CBS 568). Type strain: CBS 5367 (NRRL Y-1932), from cucumber brine.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + + -

Comments: Pichia ohmeri is an unusual species because, depending upon the mating types paired, ascospores may be either hat-shaped or spheroidal (Wickerham and Burton 1954b). Preliminary genetic studies suggest that only a few genes determine which spore shape results (Kurtzman, unpublished). These studies also demonstrated Additional assimilation tests and other growth ascospore fertility through the F2 generation, thus indicat- characteristics: Starch formation ing the various mating types to be members of the same 2-Keto-D-gluconate Gelatin liquefaction species. This premise was confirmed by the work of Fuson 5-Keto-D-gluconate Growth at 37°C + et al. (1980), which showed the R ohmeri mating types to Saccharate 10% NaCl/5% glucose v exhibit 98-100% DNA relatedness. Co-Q: 7 (Y. Yamada and H.J. PhaflF, personal communication). 42.62. Pichia onychis Yarrow (1965) Synonym: 1Pichia xylopsoci van der Walt & D.B. Scott (1971c)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (2.0^.5) x(2.8-7.8) [xm, and occur singly or in pairs. Growth is cream-colored, glistening and butyrous. Growth on the surface of assimilation media: Thin pellicles may be formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows a simple, sparingly branched pseudomycelium, but true hyphae are not formed. Aerobic growth is tannish-white, glistening, butyrous, and with an entire or occasionally lobed margin. Formation of ascospores: Asci are unconjugated and produce one to four hat-shaped ascospores. The spores are liberated soon after formation. It has not been determined whether this species is homothallic or heterothallic. Ascospores were observed on 5% malt extract, YM, and V8 agars after 10 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raflfinose Trehalose

Mol% G + C: 40.8, 42.7, CBS 5587 {T^: J.B. Fiol, cited by BillonGrand 1981; BD: Kurtzman, unpublished).

Origin of the strains studied: Infected human nail (1); corn meal (1); dust (1). Type strain: CBS 5587 (NRRL Y-7123), from an infected nail. Comments: Results from the present study are in agreement with previous work (Yarrow 1965, Kreger-van Rij 1970c) except that growth on inulin was found to be positive for some strains. Yarrow (personal communication) identified the type strain of 7? xylopsoci as P. onychis. Unfortunately, the culture was lost. 42.63. Pichia opuntiae Starmer, Phaff, Miranda, M.W. Miller & Barker (1979) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to ellipsoidal, (1.5^.5) x (2.57.5) ^m, and occur singly, in pairs or in short chains. Growth is butyrous and tannish-white. Growth on the surface of assimilation media: Thin rings and incomplete pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows infrequent rudimentary pseudohyphae but no true hyphae. Aerobic growth is light tannish-white, smooth, glistening, butyrous, and low convex with entire to finely lobed margins. A faintly acidic odor is present. Formation of ascospores: This species is heterothallic and haploid mating types are usually isolated from nature, but occasionally diploids are found. The ascospores, which are hat-shaped, usually form in diploid cells that bud from zygotes following mixture of complementary

331

42. Pichia E.C. Hansen emend. Kurtzman / C.R Kurtzman

mating types. There are commonly two ascospores per deliquescent ascus, but occasionally four are produced. Ascospores were observed on YM agar at 25''C within 5-7 days following mixture of complementary mating types. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + s + + + +/w -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 3 7 T 10% NaCl/5% glucose Co-Q: 7, CBS 7010 (Billon-Grand 1985). Mol% G + C: 32.9-33.4, CBS 7010 and 5 additional strains (BD: Holzschu et al. 1985).

Origin of the strains studied: CBS 7010 (UCD-FST 77-40, NRRL Y-11707) and CBS 7011 (UCD-FST 7742, NRRL Y-11708), both from rotted prickly pear cactus (Opuntia inermis), Yarrawonga, Australia. Complementary mating types: CBS 7010 (h^) and CBS 7011 ( r ) . Type strain: CBS 7010. Comments: Results from the current study are in good agreement with the original description. The relationship of P. opuntiae with other cactophilic yeasts is discussed in the treatments of P. antillensis and P. thermotolerans. Separation of P. opuntiae from P antillensis is unreliable when using results from standard assimilation tests, but it differs from P antillensis by being killer negative. At present, P opuntiae is known only from Opuntia cacti in Australia whereas P antillensis appears restricted to columnar cacti of the West Indies. 42.64. Pichia pastoris (Guilliermond) Phaff (1956) Synonyms: Zygosaccharomyces pastori Guilliermond (1919) Saccharomyces pastori (Guilliermond) Lodder & Kreger-van Rij (1952) Petasospora pastori (Guilliermond) Boidin & Abadie (1954) Zygowillia pastori (Guilliermond) Kudryavtsev (1960) Zymopichia pastori (Guilliermond) Novak & Zsolt (1961)

Komagataella pastoris (Guilliermond) Y. Yamada, Matsuda, Maeda & Mikata (1995)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2.0^.0) x (2.25.8) |im, and occur singly or in pairs. Growth is creamcolored, dull to faintly glistening and butyrous. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is white, dull to faintly glistening and butyrous. Margins may be finely serrate or lobed. Formation of ascospores: Asci may be unconjugated or show conjugation between parent cell and bud or between independent cells. One to four hat-shaped ascospores are formed in each ascus and they are soon liberated (Fig. 147). Single-spore isolates from four-spored asci are ascosporogenous, indicating this species to be homothallic. Ascospores were observed on 5% malt extract, V8 and acetate agars after 10-20 days at 25''C. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + v -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

v

Starch formation Gelatin liquefaction Growth at 37°C

+/w

Co-Q: 8, CBS 704, IFO 948, IFO 1013 (Yamada et al. (1973a). Mol% G + C: 40.2, 41.0, IFO 1013, CBS 704 {T^: Nakase and Komagata 1970b); 42.8, CBS 704 (BD: Kurtzman, unpublished).

332

Vb. Descriptions of teleomorphic ascomycetous genera and species

^L/

through deliquescence of the ascus. Both heat-treated sporogenous cultures and single-spore isolates give rise to sporogenous colonies and the species is presumed to be homothallic. Wickerham (1964b) reported the presence of glistening colony forms, such as NRRL YB-3807, that were asporogenous. Ascospores were observed on 5% malt extract and YM agars after 5-10 days at 25°C.

C!>

Fermentation:

) t.«

Glucose Galactose Sucrose Maltose

ril

~%

Fig. 147. P. pastoris, CBS 704. Ascosporogenous culture after 8 days 25°C, onVSagar. Bar = 5!im.

Assimilation:

Origin of the strains studied: Exudate of a chestnut tree (Castanea sp.), France (1); slime flux on oak {Quercus kelloggii), U.S.A. (1). Type strain: CBS 704 (NRRL Y-1603), from a chestnut tree. Comments: P. pastoris has become of considerable interest to biotechnologists because its gene expression system has been developed to produce large amounts of medically and industrially important proteins (Cregg et al. 1993). Two aspects of the species have contributed to its utility. First, fermentation techniques were developed for maintaining extremely high cell densities in excess of lOOg/1 dry weight. Secondly, because E pastoris assimilates methanol, the expression system is linked with alcohol oxidase which is abundantly produced in the presence of methanol. 42.65. Pichia petersonii (Wickerham) Kurtzman (1984a) Synonym: Hansenula petersonii Wickerham (1964b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ellipsoidal to elongate, (1.2-4.1) x(2.87.1) ^m, and occur singly or in pairs. Growth is butyrous and light tan in color. Growtli on tlie surface of assimilation media: Smooth, mat pellicles and rings develop on certain media. Dalmau plate culture on morphology agar: After 7 days at 25°C, abundant, highly branched pseudohyphae are formed under the coverglass. True hyphae are also produced by the mat oxidative forms of this species, but not by the smooth glistening types, such as NRRL YB-3807. Aerobic growth is light tan, smooth, dull to glistening, and butyrous. Margins of single colonies may be entire or lobed and surrounded by hyphal outgrowth. Formation of ascospores: Vegetative cells directly convert to asci without prior conjugation. Asci form one to four hat-shaped ascospores which are freed

Lactose Raffinose Trehalose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

TV^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ +

+ + + + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

-

Starch formation Gelatin liquefaction Growth at 37''C

+

Co-Q: 7, CBS 5555, CBS 5556 (Yamada et al. 1973a). Mol% G + C: 43.9, 44.1, CBS 5556, CBS 5555 (7^ : Nakase and Komagata 1971b); 44.9, CBS 5555 (BD: Kurtzman et al 1979).

Origin of the strains studied: Human cadavers preserved with embalming fluid (2). Type strain: CBS 5555 (NRRL YB-3808). Comments: Wickerham (1964b, 1970a) discussed the similarities of P petersonii, P jadinii and C utilis and suggested that their primary habitat may be warmblooded animals. All three species are resistant to toxic chemicals, especially embalming fluid, and van der Walt and Johannsen (1975b) observed a similar chemotolerance for P lynferdii. As noted earlier, Kurtzman et al. (1979) demonstrated through nDNA reassociation studies that P jadinii and C utilis are conspecific whereas P petersonii is a separate species.

42. Pichia E.G. Hansen emend. Kurtzman / C.P. Kurtzman

42.66. Pichia philodendri (van der Walt & D.B. Scott) Kurtzman (1984a) Synonyms: Hansenula philodendri (as H. philodendrd) van der Walt & D.B. Scott (Scott & van der Walt 1970b) Ogataea philodendri (van der Walt & D.B. Scott) Y. Yamada, Maeda & Mikata (1994c)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.84.8) X (1.8-6.9) ^m, and single, in pairs, or less frequently, in small clusters. Growth is butyrous and tannish-white. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither true hyphae nor pseudohyphae are detected under the coverglass. Aerobic growth is white, smooth to finely striated, glistening, and butyrous. Colony margins are usually lobed. A faintly acidic odor is present. Formation of ascospores: Vegetative cells may convert directly to asci, or more frequently, ascus formation is preceded by conjugation between independent cells. Asci form one to four hat-shaped ascospores, and the spores are released through ascus deliquescence. Singlespore isolates from four-spored asci gave ascosporogenous colonies and the species is presumed to be homothallic (Kurtzman, unpublished). Ascospores were observed on 5% malt extract, YM, and V8 agars after 3 days at 25°C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s + + v s -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC + 10% NaCl/5% glucose + Co-Q: 7, CBS 6075 (Lee and Komagata 1980a). Mol% G + C: 44.0,49.7, CBS 6075 (HPLC: Miller and Baharaeen 1979; T^: Lee and Komagata 1980a).

Origin of the strains studied: Frass from tunnels

333

of the Bostrichid beetle (Xylion adustus Fahr.), which was infesting a moribund fig (Ficus sycomorus L.), near St. Lucia, Natal, South Africa (2). Type strain: CBS 6075 (NRRL Y-7210). 42.67. Pichia philogaea van der Walt & E. Johannsen (1975c) Synonym: Yamadazyma philogaea (van der Walt & E. Johannsen) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal, ellipsoidal or cylindroidal, (2.8-7.5)X(3.0-10.0) |im, and occur singly, in pairs or in short chains. Growth is butyrous and cream-colored. Growth on the surface of assimilation media: Thin pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows pseudohyphae to be common but relatively unbranched. True hyphae are not formed. Aerobic growth is tannishwhite, glistening and smooth orfinelystriated. The margin is entire or occasionally lobed. A faintly acid odor is produced. Formation of ascospores: Ascus formation is preceded by conjugation between a parent cell and a bud. Asci produce one to four hat-shaped ascospores which are released at maturity. Van der Walt and Johannsen (1975c) reported that heat-treated ascosporogenous cultures yielded only sporogenous isolates, and the species appears homothallic. Ascospores were observed on 5% malt extract and YM agars after 3 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose w/-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Vb. Descriptions of teleomorphic ascomycetous genera and species

334

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37''C 10% NaCl/5% glucose + Co-Q: 9, CBS 6696 (Billon-Grand 1985). Mol% G + C: 42.0, CBS 6696 {T^: Billon-Grand 1981).

w/w

Origin of the strain studied: Grassland soil, South Africa (2). Type strain: CBS 6696 (NRRL Y-7813).

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Comments: The results reported in the original description are generally in agreement with the findings of the present study. Van der Walt and Johannsen (1975c) noted sucrose fermentation to be slow but strong. It was negative in the present tests as was growth on salicin, originally reported as positive. P. philogaea shows considerable Additional assimilation tests and other growth resemblance to R nakazawae var. nakazawae, but differs characteristics: Starch formation by its inability to assimilate soluble starch, L-rhamnose 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate and salicin. Growth at 37T Saccharate 42.68. Pichia pijperi van der Walt & Tscheuschner (1957a) Synonym: Hanseniaspora pijperi (van der Walt & Tscheuschner) Ditlevsen & Hjort (1964)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to cylindroidal, (3.0-5.8)x(5.020.0) jim, and occur singly, in pairs or in short chains. Growth is butyrous and cream-colored. Growth on the surface of assimilation media: Dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows poorly to moderately well-developed pseudohyphae but no true hyphae. Aerobic growth is light tan, dull, generally smooth, and with an entire orfinelylobed margin. A faint ester-like odor is produced. Formation of ascospores: Asci are unconjugated and produce one to four hat-shaped ascospores. The spores are readily released at maturity. It is not known whether the species is homothallic or heterothallic. Ascospores were observed on YM and 5% malt extract agars after 8-10 days at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

+

-

Lactose Raffinose Trehalose

10% NaCl/5% glucose Co-Q: 7, CBS 2887 (Yamada et al. 1973a). Mol% G + C: 40.7, 42.5, CBS 2887 {T^\ Nakase and Komagata 1970b; BD: Fuson et al. 1980).

Origin of the strains studied: Buttermilk (1); Drosophila melanogaster (1). Type strain: CBS 2887 (NRRL YB-4309), from buttermilk. Comments: Despite the appearance of bipolar budding by P pijperi, Kreger-van Rij (1970c) reported that bud scars observed under the transmission electron microscope were not the typical multiple scars of Hanseniaspora, but were like those seen in other species of Pichia. 42.69. Pichia pint (Hoist) Phaff (1956) Synonyms: Zygosaccharomyces pini Hoist (1936) Petasospora pini (Hoist) Boidin & Abadie (1954) Saccharomyces pini (Hoist) Shifrine & Phaff (1956) Zygowillia pini (Hoist) Kudryavtsev (1960) Ogataea pini (Hoist) Y. Yamada, Matsuda, Maeda & Mikata (1995)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ovoidal, (1.6^.2) x (2.26.0) |im, and occur singly, in pairs and occasionally in small clusters. Growth is tannish-white, smooth, dull to glistening, and butyrous to somewhat mucoid. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows either no pseudomycelium or only a few poorly developed

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

pseudohyphae. True hyphae are not formed. Aerobic growth is tannish-white, smooth to finely striated, dull to glistening, and butyrous. Margins range from entire to lobed. A faint acidic odor is often produced. Formation of ascospores: Asci may be unconjugated or show conjugation between a parent cell and a bud or between independent cells. Asci contain two to four hat-shaped ascospores which are liberated soon after formation. The presence of conjugation between cells and their buds suggests the species to be homothallic. Ascospores were observed on 5% malt extract, V8 and corn meal agars after 2-10 days at IS^'C.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

V

+

V

-

+ +

V V V V V

-

-

Lactose Raffinose Trehalose

335

Comments: As noted earlier, P pini and P glucozyma show great phenotypic similarity, and Kreger-van Rij (1964b) reported some strains of P pini to assimilate nitrite. However, Kurtzman (unpublished) found the type strains of the two species to have only 3% nDNA relatedness. 42.70. Pichia populi (Phaff, Y. Yamada, Tredick & Miranda) Kurtzman (1984a) Synonym: Hansenula populi Phaff, Y. Yamada, Tredick & Miranda (1983)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal, ellipsoidal or occasionally elongate, (1.5-4.1)x(2.1-5.6)jim, and occur singly, in pairs and in small clusters. Growth is butyrous, semiglistening and tannish-white.

V

Growth on the surface of assimilation Pellicles are not formed.

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

+/w V V

+ +

-

+ +

media:

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows a few outgrowths of pseudohyphae comprised of undifferentiated cells. True hyphae are not formed. Aerobic growth is butyrous, tannish-white, glistening, and low convex with a raised center. Colony margins range from entire to lobed. A faintly acidic odor is present.

-

c

+ w/-

V V

V

growth

2-Keto-D-gluconate V Starch formation Gelatin liquefaction 5-Keto-D-gluconate Saccharate Growth at 37*'C V 10% NaCl/5% glucose Co-Q: 7, CBS 744 (Yamada et al. 1973a). Mol%G + C: 44.4,43.0, CBS 744 {T^: Nakase and Komagata BD: Fuson et al. 1980).

w/v

1970b;

Origin of the strains studied: From the bark beetle Dendroctonus breuicomis (1), D. pseudosugae (2), D. frontalis (1), larvae of Z). monticolae (1); Curculionidae larvae (1); Hylugonotus brunneus (1); Araucaria araucana (1); frass in shortleaf pine {Pinus echinatd) (1); frass in loblolly pine {Pinus taeda) (1); frass from Pinus sp. (2); frass from pine {Pinus contorta) (4); frass from ponderosa pine {Pinus ponderosa) (1); frass from fir {Abies firma) (1); bark of a dead birch {Betula sp.) (1). Type strain: CBS 744 (NRRL Y-11528), from Dendroctonus breuicomis.

..V-

,M,

%'

\

Fig. 148. P. populi, CBS 8094. Ascosporogenous culture after 2 weeks, 2 5 ^ , on 5% malt extract agar. Bar = 5 [im.

Formation of ascospores: This species is homothallic. Asci may arise from unconjugated cells or form after conjugation between independent cells or after conjugation between a cell and its bud. Asci produce one to four hat-shaped ascospores which are released by ascus deliquescence (Fig. 148). Ascospores were observed on 5% malt extract agar after 7 days at 25°C. Fermentation: absent.

336

Vb. Descriptions of teleomorphic ascomycetous genera and species

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37°C 10% NaCl/5% glucose Co-Q: 7 (Y. Yamada and H.J. Phafif, personal communication). Mol% G + C: 4 3 . 8 ^ 4 . 2 , CBS 8094 and 4 additional strains (BD: Phaff et al. 1983).

Formation of ascospores: This species is heterothallic. Newly isolated strains may be ascosporogenous diploids or haploid mating types. Asci form four hat-shaped ascospores that are liberated soon after formation. Ascospore formation was observed on YM agar after 5-7 days at 25T. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + v -

Additional assimilation tests and other growth Origin of the strain studied: CBS 8094 (UCD-FST 68characteristics: 628C, NRRL Y-12728) was isolated from the slime flux 2-Keto-D-gluconate Starch formation of a Cottonwood tree (Populus trichocarpa) northwest of 5-Keto-D-gluconate Gelatin liquefaction w/Dawson Creek, British Columbia, Canada. Saccharate Growth at ?,TC + 10% NaCl/5% glucose Type strain: CBS 8094. Comments: Phaff et al. (1983) noted P. populi to be phenotypically similar to P. minuta var. nonfermentans and P dryadoides, but demonstrated no significant nDNA binding with either of these two taxa. Of the five strains of P populi examined, all exhibited high nDNA relatedness except UCD-FST 68-603, which showed 77% complementarity with the type strain. 42.71. Pichia pseudocactophila Holzschu, Phaff, Tredick & Hedgecock (1983) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal, ellipsoidal to elongate, (1.65.0)x(1.9-6.6) |im, and single, in pairs and small clusters. Growth is tannish-white, dull-glistening and butyrous. Growth on the surface of assimilation media: Dull, climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25^C, growth under the coverglass shows a few outgrowths of poorly differentiated pseudohyphae. True hyphae are not formed. Aerobic growth is white to tannish-white, glistening and butyrous with a lobed margin. In profile, colonies are low convex with a depressed center. A faint acidic odor is produced.

Co-Q: Not determined. Mol% G + C: 36.4-36.8, CBS 6929 and 5 additional strains (BD: Holzschu et al. 1983).

Origin of the strain studied: CBS 6929 (UCD-FST 77-427, NRRL Y-10966) was isolated from hecho cactus (Pachycereus pecten-aboriginum), Navojoa, Sonora, Mexico. Complementary mating types: CBS 8095 (UCDFST 77-427a, NRRL Y-17240) and CBS 8096 (UCD-FST 77-427b, NRRL Y-17723), derived from the type strain. Type strain: CBS 6929. Comments: Results from the present study are in good agreement with the original description. Holzschu et al. (1983) reported that most strains of P pseudocactophila do not ferment glucose but a few of the isolates that they tested gave a late and weak fermentation of this sugar. Strains of P pseudocactophila were initially included among those described as P cactophila. Isolates of P pseudocactophila proved heterothallic and are noted for asci with four ascospores in contrast to the two-spored asci seen for P cactophila. The two species show diminished nDNA relatedness (35%) and quite different allozyme profiles (Holzschu et al. 1983). Although P cactophila is common to many species of cacti, P pseudocactophila is generally recovered only from cardon cactus and its near

337

42. Pichia E.C. Hansen emend. Kurtzman / C.R Kurtzman

relatives. Shen and Lachance (1993) identified a strain Additional assimilation tests and other growth of R cactophila by restriction fi-agment mapping that characteristics: Starch formation was initially classified as P. pseudocactophila because it 2-Keto-D-gluconate 5-Keto-D-gluconate Gelatin liquefaction produced four-spored asci and was isolated fi'om senita Saccharate Growth at 2>TC +/w cactus. This report suggests that accurate identification of 10% NaCl/5% glucose cactus yeasts will probably require molecular methods. Co-Q: 7, CBS 2283 (Yamada et al. 1973a). 42.72. Pichia quercuum Phaff & Knapp (1956) Synonym: Zymopichia quercibus (Phaff & Knapp) Novak & Zsolt (1961)

Mol% G + C: 40.0, 42.7, CBS 2283 {T^: Nakase and Komagata 1970b; BD: Kurtzman, unpublished).

Origin of the strain studied: From a slime flux of oak {Quercus kelloggii) (1). Type strain: CBS 2283 (NRRL YB-4281).

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (1.8-5.0)x(2.05.0) |im, and occur singly or in pairs. Growth is tannish- 42.73. Pichia rabaulensis Soneda & S. Uchida (1971) yellow, smooth, glistening and butyrous. Growth on 5% malt extract agar: After 3 days at Growth on the surface of assimilation media: 25T, the cells are ovoidal to elongate, (2.0-5.2)x(3.09.0) jJim, and occur singly, in pairs or occasionally in short Pellicles are not formed. chains. Growth is tannish-white, dull andfinelywrinkled. Dalmau plate culture on morphology agar: After Growth on the surface of assimilation media: Heavy, 7 days at 25''C, growth under the coverglass shows very dry, climbing pellicles are formed. poorly differentiated pseudohyphae and no true hyphae. Aerobic growth is grayish-white, smooth, glistening, and Dalmau plate culture on morphology agar: After butyrous with an entire to finely lobed margin. A faint 7 days at 25''C, growth under the coverglass shows abundant well-branched pseudohyphae, but relatively few acidic odor is present. blastoconidia are produced. True hyphae are not formed. Formation of ascospores: Asci are generally con- Aerobic growth is tannish-white, dull, and almost powjugated with the pairing between parent cell and bud dery, and with fine striations. Margins may be entire, or between independent cells. One to four hat-shaped serrate or lobed. A faint ester-like odor is sometimes ascospores are produced in each ascus, and they are produced. liberated soon after formation. The presence of conjuga- Formation of ascospores: Asci are unconjugated and tions between cells and their buds suggests the species is produce one to four hat-shaped spores. The spores are homothallic. liberated soon after formation. It is not known whether Ascospores were observed on 5% malt extract agar after the species is homothallic or heterothallic. 3 days at 25T. Ascospores were observed on 5% malt extract and YM agars after 3-10 days at 25°C. Fermentation: Fermentation: w Lactose Glucose + Lactose Glucose Raffinose Galactose w Raffinose Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Galactose Sucrose Maltose

Trehalose

Sucrose Maltose

+

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+ +

-

+

_

+ + +/w

-

+

Trehalose

w

+

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+ + + +

-

+ +

-

+ +

-

V

-

+ +

-

+

-

+ + + V

+ + + +

-

338

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Growth at 37T Saccharate 10% NaCl/5% glucose + Co-Q: 7, CBS 6797 (Billon-Grand 1985). Mol% G + C: 41.4, 44.2, CBS 6797 {T^ Billon-Grand 1981; BD: Kurtzman, unpublished).

Origin of the strain studied: Feces of an African snail, Rabaul, New Britain, Papua New Guinea (1). Type strain: CBS 6797 (NRRL Y-7945). Comments: The present findings are in agreement with the original description of P. rabaulensis. Soneda and Uchida (1971) reported growth on galactose to be positive whereas the response to erythritol was variable. In the present study, growth on both of these compounds was negative. 42.74. Pichia rhodanensis (C. Ramirez & Boidin) Phaff (1956) Synonyms: Saccharomyces rhodanensis C. Ramirez & Boidin (1953a) (also in C. Ramirez & Boidin 1953b) Petasospora rhodanensis (C. Ramirez & Boidin) Boidin & Abadie (1954) Zymopichia rhodanensis (C. Ramirez & Boidin) Novak & Zsolt (1961) Endomycopsis balearica Socias, C. Ramirez & Genestar (1954a) Endomycopsisfibuligera(Lindner) Dekker var. energica Verona & Zardetto de Toledo (1959a)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to elongate, (2.6-6.0) x (4.010.0) |im, and occur singly, in pairs or in chains. Growth is light tan, dull or glistening, and smooth or wrinkled, depending upon the abundance of pseudohyphae. Growth on the surface of assimilation media: Pellicles are sometimes present. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows abundant branched pseudohyphae with occasional verticillate clusters of blastoconidia. True hyphae are produced by some strains but not abundantly. Aerobic growth is light tan and may be dull or glistening and butyrous or somewhat tough and wrinkled, depending upon the abundance of hyphae and pseudohyphae. Colony margins are usually entire. Formation of ascospores: This heterothallic species is frequently isolated from nature in the diploid form, and the unconjugated asci produce one to four hatshaped ascospores. The spores are liberated soon after formation. Ascospores were observed on 5% malt extract agar after 10-20 days.

Fermentation: Glucose Galactose Sucrose Maltose

+

-

w/-

-

Lactose Raffinose Trehalose

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + +

-

+

-

+

-

+ +

-

+ + V V

+ + + +

+ Additional assimilation tests and other g rowth characteristics: 2-Keto-D-gluconate Starch formation Gelatin liquefaction 5-Keto-D-gluconate Saccharate Growth at 3TC + 10% NaCl/5% glucose Co-Q: 7, CBS 5518 (Yamada et al. 1973a). Mol% G + C: 50.2,51.9, CBS 5518 (7;^: Nakase and Komagata 1970b;

BD: Fuson et al. 1980, Kurtzman et al. 1980a).

Origin of the strains studied: Tanning liquor (4); stained leather (1); fermenting canaigre (1); palm nuts (1). Complementary mating types: NRRL YB-651 sm14 (CBS 4839) and NRRL Y-7854 Re-1 (CBS 7102). Type strain: CBS 5518 (NRRL Y-7854), from tanning liquor. Comments: As noted earlier, P rhodanensis is phenotypically similar to P amylophila, P euphorbiae, P mississippiensis, P meyerae, P wickerhamii and P ueronae, but none of these heterothallic species shows any mating response when paired with P rhodanensis. Furthermore, P rhodanensis shows little DNA relatedness with these other species (Kurtzman et al. 1980a). 42.75. Pichia salicaria^ Phaff, M.W. Miller & Spencer (1964) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (1.7-4.5) x (2.3-7.2) |im, and occur singly or in pairs. Growth is tannish-yellow, smooth, dull-glistening and butyrous. Growth on the surface of assimilation media: Heavy, climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass has neither

The original spelling of the species epithet salictaria has been treated as an orthographic error.

339

42. Pichia E.C. Hansen emend. Kurtzman / C.R Kurtzman

42.76. Pichia scolyti (Phaff & Yoneyama) Kregervan Rij (1964b) Synonyms: Endomycopsis scolyti Phaff & Yoneyama (1961) Yamadazyma scolyti (Phaff & Yoneyama) Billon-Grand (1989)

/Jfi o ^

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to ellipsoidal, (1.2-3.2)x(2.07.8) |J.m, and occur singly, in pairs and in chains. Growth is white to cream-colored, dull to glistening, and frequently finely wrinkled.

• ^ ^

Growth on the surface of assimilation media: Rings and, occasionally, thin pellicles may form.

A Fig. 149. /? salicaria, CBS 5456. Ascosporogenous culture after 3 days, 25''C, on 5% malt extract agar. Bar=5 [im.

pseudohyphae nor true hyphae. Aerobic growth is tannishwhite, smooth, dull-gUstening, and butyrous. Margins are generally lobed. A faintly acidic odor is produced. Formation of ascospores: Asci may be unconjugated or show conjugation between a parent cell and a bud, or between independent cells. One to four hat-shaped spores are formed per ascus and they are quickly liberated (Fig. 149). The presence of conjugation between cells and their buds suggests the species to be homothallic. Ascospores were observed on 5% malt extract agar after 3 days at 25°C. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi-ee

+ + + + + + + + + -

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate + Gelatin liquefaction 5-Keto-D-gluconate + Growth at 37T + Saccharate 10% NaCl/5% glucose Co-Q: 7, CBS 5456 (Yamada et al. 1973a). Mol% G + C: 37.8, CBS 5456 {T^ : Nakase and Komagata 1970b).

Origin of the strains studied: Slime flux of willows {Salix sp.) (2); human toe (1). Type strain: CBS 5456 (NRRL Y-6780).

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant moderately branched pseudohyphae with occasional dense clusters of blastoconidia. Some blastoconidia have an elongated triangular appearance. True hyphae may also be present. Aerobic growth is white to tannish-white, dull or glistening, frequently finely wrinkled, and occasionally papillate. Margins are irregularly serrate. Formation of ascospores: This species is heterothallic and usually isolated from nature in the haploid form, although at least one diploid has been recovered as a natural isolate. Many of the haploids show little mating and such pairs form few ascospores. Asci produce one to four hat-shaped ascospores which are liberated soon after formation. Ascospores were observed on 5% malt extract agar after 2-20 days at 25T. Fermentation: Glucose Galactose Sucrose Maltose

ws ws w/w/-

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + + + + s -

340

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction w/Saccharate Growth at 3 7 T v 10% NaCl/5% glucose v Co-Q: 9, CBS 4802 and 3 additional strains (Yamada et al. 1973a). Mol% G + C: 36.3, 40.1, CBS 4802 (7;,: J.B. Fiol cited by Billon-Grand 1981; BD: Fuson et al. 1980).

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Origin of the strains studied: From frass of the bark beetle Scolytus ventralis in fir {Abies concolor), California (3); frass in Balsam fir (Abies balsamea), On+ tario, Canada (1); from Douglas fir beetle {Dendroctonus pseudotsugae), Washington (2). + Complementary mating types: NRRL Y-5512 (CBS + 4802) and NPIRL Y-5513 (CBS 4803), from Phaff and + Yoneyama (1961); NRRL YB-1403-1 (CBS 5731) and NRRL YB-1403-2 (CBS 5732), isolated by Wickerham Additional assimilation tests and other growth from frass obtained in Ontario, Canada. These latter characteristics: haploids seem to have greater mating competence. Starch formation 2-Keto-D-gluconate + Gelatin liquefaction w/Type strain: CBS 4802 (NRRL Y-5512), from frass 5-Keto-D-gluconate Growth at 3 7 T Saccharate of Scolytus uentralis. 10% NaCl/5% glucose

42.77. Pichia segobiensis Santa Maria & Garcia Aser (1977) Synonym: Yamadazyma segobiensis (Santa Maria & Garcia Aser) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2.0-4.5) x (2.56.3) |im, and occur singly and in pairs. Growth is tannishwhite, smooth, glistening, and butyrous. Growth on the surface of assimilation media: Rings and, occasionally, thin pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows infrequent and poorly differentiated pseudohyphae. True hyphae are not formed. Aerobic growth is light tannishwhite, smooth to occasionally slightly papillate, moderately glistening, butyrous, and with an entire to sparingly lobed margin. A faint acidic odor is formed. Formation of ascospores: Conjugation between a parent cell and a bud or between independent cells may precede ascus formation. One, but usually two hat-shaped ascospores are formed in each ascus, and they are readily liberated. The mode of conjugation suggests the species to be homothallic. Ascospores were observed on 5% malt extract agar after 3-10 days at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

+ +

-

Lactose Raffinose Trehalose

Co-Q: 9, CBS 6857 (Billon-Grand 1985). Mol% G + C: 41.0, 42.0, CBS 6857 {T^ Kurtzman, unpublished).

Billon-Grand 1981; BD:

Origin of the strains studied: From an adult larva of the insect Calcophora mariana massiliensis in Scotch pine (Pinus silvestris) (1); insect frass in the bark of P. silvestris (1); larva of the long-horned beetle Rhagium inquisitor (1). Type strain: CBS 6857 (NRRL Y-11571), from a larva of Calcophora mariana massiliensis. Comments: Results from the present study are in good agreement with the original description of P segobiensis. The only difference noted was that Santa Maria and Garcia Aser (1977) reported growth on D-arabinose to be negative, whereas it was slow but positive in the current examination. P. segobiensis, P. stipitis, Candida shehatae and Pachysolen tannophilus are of interest to biotechnologists because of their ability to fermentatively produce ethanol from D-xylose, a major pentose in plant biomass (Toivola et al. 1984). With the exception of P segobiensis, the phylogenetic relationships among xylose-fermenting species are discussed under P. stipitis. More recently, comparisons of nDNA complementarity have shown ca. 40% relatedness between P. segobiensis and P. stipitis, demonstrating the two taxa to be sibling species (Kurtzman and Robnett, unpublished). 42.78. Pichia silvicola (Wickerham) Kurtzman (1984a) Synonyms: Hansenula silvicola Wickerham (1951) Endomycopsis muscicola Nakase & Komagata (1966) Hansenula muscicola (Nakase & Komagata) Yarrow (1972) Pichia muscicola (Nakase & Komagata) Kurtzman (1984a)

341

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ellipsoidal to elongate, (1.0-4.0) x( 1.29.5) |im and occur singly, in pairs, or in small clusters. Growth is butyrous to mycelial and tannish-white in color. Growth on the surface of assimilation media: Exceptionally thin pellicles are formed by some isolates and thin rings may be produced. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and highly branched pseudohyphae. True hyphae are occasionally detected. Aerobic growth is white to tannish-white, smooth, glistening or dull, and butyrous. Colony margins are entire or occasionally lobed and may show hyphal outgrowths. An ester-like odor is usually present. Formation of ascospores: Asci may be unconjugated or show conjugation between parent and bud, or between independent cells. Asci form one to four hat-shaped ascospores that are freed when the ascus deliquesces (Fig. 150). Single-spore isolates obtained from fourspored asci of the type strain formed ascosporogenous colonies, and the species is presumed to be homothallic (Kurtzman, unpublished). Ascospores were observed on 5% malt extract agar after 5-20 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w -

Lactose Raffinose Trehalose

-

+ +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

V V V

+ V

V

-

+ +

-

V

+

+ + V

+

-

V

+ + + + V

+ V

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC v 10% NaCl/5% glucose Co-Q: 7, CBS 1705, CBS 5800, and 3 additional strains (Yamada et al. 1973a). Mol% G + C: 34.1-35.1, CBS 1705 and 3 additional strains {T^\ Nakase and Komagata 1971b); 36.5, CBS 1705 (BD: Kurtzman, unpubUshed).

'•o'^

#**

m

€»•

:-'y^}::y^

o

TC

Fig. 150. P. siluicola, CBS 1705. Ascosporogenous culture after 8 days, 2 5 ^ , on 5% malt extract agar. Bar = 5 [Am.

Origin of the strains studied: Gums from wild black cherry trees (Prunus serotina Ehrh.), Peoria, Illinois, U.S.A. (3); gums from wild pin cherry trees (Prunus pensylvanica Linn.), Wisconsin and Vermont, U.S.A. (4); the type strain of P muscicola (CBS 5800, NRRL Y-7005) and two additional strains of this taxon, from moss, Tottori Prefecture, Japan. Type strain: CBS 1705 (NRRL Y-1678), isolated from gum of P. serotina, Peoria, Illinois. Comments: In a comparison of sequences from the 5'-end of large subunit rRNAs, Kurtzman and Robnett (manuscript in preparation) noticed that P. siluicola and P muscicola differed by just one nucleotide in this variable region. On the basis of earlier work, this result indicates that P. muscicola and P siluicola are conspecific. 42.79. Pichia spartinae Ahearn, Yarrow & Meyers (1970) Synonym: Yamadazyma spartinae (Ahearn, Yarrow & Meyers) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ellipsoidal, (2.55.3)X(3.3-6.5) (im, and occur singly, in pairs or occasionally in short chains. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Thin rings are formed and occasionally pellicles are present. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows only occasional pseudohyphae, but these are moderately branched and may bear blastoconidia. True hyphae are not formed. Aerobic growth is light tan, smooth, glistening and butyrous. Margins are entire to lobed. Formation of ascospores: Asci are unconjugated or conjugated if formed from the pairing of complementary mating types. Occasionally one, but usually, two, hatshaped ascospores form in one of the conjugants while the other remains empty. Asci become deliquescent at maturity. The type strain, NRRL Y-7322 (CBS 6059), is

Vb. Descriptions of teleomorphic ascomycetous genera and species

342

now asporogenous, but conjugates and sporulates when paired with mating type NRRL Y-7665-3. Ascospores were observed on 5% mah extract agar after 5-7 days at 25"C. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ w/-

+

-

+ + + + +

-

+

-

Lactose Raffinose Trehalose

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

-

+ s

-

+

-

+ + + + V

w/+ +

-

+

-

Additional assimilation tests and other growth characteristics:

Starch formation 2-Keto-D-gluconate + Gelatin liquefaction 5-Keto-D-gluconate Growth at 37T Saccharate 10% NaCl/5% glucose + Co-Q: 9 (Billon-Grand 1989). Mol% G + C: 38.0, 41.1, CBS 6059 (7;„ Billon-Grand 1981; BD: Kurtzman, unpublished).

Origin of the strains studied: From oyster grass (Spartina alterniflom Loisel) marshes, Barataria Bay, Louisiana, U.S.A. (7). Complementary mating types: NRRL Y-7665-1 (CBS 6666) and NRRL Y-7665-3 (CBS 6669). Type strain: CBS 6059 (NRRL Y-7322).

42.80. Pichia stipitis Pignal (1967) Synonym: Yamadazyma stipitis (Pignal) Billon-Grand (1989)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2.2-4.5) x(2.56.0) [i-m, and occur singly or in pairs. Growth is creamcolored, dull-glistening, smooth to faintly wrinkled and butyrous. Growth on the surface of assimilation media: Rings and incomplete pellicles may form. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and well-branched pseudohyphae with occasional blastoconidia. True hyphae are not formed. Aerobic growth is light tan, smooth to finely wrinkled, dullglistening, butyrous, and with an entire to lobed margin. A faintly acidic odor is often present. Formation of ascospores: Preceding ascus formation, there may be conjugation between a parent cell and a bud or between independent cells, or the ascus may be unconjugated but with a protuberance. Asci produce two hat-shaped ascospores that are released soon after formation (Fig. 151). Single-spore isolates produce ascosporogenous colonies, but because only two ascospores are formed in each ascus, it is not certain whether meiosis has occurred (Kurtzman 1990b). The presence of parent cell-bud conjugation suggests the species is homothallic. Ascospores were observed on 5% malt extract agar after 3-5 days at 25T.

W ^ ® * ti|Jl^f^#

tt

Comments: In the original description, ascospores of P. spartinae were reported to be spheroidal or infrequently oval with a slight ledge (Ahearn et al. 1970). Later, ^ Kurtzman and Ahearn (1976) showed a high incidence of malformed spores among strains of P. spartinae, and that Fig. \5\. P. stipitis, CBS 5773. Ascosporogenous mature spores were hat-shaped rather than spheroidal. 25°C, on 5% malt extract agar. Bar = 5 ^im. Pichia spartinae is phenotypically similar to several other heterothallic species of Pichia and to certain species of Candida. However, there was no mating response between P spartinae and P angophorae, P rhodanensis, Fermentation: + Glucose Lactose P wickerhamii, P veronae, Candida freyschussii, C mar- Galactose w Raffinose itima, C obtusa, or C oregonensis (Kurtzman and Ahearn Sucrose Trehalose 1976). Maltose +

o^

Q e« culture after 1 week,

343

42. Pichia E. C. Hansen emend. Kurtzman / C.R Kurtzman

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ + + + V

-

+

-

+ + V

+ + + +

jV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

-

+ + + + V

+ + +

-

+

-

Additional assimilation tests and other g;roi characteristics: 2-Keto-D-gluconate Starch formation + Gelatin liquefaction 5-Keto-D-gluconate Saccharate Growth at 37°C V 10% NaCl/5% glucose

V

Co-Q: 9, CBS 5773 (Billon-Grand 1989). Mol% G + C: 42.6, CBS 5773 (BD: Miranda et al. 1982); 43.2^3.6, CBS 5773 and 4 additional strains (BD: Kurtzman 1990b).

Origin of the strains studied: From larvae of the insects Cetonia sp., Dorcus parallelipipedus and Laphria (4); from J. Santa Maria (1). Type strain: CBS 5773 (NRRL Y-7124), from insect larvae.

Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25*^0, growth under the coverglass shows pseudohyphae but no true hyphae. Some strains produce only occasional, sparingly branched pseudohyphae while others form considerable pseudomycelium that may be well-branched and bear clusters of blastoconidia. Aerobic growth is pale tannish-white, smooth to finely wrinkled, dull-glistening and butyrous. Margins may be serrate or lobed. A faint ester-like odor is often present. Formation of ascospores: Asci form without prior conjugation and contain one to four hat-shaped ascospores which are readily liberated. Kreger-van Rij (1964b) reported this species to be heterothallic. Ascospores were observed on 5% malt extract agar after 3 days at 25T. Fermentation: Glucose Galactose Sucrose Maltose

42.81. Pichia strasburgensis (C. Ramirez & Boidin) Phaff (1956) Synonyms: Saccharomyces strasburgensis C. Ramirez & Boidin (1953a) (also in C. Ramirez & Boidin 1953b) Petasospora strasburgensis (C. Ramirez & Boidin) Boidin & Abadie (1954) Zymopichia strasburgensis (C. Ramirez & Boidin) Novak & Zsolt (1961)

Growth on 5% malt extract agar: After 3 days at 25T, the cells are ovoidal to ellipsoidal, (1.5-4.5) x (2.914.0) jJim, and occur singly or in pairs. Growth is creamcolored, smooth, faintly glistening and butyrous.

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Comments: P. stipitis, P. segobiensis, Candida shehataeLactose and Pachysolen tannophilus are of industrial interest Melibiose because they ferment D-xylose to ethanol. On the basis of Raffinose phenotypic similarity, Kreger-van Rij (1970c) suggested Melezitose Inulin that P stipitis and C shehatae may represent teleomorphic Soluble starch and anamorphic states of the same species. Vaughan- D-Xylose Martini (1984), however, found that there was little nDNA L-Arabinose relatedness between type strains of the two taxa. Kurtzman D-Arabinose (1990b) showed from rRNA sequence comparisons that D-Ribose L-Rhamnose P stipitis and C shehatae are closely related but separate D-Glucosamine

species. In contrast, P tannophilus is more distantly related.

+ +/w +

+ +

-

+ + + +

-

+ +

-

+ +

V

+

-

w

-

+ +

-

+

-

+ + + + + + + +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

+

Starch formation Gelatin liquefaction Growth at 37T

v

Co-Q: 7, CBS 2939 (Yamada et al. 1973a). Mol% G + C: 40.2, 40.6, CBS 2039 {T^: Nakase and Komagata 1970b; BD: Fuson et al. 1980).

Origin of the strains studied: Stained leather, from Ramirez (2) and from Boidin (1). Complementary mating types: CBS 2039 (NRRL Y-11980) and CBS 5005 (NRRL Y-11981). Type strain: CBS 2939 (NRRL Y-2383), from stained leather.

Vb. Descriptions of teleomorphic ascomycetous genera and species

344

42.82. Pichia subpelliculosa Kurtzman (1984a) Synonyms: Hansenula subpelliculosa Bedford (1942) nom. nud. Endomycopsis subpelliculosa (Bedford) Novak & Zsolt (1961) nom. nud. Hansenula anomala (E.G. Hansen) H. & P. Sydow var. subpelliculosa K. Kodama, Kyono & S. Kodama (1957) nom. nud. Hansenula subpelliculosa Bedford ex J.A. Bamett, Payne & Yarrow (1983) Pseudohansenula peiping Mogi (1942) nom. nud. Hansenula arabitolgenes Fang nom. nud.? (Chang et al. 1963)

Growth on 5% malt extract agar: After 3 days at 25^C, the cells are ellipsoidal, (1.9-5.1)x(3.4-9.2)Vm, and occur singly or in pairs. Growth is white to tannishwhite and butyrous. Growth on the surface of assimilation media: Thin pellicles are occasionally formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass usually shows abundant and highly branched pseudohyphae, although some strains fail to produce any pseudohyphae. True hyphae are formed, but they are not common. Aerobic growth is white to tannish-white, smooth, glistening, and butyrous. Colony margins are usually lobed and devoid of pseudohyphal outgrowths. A faint, pleasant odor may be detected. Formation of ascospores: Asci are unconjugated and form one to four hat-shaped ascospores. The asci become deliquescent at maturity. Wickerham and Burton (1954a) demonstrated this species to be heterothallic by heattreatment of sporogenous cultures. Ascospores were observed on 5% malt extract and V8 agars after 5-10 days at 25^C. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

Lactose Raffinose Trehalose

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

w

-

V

+ V

-

+ + V

+

-

+ V

V V V V V

-

+ + + V

-

+ + + + + + + +

-

+

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction w/Saccharate Growth at 37*'C v 10% NaCl/5% glucose + Co-Q: 7, CBS 5767 and 3 additional strains (Yamada et al. 1973a). Mol% G + C: 33.4-33.9, AJ 5343, AJ 5344, AJ 5345 {T^\ Nakase and Komagata 1971b); 34.0, CBS 5767 (BD: Kurtzman, unpublished).

Origin of the strains studied: Bedford's strains from sugar-egg concentrate (1), syrup (1), grape juice (1), and dried prunes (1); Etchell's strains from fermenting cucumbers and from brined unshelled peas and green beans (27); soy sauce manufacturing, China (1); miso (1); NRRL YB-3328, Pseudohansenula peiping; CBS 7164 (NRRL Y-17244), Hansenula arabitolgenes. Complementary mating types: NRRL Y-1683-11 (CBS 1997) and NRRL Y-1822-12 (CBS 1996). Type strain: CBS 5767 (NRRL Y-1683), from fermenting cucumbers. Comments: Hansenula subpelliculosa was described by Bedford (1942) without benefit of a Latin diagnosis or the designation of a type strain. In the transfer of hatspored species oi Hansenula to Pichia, Kurtzman (1984a) provided the requisite Latin description and designated as type strain an isolate from fermenting cucumber brines that Wickerham (1951) found to be typical of the species. Bamett et al. (1983) also provided a Latin description of this species, but their validation was for Hansenula subpelliculosa and would require further emendation if it were to be used. P. subpelliculosa, P. anomala and P. fabianii are quite similar when compared by the standard tests. P anomala is separated from the other two species by growth in vitaminfree medium, and P subpelliculosa is separated from P fabianii by ability to assimilate erythritol. Wickerham and Burton (1954a) indicated that these three heterothallic taxa do not interbreed. Kurtzman and Robnett (manuscript in preparation) compared the 5'-end sequences of large subunit rRNAs for all known species of Pichia. P. subpelliculosa and Hansenula arabitolgenes have identical sequences suggesting that they are conspecific. H. arabitolgenes appears to have been published without a Latin description. 42.83. Pichia sydowiorum (D.B. Scott & van der Walt) Kurtzman (1984a) Anamorph: Candida nitrativorans van der Walt, D.B. Scott & van der Klift Synonyms: Hansenula sydowiorum D.B. Scott & van der Walt (1970a) Candida nitrativorans van der Walt, D.B. Scott & van der Klift (1972)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.85.3)x(2.7-7.8)|im, and occur singly or in pairs. Growth is butyrous and light tannish-white in color. Grow^th on the surface of assimilation media: Pellicles form and are smooth and waxy.

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant and well-branched pseudohyphae. True hyphae are not produced. Aerobic growth is white, smooth, dull to moderately glistening, and butyrous. Colony margins are generally lobed. Formation of ascospores: Asci are unconjugated. Scott and van der Walt (1970a) reported vegetative cells to first become lipid-rich and thick-walled, and following a dormant period, an outer membrane is shed to form the ascus. One to four hat-shaped ascospores are formed per ascus, and asci are deliquescent. Heat-treatment of sporogenous cultures gave only sporogenous colonies, and the species is presumed to be homothallic (Scott and van der Wah 1970a). Ascospores were observed on YM and 5% malt extract agars after 10 days at 15"C. Fermentation: Glucose Galactose Sucrose Maltose

+ +/w + v

Lactose Raffinose Trehalose

w s

+ + + + + + + + + v V + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + + + + + +

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 36.2, CBS

+

Starch formation Gelatin liquefaction Growth at 2>TC

w/-

5995 (HPLC: Miller and Baharaeen 1979).

Origin of the strains studied: Frass from tunnels of the Bostrichid beetle (Sinonylon ruficorne Fahr.), infesting Combretum apiculatum Sond. (3); frass from tunnels in Mimusops caffra (1), all from South Africa. Type strain: CBS 5995 (NRRL Y-7130), from tunnels in S. ruficorne. Comments: R sydowiorum is similar to R ciferrii and R anomala but the three species can be separated by their assimilation reactions on L-rhamnose and melibiose.

345

As noted earlier, R ciferrii forms crystals of tetraacetylphytosphingosine whereas R sydowiorum synthesizes 2-D-hydroxyhexadecanoic acid (Vesonder et al. 1970). Crystalline compounds have not been observed in cultures of/? anomala. In contrast to the original description which reported the assimilation of soluble starch and D-xylose to be positive, two of the four strains of R sydowiorum examined in the present study gave negative reactions on these compounds. In addition, two of the strains failed to ferment maltose. 42.84. Pichia tannicola F.H. Jacob (1969a)

Synonym: Pichia abadieae F.H. Jacob (1969b)

Growth on 5% malt extract agar: After 3 days at IS^'C, the cells are spheroidal to ellipsoidal, (1.24.l)x(2.0-5.4) |im, and occur singly or in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Thin climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25*^0, growth under the coverglass shows occasional, sparingly branched pseudohyphae, but no true hyphae. Aerobic growth is light tannish-white in color, smooth, glistening and butyrous with a finely serrate margin. Formation of ascospores: Ascospores were not observed in the present study. Jacob (1969a,b) reported the asci, which became deliquescent, to produce one to four subspheroidal ascospores devoid of surface ornamentation. Asci were unconjugated or showed conjugation between a cell and its bud. Ascospores were observed on sterilized carrot slices (Jacob 1969a,b). Fermentation:

Glucose Galactose Sucrose Maltose

+/w ws -

Lactose Raffinose Trehalose

+/w

+ + + v + + + + +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + w/+ s s + w/s + +/w v -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

346

Vb. Descriptions of teleomorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 40.7, CBS 6065 {T^\ J.B. Fiol cited by Billon-Grand 1981); 46.0, 43.0, CBS 6067 {T^: Fiol and Billon-Grand 1981; BD: Kurtzman, unpublished).

Origin of the strains studied: CBS 6067 (NRRL Y-7499), type strain, P. abadieae; CBS 6065 (NRRL Y-17392), type strain, P. tannicola; both from tanning fluid, France. Type strain: CBS 6065. Comments: P abadieae and P tannicola were separated from one another because of differences in their assimilation of lactose, erythritol, D-gluconate and inositol. However, Kurtzman and Robnett (unpublished) determined that type strains of the two species showed 100% nDNA complementarity. Because of taxonomic priority, P abadieae is a synonym of P tannicola. 42.85. Pichia thermotolerans (Starmer, Phaff, Miranda, M.W. Miller & Barker) Holzschu, Phaff, Tredick & Hedgecock (1985) Synonym: Pichia opuntiae Starmer, Phaff, Miranda, M.W. Miller & Barker var. thermotolerans Starmer, PhafF, Miranda, M.W. Miller & Barker (1979)

Growth on 5% malt extract agar: After 3 days at 25T, the cells are ovoidal to ellipsoidal, (1.5^.5)x(2.57.5)jjim, and occur singly, in pairs or in short chains. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Thin rings and incomplete pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows infrequent rudimentary pseudohyphae but no true hyphae. Aerobic growth is light tannish-white, smooth, glistening, butyrous, and low convex with entire to finely lobed margins. A faintly acidic odor is present. Formation of ascospores: This species is heterothallic, and the majority of strains isolated from nature are asporogenous haploids. Following the pairing of complementary mating types, zygotes usually bud diploid cells which become asci. Each ascus contains two to four hat-shaped ascospores which are liberated soon after formation. Ascospores were not seen in the present study, and Starmer et al. (1979) commented that formation of asci is extremely rare. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

-

+ V

-

+

-

+ +

V Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation Gelatin liquefaction 5 -Keto-D-gluconate Growth at 37''C Saccharate + 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 32.8-33.0^, CBS 7012 and 5 additional strains (BD: Holzschu et al. 1985).

Origin of the strains studied: CBS 7012 (UCDFST 76-211, NRRL Y-11709), from senita cactus {Lophocereus schottii), Rancho Cunano, Baja California Sur, Mexico; CBS 7013 (UCD-FST 76-385B, NRRL Y-11710), from soil under cardon cactus {Pachycereus pringlei), Mulege, Baja California Sur, Mexico. Complementary mating types: CBS 7012 (h^) and CBS 7013 ( r ) . Type strain: CBS 7012. Comments: P thermotolerans was initially described as a variety of P opuntiae because some mating was shown between the two taxa (Starmer et al. 1979). Holzschu et al. (1985) reexamined the relationship, noting that intervarietal matings produced only a few ascospores of unknown viability, that the varieties averaged 28% nDNA complementarity, and that allozyme patterns suggested the two varieties to be genetically isolated. From these data, the variety thermotolerans was elevated to species status. P antillensis is closely related to P opuntiae and P thermotolerans, showing 50% and 26% nDNA complementarity, respectively, to the two species (Starmer et al. 1984). However, P antillensis exhibited no mating response when paired with either P opuntiae or P thermotolerans. Lachance et al. (1988) and Starmer et al. (1990) reviewed the genetics and biogeography of the cactus yeasts. 42.86. Pichia toletana (Socias, C. Ramirez & Pelaez) Kreger-van Rij (1964b) Synonyms: Debaryomyces toletanus Socias, C. Ramirez & Pelaez (1954b) Zymodebaryomyces toletanus (Socias, C. Ramirez & Pelaez) Novak & Zsolt (1961)

341

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (1.5-5.0)x(3.0-9.7) ^im, and occur singly and in pairs. Growth is yellowish-white, smooth to wrinkled and dull-glistening. Growth on the surface of assimilation media: Thin pellicles are formed by some strains. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, branched pseudohyphae with blastoconidia in a verticillate arrangement. True hyphae are not formed. Aerobic growth is tannish-white, smooth to wrinkled, dullglistening and butyrous. Margins are usually lobed. Formation of ascospores: Conjugation of a parent cell and a bud usually precedes ascus formation. Asci contain one to four hat-shaped ascospores which may be quickly or slowly liberated. Single-spore isolates from four-spored asci are sporogenous, indicating the species to be homothallic. Ascospores were observed on 5% malt extract agar after 2-7 days at 25^C. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/w + + + + v + v +/w + ws -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

-

Starch formation Gelatin liquefaction Growth at 2)TC

Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is tannish-white, smooth, gUstening and butyrous. Margins are entire. Formation of ascospores: Ascus formation may be preceded by conjugation between a parent cell and a bud or between independent cells. Cells with protuberances are also found in sporulating cultures. Two to four hat-shaped ascospores are formed per ascus and they are quickly liberated. The presence of conjugation between cells and their buds suggests that the species is homothallic. Ascopores were observed on 5% malt extract and YM agars after 7-10 days at 25°C. Fermentation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

42.87. Pichia trehalophila Phaff, M.W. Miller & Spencer (1964) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.16.8)X(3.5-7.5) |im, and occur singly and in pairs. Growth is tannish-yellow, smooth, glistening and butyrous.

~

Co-Q: 7, CBS 2504 (Yamada et al. 1973a). Mor/o G + C: 39.3, 39.6, CBS 2504 {T^\ Nakase and Komagata 1970b; BD: Kurtzman 1987a).

Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

v

Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate 10% NaCl/5% glucose

Starch formation Gelatin liquefaction Growth at 37°C w/-

Co-Q: 7, CBS 5361 (Yamada et al. 1973a). Mol% G + C: 34.6, 37.6, CBS 5361 {T^\ Nakase and Komagata 1970b; BD: Kurtzman, unpublished).

Origin of the strains studied: Tanning fluid (1); Drosophila miranda (1); frass of dead pine (Pinus sp.) (1); diseased fir (Abies nobilis) (1). Origin of the strains studied: Slime flux of Type strain: CBS 2504 (NRRL YB-4247), from Cottonwood (Populus trichocarpa), California (2). Type strain: CBS 5361 (NRRL Y-6781). tanning fluid.

Vb. Descriptions of teleomorphic ascomycetous genera and species

348

42.88. Pichia triangularis M.Th. Smith & Batenburg-van der Vegte (1986a)

Additional assimilation tests and other characteristics:

Anamorph: Candida polymorpha Ohara & Nonomura ex M.Th. Smith & Batenburg-van der Vegte Synonyms: Candida polymorpha Ohara & Nonomura (1954c) nom. nud. Candida polymorpha Ohara & Nonomura ex M.Th. Smith & Batenburg-van der Vegte (1986a)

2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 3TC 10% NaCl/5% glucose + Co-Q: 9, Candida polymorpha (Yamada and Kondo 1972a). Mol% G + C: 32.4, 36.6, CBS 4094 {T^\ Nakase and Komagata 1971f, Meyer and Phafif 1972).

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal to ellipsoidal to elongate, ( 2 . 1 4.3)X(3.1-9.5) jim, and often with irregular shapes, which most commonly are somewhat triangular or obpyriform. The cells occur singly, in pairs and in small clusters. Growth is butyrous, white to tannish-white, and dullglistening. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows only poorly developed pseudohyphae. True hyphae are not formed. Aerobic growth is butyrous, white to tannishwhite, dull, and with a finely striated surface that becomes convoluted. Colonies are raised but with a generally flat surface. A faintly acidic odor is produced. Formation of ascospores: Asci are unconjugated and form one to four hat-shaped ascospores. Asci deliquesce at maturity. It is unknown whether the species is homothallic or heterothallic. Ascospore formation was observed on 5% malt extract agar and Difco yeast morphology agar after 5-7 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

w/-

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/w

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

growth

Origin of the strain studied: The isolate of Ohara and Nonomura (1954c), from tamari soya, Japan. Type strain: CBS 4094 (NRRL Y-5714). Comments: Results from the present study are in agreement with the description of Smith and Batenburgvan der Vegte (1986a) except that salicin was not assimilated. The unusually shaped vegetative cells of R triangularis are somewhat similar to those of Candida diddensiae. 42.89. Pichia veronae K. Kodama (Kodama & Kyono 1974b) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.56.5)x(4.9-8.0)|im, and occur singly or in pairs. Growth is cream colored, faintly glistening and butyrous. Growth on the surface of assimilation media: Thin climbing pellicles are present. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows wellbranched pseudohyphae with abundant blastoconidia. True hyphae are not formed. Aerobic growth is white, smooth, faintly glistening and butyrous. Margins may be entire or finely lobed. A faintly acidic odor is produced. Formation of ascospores: Asci are unconjugated and produce two to four hat-shaped ascospores (Fig. 152). The spores are liberated soon after formation. This species is heterothallic. Ascospores were observed on 5% malt extract and YM agars after 3-5 days at 25''C.

I

m4J

.•-*

Fig. 152. P. ueronae, CBS 6591. Ascosporogenous culture after 3 days, 25°C, on 5% malt extract agar. Bar = 5 jim.

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+

-

+ + + +

-

w +

-

+ +

-

+

-

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol (x-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+ + + w + + + w

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2>TC 10% NaCl/5% glucose Co-Q: 7, CBS 6591 (Billon-Grand 1985). Mol% G + C: 46.6, 49.5, CBS 6591 (T, Kodama and Kyono BD: Kurtzman 1987a).

-

1974b;

Origin of the strain studied: Exudate of the horse chestnut Aesculus turbinata, Japan (1). Complementary mating types: NRRL Y-7818-1 (CBS 6895) and NRRL Y-7818-10 (CBS 6896), derived as single-spore isolates from the type strain (Kurtzman, unpublished). Type strain: CBS 6591 (LKB-325, NRRL Y-7818).

349

Growth on the surface of assimilation media: Pellicles are present. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant well-branched pseudohyphae bearing blastoconidia that may be single or in small verticillate clusters. The presence of true hyphae is questionable. All hyphae examined seemed to have slight constrictions at the septa rather than parallel walls as would be expected of true hyphae. Aerobic growth is light tannish-white, usually dull, wrinkled and somewhat mycelial. Margins are generally entire. An ester-like odor is present. Formation of ascospores: Asci are unconjugated when formed by diploid strains of this heterothallic species, or conjugated if produced by the pairing of complementary mating types. Two to four hat-shaped ascospores form in each ascus and they are readily liberated. Ascospores were observed on 5% malt extract agar after 3-7 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

-

+ + + + v + + v + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + + + -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Comments: Results obtained in the present study correspond well with the original description. Exceptions concern raffinose and L-arabinose on which Kodama (Kodama and Kyono 1974b) found no growth, but which Additional assimilation tests and other growth were latently utilized in the present comparison. No characteristics: +/w Starch formation mating response has been observed between P. veronae 2-Keto-D-gluconate + Gelatin liquefaction v 5-Keto-D-gluconate and the phenotypically similar species R rhodanensis, Saccharate Growth at 37T + P. wickerhamii, P amylophila and P mississippiensis. 10% NaCl/5% glucose +/w 42.90. Pichia wickerhamii (van der Walt) Kregervan Rij (1964b) Synonym: Endomycopsis wickerhamii van der Walt (1959b)

Growth on 5% malt extract agar: After 3 days at 25T, the cells are ovoidal to elongate, (1.7-5.0)x(2.512.0) |im, and occur singly, in pairs and in chains. Growth is tannish-yellow, somewhat wrinkled, and dull to faintly glistening.

Co-Q: 7, CBS 4107 (Yamada et al. 1973a). Mol% G + C: 43.2, 45.6, 46.5, CBS 4107 {T^: Nakase and Komagata 1970b; BD: Fuson et al. 1980, Kurtzman et al. 1980a).

Origin of the strains studied: Frass of snout moth (Pyralidae) larvae in Encephalartos sp. (3). Complementary mating types: NRRL Y-2435-9 (CBS 7100) and NRRL Y-2435-10 (CBS 7101), derived as single-spore isolates from the type strain. Type strain: CBS 4107 (NRRL Y-2435). Comments: In comparisons of phenotypically similar

Vb. Descriptions of teleomorphic ascomycetous genera and species

350

species, P. wickerhamii failed to show any mating response with R amylophila, P. mississippiensis, P rhodanensis or P veronae. Furthermore, P wickerhamii showed only minimal nDNA relatedness with these other species (Kurtzman et al. 1980a). 42.91. Pichia xylosa Phaff, M.W. Miller & Shifrine (1956) Synonym: Zymopichia xylosa (Phaff, M.W. Miller & Shifrine) Novak & Zsolt (1961)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are ovoidal, (1.5-5.0)x(3.0-9.7)|im, and occur singly and in pairs. Growth is yellowish-white, smooth to wrinkled, and dull-glistening. Growth on the surface of assimilation media: Thin pellicles are formed by some strains. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, branched pseudohyphae with blastoconidia in a verticillate arrangement. True hyphae are not formed. Aerobic growth is tannish-white, smooth to wrinkled, dull-glistening and butyrous. Margins are usually lobed. Formation of ascospores: Conjugation of a parent cell and a bud usually precedes ascus formation. Asci contain one to four hat-shaped ascospores and these may be quickly or slowly liberated. Single-spore isolates from four-spored asci are ascosporogenous, indicating the species to be homothallic. Ascospores were observed on 5% malt extract agar after 3-7 days at 25^C.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

w/-

Lactose Raflfinose Trehalose

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ + + V

V

-

+

-

+/w V

-

+

-

+ +

-

+ +

V

+ V

+/w + V

-

Additional assimilation tests and other characteristics:

growth

Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Growth at 37°C Saccharate 10% NaCl/5% glucose Co-Q: 7, IFO 950 (Yamada et al. 1973a). Mol% G + C: 39.9^0.4, CBS 2286, 7206, 7207 (BD: Kurtzman 1987a, unpublished).

Origin of the strains studied: CBS 2286 was isolated by Phaff et al. (1956) from a fruit fly (Drosophila miranda) in California. NRRL Y-5987, from Boidin, may be a subculture of the type strain. NRRL YB-3884 (CBS 7206) and NRRL YB-3887 (CBS 7207) were isolated by Wickerham from, respectively, the Tuolumne River, Yosemite National Park, California, and a river near Lake Tahoe, California. Type strain: CBS 2286 (NRRL Y-12939), from Drosophila miranda. Comments: On standard tests, P xylosa is phenotypically indistinguishable from P toletana, which led Kregervan Rij (1970c) and subsequent workers to consider the taxa to be conspecific. In a comparison of nDNA relatedness between species o^ Pichia, Kurtzman (1992b) found 30% complementarity between P xylosa and P toletana, thus demonstrating the two taxa to be separate but closely related species. The species can be separated from extent of nDNA relatedness, nucleotide divergence in the 26S rRNA gene, or from differences in electrophoretic patterns of cellular proteins (Kurtzman 1992b). Comments on the genus Since Hansen established the genus Pichia in 1904, the definition of this taxon has changed considerably to accommodate the ever increasing number of new species assigned to it. A historical account of the genus, named in honor of Professor P. Pichi, may be found in the treatments of Lodder and Kreger-van Rij (1952) and Kreger-van Rij (1970c). Many aspects of the earlier taxonomic evolution of Pichia, such as ploidy, the presence or absence of a mating system, the type of conjugation, if any, preceding ascus formation, presence of pellicles and the occurrence of gaseous fermentation, were discussed in detail by Kreger-van Rij (1970c). Electron microscopic and biochemical comparisons have been used to redefine Pichia since preparation of the last two major monographs of this genus (Kregervan Rij 1970c, Kurtzman 1984c,d). Kurtzman and Smiley (1974, 1979) and Kurtzman et al. (1975, 1980b) observed by scanning electron microscopy that, with the exception of P carsonii and P etchellsii, the "round-spored" species of Pichia had roughened surfaces. This prompted the reassignment of those species having Co-Q 7 to Issatchenkia (Kurtzman et al. 1980b), and those species with Co-Q 9 to Debaryomyces (Price and Phaff 1979). P. carsonii and P etchellsii, each with Co-Q 9, remained in Pichia because their ascospores were glabrous, and

42. Pichia E.C. Hansen emend. Kurtzman / C.P. Kurtzman

R ftuxuum (Co-Q 7) was retained in Pichia because its roughened ascospores, unlike species of Issatchenkia, have a subequatorial ring. Nonetheless, use of ascospore morphology as a criterion for the definition of taxa has been uncertain since the demonstration by Wickerham and Burton (1954b) that P. ohmeri forms ascospores that are either hat-shaped or spheroidal, depending on which mating types are paired. As proposed by Stelling-Dekker in 1931, Hansenula and Pichia were separated from each other primarily on the basis of ability to assimilate nitrate as a sole source of nitrogen. This distinction between the genera was further emphasized by Wickerham (1951). The wisdom of separating the genera on only this one point of difference was discussed (Mrak et al. 1942b, Lodder and Kreger-van Rij 1952, Wickerham 1970a), but because nitrate-variable strains had not been detected among species in either genus, both Hansenula and Pichia were maintained. In comparisons of nDNA complementarity between phenotypically similar species of Pichia and Hansenula, Kurtzman (1984a) found 75% relatedness between P. lindneri and H. minuta, thus demonstrating nitrate assimilation to be a species-variable character. This finding prompted the transfer of Hansenula species with hat-shaped ascospores to Pichia, the genus of taxonomic priority. The preceding observation concerning nitrate assimilation is not unique and differences in ability to assimilate nitrate also have been detected between the following pairs that show high nDNA relatedness: Williopsis saturnus var. mrakii (H mrakii) and W. saturnus var. sargentensis (P. sargentensis) (68%, Kurtzman 1991a), strains of P canadensis (95%), Comments on the species, this chapter), and Sterigmatomyces halophilus and its synonym S. indicus (99%, Kurtzman 1990a). In 1977, von Arx et al. reintroduced the genus Williopsis for saturn-spored species that had been assigned to Hansenula (Wickerham 1970a). It was anticipated that the saturn-spored species of Pichia would be placed in Williopsis as well (Kurtzman 1984a), but comparisons of rRNA sequence divergence demonstrated that this group of species was phylogenetically divergent from Williopsis, which prompted their assignment to the newly described genus Saturnispora (Liu and Kurtzman 1991). Billon-Grand (1989) pointed out that species o^ Pichia may be divided into three groups based on the type of coenzyme Q produced (Q-7, Q-8, Q-9), and in view of this, transferred all Q-9 producing species that form hat-shaped ascospores to the newly described genus Yamadazyma. P. carsonii and P etchellsii, which also produce Co-Q 9, were left in Pichia because they form spheroidal ascospores. Yamada et al. (1992b,d) showed from rRNA sequence comparisons that P carsonii and P etchellsii are closely related to species of Debaryomyces and proposed their reassignment to this genus. Kurtzman and Robnett (manuscript in preparation) also compared the rRNA sequences of Co-Q 9-forming yeasts and found species of Debaryomyces and some species of

351

Yamadazyma to be quite closely related. Because of the uncertain circumscription of these two genera and their unresolved relationships with other genera that produce Co-Q 9, the genus Yamadazyma has not been accepted in the present treatment. Yamada et al. (1994c) compared partial rRNA sequences of nitrate-assimilating species of Pichia (species formerly assigned to Hansenula), and argued that nitrate assimilation provided an initial grouping that served as a starting point for further dissection by molecular methods. The study revealed seven groupings, three of which were described as the genera Ogataea, Kuraishia and Nakazawaea. Following this, Yamada et al. (1995a,b) described Komagataella for P pastoris and Kodamaea for P ohmeri. These genera are not accepted in the present treatment because rRNA comparisons that included all species presently assigned to Pichia demonstrated the genus to be comprised of six major clades distributed across the ascomycetous yeast domain, and two of the clades contain closely related nitrate-assimilating and nonassimilating species (Kurtzman and Robnett, manuscript in preparation). Furthermore, there is some overlap with other extant genera that requires resolution. Although each of the 91 species accepted in the present treatment appears genetically isolated from one another as predicted from genetic crosses, nDNA reassociation, and/or rRNA sequence analyses, it is clear from the foregoing discussions that the genus Pichia is polyphyletic, and therefore artificial. Placement of Pichia species into phylogenetically defined genera must await molecular comparisons in which all known ascomycetous yeasts are included. The promise of molecular comparisons to provide a phylogenetic framework to yeast systematics has yet to be realized because sequencing studies are laborious and most comparisons to date have focused on phenotypically defined genera, thus inadvertently overlooking other phylogenetically related taxa. For example, the initial characterization of Debaryomyces resulted in the inclusion of Schwanniomyces (Kurtzman and Robnett 1991). This was followed by the addition of 7? carsonii and P etchellsii to the genus (Yamada et al. 1992b,d), and Wingea was then recognized as a synonym (Kurtzman and Robnett 1994b). In continuation, the relationships of Pichia species having hat-shaped ascospores and Co-Q 9 will need to be examined relative to Debaryomyces. Further problems that will impact presently accepted genera include the close relationships shown by rRNA/rDNA comparisons for P. membranifaciens, Issatchenkia orientalis and Saturnispora dispora (Wilmotte et al. 1993, Kurtzman and Robnett 1994a). Several other methodologies have been used to examine relationships among species assigned to Pichia. The application of numerical analysis, proton magnetic resonance, and serology of cell wall mannans has been discussed previously (Kurtzman and Phaff 1987). The use of cellular long-chain fatty acid profiles for recognizing species has been examined in detail by Muller et al. (1987)

352

Vb. Descriptions of teleomorphic ascomycetous genera and species

and Viljoen et al. (1986a,b, 1988) who reported that it was possible to differentiate between 43 strains representing 33 Pichia species. Groupings of species reported in this work do not correspond well with those derived either from rRNA/rDNA comparisons or from coenzyme Q determinations. However, the broader relationships shown by fatty acid profiles for representatives of the entire yeast clade (Botha and Kock 1993) are reasonably congruent with relationships proposed from rRNA/rDNA analyses (Kurtzman and Robnett 1994a, 1995, unpublished). Shen and Lachance (1993) examined the phylogeny of cactophilic Pichia species from analysis of rDNA restriction maps. Cactus yeasts that form Co-Q 7 were shown to be closely related to one another and to P. membranifaciens, a species common to many habitats. Species not accepted in the genus Species for which no strains were available: Hansenula ellipsoidospora Luteraan (1954) Pichia moniliformis Nishimura (1910) Pichia ovaria Nishimura (1910) Pichia californica (Seifert) Guilliermond (1912)

Pichia megalospora Kuraishi (1958) Pichia orientalis (Beijerinck) Guilliermond (1912) Pichia radaisii (Lutz) Guilliermond (1912) Pichia tamarindorum (Seifert) Guilliermond (1912) Pichia taurica (Seifert) Guilliermond (1912) Pichia (Zygopichia) uvarum Verona & Luchetti (1941) Pichia methanothermo Minami & Yamamura (Minami et al. 1978) Species for which a validly published description was not located: Hansenula misumaiensis Sasaki & Yoshida (1958) nom. nud. Strains [CBS 8062 (NRRL Y-17389), CBS 8063 (NRRL Y-17390)] of this taxon did not form ascospores in the present study, and the species has not been transferred to Pichia. Species represented by a mixed culture: Pichia labacensis Cimerman & Kockova-Kratochvilova (1984). Cultures of this species were reported to be a mixture of P. membranifaciens and Saccharomyces cerevisiae (Barnett et al. 1990).

353

43. Protomyces Unger / C.P. Kurtzman

43. Protomyces Unger C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by budding on a narrow base near the poles of the cell. The cells are ovoidal to elongate, and elongate cells may be asymmetrical. Pseudohyphae and true hyphae are not formed in culture. The ascosporic state is confined to the tissue of infected plants. Heavy walled spheroidal structures, variously termed ascogenous cells, synasci, and 'chlamydospores' appear to be the site of meiosis. Following nuclear division, which may occur after a resting period, 50-200 ellipsoidal ascospores are formed. Ascospore release may be directly through a slit in the ascogenous cell or an ascus-like vesicle containing the ascospores may emerge through a slit in the ascogenous cell. Ascospores form a yeastlike budding stage. Infection of the host seems only to occur by hyphae which result following conjugation of compatible yeast cells. Sugars are not fermented. Nitrate is assimilated by most species. Diazonium blue B reaction is negative. Carotenoid pigments are produced. Formation of extracellular starch-like compounds is strong, weak or variable for some species. Type species Protomyces macrosporus Unger Species examined See Comments on the genus for additional described species. 1. Protomyces gravidus Davis (1907) 2. Protomyces inouyei Hennings (1902) 3. Protomyces inundatus Dangeard (1906) A. Protomyces lactucaedebilis Sawada (1922) 5. Protomyces macrosporus Unger (1833) 6. Protomyces pachydermus von Thiimen (1874) Key to species See Table 36. 1. 2(1). 3(2). 4(3). 5(4).

a b a b a b a b a b

D-Ribose assimilated D-Ribose not assimilated -^ 2 L-Arabinose assimilated L-Arabinose not assimilated -^ 3 D-Glucitol assimilated —^ 4 D-Glucitol not assimilated Salicin assimilated Salicin not assimilated —^ 5 Ascogenous cells germinate without a rest period Ascogenous cells require a rest period before germination

P. lactucaedebilis: p. 355 P. inouyei:

p. 354

P. macrosporus: p. 355 P. gravidus: p. 354 P. inundatus: p. 354 P. pachydermus: p. 356

Table 36 Key characters of species examined in the genus Protomyces Assimilation

Species

Rest period for germination^

D-Ribose

L-Arabinose

D-Glucitol

Salicin

-

+

+

?

+

+

w

7

P. inundatus

-

-

+

+

+

+

P. macrosporus

-

-

-

-

no

P. lactucaedebilis

Protomyces gravidus P. inouyei

P. pachydermus

Ascogenous cells require/do not require a rest period before ascospore formation.

+

7 7

yes

Vb. Descriptions of teleomorphic ascomycetous genera and species

354

Systematic discussion of the species 43.1. Protomyces gravidus Davis (1907) Growtli on 5% malt extract agar: After 3 days at 20^C, the cells are ellipsoidal to elongate, (2.5^.0) x (2.510.0) |im, and may be tapered or curved. The cells occur singly, in pairs, and in small clusters. Growth is butyrous and dark salmon in color. Growtli on the surface of assimilation media: Incomplete pellicles may form on some media. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is butyrous and glistening with a tannish-orange color. Colony margins are finely and irregularly lobed. A faint acidic odor is present. Fermentation: absent. Assimilation (25"C, 28 days): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + s s s -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ s s + s + + s -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Starch formation w Co-Q: Not determined. Mol% G + C: Not determined.

Gelatin liquefaction 0.01% Cycloheximide Growth at 25''C Growth at 37T

-

+

Origin of the strain studied: NRRL Y-17093, from giant ragweed {Ambrosia trifida L.) Arkansas, U.S.A. Representative strain: NRRL Y-17093. 43.2. Protomyces inouyei Hennings (1902) Growth on 5% malt extract agar: After 3 days at 20T, the cells are ellipsoidal to elongate, (2.0^.0) x (2.510.0) |im, and may be tapered, curved or of unusual shapes. The cells occur singly, in pairs, and in small clusters. Growth is butyrous and salmon colored. Growth on the surface of assimilation media: Incomplete pellicles may form on some media.

Dalmau plate culture on morphology agar: After 7 days at 20''C, growth under the coverglass shows neither true hyphae nor pseudohyphae. Aerobic growth is butyrous, glistening and tannish-orange in color. Colony margins are irregularly lobed. A faint acidic odor is present. Fermentation: absent. Assimilation (20"C, 28 days) Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v s s s s s s s s s s s -

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s s w/s s s w s s w/w/v -

Additional assimilation tests and other growth characteristics: Starch formation w 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate 0.01% Cycloheximide n Saccharate Growth at 37°C 10% NaCl/5% glucose Co-Q: 10, IFO 6627 (Yamada et al. 1983). Mol% G + C: 52.0, IFO 6627 {T^ ; Nakase and Komagata 1971g).

Origin of the strains studied: NRRL Y-6347, from L.R.G. Valadon, England; NRRL YB-4354, from K. Tubaki, parasitic on Crepis japonica, Japan. Representative strain: NRRL YB-4354. 43.3. Protomyces inundatus Dangeard (1906) Growth on 5% malt extract agar: After 3 days at 20°C, the cells are ellipsoidal to elongate, (2.0-4.7)x(3.79.0) |im, and may be tapered, curved or of unusual shapes (Fig. 153). The cells occur singly, in pairs, and in small clusters. Growth is butyrous and light salmon colored. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 20''C, growth under the coverglass shows neither true hyphae nor pseudohyphae. Aerobic growth is butyrous, glistening and tannish-orange in color. Colony

355

43. Protomyces linger / C.P. Kurtzman

9.0) |im, and often tapered. The cells occur singly, in pairs, and in small clusters. Growth is butyrous and light salmon colored. Growth on the surface of assimilation media: Pellicles are not formed. ^ ^ Hn

Dalmau plate culture on morphology agar: After 7 days at 20°C, growth under the coverglass shows neither true hyphae nor pseudohyphae. Aerobic growth is butyrous, glistening and tannish-orange in color. Colony margins are irregularly lobed. A faint acidic odor is present. Fermentation: absent.

Fig. 153. P. inundatus, NRRL Y-6802. After 3 days on YM agar at 15''C. Bar = 5 jim.

margins are irregularly lobed. A faint acidic odor is present. Fermentation: absent. Assimilation (20"C, 28 days): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + s -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi-ee

w/+/w +/w

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: Not determined.

Starch formation Gelatin liquefaction 0.01% Cycloheximide Growth at 25''C

w/-

Origin of the strains studied: NRRL Y-6349, NRRL Y-6802, NRRL Y-6803, from L.R.G. Valadon, England, parasitic on Apium nodiflorum. Complementary mating types: NRRL Y-6802 and NRRL Y-6803. Representative strain: NRRL Y-6349. 43.4. Protomyces lactucaedebilis Sawada (1922) Growth on 5% malt extract agar: After 3 days at 20T, the cells are ellipsoidal to elongate, (2.5-5.0)x(3.5-

Assimilation (15"C, 50 days): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: 10, IFO 6899 (Yamada et al. MoI% G + C: 52.0, IFO 6899 {T^ :

Starch formation Gelatin liquefaction 0.01% Cycloheximide Growth at 25''C

w/w +

1983). Nakase and Komagata 1971g).

Origin of the strain studied: NRRL YB-4353, received from K. Tubaki, Japan. Representative strain: NRRL YB-4353. 43.5. Protomyces macrosporus Unger (1833) Grow^th on 5% malt extract agar: After 3 days at 20°C, the cells are ellipsoidal to elongate, (2.5^.0)x(3.07.0) |im, and often tapered. The cells occur singly, in pairs, and in small clusters. Growth is butyrous and light salmon colored. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 20°C, growth under the coverglass is devoid of either true hyphae or pseudohyphae. Aerobic growth is

356

Vb. Descriptions of teleomorphic ascomycetous genera and species

butyrous, glistening and tannish-orange in color. Colony margins are irregularly lobed. A faint acidic odor is present. Fermentation: absent.

Assimilation (20"C, 28 days): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ +

-

+

-

+ + + + +

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Starch formation w Co-Q: Not determined. Mol% G + C: Not determined.

Gelatin liquefaction 0.01% Cycloheximide Growth at lO^'C Growth at 25''C

-

+

-

+

-

+ +

-

+

-

growth + n

Origin of the strain studied: NRRL Y-12879, from a leaf gall of hedge parsley [Torilis japonica (Houtt) D C ] , Arkansas, U.S.A. Representative strain: NRPIL Y-12879. 43.6. Protomyces pachydermus von Thiimen (1874) Growth on 5% malt extract agar: After 3 days at 20°C, the cells are ellipsoidal to elongate, (2.5^.0)x(3.08.2) [im, and frequently tapered. The cells occur singly, in pairs, and in small clusters. Growth is butyrous and light salmon colored. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: After 7 days at 15^*0, growth under the coverglass has neither true hyphae nor pseudohyphae. Aerobic growth is butyrous, glistening and tannish-orange in color. Colony margins are irregularly lobed. A faint acidic odor is present. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v + + v + + + + w/V v -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol + Erythritol Ribitol V Galactitol v D-Mannitol + D-Glucitol + a-Methyl-D-glucoside v Salicin D-Gluconate DL-Lactate w/Succinate w/Citrate w Inositol Hexadecane Nitrate v Vitamin-free -

Additional assimilation tests and other characteristics:

growth

Gelatin liquefaction w 2-Keto-D-gluconate 0.01% Cycloheximide 5-Keto-D-gluconate Growth at 20T + Saccharate Growth at 2 5 ^ 10% NaCl/5% glucose Starch formation + Co-Q: 10, IFO 6628 (Yamada et al. 1983). Mol% G + C: 52.4, IFO 6628 {T^\ Nakase and Komagata 1971g).

Origin of the strains studied: NRRL YB-4355, from K. Tubaki, Japan; NRRL Y-6348, from L.R.G. Valadon, England. Representative strain: NRRL YB-4355. Comments on the genus Species of the genus Protomyces are plant pathogens causing tissue distortion similar to that produced by Taphrina spp. Members of both genera show budding, yeastlike growth on laboratory media but do not develop hyphae or sexual states unless infecting their host plants (Tubaki 1957, Valadon et al. 1962, von Arx et al. 1982). Recently, species of Protomyces became of interest as weed biocontrol organisms (Valverde and Templeton 1984, Cartwright and Templeton 1988). Species of Protomyces generally have a reddish, salmon-like color in culture whereas Taphrina species often show lighter shades of red, lavender or yellow. The colors arise from the presence of carotenoids. Van Eijk and Roeymans (1982) compared the carotenoid content of representative species oi Protomyces and Taphrina, and concluded that the two genera cannot be reliably separated from quantitative differences in carotenoid content. The placement of Protomyces among the fungi has been problematical, and Reddy and Kramer (1975) have reviewed earlier ideas on relationships noting that more recent workers have suggested that Protomyces is a primitive ascomycete. Molecular comparisons have brought a more definitive perspective to the phylogenetic

43. Protomyces Unger / C.P. Kurtzman

placement of Protomyces. Walker (1985a) analyzed 5S rRNA sequences and placed Protomyces near Schizosaccharomyces rather than with either the budding yeasts or the euascomycetes. Kurtzman (1993c) confirmed this placement fi-om analysis of partial 18S and 26S rRNA sequences and noted that Taphrina and Protomyces are closely related. Nishida and Sugiyama (1994) proposed from comparisons of IBS rDNA gene sequences that Protomyces, Taphrina, Saitoella, Schizosaccharomyces and Pneumocystis represent a major lineage within the Ascomycota that is basal to the budding yeasts and euascomycetes, and suggested the name Archiascomycetes for this group. Reddy and Kramer (1975) placed the genera Burenia, Protomyces, Protomycopsis, Taphridium and Volkaria in the Protomycetaceae, the only family of the Protomycetales, but questioned whether the genus Mixia was

357

a member of this family. Since then, Nishida et al. (1995) showed from 18S rDNA comparisons that Mixia osmundae is actually a basidiomycete. Species of Protomyces are primarily defined from morphology and host range. Reddy and Kramer (1975) accepted 10 species and listed 61 other described species as doubtfial or unavailable for study. These authors also transferred P inundatus to the genus Burenia. The present treatment of Protomyces is not intended to be definitive, nor is it certain that the six species described are biologically distinct from one another. The six taxa listed are available from culture collections and serve to illustrate the cultural characteristics of some better known members of the genus. Genetic and molecular comparisons will be needed to understand species boundaries, and for this reason no synonyms are given with the species listed.

358

Vb. Descriptions of teleomorphic ascomycetous genera and species

44. Saccharomyces Meyen ex Reess Ann Vaughan-Martini and Alessandro Martini Diagnosis of the genus (Yarrow 1984a) Vegetative reproduction is by multilateral budding. Cells are globose, ellipsoidal or cylindroidal. Pseudohyphae may be formed but not septate hyphae. The vegetative phase is predominantly diploid (or of higher ploidy), conjugation occurs on or soon after germination of the ascospores; diploid ascospores may be formed. Ascospores are globose to short ellipsoidal, with a smooth wall and usually one to four per ascus. Asci are persistent. Vigorous fermentation of sugars. Starch-like compounds are not produced. Absence of growth with nitrate as a sole source of nitrogen. Diazonium blue B reaction is negative. Type species Saccharomyces cerevisiae Meyen ex Hansen Species accepted 1. Saccharomyces barnettii Vaughan-Martini (1995) 2. Saccharomyces bayanus Saccardo (1895) 3. Saccharomyces castellii Capriotti (1966) 4. Saccharomyces cerevisiae Meyen ex E.G. Hansen (1883) 5. Saccharomyces dairenensis Naganishi (1917) 6. Saccharomyces exiguus Reess ex E.G. Hansen (1888) 7. Saccharomyces kluyveri Phaff, M.W. Miller & Shifrine (1956) 8. Saccharomyces paradoxus Bachinskaya (1914) 9. Saccharomyces pastorianus E.G. Hansen (1904) 10. Saccharomyces rosinii Vaughan-Martini, Barcaccia & Pollacci (1996) 11. Saccharomyces servazzii Gapriotti (1967) 12. Saccharomyces spencerorum Vaughan-Martini (1995) 13. Saccharomyces transvaalensis van der Walt (1956) 14. Saccharomyces unisporus Jorgensen (1909) Key to species See Table 37. 1.

a b 2(1). a b 3(1). a b 4(3). a b 5(4). a b 6(3). a b 7(6). a b 8(7). a b 9(8). a b 10(6). a b 11(10). a b

Maximum growth temperature above SO^C —^ 3 Growth absent above 30°C -^ 2 Sucrose, raffinose and trehalose fermented Sucrose, raffinose and trehalose not fermented EthylamineHCl assimilated -^ 4 EthylamineHCl not assimilated —> 6 Growth in the presence of 1000 ppm cycloheximide Absence of growth in the presence of 1000 ppm cycloheximide —> 5 Maltose, raffinose and ethanol assimilated Maltose, raffinose and ethanol not assimilated Maltose assimilated -^ 1 Maltose not assimilated -^ 10 Growth in vitamin-free medium Absence of growth in vitamin-free medium —» 8 D-Mannitol assimilated; maximum growth temperature 37°C or greater D-Mannitol not assimilated; maximum growth temperature less than 37''C or variable at 37''C -^ 9 Active transport mechanism for fructose present; maximum growth temperature 34''C or below Active transport mechanism for fructose not present; maximum growth temperature variable Sucrose, raffinose and trehalose fermented Sucrose, raffinose and trehalose not fermented -^ 11 Growth in the presence of lOOOppm cycloheximide Absence of growth in the presence of 1000 ppm cycloheximide -^ 12

S. barnettii: S. rosinii:

p. 359 p. 367

S. unisporus:

p. 370

S. kluyveri: p. 365 S. spencerorum: p. 368

S. bayanus:

p. 360

S. paradoxus:

p. 366

S. pastorianus: p. 367 S. cerevisiae: p. 361 S. exiguus: p. 364 S. servazzii:

p. 368

359

44. Saccharomyces Meyen ex Reess /A. Vaughan-Martini and A. Martini 12(11). a D-Ribose normally assimilated; 8-10 chromosomes 600 - ^ 3000 kilobases S. castellii: b D-Ribose not assimilated, mostly single, highly refringent ascospores on acetate agar; 8 chromosomes 400 -^ 2200 kilobases S. transvaalensis: c D-Ribose normally not assimilated; 7-9 chromosomes 750 -^ 3000 kilobases S. dairenensis:

p. 360 p. 369 p. 363

Table 37 Key characters of species of the genus Saccharomyces Species

Fermentation^ Su

Saccharomyces

Raf

+

Assimilation^

Tr

+

Su

Ma

+

-

s

Carbon source Raf DRi Eth +

Growth^ N source Cychx 3 0 T 2>TC VitCad Ety Lys 1000 free

DM

-

Frc''

-

-

-

-

-

-

-

-

-

n

barnettii S. bayanus

+

S. castellii

_

+

S. cereuisiae

+

+

-

S. dairenensis

_

_

_

_

_

s

+

+

_

_

+ _

+

+

_

-

+

+/v

_

-

+

+

_

_

v

V

-

_

_

-

v

-

-

-

-

+

v

-

n

+

V

-

+

+

+

-

+

-

+

-

+

-

+

+

+

-

+

+

+

+

+

-

+

+

-

S. paradoxus

+

+

-

+

+

+

-

+

+

-

-

-

-

+

+

-

S. pastorianus

V

+

-

+

+

+

-

+

-

-

+

-

_ -

S. spencerorum

+

S. transvaalensis

_

_

S. unisporus

-

-

_ _

_ _

+

_

_ -

_ -

_

_ -

_ -

_

_

-

_ -

_ _

+

_ -

_ _

_ -

_

_

_

v +

_ -

+ v

-

_

_

-

-

_ |

+ -

_

. +

v

+

-

-

+

+

_ +

+

-

-

+

_

v

v

+

_

-

+

S. kluyveri

S. servazzii

-

-

+

+

S. exiguus

S. rosinii

-

-

_

-

-

-

_

-

-

s

-

_

n

-

n n -

-

+

_

_

n

_

_

n

+

+

-

n

+

+

-

n

+

v

-

n

^ Abbreviations: Su, sucrose; Raf, raffinose; Tr, trehalose; Ma, maltose; D-Ri, D-ribose; Eth, ethanol; D M , D-mannitol; Cad, cadaverine-2HCl; Ety, ethylamine-HCl; Lys, L-lysine; Cychx 1000, indicates resistance to lOOOppm cycloheximide in the medium; Vit-free, growth in vitamin-free medium. ^ Presence of a fructose transport system; n, not determined.

Systematic discussion of the species

Assimilation: Glucose

44.1. Saccharomyces barnettii Vaughan-Martini

+

Galactose

(1995)

A'^-Acetyl-D-glucosamine

+

Methanol Ethanol

-

L-Sorbose

-

f,^"';'"

^

Maltose

-

Erythritol

the cells are globose, ovoidal or elongate, (2.2-6.0)x(3.510.5) [xm, and are usually isolated, or in pairs. After one month at 20°C, a sediment is present.

cellobiose Trehalose Lactose

+ -

Ribitol Galactitol o-Mannitol

Growth on 5% malt agar: After one month at 20°C, the streak culture is butyrous and light cream-colored. The surface is smooth, usually flat, occasionally raised or

Melibiose

-

D-Glucitol

Raffinose Melezitose inulin

+ -

a-Methyi-o-giucoside Salicin D-Gluconate

+

folded and opaque.

Growth on the surface of assimilation media: Pellicles are not formed.

Soluble starch D-Xylose

-

DL-Lactate Succinate

+ +

L-Arabinose o-Arabinose

-

Citrate inositol

Dalmau plate culture on morphology agar: Pseudo-

D-Ribose

-

Hexadecane

L-Rhamnose

-

Nitrate

D-Glucosamine

-

Vitamin-free

Growth in 5% malt extract: After 3 days at 25°C, -^

hyphae are not present.

Formation of ascospores: Vegetative cells are transr, 1 1 . 1 . . . . . formed directly into persistent asci containing one or two,

rarely four, globose to short ellipsoidal ascospores.

-

-

-

^ ,,.,. , . ., . . . . i ., Additional assimilation tests and other growth , . . ^. characteristics* Cadaverine-HCl

Ascospores were observed on acetate agar usually after

f^T^'K

L-Lysine

'

-

lOOppm Cycloheximide

-

Growth at ?>TC

20-40 days at 25''C.

Ethylamine-HCl

FermentationGlucose *

+

Lactose

-

^^'^' ^^^ determined. Mol«/o G + C: 33.4, CBS 6946 ( 7 ^ : Yarrow 1978).

Galactose

+

Raffinose

s

Sucrose Maltose

+ -

Trehalose Melibiose

s -

-

Origin of the Strains studied: DBVPG 6365 (CBS 5648), sauerkraut; DBVPG 6370 (CBS 6946), soft drink.

Vb. Descriptions of teleomorphic ascomycetous genera and species

360

Type strain: CBS 5648 (DBVPG 6365) isolated from sauerkraut. Comments: Strains of this species require biotin for growth (Yarrow, personal communication). For additional comments see the general discussion under S. exiguus. 44.2. Saccharomyces bayanus Saccardo (1895) Synonyms: Saccharomyces Saccharomyces Saccharomyces Saccharomyces (1924a) Saccharomyces Saccharomyces Saccharomyces

uuarum Beijerinck (1898b) globosus Osterwalder (1924a) heterogenicus Osterwalder (1924a) intermedius E.C. Hansen var. valdensis Osterwalder tubiformis Osterwalder (1924a) inusitatus van der Walt (1965b) abuliensis Santa Maria (1978)

Growth in 5% malt extract: After 3 days at 25^C, the cells are globose, ovoidal or elongate, (2.2-6.0)x(3.510.5) ^m, and are usually isolated, but can be in groups of 3-20 cells (Fig. 154). After one month at 20T, a sediment is present.

Fig. 154. S bayanus, CBS 380. Vegetative cells after 2 days, on YEPG agar at 25°C. Bar= 10 [im.

Growth on 5% malt agar: After one month at 20*'C, the streak culture is butyrous and light cream-colored. The surface is smooth, usually flat, occasionally raised or folded and opaque. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 5 days at 25''C, well-developed pseudohyphae are usually present. Formation of ascospores: Vegetative cells are transformed directly into persistent asci containing one to four globose to short ellipsoidal ascospores. Ascospores were observed only on acetate agar. After 14 days at 25°C, sporulation is usually below 10% and ascospores are rarely viable. Fermentation: Glucose Galactose Sucrose Maltose

+ V

+ +

Lactose Raffinose Trehalose Melibiose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

-

+ +

-

s

V

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

V

V

V

V V + Additional assimilation tests and other growth characteristics: V

lOOppm Cycloheximide CadaverineHCl Active fructose transport + L-Lysine Growth at 2>TC EthylamineHCl Co-Q: 6 (Yamada et al. 1976b). Mol% G + C: 37-40, NRRL Y-409, NRRL Y-969 {T^\ Bicknell and Douglas 1970); 38.8^0.5, AJ 4068, AJ 5274, AJ 5308, AJ 5309, AJ 5351, AJ 5357 {T^: Nakase and Komagata 1971e); 41.6^2.1, CBS 380, CBS 395, CBS 1546 (BD: Vaughan-Martini and Kurtzman 1985); 37.8^1.5, CBS 380, CBS 395, CBS 431 (7;^: Vaughan-Martini, unpublished data).

Origin of the strains studied: DBVPG 6032 (CBS 378), unknown; DBVPG 6131 (CBS 431), type strain of S. tubiformis, fermenting pear juice; DBVPG 6171 (CBS 380), beer; DBVPG 6179 (CBS 395), type strain of S. uuarum, berries; DBVPG 6253 (CBS 1546), type strain ofS. inusitatus, beer; DBVPG 6259 (CBS 1604), perry; DBVPG 6260 (CBS 1505), type strain of S. intermedius var. valdensis, grape must; DBVPG 6347 (NCYC 374), unknown. Type strain: CBS 380 (DBVPG 6171, IFO 1127, NRRL Y-12624), isolated from beer, received by CBS from the Central Laboratory of the South Manchuria Railway Company. 44.3. Saccharomyces castellii Capriotti (1966) Growth in 5% malt extract: After 3 days at 25T, the cells are globose, ovoidal or elongate, (3.0-5.5)x(3.57.0) |im, single or in pairs. After one month at 20''C, a sediment is present. Growth on 5% malt agar: After one month at 20°C, the streak culture is butyrous and light cream-colored. The surface is smooth and glossy and the margin is entire or crenate. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: Pseudohyphae are not formed.

44. Saccharomyces Meyen ex Reess /A. Vaughan-Martini and A. Martini

Formation of ascospores: Vegetative cells are transformed directly into persistent asci containing one or two, rarely four, globose ascospores. Sporulation was observed on acetate agar and YM agar in some strains after 7-9 days at 25°C. Fermentation:

361

44.4. Saccharomyces cerevisiae Meyen ex E.G. Hansen (1883)

Saccharomyces cerevisiae Meyen ex E.C. Hansen var. ellipsoideus (E.C. Hansen) Dekker (Stelling-Dekker 1931) Saccharomyces ilicis Gronlund (1892) Saccharomyces vini-muntz Kayser (1892) Saccharomyces vordermanii Went & Prinsen Geerligs (1894) Saccharomyces willianus Saccardo (1895) Saccharomyces sake Yabe (1897) Saccharomyces cratericus Lindner (1898a) Saccharomyces cerevisiae Meyen ex E.C. Hansen var. cratericus (Lindner) Lodder (1932) Saccharomyces awamori Inui (1901) Saccharomyces cerevisiae agavica sylvestre Carbajal (1901) Saccharomyces intermedius E.C. Hansen (1904) Saccharomyces turbidans E.C. Hansen (1904) Saccharomyces cerevisiae Meyen ex E.C. Hansen var. turbidans (E.C. Hansen) Dekker (Stelling-Dekker 1931) Saccharomyces validus E.C. Hansen (1904) Saccharomyces brasiliensis Lindner (1905b) Saccharomyces thermantitonum Johnson (1905) Saccharomyces batatae Saito (1907) Saccharomyces logos van Laer & Denamur ex Jorgensen (1909) Saccharomyces multisporus Jorgensen (1909) Saccharomyces tokyo Nakazawa (1909) Saccharomyces yedo Nakazawa (1909) Saccharomyces coreanus Saito (1910) Saccharomyces shaoshing Takahashi (1911) Saccharomyces anamensis Will & Heinrich (Will 1913) Saccharomyces chevalieri Guilliermond (1914) Saccharomyces lindneri Guilliermond (1914) Saccharomyces chevalieri Guilliermond var. lindneri (Guilliermond) Dekker (Stelling-Dekker 1931) Saccharomyces mandshuricus Saito (1914) Saccharomyces mangini Guilliermond (1914) Saccharomyces marchalianus Kufferath (1920) Saccharomyces cerevisiae Meyen ex E.C. Hansen var. marchalianus (Kufferath) Dekker (Stelling-Dekker 1931) Saccharomyces cerasi Schweizer (1921) Saccharomyces odessa Schnegg & Oehlkers (1922) Saccharomyces chodati Steiner (1924) [non Saccharomyces chodati Schweizer (1921)] Saccharomyces oviformis Osterwalder (1924a) Saccharomyces valesiacus Osterwalder (1924a) Saccharomyces annulatus Negroni (1929) Saccharomyces festinans Ward & Baker (1929) Saccharomyces cerevisiae Meyen ex E.C. Hansen var. festinans (Ward & Baker) Dekker (Stelling-Dekker 1931) Saccharomyces eryobotryae Suminoe & Miwa (1930) Saccharomyces carlsbergensis E.C. Hansen var. mandshuricus (Saito) Dekker (Stelling-Dekker 1931) Saccharomyces carlsbergensis E.C. Hansen var. monacensis (E.C. Hansen) Dekker (Stelling-Dekker 1931) Saccharomyces carlsbergensis E.C. Hansen var. polymorphus Dekker (Stelling-Dekker 1931) Saccharomyces carlsbergensis E.C. Hansen var. valdensis (Osterwalder) Dekker (Stelling-Dekker 1931) Saccharomyces cerevisiae Meyen ex E.C. Hansen var. pulmonalis (Redaelli) Dekker (Stelling-Dekker 1931) Saccharomyces elongatus Krumbholz (1932) Saccharomyces cheresiensis Prostoserdov & Afrikian (1933) Saccharomyces oviformis Osterwalder var. cheresiensis (Prostoserdov & Afrikian) Kudryavtsev (1954) Saccharomyces formosensis Nakazawa (1933) Saccharomyces mangini Guilliermond var. casei Sacchetti (1933) Saccharomyces cerevisiae Meyen ex E.C. Hansen var. onychophilus

Anamorph: Candida robusta Diddens & Lodder Synonyms: Saccharomyces ellipsoideus Meyen ex E.C. Hansen (1883)

Zach (Wolfram and Zach 1934b) Saccharomyces intermedius E.C. Hansen var. turicensis Osterwalder (1934)

Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose Melibiose

+ + s v -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: CadaverineHCl L-Lysine EthylamineHCl Co-Q: Not determined. Mol% G + C: 38.8, CBS 4309 {T^ 39.1, CBS 4309, CBS 4310 (BD: 1988).

lOOppm Cycloheximide Growth at 37°C

Yarrow and Nakase 1975); 36.7Vaughan-Martini and Kurtzman

Origin of the strains studied: DBVPG 6298 (CBS 4309), type strain of 5. castellii, soil; DBVPG 6352 (CBS 3007), DBVPG 6353 (CBS 2913), and DBVPG 6356 (CBS 3006), fermenting cucumber brine; DBVPG 6361 (CBS 4310), soil; DBVPG 6410 (CBS 1579), buttermilk; DBVPG 6751 (CBS 7188), ensiled maize; DBVPG 6758 (CBS 2248), soil; DBVPG 6759 (CBS 4906), caecal contents of a baboon. Type strain: CBS 4309 (DBVPG 6298, IFO 1992, NRRL Y-12 630) isolated by Capriotti from Finnish soil. Comments: Spectrophotometric DNA reassociation studies (Vaughan-Martini and Kurtzman 1988) revealed that the nucleotide sequences of S. dairenensis and S. castellii were not homologous, therefore indicating the presence of two separate taxa despite essentially identical physiological responses.

362

Vb. Descriptions of teleomorphic ascomycetous genera and species

Saccharomyces ellipsoideus E.C. Hansen var. umbra Castelli (1935) nom. nud. Saccharomyces praecisus Nakazawa & Simo (1936) Saccharomyces robustus Nakazawa & Simo (1936) Saccharomyces carbajali Ruiz (1938) Saccharomyces ellipsoideus E.C. Hansen var. major Castelli (1938) nom. nud. Saccharomyces italicus Castelli (1938) nom. nud. Saccharomyces ouiformis Osterwalder var. bisporus Castelli (1938) nom. nud. Saccharomyces mangini Guilliermond var. miso Mogi (1942) Candida robusta Diddens & Lodder (1942) Mycotorula robusta (Diddens & Lodder) Krasil'nikov (1954c) Saccharomyces joannae von Szilvinyi & Kaulich (1948) Saccharomyces fructuum Lodder & Kreger-van Rij (1952) Saccharomyces hutensis KufFerath ex Dekker (Lodder and Kregervan Rij 1952) Saccharomyces cerevisiae Meyen ex E.C. Hansen vai. fructuum (Lodder & Kreger-van Rij) Jensen (1967) Saccharomyces steineri Lodder & Kreger-van Rij (1952) Saccharomyces capensis van der Walt & Tscheuschner (1956d) Saccharomyces italicus Castelli var. melibiosi van Uden & Assis-Lopes (1957) Saccharomyces oleaceus Santa Maria (1958a) Saccharomyces oleaginosus Santa Maria (1958a) Saccharomyces aceti Santa Maria (1959a) Saccharomyces oxidans Santa Maria (1959a) Saccharomyces carlsbergensis Hansen var. alcoholophila Shehata (1960) Saccharomyces prostoserdovii Kudryavtsev (1960) Saccharomyces uvarum Beijerinck var. carlsbergensis Kudryavtsev (1960) Saccharomyces uvarum Beijerinck var. melibiosus Kudryavtsev (1960) Saccharomyces uini Meyen ex Kudryavtsev (1960) Saccharomyces uini Meyen ex Kudryavtsev var. cartilaginosus Kudryavtsev (1960) Saccharomyces cartilaginosus Lindner var. italiens Sacchetti (1932a) Saccharomyces uini Meyen ex Kudryavtsev var, cerevisiae Kudryavtsev (1960) Saccharomyces hienipiensis Santa Maria (1962) Saccharomyces norbensis Santa Maria (1963a) Saccharomyces onubensis Santa Maria (1964) Saccharomyces diastaticus Andrews & Gilliland ex van der Walt (1965a) Saccharomyces hispanica Santa Maria (1968) Saccharomyces beticus Marcilla ex Santa Maria (1970) Saccharomyces cartilaginosus Lindner var. cartilaginosus Lodder (1970) Saccharomyces cordubensis Santa Maria (1970) Saccharomyces gaditensis Santa Maria (1970) Saccharomyces peka Takeda (Lodder 1970) Saccharomyces acidosaccharophillii Kawano, Kojima, Ohosawa & Morinaga (1976) Saccharomyces abuliensis Santa Maria (1978) Saccharomyces hispalensis Santa Maria (1978) Saccharomyces cerevisiae Meyen ex E.C. Hansen var. pelliculosa S. Goto (Bamett et al. 1983) Saccharomyces boulardii Surawicz, Elmer, Speelman, McFarland, Chinn & van Beele (1989) nom. nud.

Growth in 5% malt extract: After 3 days at 25°C, the cells are globose, ovoidal or elongate, (3.0-8.0)x(5.010.0) [xm, and are usually isolated or in small groups (Fig. 155). After one month at 20''C, a sediment is present.

Fig. 155. S. cerevisiae, CBS 1171. Vegetative cells after 2 days, on YEPG agar, 25°C. Bar=10^im.

Growth on 5% malt agar: After one month at 20°C, growth is butyrous and light cream-colored. The surface is smooth, usually flat, occasionally raised or folded and opaque. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: Pseudohyphae are either not formed or are rudimentary. Formation of ascospores: Vegetative cells are transformed directly into persistent asci containing one to four globose to short ellipsoidal ascospores (Fig. 156). Ascospore formation, observed almost exclusively on acetate agar, was usually below 10% except in highly fertile homothallic strains where sporulation ranged from 40-95% in 6-10 days at 20"C. Fermentation: Glucose Galactose Sucrose Maltose

+ V

+ V

Lactose Raffinose Trehalose Melibiose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

-

+ +

-

+

V

+ V

-

+

-

V

+

V

V V V

-

Additional assimilation tests and other gro^ characteristics: CadaverineHCl lOOppm Cycloheximide L-Lysine Active fructose transport EthylamineHCl Growth at ?>TC V -

363

44. Saccharomyces Meyen ex Reess /A. Vaughan-Martini and A. Martini Co-Q: 6 (Yamada et al. 1976b). Mol% G + C: 3 9 ^ 1 , NRRL Y-123, NRRL Y-379, NRRL Y-1345, NRRL Y-1356, NRRL Y-1373, {T^\ Bicknell and Douglas 1970); 38.540.7, 30 strains {T^\ Nakase and Komagata 1971e); 39.0^0.2, CBS 1395, CBS 2247, CBS 3081, CBS 3093, CBS 4903, CBS 5155, CBS 5835 {T^\ Yarrow and Nakase 1975); 39.9, UCD-FST 74-83 (BD: Price et al. 1978); 40.1-41.1, CBS 400, CBS 459, CBS 1171, CBS 1636, CBS 4054, NRRL Y-11846 (BD: Vaughan-Martini and Kurtzman 1985).

Origin of the strains studied: DBVPG 1357, DBVPG 1360, DBVPG 1361, DBVPG 1772, DBVPG 1776, DBVPG 1789 and DBVPG 1793, vineyard soil; DBVPG 1948 and DBVPG 1950, cavern soil; DBVPG 6029 (CBS 1907), type strain of C robusta, DBVPG 6037 (CBS 2980), Dwsophila; DBVPG 6039 (CBS 1395), type strain of S. ellipsoideus, DBVPG 6042 (CBS 403), type strain of S. lindneri, ginger beer; DBVPG 6043 (CBS 382), type strain of S. logos, brewery; DBVPG 6046 (CBS 422), type strain of S. odessa, beer; DBVPG 6048 (CBS 423), type strain of S. steineri, wine; DBVPG 6173 (CBS 1171), beer; DBVPG 6220 (CBS 6503), brewery killer; DBVPG 6248 (CBS 2354) (NCYC 74) used for assay of pyridoxine and pantothenic acid; DBVPG 6249 (CBS 2444), distillery; DBVPG 6250 (CBS 4734), sugar cane; DBVPG 6251 (CBS 1250) type strain of S. cheresiensis, sherry; DBVPG 6254 (CBS 429) type strain of S. ouiformis, grape must.

alcoholic fermentation of fruit juices. The traditional epithets such as S. ellipsoideus, S. ouiformis, S. cheresiensis or S. cheualieri, retained over the years as the main species in this process, have been shown to be strains of S. cereuisiae with particular technological capabilities. In addition, other members of the sensu stricto complex: S. bayanus, S. paradoxus, and S. pastorianus {sensu Vaughan-Martini and Martini 1987a, Vaughan-Martini 1989), while at times found in these man-created environments, do not appear to be the most capable starters for the process. Since the discovery that some strains of S. cereuisiae are capable of producing a "killer" toxin lethal to other members of the same species (Bevan and Makover 1963), many investigations have been carried out on the mode of action and the chemical and physical properties of the toxin as well as the biology of the "killer" plasmid. It has been asserted that this phenomenon can be technologically useful, and numerous studies have been tested in this regard. On the other hand, it is not possible to apply this character in yeast classification since studies have shown that this is a strain- rather than species-related character (Vaughan-Martini and Rosini 1989). The nomen nudum S. boulardii, cited in recent years as an anti-diarrhea agent (Surawicz et al. 1989), is homologous with S. cereuisiae for 95% of its genome (Vaughan-Martini, unpublished data). 44.5. Saccharomyces dairenensis^ Naganishi (1917) Growth in 5% malt extract: After 3 days at 25°C, the cells are globose, ovoidal or elongate, (3.0-5.5)x(3.57.0) [im, single or in pairs. After one month at 20°C, a sediment is present. Growth on 5% malt agar: After one month at 2 0 T , the streak culture is butyrous and light cream-colored. The surface is smooth and glossy and the margin is entire or crenate.

Fig. 156. S. cereuisiae, CBS 403. Unconjugated asci with ascospores after 7 days on McClary's acetate agar, 25°C. Bar= lO^xm.

Complementary mating types: CBS 1782.1 and CBS 1782.2 or CBS 2354.1 and CBS 2354.2. Type strain: CBS 1171 (ATCC 18824, DBVPG 6173, NCYC 505, NRRL Y-12632), isolated by van Wijk from the top yeast used in the Oranjeboom Brewery at Rotterdam, and designated as the type strain by Lodder and Kreger-van Rij (1952). Comments: A large number of ecological and technological investigations have set forth the hypothesis that S. cereuisiae is the principal species responsible for the

Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: pseudohyphae are formed.

No

Formation of ascospores: Vegetative cells are transformed directly into persistent asci containing one or two, rarely four, globose ascospores. Sporulation was observed on acetate agar and YM agar in some strains after 7-9 days at 25'^C.

Fermentation:

Glucose Galactose Sucrose Maltose

The original spelling of the species epithet dairensis has been treated as an orthographic error.

+ +

-

Lactose Rajfifinose Trehalose Melibiose

Vb. Descriptions of teleomorphic ascomycetous genera and species

364

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+

V

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: CadaverineHCl lOOppm Cycloheximide L-Lysine Growth at 2>TC v EthylamineHCl Co-Q: Not determined. MoI% G + C: 37, NRRL Y-1353 {T^\ Bicknell and Douglas 1970); 35.9-38.5, 8 strains {T^: von Arx 1977b, 1978); 36.7, CBS 421 (BD: Vaughan-Martini and Kurtzman 1988).

Origin of the strains studied: DBVPG 6357 (CBS 6904), soil; DBVPG 6359 (CBS 6463), fermenting grapes; DBVPG 6366 (CBS 421), dry fruit of a persimmon; DBVPG 6752 (CBS 6334), fermenting mushroom. Type strain: CBS 421 (ATCC 10597, DBVPG 6366, IFO 1168, NRRL Y-1353) isolated by Naganishi.

Candida holmii (Jorgensen) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) 1 Torula alactosa Harrison (1928)

Growth in 5% malt extract: After 3 days at 25°C, the cells are subglobose to ellipsoidal, elongate, (2.55.0)X(3.5-6.5) |im, single or in pairs. After one month at 20°C, a sediment is present and occasionally a ring. Growth on SVo malt agar: After one month at 20''C, the streak culture is butyrous, cream-colored to tan, smooth with light striations, flat and rather spreading, glossy, margin usually entire. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: Pseudohyphae are not formed. Formation of ascospores: Vegetative cells are transformed directly into asci containing one to two, rarely four, globose to ellipsoidal ascospores. Sporulation was observed on acetate agar and V8 agar after 7-10 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

+ + +

-

Lactose Raffinose Trehalose Melibiose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

s +

s

-

Comments: DNA/DNA reassociation (Vaughan-Martini and Barcaccia 1996) has shown that many strains previ+ ously classified as S. dairenensis are homologous to the type strain of the species S. castellii with which they must now be considered synonymous. The same study demonstrated that none of the strains examined shared s V significant DNA base sequences with the type strain of S. dairenensis. Nevertheless, due to the limited response of strains of this group to the tests of conventional taxonomy, it is not possible at the present time to establish a clear distinction between all but one of these separate Additional assimilation tests and other growth species. As a consequence, until satisfactory criteria are characteristics: determined for their separation, these species will have to lOOppm Cycloheximide v CadaverineHCl be considered under the S. dairenensis complex. One pair L-Lysine lOOOppm Cycloheximide v of homologous strains, which can be distinguished by a EthylamineHCl Growth at ?>TC few simple tests, has been designated as the new species Co-Q: 6 (Yamada et al. 1976b). MoI% G + C: 30.5, AJ 4075 {T^\ Nakase and Komagata 1968a); 33.2S. rosinii (Vaughan-Martini et al. 1996). 44.6. Saccharomyces exiguus Reess ex E.G. Hansen (1888a)

33.7, AJ 4075, AJ 4349 (7;„: Nakase and Komagata 1971e); 35.2, CBS 379 {T^\ Yarrow and Nakase 1975); 32.9-34.9, 10 strains {T^\ Yarrow 1984a); 34.7-36.3, CBS 134, CBS 135, CBS 397, CBS 2141 (BD: Vaughan-Martini and Kurtzman 1988).

Anamorph: Candida holmii (Jorgensen) S.A. Meyer & Yarrow Synonyms: Torula holmii Jorgensen (1909) Torulopsis holmii (Jorgensen) Lodder (1934) Cryptococcus holmii (Jorgensen) Skinner (1950)

Origin of the strains studied: DBVPG 6252 (CBS 379), unknown; DBVPG 6354 (CBS 1515), fermenting cucumber brine; DBVPG 6358 (CBS 2141), soil; DBVPG 6367 (CBS 1514), fermenting cucumber brine; DBVPG

44. Saccharomyces Meyen ex Reess /A. Vaughan-Martini and A. Martini

6369 (CBS 6388), fruit of Fragaria ananassa; DBVPG 6402 (CBS 4660), grape must; DBVPG 6413 (CBS 134), unknown; DBVPG 6468 (CBS 8135) and DBVPG 6469 (CBS 8134), soil; DBVPG 6481 (CBS 135), type strain of Candida holmii, buttermilk; DBVPG 6484 (CBS 6440), sewage slick; DBVPG 6749 (CBS 4661), grape must. Type strain: CBS 379 (ATCC 10599; DBVPG 6252; IFO 1128; NRRL Y-1538) from Naganishi, and chosen as type strain by Lodder and Kreger-van Rij (1952). Comments: DNA reassociation studies (VaughanMartini and Kurtzman 1988) revealed 76% nucleotide sequence relatedness between the type strains of S. exiguus and Candida holmii, therefore confirming this teleomorphic-anamorphic relationship. On the other hand, low relatedness between these strains and others designated as S. exiguus led to the hypothesis that the latter are different species. The possible presence of more than one species within the group of strains commonly designated as S. exiguus was also supported by other workers (van der Walt 1970d, Yarrow 1978, Kaneko et al. 1989). This has been confirmed by a second study of DNA base sequence homology enlarged to a greater number of strains. Three separate groups have been identified: the main S. exiguus complex comprised of a number of variably related strains and two new separate species: S. harnettii and 5'. spencerorum (Vaughan-Martini 1995). 44.7. Saccharomyces kluyveri Phaff, M.W. Miller & Shifrine (1956) Synonyms: Saccharomyces smittii Capriotti (1958d) Saccharomyces silvestris Jensen (1967)

Growth in 5% malt extract: After 3 days at 25°C, the cells are globose, ellipsoidal or cylindroidal, (3.5-7.0)x(4.0-11.0)|i,m, single, in pairs or in clusters (Fig. 157). After one month at 20''C, a sediment and a ring are present. Growth on 5% malt agar: After one month at 20°C, the streak culture is cream-colored to tan, fairly flat and smooth to raised and wrinkled or folded, often sectored, glossy or dull, margin undulating or lobate and sometimes fringed with pseudohyphae. Growth on the surface of assimilation media: Pellicles are not formed.

Fig. 157. S kluyueri, CBS 3082. Vegetative cells after 3 days, on YEPG agar, 25T. Bar=10^im.

365

Dalmau plate culture on morphology agar: Pseudohyphae are usually formed. Formation of ascospores: Vegetative cells are transformed directly into asci containing one to four globose to subglobose ascospores. Sporulation was observed on acetate agar after 4 days at 25T. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+ + V

+ +

-

+

-

+ + V

-

Lactose Raflfinose Trehalose Melibiose A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

-

+

-

+ V

-

+ + +

-

+

-

Additional assimilation tests and other growth characteristics: lOOppm Cycloheximide CadaverineHCl + Growth at 37T + L-Lysine + EthylamineHCl + Co-Q: Not determined. Mol% G + C: 41.9, one strain, CBS 3082, (BD: Vaughan-Martini and Kurtzman 1985).

Origin of the strains studied: DBVPG 3103, 3108, 3109, 3452 and 3453, soil; DBVPG 6177 (CBS 3082), Drosophila; DBVPG 6362 (CBS 6545), slime flux; DBVPG 6363 (CBS 6626), tree exudate; DBVPG 6403 (CBS 5828), water-logged soil; DBVPG 6412 (CBS 6548), Drosophila; DBVPG 6430 (CBS 4104), soil; DBVPG 6444 (CBS 4570), unknown; DBVPG 6467 (CBS 4569), unknown. Type strain: CBS 3082 (DBVPG 6177, IFO 1685, NRRL Y-12 651, UCD-FST 51-242) isolated from Drosophila pinicola at Mather, California, U.S.A. Comments: Saccharomyces kluyueri was provisionally included in group 2 of the genus Saccharomyces sensu van der Walt (1970d). Meyer and Phaff (1969), however, suggested that it fit better into group 1, Saccharomyces sensu stricto, because of its apparent close resemblance to Saccharomyces cerevisiae. This was in part due to the results of Barker and Miller (1969), who had observed the formation of a few infertile zygotes between haploid strains of S. kluyveri and S. cerevisiae. McCullough

Vb. Descriptions of teleomorphic ascomycetous genera and species

366

and Herskowitz (1979) also noted physiological crossreactions of pheromones between the two species. Later, Johnston and Mortimer (1986) expressed doubts that S. kluyveri is a true member of the group. In fact, results of an OFAGE (orthogonal field inversion gel electrophoresis) analysis revealed that while typical strains of Saccharomyces sensu stricto have 12-15 variably-sized chromosomes, S. kluyveri has only 3 (later seen to be 5-6, Vaughan-Martini et al. 1993) largesized (>1000kb) chromosomes. That later study also revealed that all other species of Saccharomyces, with the exception of S. dairenensis, are characterized by the presence of at least 10 chromosomes covering all size ranges: small (<500kb), medium (500-1000 kb), and large (>1000kb). In addition, studies of ribosomal RNA sequences (Kurtzman and Robnett 1991) showed that S. kluyveri is the most divergent member of the genus. 44.8. Saccharomyces paradoxus Bachinskaya (1914) Synonyms: Zygosaccharomyces paradoxus (Bachinskaya) Klocker (1924) Zygosaccharomycodes paradoxus (Bachinskaya) Nishiwaki (1929) Saccharomyces mangini Guilliermond var. tetraspora (Beijerinck ex Dekker) Stelling-Dekker (1931) Saccharomyces cerevisiae Meyen ex E.G. Hansen var. tetraspora (Beijerinck ex Dekker) Phaff, M.W. Miller & Shifrine (1956) Saccharomyces cerevisiae Meyen ex E.G. Hansen var. terrestris Jensen (1967) Saccharomyces douglasii Hawthorne & Philippsen (1994) nom. nud.

Growth in 5% malt extract: After 3 days at 25°C, the cells are globose, ellipsoidal or cylindroidal, (2.57.0)x(3.0-8.5)|im, single, in pairs or in clusters. After one month at 20°C, a sediment and a ring are present. Growth on 5% malt agar: After one month at 20''C, the streak culture is cream-colored to tan, smooth to raised and dull; the margin is undulating or lobate and sometimes fringed or smooth. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: Pseudohyphae are occasionally formed. Formation of ascospores: Vegetative cells are transformed directly into asci containing one to four globose to subglobose ascospores. In most strains over 50% of the cells sporulate and ascospores are highly viable. Sporulation, when observed, occurs on almost any medium such as malt extract agar, yeast extract, glucose agar (YEPG), potato agar and acetate agar in 2-A days at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

+ + + V

Lactose Raffinose Trehalose Melibiose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ +

s

-

+ V

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

-

+

-

+

-

+

V

+

-

growth

CadaverineHCl 100 ppm Cycloheximide L-Lysine Active fructose transport EthylamineHCl Growth at 3TC + Co-Q: Not determined. Mol% G + C: 42.0^3.1, CBS 432, CBS 5829, DBVPG 6304 {T^: Vaughan-Martini, unpublished data).

Origin of the strains studied: DBVPG 6045 (CBS 406), type strain of S. mangini var. tetraspora, oak exudate; DBVPG 6303 (UCD-FST 52-153) and DBVPG 6304 (UCD-FST 51-186), Drosophila; DBVPG 6411 (CBS 432), tree exudate; DBVPG 6466 (CBS 5829) type strain of S. cerevisiae var. terrestris, soil; DBVPG 6487, DBVPG 6490, DBVPG 6491, DBVPG 6493 and DBVPG 6494, tree exudates. Type strain: CBS 432 (DBVPG 6411, IFO 10609, IGC 4570, NRPIL Y-17217) was designated as the neotype. Comments: Recent ecological, taxonomic and genetic studies have led to the hypothesis that S. paradoxus is the natural parent species of the domesticated species of the Saccharomyces sensu stricto group which includes S. bayanus, S. cerevisiae and S. pastorianus. This premise is supported in part by the results of DNA reassociation studies which showed that while S. paradoxus and S. cerevisiae are related for about 50% of their nucleotide sequences, relatedness with S. bayanus and S. pastorianus is less than 20% (Vaughan-Martini 1989). In addition, Naumov (1986b, 1987c) found tl^t effective mating does not occur between S. paradoxus and S. bayanus or with S. cerevisiae. In light of the above results, and considering the ecological separation of S. paradoxus from the other three species (only natural sources in contrast to mostly artificial fermentation environments for the other three, Phaff et al. 1956, Rosini et al. 1982a, Rosini 1984, Naumov and Nikonenko 1988), it seems appropriate that this species be considered a separate member of the Saccharomyces sensu stricto complex.

44. Saccharomyces Meyen ex Reess /A. Vaughan-Martini and A. Martini

44.9. Saccharomyces pastorianus E.C. Hansen (1904) Synonyms: Saccharomyces carlsbergensis E.C. Hansen (1908) Saccharomyces monacensis E.C. Hansen (1908)

Growth in 5% malt extract: After 3 days at 25°C, the cells are globose, ellipsoidal or cylindroidal, (2.28.0)x(3.5-13.5)jim, single, in pairs or in clusters. After one month at 20°C, a sediment is present. Growth on 5% malt agar: After one month at 20°C, the streak culture is cream-colored to light tan, fairly flat and smooth with the margin slightly undulating or lobate and sometimes fringed or smooth. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: Pseudohyphae are generally not present. Formation of ascospores: Vegetative cells are transformed directly into asci containing one to four globose to subglobose ascospores. In most strains sporulation is less than 2% and ascospores are usually not viable. Sporulation, when observed, occurs only on acetate agar after 10-14 days at 2 5 T .

Fermentation: Glucose Galactose Sucrose Maltose

+ V V

+

Lactose Raffinose Trehalose Melibiose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ +

s

-

+ V

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

-

+

V

-

+

367

6047 (CBS 1538), unknown; DBVPG 6257 (CBS 1260), unknown; DBVPG 6258 (CBS 1486), beer; DBVPG 6261 (CBS 1503), type strain of S. monacensis, beer; DBVPG 6282 (Carlsberg BK 2233), DBVPG 6283 (Carlsberg BK 2230), DBVPG 6284 (Carlsberg AJL 248) and DBVPG 6285 (Carlsberg M 1563), all probably from beer. Type strain: CBS 1538 (ATCC 12752, DBVPG 6047, IFO 0613, NCYC 392, NRRL Y-1551), has been designated as the type strain and is probably isolated from beer. Comments: Some problems have been encountered distinguishing between the species S. cerevisiae and S. pastorianus since the two are phenotypically close. While the large majority of strains belonging to S. cerevisiae grow at temperatures up to 40°C, a sole exception was seen for the type strain ofS. oviformis, now a synonym ofS. cerevisiae. None of the strains of S. pastorianus studied were able to grow above 34''C. As a result, temperature can be a reliable criterion for the separation of strains growing above 34°C. A recent study on the ability to actively transport fructose has shown that strains belonging to S. paradoxus and S. cerevisiae are consistently characterized by a negative fructose transport system. By contrast, strains of S. hayanus and S. pastorianus actively transport fructose (Rodrigues de Sousa et al. 1990). Extensive genetic and molecular studies of numerous brewery yeasts appear to indicate that S. pastorianus is the most favorable species for beer making. This is in spite of the fact that the type strains of two of the other species of the Saccharomyces sensu stricto complex {S. cerevisiae and S. bayanus) were originally isolated from beer.

V

V

-

V V

growth

lOOppm Cycloheximide CadaverineHCl Active fructose transport + L-Lysine Growth at 37T EthylamineHCl Co-Q: 6 (Yamada et al. 1976b). Mol% G + C: 38.5-39.5, AJ 4033, AJ 4034, AJ 4059, AJ 53137 (Jj^: Nakase and Komagata 1971e); 41.1,, CBS 1513, (BD: Vaughan-Martini and Kurtzman 1985); 41.2^2.0, CBS 1513, CBS 1538 (7;^ VaughanMartini, unpublished data).

Origin of the strains studied: DBVPG 6033 (CBS 1513), type strain of ^S. carlsbergensis, brewery; DBVPG

44.10. Saccharomyces rosinii Vaughan-Martini, Barcaccia & Pollacci (1996) Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal or elongate, (3.0-5.5)x(3.5-7.0) |im, and single or in pairs. After one month at 20°C, a sediment is present. Growth on 5% malt agar: After one month at 20°C, the streak culture is butyrous and light cream-colored. The surface is smooth and glossy and the margin is entire or crenate. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: pseudohyphae are formed.

No

Formation of ascospores: Vegetative cells are transformed directly into persistent asci containing one to two globose ascospores. Very limited sporulation was observed with asci containing one or two globose ascospores. Sporulation was obtained after 9-14 days on acetate agar at 20°C or in YEPG at 5°C for 20-25 days.

Vb. Descriptions of teleomorphic ascomycetous genera and species

368

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ +

Assimilation:

Lactose Raffinose Trehalose Melibiose A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: CadaverineHCl L-Lysine EthylamineHCl Co-Q: Not determined. Mol% G + C: Not determined.

lOOppm Cycloheximide Growth at 37°C

-

Origin of the strains studied: DBVPG 6747 (CBS 7127) and DBVPG 6750 (CBS 7128), both of unknown origin. Type strain: CBS 7127 (DBVPG 6747). Comments: See Comments under S. dairenensis. 44.11. Saccharomyces servazzii Capriotti (1967) Growth in 5% malt extract: After 3 days at 25''C, the cells are subglobose to ellipsoidal, (3.0-4.5)x(4.05.5) (im, and single or in pairs. After one month at 20°C, a sediment and a thin ring are present. Growth on 5% malt agar: After one month at 20''C, the streak culture is tan, flat, smooth with faint striations, waxy and glossy; the margin is slightly crenate. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: Pseudohyphae are not formed. Formation of ascospores: Vegetative cells are transformed directly into asci containing one to four globose to short ellipsoidal ascospores. Sporulation was observed on acetate agar after 7 days at 25T. Fermentation: Glucose Galactose Sucrose Maltose

+ +

-

Lactose Raffinose Trehalose Melibiose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ -

Additional assimilation tests and other growth characteristics: CadaverineHCl lOOppm Cycloheximide + L-Lysine lOOOppm Cycloheximide + Growth at 37T EthylamineHCl Co-Q: Not determined. Mol% G + C: 33.9, CBS 4311 {T^: Yarrow and Nakase 1975); 34.435.9, 2 strains {T^: Yarrow 1984a); 36.6, CBS 4311 (BD: VaughanMartini and Kurtzman 1988).

Origin of the strains studied: DBVPG 6355 (CBS 4311), from soil; DBVPG 6360 (CBS 6865) of unknown origin. Type strain: CBS 4311 (DBVPG 6355, NRRL Y-12 661). Since a type was not designated for this species by Capriotti (1967), one of the isotypes was chosen by Yarrow (1984a) as the lectotype. Comments: See Comments under S. unisporus. 44.12. Saccharomyces spencerorum Vaughan-Martini (1995) Growth in 5% malt extract: After 3 days at 25°C, the cells are subglobose to ellipsoidal, elongate, (2.55.0)X(3.5-6.5) jim, single or in pairs. After one month at 20°C, a sediment is present and often also a ring and a film. Growth on 5% malt agar: After one month at 20°C, the streak culture is butyrous, cream-colored to tan, smooth with light striations, flat and rather spreading, glossy, and the margin usually entire. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: Pseudohyphae are not formed. Formation of ascospores: Vegetative cells are transformed directly into asci containing one or two, rarely four, globose to ellipsoidal ascospores.

44. Saccharomyces Meyen ex Reess /A. Vaughan-Martini and A. Martini

-

Formation of ascospores: Vegetative cells are transformed directly into persistent asci containing one or two large, highly refringent, globose ascospores. Sporulation was observed on acetate agar and YM agar in some strains in 7-9 days at 25''C.

-

Fermentation:

Sporulation was observed on acetate agar and V8 agar after 7-10 days at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s

-

+ +

-

+

-

+

-

Lactose Raffinose Trehalose Melibiose 7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+

-

+ + s

-

Additional assimilation tests and other growth characteristics: CadaverineHCl L-Lysine EthylamineHCl Co-Q: Not determined. Mol% G + C: 34.4-35.1,

+ + +

lOOppm Cycloheximide Growth at ?>TC

369

+

CBS 3019, CBS 5530 {T^: Yarrow 1978).

Origin of the strains studied: DBVPG 6746 (CBS 3019), soil; DBVPG 6748 (CBS 5530), gut of Psychidae larva on Acacia hereocantha. Type strain: CBS 3019 (DBVPG 6746), from soil. Comments: Thiamine is required for growth (Yarrow, personal communication). For additional information see the Comments under S. exiguus. 44.13. Saccharomyces transvaalensis van der Walt (1956c) Synonym: Pachytichospora transvaalensis (van der Walt) van der Walt (1978)

Growth in 5% malt extract: After 3 days at 25°C, the cells are globose, ovoidal or elongate, (3.0-5.5)x(3.57.0) [im, single or in pairs. After one month at 20°C, a sediment is present. Growth on 5% malt agar: After one month at 20°C, the streak culture is butyrous and light cream-colored. The surface is smooth and glossy and the margin is entire or crenate. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: No pseudohyphae are formed.

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

+ +

-

+

-

Lactose Raffinose Trehalose Melibiose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V V

-

+

-

Additional assimilation tests and other growth characteristics: lOOppm Cycloheximide CadaverineHCl v Growth at 37°C L-Lysine v EthylamineHCl Co-Q: 6 (Yamada et al. 1976b). Mol% G + C: 32.0, CBS 2186 (Yarrow & Nakase 1975); 34.1-34.4, 3 strains (von Arx 1977b, 1978).

Origin of the strains studied: DBVPG 6756 (CBS 7662) and DBVPG 6757 (CBS 2186), soil. Type strain: CBS 2186 (DBVPG 6757), isolated by van der Walt from soil in Mozambique. Comments: Although the species transvaalensis was originally classified under the genus Saccharomyces (van der Walt 1956c), a subsequent study showed an absence of interfertility between mating types ofS. transvaalensis and two strains classified as the most phenotypically similar species, S. dairenensis (van der Walt and Liebenberg 1973b). This prompted van der Walt (1978) to create the genus Pachytichospora to accommodate S. transvaalensis with its distinctive ascospores, which upon examination by transmission electron microscopy (TEM), appeared different from those of the type strain of S. dairenensis (van der Walt and Liebenberg 1973b). A recent study of DNA sequence relatedness (Vaughan-Martini and Barcaccia 1996) has demonstrated that while two of the four known strains of S. transvaalensis are homologous

Vb. Descriptions of teleomorphic ascomycetous genera and species

370

to the type strain of S. castellii, the other two show an intermediate relationship with both that species and the type strain of S. dairenensis. In view of this intermediate position between two unrelated taxa, it was deemed appropriate to reestablish the species S. transuaalensis (Vaughan-Martini and Pollacci 1996). This separation is supported by the finding that interspecific rRNA sequence differences between the type strains of S. castellii, S. dairenensis and S. transvaalensis averaged 10% (Kurtzman, personal communication). The same study also noted no intraspecific variation in 600 nucleotides of rRNA between the same strains, which should fiarther justify the abolition of the genus Pachytichospora. It should be recognized that it is difficult to clearly separate the taxa S. castelli, S. dairenensis and S. transvaalensis solely on the basis of conventional taxonomic criteria. A definite resolution is possible with the use of techniques of molecular taxonomy such as nucleotide base sequence relatedness as determined by DNA/DNA reassociation experiments, examination of comparable rRNA sequences, or the determination of electrophoretic karyotypes obtained by PFGE (pulsed field gel electrophoresis).

Assimilation:

44.14. Saccharomyces unisporus Jorgensen (1909)

Origin of the strains studied: DBVPG 6368 (CBS 398), unknown; DBVPG 6414 (CBS 399), naichin; DBVPG 6429 (CBS 2422), kefyr grains; DBVPG 6445 (CBS 3004), feces; DBVPG 6482 (CBS 1543), unknown; DBVPG 6483 (CBS 1575), cheese. Type strain: CBS 398 (ATCC 10612, DBVPG 6368, IFO 0316, NRRL Y-1556), received from the Carlsberg laboratories in 1924, was designated as the type strain.

Synonym: Saccharomyces mongolicus Naganishi (1928)

Growth in 5% malt extract: After 3 days at 25°C, the cells are globose to short ellipsoidal, (2.5^.5)x(3.06.0) |im, and single or in pairs. After one month at 20°C, a sediment and a ring are present. Growth on 5% malt agar: After one month at 20''C, the streak culture is cream-colored, flat, usually glossy, smooth, sometimes with light striations, and the margin is entire or undulating. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: Pseudohyphae are not formed. Formation of ascospores: Vegetative cells are transformed directly into asci containing one, occasionally two, globose to subglobose ascospores. Sporulation was observed on acetate agar and YM agar after 7-10 days at 25°C.

Fermentation: Glucose Galactose Sucrose Maltose

+ +

-

Lactose Raffinose Trehalose Melibiose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

V

-

/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

+ s -

growth

CadaverineHCl + lOOppm Cycloheximide + L-Lysine + lOOOppm Cycloheximide + EthylamineHCl + Growth at 37"C v Co-Q: 6 (Yamada et al. 1976b). Mol% G + C: 32.4-32.7, AJ 4085, AJ 5248, AJ 5253 (7-,^: Nakase and Komagata 1971e); 35.4-35.7, DBVPG 6368 (CBS 398), DBVPG 6414 (CBS 399) (BD: Vaughan-Martini and Kurtzman 1988)

Comments: Even though Yarrow and Nakase (1975) noted that S. unisporus has many phenotypic similarities with the other species of Saccharomyces sensu lato {sensu van der Walt 1970d) i.e., S. castellii, S. dairenensis and S. servazzii, S. unisporus is easily distinguishable by having predominantly one-spored asci, as well as by the ability to grow on ethylamine, cadaverine and L-lysine as sole nitrogen sources. The results of a DNA reassociation study (Vaughan-Martini and Kurtzman 1988) supported the retention of these taxa as separate biological species since nucleotide sequence similarities between them were never greater than 19%. Comments on the species included in the complex Saccharomyces sensu stricto The collective group of species denominated as Saccharomyces cereuisiae (sensu Yarrow 1984a) includes the most industrially exploited microorganisms known to man as well as the organism of choice as a model system of the eukaryotic cell (Mortimer and Schild 1985, Silverman 1987, Clark-Walker 1989). The variable physiological behavior often observed for Saccharomyces sensu stricto (Scheda and Yarrow 1966, 1968) has resulted over the

44. Saccharomyces Meyen ex Reess /A. Vaughan-Martini and A. Martini

years in the proposal of innumerable new epithets for conspecific strains. Genetic analysis has shown that the variable phenotypic expression exhibited by these strains is the result of the presence of multiple gene loci (Carlson 1987), which can be active, silent or missing, rather than because of the existence of genetically distinct species. It has also been demonstrated that these species, for the most part domesticated as a result of millennia of exploitation in man-created environments, are often polyploid or aneuploid. This explains why conventional mating as a tool for genetic study and strain improvement has been arduous and also why definite identification of a strain of S. cerevisiae or some other related species is often an almost impossible task. A series of DNA hybridization analyses (Rosini et al. 1982b, Vaughan-Martini and Kurtzman 1985, VaughanMartini and Martini 1987a, 1993, Vaughan-Martini 1989), as well as traditional genetic studies (Naumov 1986b, Banno and Kaneko 1989) have shown that Saccharomyces sensu stricto includes four variably related species: S. hayanus, S. cerevisiae, S. paradoxus and S. pastorianus. Intermediate values of nucleotide sequence homology

371

have been found between some species of this complex: 72% between S. bayanus and S. pastorianus and about 50% between S. cerevisiae and both S. pastorianus and S. paradoxus. Low nucleotide sequence homology was seen between S. bayanus and S. cerevisiae and between S. paradoxus and S. bayanus or S. pastorianus. These results were in part confirmed by studies of chromosomal and gene loci polymorphisms (Holmberg 1982, Johnston and Mortimer 1986, Johnston et al. 1988, Nilsson-Tillgren et al. 1981, 1983, 1986, Pedersen 1983, 1986). Later studies of ribosomal RNA sequence divergence (Kurtzman and Robnett 1991) have further supported the hypothesis that this is a group of taxa in the early stages of the speciation process. Note in proof James et al. (1997) analyzed relationships among Saccharomyces species from divergence in 18S rDNA. Included in this study was the description of two new species of Saccharomyces: S. kunashirensis James, Cai, Roberts & Collins and S. martiniae James, Cai, Roberts & Collins.

Vb. Descriptions of teleomorphic ascomycetous genera and species

372

45. Saccharomycodes E.G. Hansen M.W. Miller and H.J. Phaff Diagnosis of tlie genus Large, diploid, lemon-shaped (apiculate) or elongate cells, which reproduce by bipolar budding on a very broad base (bud-fission). Pseudomycelium is absent or poorly developed. The spores are spheroidal with an apparently smooth wall; a narrow subequatorial ledge and irregularly spaced surface nodules may be visible. Asci usually contain four spores, occurring in two pairs; upon germination members of each pair ordinarily conjugate. In some strains spores may germinate without conjugation. Sugars are fermented. Nitrate is not assimilated. In liquid media a sediment and a ring are formed. Diazonium blue B reaction is negative. Type species Saccharomycodes ludwigii B.C. Hansen Species accepted 1. Saccharomycodes ludwigii E.G. Hansen (1904) Systematic discussion of the species 45.1. Saccharomycodes

ludwigii E.C. Hansen

(1904) Synonyms: Saccharomyces ludwigii E.C. Hansen (1889) Saccharomycodes ludwigii (E.C. Hansen) E.C. Hansen var. vini Kroemer & Heinrich (1922) Saccharomycodes vini (Kroemer & Heinrich) ex Kudryavtsev (1960) Saccharomycodes bisporus Castelli (1942) Saccharomycodes ludwigii (E.C. Hansen) E.C. Hansen var. bisporus (Castelli) Hjort (1954) Saccharomycodes lipophora Bachinskaya (1941) Saenkia bispora Castelli ex Kudryavtsev (1960)

Growtli in 5% malt extract: After 3 days at 25^C, the cells are lemon-shaped with blunt tips, sausage-shaped, curved, broad-oval, or elongated with a swelling in the middle, (4-7) x (8-23) [im, and occasionally longer; the cells are single or in pairs and sometimes in groups of three. Reproduction occurs by bipolar budding on a broad base, followed by fission (bud-fission). Cells in the process of budding resemble bowling pins (Fig. 158). A sediment

Fig. 158. S ludwigii, CBS 821. Vegetative cells grown on 10% malt agar after 3 days. Bar= 10 ^im.

and a slight ring are present. After approximately one month, a sediment and a ring are in evidence. Growth on 10% malt agar: After 3 weeks the streak culture is cream-colored to tan, nearly smooth, semiglossy, and low convex with an irregular border. Dalmau plate culture on potato agar: Aerobically there are a few short chains of cells. Under the coverslip the pseudomycelium is somewhat better developed, consisting of branched chains of elongated cells. Formation of ascospores: The spores are spheroidal, smooth with a narrow subequatorial ledge which is visible in sections viewed in the electron microscope (Kreger-van Rij 1969b); in freeze-fracture replicas the outer surface of the spores shows irregularly spaced nodules (Simmons and Ahearn 1985); usually there are four spores per ascus in two groups of two (Fig. 159). Some strains produce two spores per ascus. Ascus walls do not rupture or lyse when the spores are mature. For germination of spores see Diagnosis of the genus. Good sporulation was obtained on Gorodkowa agar, in 3 days at 18"C.

Fig. 159. S ludwigii, CBS 821. Asci formed on 10% malt agar after 3 days. Bar= 10 ^im.

45. Saccharomycodes E. C. Hansen / M.W. Miller and H.J. Phaff

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+

-

+

-

+

-

+

Lactose Raffinose Trehalose Melibiose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

-

w +

-

+ 1 Additional assimilation tests and other gro\ characteristics: 2-Keto-D-gluconate Urease 5-Keto-D-gluconate Lipase -

Cadaverine + Gelatin hydrolysis w L-Lysine 1 Cycloheximide 1 |ig/ml + Ethylamine + Cycloheximide lO^ig/ml 50% Glucose Acid production Growth at 30T 5% NaCl/5% glucose + Growth at 3 7 ^ Starch synthesis Co-Q: 6, CBS 821 and 5 additional strains (Yamada et al. 1976a). Mol% G + C: 38.3, strain A J 5323 from the Central Research Laboratories of Ajinomoto Co., Inc., Japan (Nakase and Komagata 1971g).

373

Origin of the strains studied: CBS 821, diploid strain from A.J. Kluyver; CBS 2624, type strain oi Saccharomycodes bisporus Castelli; 2 diploids, 3 short-celled haploids, 3 long-celled haploids from Carlsberg Laboratory in Copenhagen; UCD-FST 72-128, exudate of Quercus gambelii, Arizona; UCD-FST 77-13, exudate from swamp chestnut oak, Quercus prinus (= Q. michauxii), Virginia, U.S.A. Type strain: CBS 821 (ATCC 11313), origin M.W. Beijerinck. Species not accepted in the genus We did not accept Saccharomycodes sinensis Yue (1977) because its characteristics are very different from those of Saccharomycodes B.C. Hansen. It does not assimilate ammonium sulfate as a sole source of nitrogen but requires a complex mixture of amino acids as is present in yeast autolyzate. Although the yeast reproduces by a kind of bud fission, the cells are only about one fourth as long as those ofS. ludwigii. We were unable to detect ascospore formation on Gorodkowa agar or on Kleyn's acetate agar as recommended by Yue (1977). We believe that further studies are required to place this species in an appropriate genus.

Note in proof The nucleotide sequences for Saccharomycodes sinensis and Nadsonia fulvescens var. elongata are identical in the variable 600-nucleotide 5' end of the large subunit rRNA gene, suggesting that the two taxa are conspecific (Kurtzman and Robnett, manuscript in preparation).

374

Vb. Descriptions of teleomorphic ascomycetous genera and species

46. Saccharomycopsis

Schionning

C.R Kurtzman and M.Th. Smith

Diagnosis of the genus Abundant development of true mycelium, often with blastoconidia. Budding cells are present and may be formed on a broad or a narrow base. Arthroconidia are produced by some species. Hyphal septa are usually multiperforate, but may be limited to a single central pore. Asci are usually attached to hyphae and produce 1-4, or rarely 8, ascospores. Ascospores may be hat-shaped, reniform with terminal appendages, spheroidal or ellipsoidal, and may have one or more ledges; surfaces may be smooth or roughened. Some species are fermentative. Nitrate is not assimilated. Coenzyme Q-8 is the predominant ubiquinone. Diazonium blue B reaction is negative.

Type species Saccharomycopsis capsularis Schionning

Species accepted 1. Saccharomycopsis capsularis Schionning (1903) 2. Saccharomycopsis crataegensis Kurtzman & Wickerham (1973) 3. Saccharomycopsis fermentans (C.-F. Lee, F.-L. Lee, Hsu & Phaff) Kurtzman & Robnett (1995) 4. Saccharomycopsisfibuligera(Lindner) Klocker (1924) 5. Saccharomycopsis javanensis (Klocker) Kurtzman & Robnett (1995) 6. Saccharomycopsis malanga (Dwidjoseputro) Kurtzman, Vesonder & Smiley (1974) 7. Saccharomycopsis schoenii (Nadson & Krasil'nikov) Kurtzman & Robnett (1995) 8. Saccharomycopsis selenospora (Nadson & KrasiFnikov) Kurtzman & Robnett (1995) 9. Saccharomycopsis synnaedendra D.B. Scott & van der Walt (1971) 10. Saccharomycopsis vini (Kreger-van Rij) van der Walt & D.B. Scott (1971)

Key to species See Table 38. 1. 2(1). 3(2). 4(3). 5(4). 6(3). 7(6). 8(6). 9(8).

a b a b a b a b a b a b a b a b a b

Galactose assimilated Galactose not assimilated -^ 2 L-Rhamnose assimilated L-Rhamnose not assimilated -^ 3 Cellobiose assimilated —^ 4 Cellobiose not assimilated -^ 6 Inositol weakly or strongly assimilated Inositol not assimilated -^ 5 Growth at 37T Absence of growth at 37°C Glucitol assimilated -^ 7 Glucitol not assimilated -^ 8 D-Gluconate assimilated D-Gluconate not assimilated Glucose fermented Glucose not fermented —^ 9 A^-Acetyl-D-glucosamine assimilated iV-Acetyl-D-glucosamine not assimilated

S. selenospora: p. 381 S. synnaedendra: p. 382

S. fibuligera: p. 377 S. malanga: S. capsularis:

p. 379 p. 375

S. crataegensis: p. 376 S. uini: p. 383 S. fermentans: p. 377 S. javanensis: p. 379 S. schoenii: p. 380

46. Saccharomycopsis Schionning / C.P. Kurtzman and M. Th. Smith

375

Table 38 Key characters of species assigned to the genus Saccharomycopsis Species

Glucose fermentation

Saccharomycopsis capsularis S. crataegensis

Assimilation Galactose L-Rhamnose Cellobiose

iV-Acetyl-Dglucosamine

Glucitol

Gluconate

Inositol

Growth at 37T

+/w

+/w

+/w

+ w/-

S. fermentans

+

S. fibuligera

+/w

S. jauanensis

-

S. malanga

w

-

S. schoenii S. selenospora

+/w

-

S. synnaedendra S. vini

Systematic discussion of the species 46.1. Saccharomycopsis capsularis Schionning (1903) Synonyms: Endomyces capsularis (Schionning) Guilliermond (1909) Williopsis capsularis (Schionning) Zender (1925b) Endomycopsis capsularis (Schionning) Dekker (Stelling-Dekker 1931) Prosaccharomyces capsularis (Schionning) Novak & Zsolt (1961)

Growth on 5% malt extract agar: After 3 days at 25''C, budding cells are spheroidal, ellipsoidal or elongate, (3.0-ll.l)x(7.0-15.8)!im, and single or in pairs. Growth is dull, tannish-white and butyrous to mycelial. Growth on the surface of assimilation media: Pellicles are formed by some isolates. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, but sparingly branched true hyphae and infrequent pseudohyphae. Aerobic growth is tannish-white, dull, and mycelial with surface striations. Colonies are low convex with smooth to broadly lobed margins. A mildly acidic odor is present. Formation of ascospores: Asci may form terminally on the tips of hyphae or they may be intercalary following conversion of a hyphal cell to an ascus (Fig. 160). Each ascus produces two to eight spheroidal ascospores that usually have a subequatorial ring. Asci become deliquescent at maturity. Kreger-van Rij (1970b) reported that single-ascospore isolates produce ascosporogenous colonies indicating the species to be homothallic. Ascospores were observed on YM and Difco yeast morphology agars after 5-10 days at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

+

-

+/w

Lactose Raffinose Trehalose

Fig. 160. S. capsularis, CBS 2519. Asci with ascospores. Asci may arise from hyphae or hyphal cells may be converted to asci. On YM agar, after 12 days, 25T. Bar = 5|im.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + V

-

+

-

V V

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ + + +/w

-

+ + V V

+

-

+ w/-

-

Vb. Descriptions of teleomorphic ascomycetous genera and species

376

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate + Gelatin liquefaction w Saccharate Growth at 37°C 10% NaCl/5% glucose +/w Co-Q: 8, CBS 5063 (Yamada et al. 1976b). Mol% G + C: 43.4, CBS 5063 {T^ : Nakase and Komagata 1971g).

Origin of the strains studied: CBS 2519 (NRRL Y-17639) originally from H. Schnegg, Germany, substrate unknown; CBS 5063 (NRRL Y-7486), Harden's strain 127 originally from the National Collection of Type Cultures (UK), but received by CBS from the University of Hiroshima; CBS 5638 (NRRL Y-7487), from pollen of Xylocopa caffra, South Africa, J.R van der Walt. Type strain: CBS 2519, designated as neotype by Lodder and Kreger-van Rij (1952). 46.2. Saccharomycopsis crataegensis Kurtzman 4&; Wickerham (1973) Synonym: Endomycopsella crataegensis (Kurtzman & Wickerham) von Arx (van der Walt and von Arx 1980)

Growth on 5% malt extract agar: After 3 days at 25°C, budding cells are ellipsoidal to elongate and frequently tapered on one end. The cells measure (2.03.0)X(4.0-9.5) ji.m, and often occur singly. Growth is dull and sometimes powdery, tannish-white and butyrous to mycelial.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w/w/-

+ +/w

7V-Acetyl-D-glucosamine v Methanol Ethanol + Glycerol + Erythritol Ribitol V Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside Salicin D-Gluconate + DL-Lactate +/w Succinate +/w Citrate Inositol Hexadecane Nitrate Vitamin-free -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 39.1, CBS

+ -

Starch formation Gelatin liquefaction Growth at 37°C

-

6447 (BD: Kurtzman, unpublished).

Growth on the surface of assimilation media: Heavy pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant true hyphae with blastoconidia. Pseudohyphae are less frequent. Aerobic growth is grayish-white, dull, powdery and mycelial. Single colonies are low convex with entire to broadly lobed margins. A strong, fragrant odor is produced. Formation of ascospores: This species is heterothallic and all known strains have been isolated as haploid mating types. Conjugation begins within 12 h following mixing of complementary mating types and ascospores may be observed as early as 24 h after pairing. Asci are ellipsoidal and either borne directly on hyphae or supported by short stalks. Occasionally, chains of two to four asci may be formed. Asci form two ascopores and about half of the asci eventually deliquesce. Ascospores are elongated, usually slightly flattened, have a roughened surface, and a median longitudinal ledge (Fig. 161). Ascospores were observed on YM and 5% malt extract agars after 1-7 days at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

w/-

-

Lactose Raffinose Trehalose

Fig. 161.5. crataegensis, CBS 6447 x CBS 6448. Ascus with ascospores. On YM agar, after 2 weeks, 2 5 ^ . Bar = 5 |im.

Origin of the strains studied: NRRL YB-192, Concord grapes {Vitis labrusca), Peoria, Illinois; NRRL Y-5902 (CBS 6447), NRRL Y-5903, NRRL Y-5904 (CBS 6448), NRRL Y-5910, from fallen hawthorne (Crataegus sp.) fruits, Peoria, Illinois. Complementary mating types: NRRL YB-192, NRRL Y-5902, mating type a; NRRL Y-5903, NRRL Y5904, NRRL Y-5910, mating type a. Type strain: CBS 6447, from fallen hawthorne fruits. Comments: S. crataegensis and S. vini have similar habitats and co-occur on the fruits of grapes. Shepherd et al. (1987) and Bolen et al. (1992) reported some strains of S. crataegenis to contain linear DNA plasmids and/or double-stranded RNA plasmid-like molecules.

46. Saccharomycopsis Schionning / C.P. Kurtzman and M. Th. Smith

46.3. Saccharomycopsis fermentans (C.-F. Lee, F.-L. Lee, Hsu & Phaff) Kurtzman & Robnett (1995) Synonym: Arthwascus fermentans C.-F. Lee, F.-L. Lee, Hsu & Phaff (1994a)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal, ellipsoidal or elongate, (2.5-5.0)X(5.0-17.3) [im, and often tapered. The cells are mostly single. Budding may be on either a narrow or rather broad base. Growth is somewhat butyrous and tannishwhite in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, moderately branched true hyphae, but with few blastoconidia. Pseudohyphae are infrequent. Aerobic growth is tannish-white, dull, and low with fine striations. Margins are finely lobed with a narrow band of subaerial hyphae. A faint odor of esters is present. Formation of ascospores: Asci are spindle-shaped and form directly from single cells or following conjugation between two independent cells. Asci become deliquescent at maturity. Each ascus forms two to four ascospores that are oblate-ovoidal and with a narrow equatorial ridge (Fig. 162). Scanning electron microscopy suggests some roughening of spore surfaces (Lee et al. 1994a). Heat treatment of ascosporogenous cultures indicates the species to be homothallic (Lee et al. 1994a). Ascospores were observed on 5% malt extract, YM, and GPY agars after 3-7 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

0

+

-

Lactose Raflfinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V

s

-

377

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + v -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37°C 10% NaCl/5% glucose Co-Q: 8, CBS 7830, 2 additional strains (Lee et al. 1994a). M o l % G + C: 36.5-37.5, CBS 7830, CBS 8731, CBS 8732 (HPLC: Lee et al. 1994a).

Origin of the strains studied: CBS 7830 (CCRC 22530, NRRL Y-17710), soil from a papaya orchard, Taiwan; CBS 7831, CBS 7832, soil from carambola orchards, Taiwan. Type strain: CBS 7830. Comments: In the original description, S. fermentans was assigned to the genus Arthroascus, but rDNA sequence comparisons showed Arthroascus to be a synonym of Saccharomycopsis (Kurtzman and Robnett 1995). Comparisons of nDNA complementarity showed ca. 30% relatedness between A. fermentans and A. javanensis, thus demonstrating the two taxa to be sibling species (Lee et al. 1994a). 46.4. Saccharomycopsis fibuligera (Lindner) Klocker (1924)

Synonyms: EndomycesfibuligerLindner (1907) Endomycopsis fibuliger (Lindner) Dekker (Stelling-Dekker 1931) Pichia fibuliger (Lindner) Boidin, Pignal, Lehodey, Vey & Abadie (1964) Endomyces lindneri Saito (1913) Saccharomycopsis lindneri (Saito) Klocker (1924) Endomycopsis fibuliger (Lindner) Dekker var. lindneri (Saito) Dekker (Stelling-Dekker 1931) Endomyces hordei Saito (1914) Saccharomycopsis hordei (Saito) Klocker (1924) Endomycopsis fibuliger (Lindner) Dekker var. hordei (Saito) Dekker (Stelling-Dekker 1931) Candida lactosa Dwidjoseputro & Wolf (1970) 1 Endomycopsis bubodii Sakai & Caldo (1985) nom. nud. Fig. 162. S. fermentans, CBS 7830. Asci with ascospores. After 1 week Botryoascus cladosporoides Martinez, Gonzalez, Abarca & Cabaiies (1990) on 5% malt extract agar, IS^C. Bar = 5 ^im.

Vb. Descriptions of teleomorphic ascomycetous genera and species

378

Growth on 5% malt extract agar: After 3 days at 25°C, budding cells are ovoidal to elongate, (2.25.l)x(3.3-12.5) |im, sometimes tapered, and occur singly, or less frequently in pairs. Growth is dull white, sometimes powdery, and mycelial. Some strains are noticeably more mycelial than other strains. Growth on the surface of assimilation media: Pellicles are formed by some strains. Dalmau plate culture on morphology agar: After 7 days at 25^C, growth under the coverglass shows abundant true hyphae with varying numbers of blastoconidia, as well as some pseudohyphae. Aerobic growth is dull and gray-white with a somewhat raised center. Tufts of hyphal outgrowths on the colony surface give a diagnostic roughness that generally allows immediate species identification. A pleasant ester-like odor is produced. Formation of ascospores: Asci are spheroidal to ovoidal and may be free, having formed from a single vegetative cell, or attached to the ends or sides of hyphae. Occasionally, asci arise on protuberances from two adjacent hyphal cells, but generally asci are unconjugated. Each ascus forms two to four hat-shaped ascospores that are liberated at maturity (Fig. 163). Kreger-van Rij (1970b) reported that single-spore isolates form ascosporogenous colonies, indicating the species to be homothallic. Ascospores were observed on YM, 5% malt extract, V8 or potato-dextrose agars after 3-30 days at 25*^0.

V

Fig. 163. S. fibuligera, CBS 6266. Asci and ascospores. After 2 days on potato-dextrose agar at 25''C. A curved crystal of 2-D-hydroxy fatty acids is located to the left of the scale bar. Bar = 5 fxm.

Fermentation: Glucose Galactose Sucrose Maltose

+/w

-

+/w +/w

Lactose Raffinose Trehalose

w/-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + V

V V

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ + V V

V V

+ + +/w +/w +/w V

+/w

-

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction +/w w/5-Keto-D-gluconate Saccharate Growth at 37°C +/w V 10% NaCl/5% glucose Co-Q: 8, AJ 4270 (Yamada et al. 1976b). Mol% G + C: 39.3, AJ 4270 {T^ Nakase and Komagata 1970b).

Origin of the strains studied: Wheat flour, U.S.A. (6); chalky bread, U.S.A., Europe (4); yeast cake, U.S.A., Asia (4); macaroni, U.S.A. (9); ensiled maize, U.S.A. (2); beer starter, Tibet (3); lao chao, China (11); murcha, Nepal (17); wine koji, Korea (1); thumba, India (1); ragi, Indonesia (17); bubod, Philippines (13); chica, Bolivia (2); unknown (16). Type strain: CBS 2521 (NRRL Y-2388), from chalky rye bread, Germany. Comments: S.fibuligerais found worldwide in starchy substrates and is the major amylolytic yeast in indigenous food fermentations using rice and cassava (Hesseltine and Kurtzman 1990). Wickerham et al. (1944) were the first to report starch hydrolysis by S.fibuligera,and this discovery formed the basis of the Swedish Symba yeast process in which a mixed culture of S.fibuligeraand Candida utilis is used to break down potato processing wastes to produce yeast cells for cattle feed (Jarl 1969). Cultures of S.fibuligeracommonly exhibit aggregates of crystals when viewed under the light microscope. Kurtzman et al. (1973b) determined that the crystals are comprised of mixtures of C14-C18 2-D-hydroxy fatty acids. Similar crystalline mixtures are found in cultures of Pichia sydowiorum (Vesonder et al. 1970). In the current treatment, Endomycopsis bubodii is given as a possible synonym of S. fibuligera. Cultures of E. bubodii are unavailable, but the description of this species (Sakai and Caldo 1985) suggests that it may be conspecific with S. fibuligera.

46. Saccharomycopsis Schionning / C.R Kurtzman and M. Th. Smith

46.5. Saccharomycopsis javanensis (Klocker) Kurtzman & Robnett (1995) Synonyms: Endomyces javanensis Klocker (1909b) Schwanniomyces javanensis (Klocker) Zender (1925b) Endomycopsis javanensis (Klocker) Dekker (Stelling-Dekker 1931) Schizosaccharomyces javanensis (Klocker) Streiblova (1963) Arthroascus javanensis (Klocker) von Arx (1972)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are elongated and often tapered, (2.55.0)X(7.4-25.0) |im, and occur singly or in pairs. Budding is generally on a broad base. Growth is tannish-white and sparingly butyrous. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25*^0, growth under the coverglass shows moderately branched true hyphae which are devoid of blastoconidia. Pseudohyphae are not present. Aerobic growth is somewhat butyrous, white, semi-glistening, and low convex with a depressed center. Margins are finely lobed. A faint acidic odor is present.

1 ^ ^ ' ^^~%

Fig. 164. S. javanensis, CBS 2555. Asci with ascospores. After 2 days on 5% malt extract agar at 25°C. Bar = 5 [im.

Formation of ascospores: Ascus formation is generally preceded by conjugation which may occur between independent cells or between adjacent cells following dissolution of the cross wall (Kreger-van Rij and Veenhuis 1976a). One to four ascopores form in each ascus, and asci often become spindle-shaped (Fig. 164). The ascospores, which are released at maturity, are often warty and either spheroidal or subspheroidal with an equatorial or subequatorial ledge. Ascosporulation was observed on 5% malt extract, V8 and YM agars after 3-7 days at 25T. Fermentation: absent.

379

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37°C 10% NaCl/5% glucose Co-Q: 8, CBS 2555 (Yamada et al. 1976b). Mol% G + C: 31.5, 31.0, CBS 2555 {T^: Nakase and Komagata Smith et al. 1990a).

-

1971g,

Origin of the strains studied: CBS 2555 (NRRL Y-1483), from Guilliermond and attributed to be Klocker's original strain from soil, Java. Type strain: CBS 2555. 46.6. Saccharomycopsis malanga (Dwidjoseputro) Kurtzman, Vesonder & Smiley (1974) Synonym: Hansenula malanga Dwidjoseputro (Dwidjoseputro and Wolf 1970)

Growth on 5% malt extract agar: After 3 days at 25°C, budding cells are mostly single, and spheroidal, (3.2-6.0) |utm, or ellipsoidal to elongate, (3.0-6.0)x(8.013.0) |im, with many of the elongated cells somewhat tapered. Growth is dull, tannish-white, and often has a somewhat wet appearance. Growth on the surface of assimilation media: Pellicles are formed by some strains. Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass shows abundant, but sparingly branched true hyphae as well as pseudohyphae. Aerobic growth is dull tannish-white, and often appears somewhat wet. Colonies are low convex, striated, and margins are lobed and fringed with hyphae. A faintly acidic odor is present. Formation of ascospores: Asci are spheroidal and may be free, but are usually borne laterally or terminally on hyphae, and may be single or in clusters of up to ten. Ascospores are hat-shaped (Fig. 165). Usually two are formed in each ascus and they are released at maturity. Single-spore isolates gave ascosporogenous

Vb. Descriptions of teleomorphic ascomycetous genera and species

380

colonies indicating that either the species is homothallic or that the spores are diploid. Ascosporulation was observed on YM and 5% mah extract agars after 3-7 days at 25^C.

used for making lao-chao, a fermented rice product, Taiwan (7). Type strain: CBS 6267 (NRRL Y-7175), the type strain of Hansenula malanga, isolated from ragi-tape, Indonesia, by Dwidjoseputro and Wolf (1970). Comments: S. malanga was initially described as a species of Hansenula by Dwidjoseputro (Dwidjoseputro and Wolf 1970) because it was believed that this species assimilated nitrate as a sole source of nitrogen. S. malanga and S.fibuligeraare common to starchy fermented foods, but the two species are readily separated by assimilation tests (Table 38) and from culture odor. S.fibuligerahas a strong fruity odor whereas S. malanga has a faint acidic smell. Cultures of S. malanga are usually characterized by the presence of crystals. Kurtzman et al. (1974) identified 3-D-hydroxypalmitic acid as a major component of these crystals.

Fig. 165. S. malanga, CBS 6531. Asci with ascospores. Note angular cluster of 3-D-hydroxypalmitic acid crystals, lower right. After 3 days on YM agar at 25''C. Bar = 5 ^im.

Synonyms: Endomyces schoenii Nadson & Krasil'mkov (1932) Arthroascus schoenii (Nadson & Krasil'nikov) Bab'eva, Vustin, Naumov & Vinovarova (1985) Pichia nonfermentans Nakase (1971b)

Fermentation: Glucose Galactose Sucrose Maltose

w w

Lactose Raffinose Trehalose

+ + + v + V v + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 5-Keto-D-gluconate + Saccharate 10% NaCl/5% glucose +/w Co-Q: Not determined. Mol% G + C: Not determined.

Starch formation Gelatin liquefaction Growth at 37T

46.7. Saccharomycopsis schoenii (Nadson & KrasiFnikov) Kurtzman & Robnett (1995)

+ +

Origin of the strains studied: Ragi, Indonesia (2); Chinese yeast ball (chiu-yiieh), the commercial starter

Growth on 5% malt extract agar: After 3 days at 25T, the cells are mostly elongated, (2.5-5.0)x(5.024.7) ^im, and may be curved or with irregular constrictions. Some cells show short, hair-like extensions. Cells occur singly and in pairs. Budding is on a broad base. Growth is tannish-white and somewhat butyrous. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows moderately branched true hyphae without blastoconidia. Pseudohyphae are not present. Aerobic growth is tannishwhite, faintly glistening with fine striations, somewhat butyrous, and oppressed except for a slightly raised center. Margins are finely lobed. A faint acidic odor is present. Formation of ascospores: Ascus formation is preceded by conjugation between independent cells or between adjacent hyphal cells. Asci are usually spindle-shaped and deliquescent. One to four ascopores are formed in each ascus, and the spores are spheroidal or subspheroidal with a smooth surface and an equatorial or subequatorial ledge (Fig. 166). Ascospores were observed on 5% malt extract, V8, YM and rice agars after 3-7 days at 25°C.

46. Saccharomycopsis Schionning / C.P. Kurtzman and M. Th. Smith

%J

Xi '""•iH";''

rx

ti

Fig. 166. S. schoenii, CBS 2556. Asci with ascospores. After 4 days on 5% malt extract at 25''C. Bar = 5 ^xm.

Fermentation: absent.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V V

-

s

V V

-

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

-

+ +

-

+

growth

2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 37°C 10% NaCl/5% glucose Co-Q: 8, CBS 7223 (Lee et al. 1994a). Mol% G + C: 34.1, CBS 6423 {T^\ Nakase 1971b); 31.4-35.5, CBS 7223, 4 additional strains {T^: Smith et al. 1990a).

Origin of the strains studied: CBS 7223 (VKM 1073, NRRL Y-17595) exudate of oak (Quercus sp.), de Hoog from VKM; CBS 2556 (NRRL Y-2389), slime flux of oak {Quercus sp.), Phaff; CBS 6423 (IFO 1579), soybean protein factory, Nakase, type strain of R nonfermentans; CBS 6449, rotten tree trunk, van der Walt; CBS 7048, slime flux of oak {Quercus sp.), Bab'eva; CBS 7425, sour rot of grapes, Shann. Type strain: CBS 7223. Comments: In 1954, Kursanov noted the similarity of Endomyces schoenii with Arthroascus javanensis. Bab'eva et al. (1985) and Naumov et al. (1985b) concluded on the basis of genetic studies that E. schoenii

381

should be assigned to Arthroascus, and that it is distinct from A. javanensis, thereby resulting in the reclassification of E. schoenii as Arthroascus schoenii (Bab'eva et al. 1985). The validity of this new combination was substantiated by Smith et al. (1990a) who showed low nDNA relatedness between A. javanensis and A. schoenii. In further comparisons, Smith et al. (1990a) showed high nDNA relatedness between A. schoenii and Pichia nonfermentans, a species earlier considered a synonym of A. javanensis by von Arx et al. (1977) on the basis of phenotypic similarity. Lee et al. (1994a) described a third species of Arthroascus, A. fermentans, and demonstrated that it had low nDNA relatedness with A. javanensis and A. schoenii. Kurtzman and Robnett (1994a, 1995) showed from rRNA/rDNA sequence comparisons that species of Arthroascus were closely related to members of Saccharomycopsis and proposed the transfer of Arthroascus species to Saccharomycopsis. This transfer is discussed further under Comments on the genus. 46.8. Saccharomycopsis selenospora (Nadson & Krasil'nikov) Kurtzman & Robnett (1995) Synonyms: Guilliermondella selenospora Nadson & Krasil'nikov (1928) Endomycopsis selenospora (Nadson & Krasil'nikov) Dekker (Stelling-Dekker 1931)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are ovoidal to long ellipsoidal, (2.05.0)X(5.0-15.0) |im, and occur singly or in pairs. Budding may be on either a narrow or a somewhat broad base. Thin, short cellular extensions often occur giving cells a knobby appearance. Growth is dull and roughened. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant, moderately branched true hyphae with few blastoconidia. Pseudohyphae are infrequent. Aerobic growth is dull, white and mycelial with deep striations that have a segmented appearance. Margins are finely lobed with a narrow band of subaerial mycelium. An acidic, ester-like odor is present. Formation of ascospores: Asci are somewhat spindleshaped and either form at hyphal tips or they can be intercalary. Occasionally, asci form between adjacent hyphae giving the impression of having arisen following conjugation. Ascospores are spheroidal, ovoidal or reniform and those of some strains have terminal appendages that are extensions of the cell wall (Kreger-van Rij and van der Walt 1963) (Fig. 167). Four spores are usually formed in each ascus and asci deliquesce at maturity. Kreger-van Rij (1970b) reported that singlespore isolates are ascosporogenous indicating the species to be homothallic. Ascospores were observed on YM agar after 4 7 days at 2 5 T .

Vb. Descriptions of teleomorphic ascomycetous genera and species

382

Fig. 167. S. selenospora, CBS 2563. An ascus with ascospores. After 10 days on YM agar at 25°C. Bar= 5 p m Inset: Free ascospores showing terminal extensions of the spore wall. Bar= 1 pm.

46.9. Saccharomycopsis synnaedendra D.B. Scott & van der Walt (van der Walt and D.B. Scott 1971d)

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosarnine

Fig. 168. S. synnaedendra, CBS 6161. Asci with ascospores. After 2 weeks on potato-dextrose agar at 25'C. Bar = 5 Fm.

+/w -

Lactose Raffinose Trehalose

-

-

+ + -

-

v

+ + -

-

Synonyms: Botiyoascus synnaedendrus (D.B. Scott & van der Walt) von Am (1972) Pichia microspora Batra (1971)

Growth on 5% malt extract agar: After 3 days at N-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ v -

s -

Growth on the surface of assimilation media: Some strains form pellicles.

-

v

+

+ -

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate + Gelatin liquefaction Growth at 37'C Saccharate 10% NaCI/S% glucose Co-Q: 8, CBS 2562 (Yamada et al. 1976b). Mol% G + C : 30.2, S.A. Meyer (unpublished).

25"C, the cells are infrequently spheroidal, but usually ellipsoidal to elongate, (2.04.0)x(3.0-5.0)pm, often tapered, and occur singly, in pairs, or in small clusters. Growth is tannish-white and mycelial.

-

wl-

Origin of the strains studied: CBS 2562 (NRRL Y- 1357) was originally from Guilliermond, but the source of isolation is unknown; CBS 2563 (NRRL Y-17724) was isolated from tanning fluid in France and originally supplied by J. Boidin. Type strain: CBS 2562.

Dalmau plate culture on morphology agar: After 7 days at 25OC, growth under the coverglass shows abundant, well-branched true hyphae that are devoid of blastoconidia. Pseudohyphae are rare and often only a few cells in length. Aerobic growth is dull, tannish-white, convoluted and mycelial. Margins are finely lobed. A faint acidic odor is present. Formation of ascospores: Asci may be free or form terminally on the tips of hyphae, either singly or in chains of two or three, or hyphal cells may develop into asci. Asci are unconjugated, but conjugations between hyphae as well as between yeast cells are often seen. Each ascus contains two to four hat-shaped ascospores that are liberated at maturity (Fig. 168). It is not known whether the species is homothallic or heterothallic, but germinating ascospores often conjugate with each other raising the possibility of heterothallism. Ascospores were observed on 5% malt extract and potato-dextrose agars after 3-7 days at 2S°C.

Fermentation: absent.

383

46. Saccharomycopsis Schionning / C.P. Kurtzman and M. Th. Smith

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+ V

-

+ + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ + + +

-

+ +

-

+ + w/+ V

+

Additional assimilation tests and other g;rowf characteristics: 2-Keto-D-gluconate Starch formation + Gelatin liquefaction 5-Keto-D-gluconate Saccharate Growth at 3 7 T 10% NaCl/5% glucose Co-Q: 8, CBS 6161 (Yamada et al. 1976b). Mol% G + C: 42.0, (S.A. Meyer, unpublished data).

and occur singly, in pairs, and in small clusters. Growth is dull, tannish-white, and butyrous to mycelial. Growth on the surface of assimilation media: Pellicles are formed on the surfaces of some media. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows abundant moderately branched true hyphae with occasional blastoconidia. Pseudohyphae are infrequent. Aerobic growth is tannish-white and dull with a white, powdery periphery of hyphae. Margins are broadly lobate. A faint, fruity odor is present. Formation of ascospores: Asci are spheroidal to ellipsoidal and are commonly borne on short sterigma on the tips and sides of hyphal cells. Conjugation often occurs between cells before ascus formation. Asci are persistent and contain one to four spheroidal spores that have an equatorial ledge as well as a subequatorial ledge (Fig. 169). Wart-like protuberances on spore surfaces can be seen by SEM (Kurtzman and Wickerham 1973). Single-ascospore isolates give ascosporogenous colonies indicating the species to be homothallic. Ascospore formation was observed on YM, 5% malt extract, and yeast morphology agars after 5-7 days at 25°C.

Origin of the strains studied: CBS 6161 (NRRL Fermentation: Y-7466) tunnel o^Platypus externedentatus, South Africa, Glucose Galactose J.R van der Walt; CBS 6393 (NRRL Y-7404), type strain Sucrose of Pichia microspora, from Crossotarsus wollastoni in Maltose Dipterocarpus indicus, India, L.R. Batra. Assimilation: Type strain: CBS 6161. Glucose

+

V

Lactose Raffinose Trehalose

-

V

-

+ A^-Acetyl-D-glucosamine Methanol Comments: In contrast to the original description of Galactose L-Sorbose + Ethanol +/w S. synnaedendra by Scott and van der Walt (in van Sucrose V Glycerol + der Walt and Scott 197Id), von Arx (1972) reported Maltose V Erythritol the absence of budding yeast cells in cultures of this Cellobiose Ribitol V V Galactitol species. Because members of the genus Saccharomycopsis Trehalose D-Mannitol V typically form budding cells, von Arx (1972) described Lactose D-Glucitol + the genus Botryoascus to accommodate S. synnaedendra. Melibiose Raffinose V a-Methyl-D-glucoside V Upon examining cultures of S. synnaedendra, Kreger- Melezitose Salicin V van Rij (1984f) detected budding cells and rejected the Inulin D-Gluconate DL-Lactate genus Botryoascus. Kurtzman and Robnett (1994a, 1995) Soluble starch Succinate V compared rRNA/rDNA sequences from all known species D-Xylose Citrate of hyphal yeasts and found S. synnaedendra, as well as the L-Arabinose D-Arabinose Inositol other Saccharomycopsis species accepted in the present D-Ribose Hexadecane treatment, to be members of a single clade. Consequently, L-Rhamnose Nitrate V Vitamin-free these data show that Botryoascus is not phylogenetically D-Glucosamine separate from Saccharomycopsis. Additional assimilation tests and other g;rowt characteristics: +/w Starch formation 2-Keto-D-gluconate 46.10. Saccharomycopsis vini (Kreger-van Rij) van Gelatin liquefaction w/5 -Keto-D-gluconate der Walt & D.B. Scott (1971d) Growth at 2>TC Saccharate Synonyms: 10% NaCl/5% glucose

V

Endomycopsis vini Kreger-van Rij (1964a) Endomycopsella vini (Kreger-van Rij) von Arx (van der Walt and von Arx 1980)

Co-Q: 8, CBS 4110 (Yamada et al.. 1976b). Mol% G + C: Not determined.

Growth on 5% malt extract agar: After 3 days at IS^'C, budding cells are ovoidal to elongate and often tapered. Budding cells measure (1.9-4.0)x(3.8-14.l)|im.

Origin of the strains studied: CBS 4110 (NRRL Y-7126, NRRL Y-7290), CBS 4109 (NRRL Y-7127), grapes, Chile; CBS 4097 (NRRL Y-7289), CBS 4376

384

Vb. Descriptions of teleomorphic ascomycetous genera and species

Fig. 169. 5". uini, CBS 4097. Asci with ascospores. After 2 weeks on YM agar at 2 5 ^ . Bar = 5 [im.

(NRRL Y-7291), CBS 4377 (NRRL Y-7292), grape must, Brazil; NRRL Y-5905-Y-5909, NRRL Y-5911-Y-5916, hawthorne {Crataegus sp.) fruits, Peoria, Illinois, U.S.A. Type strain: CBS 4110, from a grape, Chile. Comments on the genus The history of the genus Saccharomycopsis is perhaps the most convoluted of any of the ascomycetous yeast genera. Many of the species currently accepted in Saccharomycopsis were originally assigned to Endomyces Reess, a genus characterized by formation of true hyphae. Yeast phases of some of the species resuk from budding (blastoconidia), whereas those of the other species are from arthroconidium formation (fission). Stelling-Dekker (1931) used this morphological distinction to subdivide Endomyces and placed the budding species in the newly described genus Endomycopsis Dekker while reserving Endomyces for those species that form only arthroconidia. A number of other mycelial species, such as Pichia bispora, P. burtonii, Ambrosiozyma monospora and A. platypodis, were later assigned to Endomycopsis by various authors. In 1971, van der Wak and Scott (197Id) pointed out that Endomycopsis Dekker was illegitimate and reinstated Saccharomycopsis Schionning in its original context (i.e., presence of budding cells, true septate mycelium, and ascospores with double membranes) for placement of certain of the Endomycopsis species. Shortly thereafter, van der Walt (1972) described the genus Ambrosiozyma for mycelial species with dolipore-like septa. Von Arx (1972) promptly emended species assignments in the genus by describing Hormoascus for nitrate-assimilating species of Ambrosiozyma. Later, van der Walt and von Arx (1985) emended Hormoascus to include both nitrateassimilating and non-assimilating species. Botryoascus was described for Saccharomycopsis synnaedendra, a species von Arx (1972) believed not to produce budding yeast cells, and Arthroascus was described for Endomycopsis {Endomyces) javanensis which forms spheroidal ascospores and buds on a broad base (von Arx 1972). Later, van der Walt and von Arx (1980) transferred

Saccharomycopsis lipolytica to the genus Yarrowia, and S. uini and S. crataegensis to Endomycopsella, a genus known only from the illustrations of Boedijn (1960). Saccharomycopsis fibuligera was returned to Endomyces in a paper aptly titled "The adventures of the yeast genus Endomycopsis Dekker" (von Arx and Yarrow 1984). The delimitation of Endomyces from Dipodascus and from Saccharomycopsis and its synonyms has been controversial for a number of reasons. The phylogenetic significance of blastoconidium and arthroconidium formation has been interpreted many ways, as has the significance of ascospore morphology and the ultrastructure of hyphal septa. For example, von Arx and van der Walt (1987) aligned genera of the Endomycetales primarily on the basis of ascospore shape and their possible relatedness to members of the euascomycetes. Additionally, the characteristics of Endomyces decipiens, the type species of the Order Endomycetales, are known only from the drawings of Brefeld (von Arx 1972, von Arx and Yarrow 1984) and subject to wide interpretation. In an effort to preserve the nomenclatural stability of the Endomycetales, Redhead and Malloch (1977) designated as neotype a specimen identified as Endomyces decipiens that was found on Agaricus melleus. Kurtzman and Robnett (1994a, 1995) approached the taxonomic dilemma of the Endomycetales from a molecular phylogenetic perspective. Partial sequences of rRNA/rDNA were compared from the type species of all cultivatable yeast genera as well as from all known species of the mycelial yeasts. These data demonstrated that the yeasts and yeastlike taxa form a clade separate from Schizosaccharomyces, Taphrina/Protomyces, and the euascomycetes. The rDNA analyses also showed that a strain identified as Endomyces decipiens aligned with the yeast clade, but a strain identified as Endomyces scopularum proved to be a euascomycete, thus raising doubts about the phylogenetic affinities of the Order Endomycetales and providing a reason for use of the Order Saccharomycetales for those taxa traditionally assigned to the Endomycetales. The preceding phylogenetic analysis demonstrated that species accepted in the present treatment of Saccharomycopsis form a distinct clade that is separate from other mycelial genera (Fig. 170) as well as from such species as Pichia burtonii, P. scolyti, P bispora and P wickerhamii (C.R Kurtzman and C.J. Robnett, manuscript in preparation). Members of Saccharomycopsis show considerable species-specific variation in the shape of their ascospores, which may be hat-shaped (galeate) or spheroidal to elongate, and with or without equatorial ledges or short polar appendages. Asci are generally spheroidal to ellipsoidal and either free or attached to hyphae. Species previously assigned to Arthroascus and Guilliermondella are morphologically distinguished from one another by ascospore shape and from the remainder of the species in Saccharomycopsis by the appearance of their asci, which are often transformed hyphal cells

46. Saccharomycopsis Schionning / C.P. Kurtzman and M. Th. Smith

385

Zygoascus hellenicus 100 I Dipodascopsis uninucleata var. wickerhamii 100 J ' Dipodascopsis uninucleata var. uninucleata ' Dipodascopsis tothii 100 p Blastobotrys arhuscula g2 I *" Blastobotrys capitulata ^ V - Blastobotrys elegans TLP Blastobotrys aristata 65 I i Stephanoascus farinosus 521 I se" Blastobotrys nivea Blastobotrys proliferans 82 ^ • ^ Sympodiomyces parvus 67 J — Stephanoascus ciferrii Arxula terrestris Arxula adeninivorans 100 r Cephaloascus albidus 1—• r/» Cephaloascus fragrans lOOj- Ambrosiozyma cicatricosa 100 fe? Ambrosiozyma monospora I (7 Hormoascus ambrosiae Lp Hormoascus platypodis ^ * Hormoascus philentomus - ^ Schizoblastosporion starkeyi-henrici ^ — Botryozyma nematodophila - Saccharomycopsis capsularis Saccharomycopsis crataegensis - GuilUermondella selenospora - Saccharomycopsis malanga Q^ I—•'—'^ Saccharomycopsis vini 100 I Saccharomycopsis fibuligera • Botryoascus cladosporo^es 100 p Arthroascus javanensis *— Arthroascus schoenii — Botryoascus synnaedendrus Ascoidea africana 83 Yarrowia lipolytica • Aciculoconidium aculeatum 98| Dipodascus ingens Pichia humboldtii j Dipodascus ovetensis ' Dipodascus ambrosiae Dipodascus magnusii 100 Dipodascus tetrasperma ' Geotrichum fragrans Oeotrichum clavatum Dipodascus capitatus Dipodascus spicifer 58 JIS- I Dipodascus armillariae "*' Endomyces decipiens 79 — Geotrichum klebahnii ^ — ^ Dipodascus aggregatus ~~^ Dipodascus macrosporus ^ r— Galactomyces reessii 91 '— Galactomyces geotrichum 5Q ^ I Dipodascus geniculatus Dipodascus albidus Dipodascus australiensis Geotrichum fermentans I Ashbya gossypii I— Nematospora coryli 100 I Holleya sinecauda LJ— Eremothecium cymbalariae 60*— Eremothecium ashbyi , - Endomyces scopularum Neurospora crassa — Oosporidium margaritiferum Emericella nidulans Schizosaccharomyces pombe

-c

100

y

100

98

Fig. 170. A phylogenetic tree derived from maximum parsimony analysis depicting the mycelial ascomycetous yeasts, yeastlike fungi, and various reference species (Kurtzman and Robnett 1995). The phylogram was calculated from nucleotide divergence in the 5' end of the large subunit rRNA gene (positions 63-680). Branch lengths are proportional to nucleotide differences, and the numbers given on branches are the percentage of frequencies with which a given branch appeared in 100 bootstrap replications. Branches with frequencies of less than 50% were collapsed.

386

Vb. Descriptions of teleomorphic ascomycetous genera and species

that become spindle-shaped as the ascospores are formed central micropore. Consequently, phylogenetic analysis of (Kreger-van Rij 1984c,e). Hyphal septa of all species rDNA nucleotide sequences shows that ascospore shape, assigned to Saccharomycopsis are multiperforate with the and to a lesser extent, septum ultrastructure, are not genusexception of S. javanensis, which has septa with a single specific characters.

47. Saturnispora Liu & Kurtzman / C.P. Kurtzman

387

47. Saturnispora Liu & Kurtzman^ C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal, ovoidal or somewhat elongate. True hyphae are not formed but pseudohyphae may occur Certain of the species form pellicles on the surface of liquid media. Asci may be unconjugated or show conjugation between a parent cell and its bud or between independent cells. Asci may be either persistent or deliquescent and form \-A or, rarely, 5-8 spheroidal ascospores which are ornamented with an equatorial ledge. Glucose is fermented. Neither nitrate nor D-xylose is assimilated. Diazonium blue B reaction is negative. Type species Saturnispora dispora (Dekker) Liu & Kurtzman Species accepted 1. Saturnispora ahearnii Kurtzman (1991) 2. Saturnispora dispora (Dekker) Liu & Kurtzman (1991) 3. Saturnispora saitoi (K. Kodama, Kyono & S. Kodama) Liu & Kurtzman (1991) 4. Saturnispora zaruensis (Nakase & Komagata) Liu & Kurtzman (1991) Key to species See Table 39. 1. 2(1).

a b a b

Trehalose assimilated -^ 2 Trehalose not assimilated Pellicles formed on the surface of liquid growth media Pellicles not formed on the surface of liquid growth media

S. ahearnii: S. saitoi: S. dispora: S. zaruensis:

p. 387 p. 389 p. 388 p. 390

Table 39 Key characters of species in the genus Saturnispora Species

Saturnispora S. dispora S. saitoi S. zaruensis

Assimilation

Pelhcle^

Trehalose

Ribitol

+ + +

+

ahearnii V

Deliquescent asci

+

+

+

+

+

Number of spores per ascus

Circumfluent ledge

1-4 1-2 1^ 1-2

+

on ascospores

+ +

^ Formation of a pellicle on the surface of liquid growth media.

Systematic discussion of the species 47.1. Saturnispora ahearnii Kurtzman (1991b) Growth on 5% malt extract agar: After 3 days at IS^'C, the cells are spheroidal, ellipsoidal or somewhat elongate, (4.0-7.0) x (4.2-12.0) jJim, and occur singly or occasionally in pairs. Growth on the surface of assimilation media: Thin, climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, colonies are low convex, tannish-white in color with a smooth to faintly striated, semi-glistening

surface and a butyrous texture. Colony margins are smooth to slightly scalloped. Hyphae or pseudohyphae are not formed. Formation of ascospores: Asci are either unconjugated or show conjugation between a cell and its bud. The asci form 1 ^ or, rarely, 5-8 spheroidal ascospores that have a thin equatorial ledge. Asci are deliquescent and release their spores soon after formation. Isolation of single ascospores demonstrated this species to be homothallic (Kurtzman 1991b). Ascospores form abundantly within 2-3 days at 25°C on 5% malt extract and YM agars.

The original spelling of the genus name Saturnospora has been treated as an orthographic error.

388

Vb. Descriptions of teleomorphic ascomycetous genera and species

Fermentation:

Pichia dispora (Dekker) Kreger-van Rij (1970c) IPichia krusei Tsuchiya, Fukazawa, Shinoda & Imai (1967) nom. nud.

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

-

Starch formation Gelatin liquefaction Growth at ?)TC

+ + + + + -

growth w -

Co-Q: Not determined. Mol% G + C: 34.9, CBS 6121 (BD: Kurtzman 1991a).

Origin of the strain studied: CBS 6121 (NRRL Y-7555) is the only known strain of S. ahearnii and was isolated from muddy water in the rhizosphere of oyster grass {Spartina alterniflora Loisel) growing in the salt marshes of Barataria Bay in southeastern Louisiana, U.S.A. Type strain: CBS 6121 (NRRL Y-7555), received from D.G. Ahearn, U.S.A. Comments: S. ahearnii is an interesting species because of its close relatedness to S. saitoi. S. ahearnii initially appeared to be a strain of S. saitoi that failed to assimilate trehalose. Comparisons of nuclear DNA complementarity showed the two taxa to have 30% relatedness (Kurtzman 1991b), thus placing them in the category of genetic sibling species that have only recently diverged (Kurtzman 1987b). All known strains of S. saitoi are from Japan, but speculation on whether or not the genetic separation of these two species can be attributed to allopathy is premature until additional strains of both species are isolated and there is a better understanding of their geographical ranges. 47.2. Saturnispora dispora (Dekker) Liu & Kurtzman (1991) Synonyms: Saccharomyces disporus Beijerinck (1908) nom. nud. Debaryomyces disporus Dekker (Stelling-Dekker 1931) Zymodebaryomyces disporus (Dekker) Novak & Zsolt (1961)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ovoidal, (2.5-5.5)x(2.56.5) ^m, and occur singly and in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Rings of growth may occur, but pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither hyphae nor pseudohyphae but only an occasional outgrowth of elongated cells. Aerobic growth is tannishwhite, butyrous, smooth, glistening, and with an occasionally lobed margin. Formation of ascospores: Asci may be unconjugated or, more frequently, they result from conjugation between a parent cell and a bud or from the pairing of independent cells. Each ascus contains one or two spheroidal spores that exhibit an incomplete equatorial ledge which may be barely perceptible under the light microscope (Fig. 171). Asci are persistent. Ascospores were observed on 5% malt extract and YM agars after 10-20 days at 25^C. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

-

Starch formation Gelatin liquefaction Growth at 3TC

+ + + + w/+ -

growth -

Co-Q: 7 (Yamada et al. 1973a). Mol% G + C: 37.6, CBS 794 (T^ Nakase 1972a); 38.0, CBS 794, NRRL Y-7656 (BD: Kurtzman 1991a).

389

47. Saturnispora Liu & Kurtzman / C.P. Kurtzman

produced in each ascus, but the ledge on the spores is sometimes difficult to discern under the light microscope (Fig. 172). The spores are released soon after formation. This species appears to be homothallic. Single-spore isolates from four-spored asci of the type strain gave approximately two-thirds sporogenous colonies and onethird asporogenous colonies. Mixtures of asporogenous cultures showed neither conjugations nor spores. Singlespore isolations from three additional four-spored strains gave only sporogenous cultures (Kurtzman, unpublished data). Ascospores were observed on YM- and 5% malt extract agars after 2-7 days at 25''C.

o O

#%

Zy^

Fig. 171. 5*. dispora, CBS 794. Ascus with ascospores, after 15 days on YMagar, 25°C. Bar = 5!J,m.

Origin of the strains studied: CBS 794 (NRRL Y-1447), Beijerinck's strain from the exudate of an oak (Quercus sp.); NRRL Y-7656 (LKB 801), a strain of unknown origin from K. Kodama, Japan. Type strain: CBS 794 (NRRL Y-1447), Beijerinck's strain. Comments: Kreger-van Rij (1970c) transferred this species from Saccharomyces to Pichia because of the presence of a ledge on the ascospores, but noted that in the transmission electron microscope, the ledge appeared not to be circumfluent. Using the scanning electron microscope, Kurtzman and Smiley (1974) confirmed the thin ledge to traverse only about half of the ascospore circumference. This is in contrast to the other species in the genus which have ascospores with circumfluent ledges. The taxon described as P. krusei is considered to be a synonym of S. dispora, but this needs to be verified from comparisons of DNA relatedness. Separation oiS. dispora and S. zaruensis is discussed under the latter species.

Fermentation: Glucose Galactose Sucrose Maltose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

media:

Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass may show pseudohyphae but not true hyphae. Aerobic growth is light tan, smooth, glistening, butyrous and with a lobate margin. Formation of ascospores: Asci are generally unconjugated but occasional conjugations occur between a cell and its bud. Two to four saturn-shaped spores are

-

+

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+

-

^

Synonym: Pichia saitoi K. Kodama, Kyono & S. Kodama (1962)

Growth on the surface of assimilation Climbing pellicles are present.

Lactose Raffinose Trehalose

-

Assimilation:

47.3. Saturnispora saitoi (K. Kodama, Kyono & S. Kodama) Liu & Kurtzman (1991) Growth on 5% malt extract agar: After 3 days at 25^C, the cells are ovoidal, (2.3-4.5) x (2.8-7.5) fim, and occur singly and in pairs. Growth is butyrous and tannishyellow in color.

+

i>

^ ^ ^O^'

o

i©'

%

Q

+

V

-

+ +

-

+ +

-

ft €# rt

QO

Fig. 172. S. saitoi, CBS 4910. Asci with ascospores, after 7 days on YMagar, 25T. Bar = 5^m.

Vb. Descriptions of teleomorphic ascomycetous genera and species

390

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction + Saccharate Growth at 2>TC 10% NaCl/5% glucose Co-Q: 7 (Yamada et al. 1973a). Mol% G + C: 32.2-33.4, four strains (7;„: Nakase 1972a); 33.0-34.1, CBS 4910, NRRL Y-7820, NRRL Y-7821 (BD: Kurtzman 1991a).

Origin of the strains studied: CBS 4910 (NRRL Y-6671), from exudate of hornbeam (Carpinus sp.); NRRL Y-7655, NRRL Y-7820 through NRRL Y-7826, from K. Kodama, Japan. Type strain: CBS 4910 (NRRL Y-6671), from exudate of Carpinus sp. Comments: The close relatedness between S. saitoi and S. ahearnii is discussed under the Comments section of the latter species. There are few phenotypic differences upon which to separate species of Saturnispora. Nakase (1972a) reported that some strains of S. saitoi assimilate ribitol, thus precluding separation of this species from S. dispora and S. zaruensis by growth differences on standard carbon assimilation tests. However, strains of S. saitoi form pellicles on liquid media and have deliquescent asci, characters not shared by isolates of S. dispora and S. zaruensis.

41 A. Saturnispora zaruensis (Nakase & Komagata) Liu & Kurtzman (1991) Synonyms: Pichia zaruensis Nakase & Komagata (1966) Candida agrestis S. Goto & Oguri (1983)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ovoidal, (2.3-5.6)x(2.56.6) jim, and occur singly and in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed, but thin rings of surface growth may occur. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither hyphae nor pseudohyphae. Aerobic growth is tannishwhite, butyrous, smooth, glistening, and with margins that are occasionally lobed. Formation of ascospores: Asci may be unconjugated or show conjugation between a parent cell and a bud or between independent cells. Asci contain one or usually two saturnoid spores. Asci are persistent. Ascospores were formed on YM and 5% malt extract agars after 10-15 days at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+

-

+

+ + + + Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate Growth at 3 7 T Saccharate 10% NaCl/5% glucose +

Co-Q: 7 (Yamada et al. 1973a). Mol% G + C: 39.5, 39.6, CBS 5799, NRRL Y-7009 (BD: Kurtzman 1991a).

Origin of the strains studied: CBS 5799 (NRRL Y-7008) from exudate of an oak (Quercus serrata complex), Japan; NRRL Y-7009 (AJ 4143) from soil, Japan. Type strain: CBS 5799 (NRRL Y-7008), from exudate of Quercus serrata. Comments: Because there appear to be no differences in growth reactions or cellular morphology, S. zaruensis has been considered a synonym of S. dispora (Kregervan Rij 1970c, Kurtzman 1984d). However, comparisons of nuclear DNA relatedness revealed the two taxa to be separate species (Kurtzman 1991a). Kurtzman (1991a) examined the banding patterns generated by SDS-PAGE electrophoresis of unpurified cellular proteins from all four Saturnispora species and noted that this relatively rapid method allowed separation of S. dispora and S. zaruensis. Additionally, as seen under the scanning electron microscope, ascospores of S. zaruensis have a heavy circumfluent ledge, whereas the equatorial ledge on ascospores of S. dispora is incomplete (Kurtzman and Smiley 1974, unpublished data). Comments on the genus The genus Saturnispora was described by Liu and Kurtzman (1991) for certain saturn-spored species that had been maintained in Pichia (Kreger-van Rij 1970c, Kurtzman 1984d). The relationships among the saturnspored yeasts are discussed in the chapter on the genus Williopsis.

391

48. Schizosaccharomyces Lindner / A. Vaughan-Martini and A. Martini

48. Schizosaccharomyces

Lindner

Ann Vaughan-Martini and Alessandro Martini Diagnosis of the genus Cells are globose to cylindroidal and reproduce by fission. In some species true septate hyphae develop and break into arthrospores. Asci are usually produced by somatic conjugation of vegetative cells. Ascospores may be liberated at an early stage. Ascospores are globose or short ellipsoidal, seldom cylindroidal. Sugars are fermented. Nitrate is not assimilated. Positive starch test in Wickerham's liquid medium. Urea is hydrolyzed. Diazonium blue B reaction is negative. Type species Schizosaccharomyces pombe Lindner Species accepted 1. Schizosaccharomyces japonicus Yukawa & Maki (1931) 2. Schizosaccharomyces octosporus Beijerinck (1894) 3. Schizosaccharomyces pombe Lindner (1893) Key to species See Table 40. 1. 2(1).

a b a b

Usually four spores per ascus, D-gluconate assimilated Usually six to eight spores per ascus, D-gluconate not assimilated -^ 2 Raffinose and sucrose fermented, formation of true septate hyphae Raffinose and sucrose not fermented, true septate hyphae not present

S. pombe:

p. 393

S. japonicus: p. 391 S. octosporus: p. 392

Table 40 Key characters of species of the genus Schizosaccharomyces Fermentation

Species

Assimilation

Sucrose

Raffinose

Sucrose

Raffinose

Sch izosaccharomyces japonicus

+

+

+

S. octosporus

-

S. pombe

+

+

Growth at

D-Gluconate

32T

3TC

+

+

+

-

-

-

+

+

+

V

-

Number of ascospores

True hyphae

6-8

+

n.d.

6-8

-

Q-9

4

Co-Q^

Q-10

^ Co-Q data from Yamada et al. (1973b); n.d.: not detected.

Systematic discussion of the species 48.1. Schizosaccharomyces Japonicus Yukawa & Maki (1931)

Synonyms: Schizosaccharomyces uersatilis Wickerham & Duprat (1945)

^^"'^ "^^-

Growth on 5% malt agar: After one month at 20°C, the streak culture is grayish to light brown, glistening, and slightly raised in the center with irregular striations; the margin is fringed with hyphae. GrOWth

OU t h e

SUrfaCC

of

assimilation

media*.

Pellicles are not formed.

Schizosaccharomyces japonicus Yukawa & Maki var. uersatilis

(Wickerham & Duprat) siooff( 1970) Dalmau plate culturc OU morphology agar: After Octosporomyces japonicus (Yukawa & Maki) Kudryavtsev (1960) 5 ^^ys at 25°C, true septate hyphae and arthrospores are

//aseeawaea/apow/cfl (Yukawa & Maki) Y. Yamada & Banno (1987a)

,, ^

.

. \r,

o ^^ :-^^r ^r J o T^

Hasegawaea japonica (Yukawa & Maki) Y Yamada & Banno var. uersatilis (Wickerham & Duprat) Y Yamada & Banno (1987b)

Growth in 5% malt extract: After 3 days at 25''C, the cells are globose, subglobose, ellipsoidal or occasionally cylindroidal, (5.0-9.0)x(6.0-22.0)|im, single, in pairs or in small groups. Ascospores may be present. A sediment is present at 3 days and after one month at 20°C as well.

r

j

r^

•

^-

11

11

u

formed. Conjugatmg cells as well as ascospores may be present.

j o

o

r

j

Formation of ascospores: Conjugation of cells usually precedes the formation of asci which contain six to eight, sometimes fewer, globose to ellipsoidal ascospores. The asci are evanescent, and released ascospores may remain together in chains or clumps. Mature ascospores of some

Vb. Descriptions of teleomorphic ascomycetous genera and species

392

Type strain: CBS 354 (DBVPG 6274), isolated from strawberry wine by Yukawa and Maki (1931).

Fig. 173. S. Japonicus, CBS 354. True mycelium, vegetative and conjugating cells and 8-spored asci after 3 days. Potato agar, IS'^C. Bar= 10 ^im.

strains may be reniform to allantoid and give an amyloid reaction with Lugol's iodine. Conjugation may also occur between ascospores (Fig. 173). When observed by SEM, the ascospores present a smooth surface (Mikata and Banno 1987). Sporulation was observed on malt-, potato- and corn meal agars after 7 days at 25*'C. Fermentation: Glucose Galactose Sucrose Maltose

+ + v

Lactose Raflfinose Trehalose Melibiose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: lOOppm cycloheximide CadaverineHCl Growth at 37°C + L-Lysine EthylamineHCl Co-Q: not detected (Yamada et al. 1973b). Mol% G + C: 32.3-36.3, CBS 103, CBS 354, DBVPG 6573 (T^: Vaughan-Martini, unpublished data) Linoleic acid: present (Kock and van der Walt 1986).

Origin of the strains studied: DBVPG 6274 (CBS 354) from strawberry wine; DBVPG 6351 (CBS 103), type strain of S. japonicus var. uersatilis; DBVPG 6371 (CBS 5679) from tree exudate; DBVPG 6416 (CBS 102) from grape juice.

Comments: The high DNA relatedness between strains representing the two varieties of S. japonicus demonstrated that there is little reason to separate the species into the varieties japonicus and uersatilis (Vaughan-Martini 1991). This separation was originally based upon a slight difference in the shape and iodine reaction of mature ascospores from some strains (Slooff 1970b, Yarrow 1984b). Johannsen (1981) and Sipiczki et al. (1982) found high percentages of mating between strains of S. japonicus var. japonicus and S. japonicus var. uersatilis, indicating conspecificity. A study of electrophoretic mobility of selected enzymes of four strains representing the two varieties showed identical profiles (Yamada et al. 1987a). 48.2. Schizosaccharomyces (1894)

octosporus Beijerinck

Synonyms: Octosporomyces octosporus (Beijerinck) Kudryavtsev (1960) Schizosaccharomyces slooffiae Kumbhojkar(1972)

Growth in 5% malt extract: After 3 days at 25''C, the cells are subglobose, (4.4-10.0) jim, to cylindroidal, (4.5-7.0) X(9.0-22.0) ^im, single, in pairs or small groups. A sediment is present at 3 days and after one month at 2 0 T as well. Growth on 5% malt agar: After one month at 20''C, the streak culture is gray to grayish-brown, dull, raised irregularly and striated; the margin is entire, sinuous or lobate. Growth on the surface of Pellicles are not formed.

assimilation media:

Dalmau plate culture on morphology agar: After 5 days at 25''C, hyphae were not observed. Ascospores may be present. Formation of ascospores: Conjugation of cells usually precedes the formation of asci containing six to eight, or fewer, ascospores that are globose to short ellipsoidal. Conjugation may also occur between ascospores (Fig. 174). When observed by SEM ascospore surfaces appear papillate (Mikata and Banno 1987). Sporulation was observed on mak-, potato- and corn meal agars after 7-9 days at 25''C. Fermentation: Glucose Galactose Sucrose Maltose

+ v

Lactose Rafifinose Trehalose Melibiose

-

Fig. 174. S. octosporus, CBS 371. Conjugating cells, 8-spored ascus and asci releasing ascospores, after 5 days, malt agar, 25°C. Bar= 10|im.

48. Schizosaccharomyces

Lindner / A. Vaughan-Martini and A. Martini

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

V

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

v -

growth

CadaverineHCl lOOppm cycloheximide L-Lysine Growth at 37''C EthylamineHCl Co-Q: 9 (Yamada et al. 1973b). Mol% G + C: 40, 1 strain (BD: Storck 1966); 38.9, CBS 371 (7;^: Vaughan-Martini, unpublished data). Linoleic acid: not present (Kock and van der Walt 1986).

Origin of the strains studied: DBVPG 4091 and DBVPG 4092 from honey; DBVPG 4093 and DBVPG 4094 from dried figs; DBVPG 6276 (CBS 371) from currants; DBVPG 6278 (CBS 6207) from honey; DBVPG 6434 (CBS 2632) unknown; DBVPG 6443 (CBS 6209), DBVPG 6471 (CBS 373) and DBVPG 6472 (CBS 6206) from honey. Type strain: CBS 371 (ATCC 4206, DBVPG 6276, NRRL Y-855), isolated from Greek currants by Beijerinck, and chosen as the type by Lodder and Kregervan Rij (1952). 48.3. Schizosaccharomyces pombe Lindner (1893) Synonyms: Schizosaccharomyces asporus Beijerinck (1897) Saccharomyces pombe (Lindner) Jorgensen (1898) Schizosaccharomyces uordermanii Wehmer (1906) Schizosaccharomyces mellacei Jorgensen (1909) Schizosaccharomyces formosensis Nakazawa (1914) Schizosaccharomyces formosensis Nakazawa var. akoensis Nakazawa (1914) Schizosaccharomyces formosensis Nakazawa var. tapaniensis Nakazawa (1914) Schizosaccharomyces santawensis Nakazawa (1914) Schizosaccharomyces pinan Nakazawa (1919) Schizosaccharomyces taito Nakazawa (1919) Schizosaccharomyces liquefaciens Osterwalder (1924b) Schizosaccharomyces acidodevoratus Tschalenko (1941) Schizosaccharomyces malidevorans Rankine & Fornachon (1964) Schizosaccharomyces pombe Lindner var. malidevorans (Rankine & Fornachon) Sipiczki, Kucsera, Ulaszewski & Zsolt (1982) Schizosaccharomyces pombe Lindner var. acidodevoratus (Tschalenko) Dittrich (1964)

Growth in 5% malt extract: After 3 days at 25°C,

393

the cells are globose, ellipsoidal or cylindroidal, (3.05.0)X(5.0-15.0-24.0) ^m, single, in pairs or small groups. After one month at 20°C, a sediment is present and sometimes a thin ring. Growth on 5% malt agar: After one month at 20''C, the streak culture is brownish, dull or glistening, slightly raised, striated, and the margin is entire or sinuous. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: After 5 days at 25°C, a few short chains of cells may be observed. Ascospores may be present. Formation of ascospores: Conjugation of vegetative cells precedes the formation of evanescent asci containing two to four globose to ellipsoidal ascospores. The ascospores may cohere in small groups upon release (Figs. 175, 176). Haploid heterothallic strains may be encountered. When observed by SEM, the ascospore surface is warty (Mikata and Banno 1987). Sporulation was observed on malt-, potato- and corn meal agars after 5-6 days at 25''C.

Fermentation: Glucose Galactose Sucrose Maltose

+

-

+ +

Lactose Raffinose Trehalose Melibiose

v -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ +

-

+

-

v + -

Additional assimilation tests and other growth characteristics: CadaverineHCl lOOppm cycloheximide L-Lysine Growth at 37°C EthylamineHCl

Co-Q: 10 (Yamada et al. 1973b). Mol% G + C: 42, 1 strain {T^: Rost and Venner 1964); 35.1-37.5, CBS 356, CBS 357, CBS 1042, CBS 1061, CBS 5557 {T^: Vaughan-Martini, unpublished data). Linoleic acid: not present (Kock and van der Walt 1986).

394

Vb. Descriptions of teleomorphic ascomycetous genera and species

Fig. 175. S. pombe, CBS 356. Vegetative cells after 2 days on YEPG agar, 2 5 T . B a r = 1 0 ^ m .

Fig. 176. S. pombe, CBS 5557. Conjugating cells and 4-spored asci after 6 days on YEPG agar, 2 5 ^ . Bar= 10 ^im.

Origin of the strains studied: DBVPG 6277 (CBS 356) from arak mash; DBVPG 6280 (CBS 357) from cane sugar molasses; DBVPG 6373 (CBS 352) from arak mash; DBVPG 6374 (CBS 358); DBVPG 6418 (CBS 374) from molasses; DBVPG 6448 (CBS 5680) from apples; DBVPG 6450 (CBS 1063) from cane sugar molasses. Complementary mating types: CBS 358 and CBS 1057. Type strain: CBS 356 (DBVPG 6277), received from the Krai collection in 1922, and designated as the type by Lodder and Kreger-van Rij (1952). Comments: The distinction between S. pombe and S. malidevorans was not justified (Vaughan-Martini 1991) after DNA reassociation studies revealed that the type strains share 98% of their genomes. Conspecificity was proposed by Sipiczki et al. (1982) who found mating in all crosses between strains of the two taxa, as well as recombination between their mitochondrial genomes, and similar respiratory chains, as revealed by low temperature cytochrome spectra. Identical electrophoretic enzyme mobilities were found by Yamada et al. (1987a) for all strains of the group. Comments on the genus Low relatedness as seen from DNA reassociation studies

confirmed the separation of the genus Schizosaccharomyces into three species: S. japonicus, S. octosporus, and S. pombe (Vaughan-Martini 1991). This was also demonstrated from hybridization studies (Johannsen 1981, Sipiczki et al. 1982) where interspecific mating was consistently absent. Although a close relationship between 8- and 4-spored species was postulated by Kossikov and Medvedeva (1977), who reported mating between S. pombe and S. japonicus, complete documentation is lacking as to the identity and stability of this hybrid. Sipiczki (1979) also obtained a limited number of prototrophic hybrids by protoplast fusion between recognized strains of the species S. pombe and S. octosporus. It has been postulated, however, that fusion products do not necessarily reflect conspecificity, but rather are the result of a limited genetic exchange still to be clearly defined (Spencer et al. 1985, Vaughan-Martini 1991). In contrast, Sipiczki et al. (1982) found that S. japonicus and related strains had similar low-temperature cytochrome spectra, which were quite different from those of S. pombe and S. octosporus. Over the years, different authors have called for the separation of Schizosaccharomyces into two or even three genera based on studies using various techniques such as composition of coenzyme Q (Yamada et al. 1973b), low-temperature cytochrome spectra (Sipiczki et al. 1982), fatty acid profiles (Kock and van der Wah 1986), and ascospore surface morphology as seen by SEM (Mikata and Banno 1987). As a result of these studies, Yamada and Banno (1987a) proposed the creation of the genus Hasegawaea for the species S. japonicus, the reinstatement of the genus Octosporomyces for the species S. octosporus, and the maintenance of Schizosaccharomyces for S. pombe. Kurtzman & Robnett (1991), in a study of ribosomal RNA, found that strains comprising S. japonicus were somewhat divergent from the other two species of the genus. However, these authors felt that the distances were not sufficiently great to justify the division of the genus Schizosaccharomyces as proposed by Yamada and Banno (1987a).

395

49. Sporopachydermia Rodrigues de Miranda / M.A. Lachance and H.J. Phaff

49. Sporopachydermia Rodrigues de Miranda M.A. Lachance and H.J. Phaff Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are ovoid, ellipsoidal or elongate, occasionally curved. Pseudomycelium and true mycelium are not formed. Cultures growing on agar media have a strong, unpleasant odor. Conjugation may or may not precede ascus formation. The ascospores are spheroidal, subglobose, ellipsoidal, or bacilliform. One to four ascospores are formed per ascus. The spores usually have a thick coat of refractile material. They are liberated from the ascus at maturity, and are kept together by the refractile material. Glucose fermentation is absent or very weak. Nitrate is not assimilated. Inositol as sole carbon source is assimilated. Coenzyme Q-9 is formed. Diazonium blue B reaction can be negative or positive. Type species Sporopachydermia lactativora Rodrigues de Miranda Species accepted 1. Sporopachydermia cereana Rodrigues de Miranda (1978) 2. Sporopachydermia lactativora Rodrigues de Miranda (1978) 3. Sporopachydermia quercuum Lachance (1982) Key to species See Table 41. 1.

2(1).

a b a b

Erythritol assimilated Erythritol not assimilated Growth at 2>TC Growth absent at 37''C

S. cereana: p. 395 -^ 2 S. lactativora: p. 396 S. quercuum: p. 397 Table 41 Key characters of species in the genus Sporopachydermia

Species

Glucose

Assimilation Erythritol

Sporopachydermia cereana

Ribitol

+

-

Salicin

+

+

Succinate w/-

Growth

Acetone -

Curved

Tannic Cadaverine^ acid -

+

+

v

S. lactativora

-

-

+

-

+

+

+

-

+

-

S. quercuum

s/w

-

-

-

+

+

+

+

-

+

^ As sole source of nitrogen.

Systematic discussion of the species 49.1. Sporopachydermia cereana Rodrigues de Miranda (1978) Synonym: Cryptococcus cereanus Phaff, M.W. Miller, Miranda, Heed & Starmer

^^^^^^ Growth on YM agar: After 3 days at 25T, the cells are ellipsoidal to elongate, (2-4)x(4-14)^xm, single, in pairs or in small groups. In some strains, a high proportion of the cells is curved. Growth is butyrous, white to creamcolored, and glistening. Growth in glucose-yeast extract broth: A sediment and a scant pellicle are formed after 2 weeks at 25°C. Dalmau plate culture on corn meal agar: A few

chains of cells may form under the coverslip after 2 weeks at 17"C Formation of ascospores: Asci arise directly from vegetative cells. Asci contain one to four spheroidal to ellipsoidal asCOSpores with a very thick smooth wall

(Fig. 177). The spores are liberated from the ascus at maturity and tend to agglutinate. Sporulation is scant and rare. Malt extract (1%) and McClary's acetate agar are suitable media. Sporulation is enhanced by transferring cultures from malt extract to acetate medium. Strain CBS 6644 sporulates relatively well after one week on malt extract at 25''C followed by three weeks on acetate at \TC. Fermentation: absent.

Vb. Descriptions of teleomorphic ascomycetous genera and species

396

Type strain: CBS 6644, isolated from necrotic somatic tissue of giant saguaro cactus (Carnegiea gigantea), Arizona, U.S.A.

Fig. 177. S. cereana, CBS 6644. Vegetative cells and ascus on McClary's acetate agar. Bar = 5|im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v v + v v -

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + v w/+ -

Additional assimilation tests and other growth characteristics: Cycloheximide lOOmg/1 2-Keto-D-gluconate 1-Butanol Cadaverine + Acetone L-Lysine + Tannic acid EthylamineHCl + DBB 50% Glucose Growth at 3 7 T Gelatin liquefaction Co-Q: 9 (Y. Yamada, personal communication). Mol% G + C: 49.6, CBS 6644 (BD: Phaflfet al. 1974).

4v +

Origin of the strains studied: UCD-FST 72-313 (CBS 6644), from stem rot of giant saguaro cactus {Carnegiea gigantea (Englemann) Britton & Rose), Arizona, U.S.A., is among the many strains isolated from various species of columnar cacti belonging to the subtribe Pachycereinae. Numerous strains are from stem rots of columnar cacti in the subtribe Stenocereinae (e.g., UCD-FST 76-214C, Baja California, Mexico), from cladode rots of prickly pear cacti (Opuntia L. spp., e.g., UWO(PS)87-2411.2, Hawaii, U.S.A.), and from necrotic somatic tissue of other cacti (e.g., UCD-FST 76-406C, Sonora, Mexico).

Comments: Discrepancies between the above and the information given by Phaff et al. (1974), Rodrigues de Miranda (1978, 1984b), or Lachance (1982a) may be to some extent indicative of the heterogeneous nature of S. cereana. Variation occurs between strains in the assimilation of several carbon compounds. We were unable to confirm the weak assimilation of nitrite reported by Rodrigues de Miranda (1984b) for any strain. The problem of variation is complicated by the fact that some, but not all isolates exhibit a characteristic curved cell appearance. This extensive physiological, morphological, and genetic variation does not pattern itself into any evident correlations. Variation is even more pronounced in yeasts that have been designated in the literature (Lachance et al. 1988, Starmer et al. 1990) as members of the "S. cereana complex" because of uncertainties concerning the exact species boundaries of S. cereana. Our preliminary results indicate that the complex may represent up to four species, including S. cereana sensu stricto. Only strains confirmed as authentic members of the species by DNA reassociation with the type strain were used as a basis for the data reported here. The assimilation of erythritol and the lack of growth on tannic acid (0.5% in Yeast Nitrogen Base, with or without added glucose) are consistent throughout the complex, but variation exists in most other characters. Representatives of the "S. cereana complex" were present in 30% of approximately 1700 samples of necrotic somatic tissue of cacti examined so far by Starmer and coworkers (1990), making it the second (after Pichia cactophila) most abundant cactophilic yeast. The conspicuous absence of S. cereana from cactus fruit samples has been attributed to the abundance, in cactus fruit, of yeasts capable of producing killer toxins to which certain strains of S. cereana are sensitive (Starmer et al. 1987). Moreover, a negative correlation exists between the presence of S. cereana in individual samples of prickly pear somatic tissue and the occurrence in each sample of strong killer strains of Pichia kluyueri. 49.2. Sporopachydermia lactativora Rodrigues de Miranda (1978) Synonym: Cryptococcus lactativorus Fell & Phaff (1967)

Growth on YM agar: After 3 days at 25°C, the cells are ellipsoidal to elongate, ( 2 ^ ) x (4-6) jim, single, in pairs or in small groups. Growth is butyrous, white to creamcolored, and glistening. Growth in glucose-yeast extract broth: A sediment is formed after 2 weeks at 25°C. Dalmau plate culture on corn meal agar: Pseudomycelium or true mycelium are not formed after one month at \TC.

49. Sporopachydermia Rodrigues de Miranda / M.A. Lachance and H.J. Phaff

Fig. 178. 5*. lactatiuora, CBS 6989. Vegetative cells and ascus on McClary's acetate agar. Bar = 5 [im.

Formation of ascospores: Asci arise from the conjugation of cells of opposite mating types, or in diploid strains, directly from vegetative cells. They contain one to four spheroidal ascospores with a very thick smooth wall and an oil droplet inside (Fig. 178). The spores are liberated from the ascus at maturity and tend to agglutinate. Sporulation is generally scant in mixtures of compatible cells. It is enhanced by transferring cultures showing signs of sexuality to fresh sporulation media. The diploid strain CBS 6989 sporulates abundantly on 1% malt extract and on McClary's acetate agar after 3-5 days at 25''C. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+

-

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Acetone Tannic acid DBB Growth at 3 7 ^

+ +

+ +

-

+

-

V V

-

+ +

-

+

Additional assimilation tests and other g ro^ characteristics: Cycloheximide lOOmg/1 + 2-Keto-D-gluconate + Cadaverine 1-Butanol L-Lysine EthylamineHCl 50% Glucose Gelatin liquefaction

V

+ +

-

-

+

397

Origin of the strains studied: CBS 5771 and CBS 5772, in two distinct samples of sea water near the Antarctic Peninsula, Fell, U.S.A.; CBS 6058, waste lagoon of asphalt plant, Georgia; CBS 6192, from the mouth of a patient, Finland; CBS 6989, diploid strain selected from a mixture of strains CBS 5771, CBS 5772, and CBS 6192, Rodrigues de Miranda. Complementary mating types: CBS 6912 and CBS 5771. Type strain: CBS 6192, from the mouth of a patient; CBS 5771, from Antarctic sea water, is the isotype. Comments: Rodrigues de Miranda (1984b) designated strain CBS 6989, a diploid selected from a mixture of strains CBS 5771, CBS 5772, and CBS 6192, as the type culture. However, in the original description (Rodrigues de Miranda 1978), strain CBS 6192 had been chosen as the holotype, with CBS 5771 as the isotype. In accordance with Article 7.3, Note 1 of the International Code of Botanical Nomenclature (Greuter et al. 1988), the earlier designation must prevail. Natural isolates of S. lactatiuora are haploid with their mating compatibility apparently controlled by two alleles of a single locus. Strain CBS 6912 is arbitrarily designated as /z+, equivalent to a, following Rodrigues de Miranda's (1978, 1984b) convention, and strains CBS 5771, CBS 5772, and CBS 6058 are of mating type h' (equivalent to a). Minor discrepancies exist between our nutritional data and those given by Rodrigues de Miranda (1978, 1984b). When tested by replica plating on agar media, all four strains studied failed to utilize L-arabinose. Strains CBS 6192 and CBS 6989 grew slowly on D-xylose and rapidly on mannitol and glucitol, whereas the other three gave clearly negative responses on these tests. At variance with the responses in Barnett et al. (1983) was our observation, in all strains, of growth on ribitol as carbon source and lack of growth on cadaverine as nitrogen source. The infrequent isolation of S. lactatiuora precludes the formulation of extensive hypotheses about its ecology, although the species appears to be cosmopolitan in its distribution. Because of its high maximum temperature of growth in contrast to the sea water temperature from which some strains were isolated (ca. O'^C), Fell and Phaff (1967) suggested that its occurrence in sea water could have come from feces of several species of large birds that are common in Antarctica. 49.3. Sporopachydermia quercuum Lachance (1982a) Growth on YM agar: After 3 days at 2 5 T , the cells are ellipsoidal to elongate, frequently curved, (2-3) x (48)(im, single, in pairs or in small groups. Growth is butyrous, white to cream-colored, and glistening.

A positive DBB reaction can be obtained in some cases (see Comments on the genus). Co-Q: 9 (Y. Yamada, personal communication). Mol% G + C: 46.1-46.3, the latter for CBS 5771, type strain of Cryptococcus lactativorus, the former for CBS 5772 (BD: Phaff et al. Growth in glucose-yeast extract broth: A sediment and a very spotty ring are formed after one month at 25°C. 1974).

Vb. Descriptions of teleomorphic ascomycetous genera and species

398

Dalmau plate culture on corn meal agar: A few chains of cells may be formed under the coverslip after 2 weeks at \TC. Formation of ascospores: Asci arise directly from vegetative cells or following conjugation between cells within the same culture (Fig. 179). Asci may bear protuberances indicative of bud-parent cell conjugation. Asci contain one to four ovoid, ellipsoid to bacilliform ascospores with a very thick smooth wall. The spores are liberated from the ascus at maturity and tend to agglutinate. Sporulation is scant on McClary's acetate agar, and is enhanced by transferring cultures exhibiting protuberance formation or conjugation to fresh sporulation medium and incubating at \TC. All strains are sporogenous, strain CBS 8070 being one of the most vigorous. Fermentation: Glucose Galactose Sucrose Maltose

s/w -

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ +

w v + -

Additional assimilation tests and other growth characteristics: Cycloheximide lOOmg/1 + 2-Keto-D-gluconate Cadaverine + 1-Butanol + L-Lysine + Acetone + EthylamineHCl + Tannic acid + 50% Glucose DBB Gelatin liquefaction Growth at 37°C A positive DBB reaction can be obtained in some cases (see Comments on the genus). Co-Q: 9 (Y. Yamada, personal communication). Mol% G + C: 37.8, CBS 8070 (BD: Phaflf, unpublished data).

Origin of the strains studied: UWO(PS)80-118 (CBS 8070, ATCC 56629), UWO(PS)80-141 (ATCC 56630) and other strains were collected from slimy exudates of red oaks (Quercus rubra L.), Ontario, Canada. Type strain: CBS 8070, from red oak (Quercus rubra L.).

Fig. 179. S. quercuum, CBS 8070. Vegetative cells on YM agar. Ascus on McClary's acetate agar (from Lachance 1982a). Bar = 5 |im.

Comments: S. quercuum was described (Lachance 1982a) to accommodate isolates from red oak {Quercus rubra L.) exudates, whose characteristics differed only slightly from those of S. lactativora. The predominance of curved cells and the difference in maximum growth temperature were taken as sufficient grounds for the description of a separate species. This is confirmed by the nearly 8% difference in nDNA base composition with the other two accepted species. Cultures of S. quercuum appear to be mixtures of haploid and diploid cells. Because of the scant sporulation and the tendency of liberated spores to agglutinate, no attempt has been made to determine whether self-fertility is due to homothallism. A difference exists between the maximum growth temperatures reported by different laboratories (Lachance 1982a, Barnett et al. 1983). As this difference is important for the identification of S. quercuum, it is worth mentioning that the measurements reported here were performed on replica plates with both synthetic (YNB-glucose) and complex (YM) agar media. The maximum determined in this way was 34.5±0.5T. A higher value (36±0.5°C) was obtained on media dispensed in tubes and incubated in a heating block (J.E. Kaden and M.A. Lachance, unpublished results). Barnett et al. (1983), using liquid media, reported good growth at 37''C and no growth at 42T. Comments on the genus Rodrigues de Miranda (1978) described the genus Sporopachydermia based on the observation of the formation of thick-walled ascospores in two species of Cryptococcus known not to be basidiomycetous anamorphs (Phaff et al. 1974). Although neither the chemistry nor the evolutionary significance of the spore sheath are understood, such a feature brings together species that represent an evolutionarily coherent assemblage. Ribosomal RNA sequence comparisons (Yamada et al. 1992a) confirmed this view, showing that Sporopachydermia is monophyletic with respect to various other Q-9 genera. Phenetic analysis of the physiological responses of all yeasts given in Barnett

49. Sporopachydermia Rodrigues de Miranda / M.A. Lachance and H.J. Phaff

et al. (1983) shows that the combination of nutritional abilities found in the genus is unique among yeasts with demonstrated ascomycetous life cycles, substantiating the hypothesis that the genus is monophyletic within ascomycetes. A superficial physiological resemblance exists, however, with the asexual species Trigonopsis variabilis, Candida pararugosa, and Candida sorbophila. The nDNA base compositions of members of these taxa fall well within the range exhibited by Sporopachydermia species. The slow but positive diazonium blue B reaction reported in S. quercuum (Lachance 1982b) occurs also in S. lactativora, but not in S. cereana. A purple reaction is observed after two minutes on colonies grown on casein hydrolysis agar medium. Colonies grown on YM agar and subjected to a SO^^C treatment, as recommended by Hagler and Ahearn (1981), gave a yellow reaction (M.A. Lachance, unpublished results). Although surprising, these results are not unparalleled. Summerbell (1985) observed normal (purple) diazonium blue B reactions

399

in several filamentous fungi of ascomycetous affinity, if they were first subjected to an alkali treatment. Yellow reactions occurred in a few basidiomycetous species without alkali treatment. Simmons and Ahearn (1987) examined closely the cell wall structure and the diazonium blue B reaction of S. quercuum, and concluded that the yeast is typically ascomycetous for both traits. They suggested that the positive reaction reported by Lachance (1982b) was most likely the result of impurities present in the chemical. While the complete significance of all these observations remains to be clarified, the sharing of such an unusual property by two Sporopachydermia species acts as additional evidence of their close relatedness. Sporopachydermia appears to be ecologically similar to Clauispora and Pichia, in that these genera contain some species that act as generalists, and others as specialists. The little that is known about S. lactativora suggests that it is a generalist. S. cereana and S. quercuum appear to be specialists, although the small number of isolates of the latter species limits speculation at this time.

Vb. Descriptions of teleomorphic ascomycetous genera and species

400

50. Stephanoascus M.Th. Smith, van der Walt & E. Johannsen M.Th. Smith and G.S. de Hoog Diagnosis of the genus Colonies are restricted, dry, and snow-white. Asexual reproduction is either by multilateral budding (anamorph genus Candida) or by short chains of sympodial conidia on true hyphae (anamorph genus Blastobotrys). Gametangia are formed on hyphae after fusion of two intercalary cells or lateral outgrowths. Asci are globose with firm, thick walls and contain 2-A ascospores. Asci bear a sterile apical cell. Ascospores are oblate to hat- or helmetshaped. Septa with micropores are present. Sugars may be fermented. Nitrate may be assimilated. Diazonium blue B reaction is negative. Type species Stephanoascus ciferrii M.Th. Smith, van der Walt & E. Johannsen Species accepted 1. Stephanoascus ciferrii M.Th. Smith, van der Walt & E. Johannsen (1976) 2. Stephanoascus farinosus de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) 3. Stephanoascus smithiae Gimenez-Jurado (1994) Key to species See Table 42. 1. 2(1).

a b a b

Apical cell on ascus is hemispherical; growth at ST^'C Apical cell on ascus is clavate; growth absent at BT'^C —^ 2 Growth with inositol Growth absent with inositol

Stephanoascus ciferrii:

p. 400

Stephanoascus smithiae: p. 402 Stephanoascus farinosus: p. 401

Table 42 Key characters of species in the genus Stephanoascus Species

Glucose fermentation

Assimilation

Mating system

Inositol +

+

hemispherical

heterothallic homothallic

+

-

clavate clavate

heterothallic

-

+

w

-

S. smithiae

-

+

ciferrii

Apical cell

Succinate

S. farinosus

Stephanoascus

Growth at 37°C

Systematic discussion of the species 50.1. Stephanoascus ciferrii M.Th. Smith, van der Walt & E. Johannsen (1976) Synonyms: Candida ciferrii Kreger-van Rij (1965) Sporothrix catenata de Hoog & Constantinescu (1981) Candida mucifera Kockova-ICratochvilova & Slavikova (1988)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22''C, colonies are 4 mm in diameter, dry, white, and somewhat raised. Budding cells are absent or present, multilateral, and often in short chains. True hyphae are absent or present, 2-3 jim wide, and form a

compact mycelium. Conidia are sympodially produced in dense, swollen clusters; they are terminal or intercalary just below hyphal septa, with marked, sharp denticles bearing conidia. Conidia are formed singly or in short chains about (1.5-3.0)x(3.5-5.5)jim; lower conidia are somewhat larger. Formation of ascospores: Gametangia are formed by conjugation of opposite hyphal cells; the conjugation bridge forms a lateral outgrowth which develops into an ascus. Asci are globose, with firm, thick, persistent walls, and are crowned by a hemispherical sterile cell. Asci

401

50. Stephanoascus M.Th. Smith, van der Walt & E. Johannsen /M.Th. Smith and G.S. de Hoog

contain 2-4 oblate to hat-shaped ascospores measuring (35)x(5-8)|im (Fig. 180). The species is heterothallic. Mating tests are conducted on V8 agar at 28''C. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + V

+

V

+

V

+ + + V

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

+ + + + + + V V

+ + V V

+ n

Additional assimilation tests and other growth characteristics: +

Arbutin v Growth at 37°C + Co-Q: 9, CBS 5295, CBS 6699 and 4 additional strains (Yamada and Smith 1985). Mol% G + C: 46.2^7.0, CBS 6699 (7;^: Gimenez-Jurado et al. 1994).

Origin of the strains studied: CBS 4856 (ATCC 22873), type strain of Candida ciferrii, from a cow, Netherlands; CBS 7409, type strain of Candida mucifera, from liver of a toad, Brazil; CBS 215.79, type strain of Sporothrix catenata, from calf skin, Romania; from fence post (1); from pig (1); from bovine placenta (1); from soil (1). Complementary mating types: CBS 5645 (a), 6699 (a), 7409 {a\ 4856 (a), 5165 (a), 5166 (a), 5295 (a). Isotype strains: CBS 6699 and CBS 5295. Comments: The species is often associated with animals and occasionally found in humans, mainly involved in otitis (Furman and Ahearn 1983). It is slightly thermophilic. The type strain of Candida mucifera from toad liver in Brazil was found to be mating type a, and produces ascospores with the tester strain CBS 5295. Some strains are strongly hyphal and produce conidia from characteristically inflated, denticulate heads. This anamorph has been described as Sporothrix catenata. 50.2. Stephanoascus farinosus de Hoog, RantioLehtimaki & M.Th. Smith (1985) Synonyms; 1 Sporothrix fungorum de Hoog & de Vries (1973) Blastobotrys farinosus de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) IBlastobotrys gigas de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) Fig. 180. S ciferrii, CBS 5295x6699. Asci with ascospores (top). Asci are on the conjugation bridge formed from conjugation of hyphae of opposite mating partners. V8, 28°C, 10 days. Anamorph (bottom) (CBS 215.79) producing short, branched chains of conidia from swollen, denticulate heads; clusters of multilateral budding cells. MEYA, 22''C, 10 days.

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 5 mm in diameter, white, and farinose with flat, glassy margins. Expanding hyphae are straight and somewhat stiff, 1.82.5 |im wide, forming terminal and intercalary groups of

Vb. Descriptions of teleomorphic ascomycetous genera and species

402

primary conidia, (3-5) x (5-7) |u.m, each bearing several globose secondary conidia, 2-3 |Jim in diameter. Formation of ascospores: Asci are formed from fused gametangia laterally on hyphae. They are globose, 7-9 |i,m in diameter, with persistent, firm walls, and are crowned with a cylindrical to clavate top cell. Asci contain 2-A ascospores that are broadly ellipsoidal, 2.0-2.5 [im, with an irregular gelatinous basal brim, the widest diameter about 4jim (Fig. 181). The species is homothallic. Asci are formed on MEYA at 15°C. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

w V

-

Lactose Raffinose Trehalose

V

V

V

+ + V

V

+ + V V V

V V V V V

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n V

+ V

+ V

+ + V V

V V

-

Fig. 181. S. farinosus, CBS 140.71. Asci with ascospores (top). Asci are on the conjugation bridge formed from adjacent cells of a single hypha. MEYA, 15°C, 10 days. Anamorph (bottom) with conidia in compact clusters, formed on small denticles. MEYA, 20''C, 10 days.

n

-

The species is somewhat psychrophilic, with asci developing at 18''C. It is found on dead carpophores of Additional assimilation tests and other growth fungi, be they basidio- or ascomycetous. Blastobotrys characteristics: gigas was isolated from a mummy in ice (Bodenhoff et al. 1979); it differs markedly from the remaining anamorphs Arbutin v Growth at ?>TC Co-Q: 9, IGC 4592 (Gimenez-Jurado et al. 1994). by having large conidioferous denticles. De Hoog et al. Mol% G + C: 48.5^9.9, IGC 4592 {T^: Gimenez-Jurado et al. 1994). (1985), though with hesitation, introduced separate names for the groups within this taxonomic complex. DNA/DNA Origin of the strains studied: CBS 140.71, from the reassociations are needed to determine species borderlines carpophore of Hirneola auricula-judae, Gams, Netherand to evaluate currently used taxonomic criteria in these lands; CBS 421.78, type strain of Bias tobotrys gigas, from hyphal yeasts. a frozen mummy, Bodenhoff, Greenland; CBS 259.70, type strain of Sporothrix fungorum, from carpophore of Fomes fomentarius, Gams, Germany; from carpophore of 50.3. Stephanoascus smithiae Gimenez-Jurado (Gimenez-Jurado et al. 1994) Corticium (1); from carpophore of Hirneola (1); from Synonym: Sphaeriales (1). Candida edax van der Walt & Nel (1968) Type strain: CBS 140.71. Growth on 2% glucose/O.Sy© yeast extract/1% Comments: The species is homothallic. Traquair et al. peptone agar: After 7 days at 20-22°C, colonies are (1988a) reported S. farinosus teleomorphs in strains white to cream-colored, compact, and somewhat raised which de Hoog et al. (1985) found to be different at the center. Budding cells are scarce, multilateral and in morphology and physiology. However, characters are measure (l-2)x(2-12)|im. True hyphae are present, with notoriously variable, as demonstrated by physiological conidia produced from denticle-like structures, either differences between two strains of Sporothrix fungorum terminal or intercalary (Fig. 182). Conidia measure about (1.5-4.0)x(2.0-3.0)fxm. (de Hoog et al. 1985). V

50. Stephanoascus M.Th. Smith, van der Walt & E. Johannsen /M.Th. Smith and G.S. de Hoog

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

-

+/w + + + + + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

403

n

-

+ + + + + + + + + +

-

+ + + n + +

Additional assimilation tests and other growth characteristics: Arbutin Hydrolysis of urea + -

Fig. 182. S. smithiae, CBS 7522.1. Anamorph with conidia formed on denticulate heads. MEYA, 10°C, 10 days.

Formation of ascospores: Gametangia are formed by conjugation of opposite hyphal cells, the conjugation bridge forms a lateral outgrowth which develops into an ascus. Asci are globose, with firm, thick, persistent walls, (5.0-8.0)X(3.0-5.0) jim, and are crowned with a sterile clavate cell. Asci contain one hemispherical or helmetshaped ascospore which has a thick basal brim (Fig. 183). The species is heterothallic. Mating tests are conducted on malt extract agar at 25°C. Fermentation: absent.

Nitrite + 0.01% Cycloheximide + Cadaverine + 0.1% Cycloheximide + Creatinine Growth with Tween 80 Creatine Growth with 5% olive oil Ethylamine Growth at 37T + + Starch formation Co-Q: 9, CBS 7522.1, 7522.2 (Gimenez-Jurado et al. 1994). Mol% G + C: 47.0^7.4, CBS 7522.1, 7522.2 {T^: Gimenez-Jurado et al. 1994).

Origin of the strains studied: CBS 5657 (ATCC 18414, IFO 10273, NRRL Y-17083), type strain of Candida edax, from an insect tunnel, South Africa, van der Walt; CBS 6461, from soil, Japan, Furukawa; CBS 7522.1 (IGC 4646) and 7522.2 (IGC 4647), isotype strains of Stephanoascus smithiae, from soil, Brazil. Complementary mating types: CBS 7522.1 and CBS 7522.2. Isotype strains: CBS 7522.1 (mt a) and CBS 7522.2 (mt a). Comments: A full description of the species was given by Gimenez-Jurado et al. (1994), including results of an extended series of assimilation tests. The species was shown to have one central micropore in the hyphal septa. Its identity as a new species was proven by low DNA/DNA homology values with the remaining Stephanoascus species. Comments on the genus

Fig. 183. S. smithiae, CBS 7522.1x7522.2. Asci with ascospores on oatmeal agar, 1 week, 25°C. Bar = 5|im.

Stephanoascus species are variable in the morphology of their anamorphs and in their physiology. They may be hyphal, with characteristic, sympodial conidiogenous apparatus, or entirely yeastlike. Currently three species are accepted. The authentic strains of S. flocculosus Traquair et al. (1988b) and S. rugulosus Traquair et al. (1988b) proved to be Pseudozyma anamorphs of smut fungi (Boekhout 1995).

404

Vb. Descriptions of teleomorphic ascomycetous genera and species

51. Torulaspora Lindner C.R Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal to ellipsoidal. Pseudohyphae may be present but true hyphae are not formed. Asci are persistent and may be unconjugated or show conjugation between a cell and its bud or between independent cells. Cells with tapered protuberances resembling conjugation tubes may also be present. Asci contain \-A spheroidal ascospores that are either roughened or smooth. Sugars are fermented. Nitrate is not assimilated. Pellicles are absent or weakly formed. Coenzyme Q-6 is produced. Diazonium blue B reaction is negative. Type species Torulaspora delbrueckii (Lindner) Lindner Species accepted 1. Torulaspora delbrueckii (Lindner) Lindner (1904) 2. Torulaspora globosa (Klocker) van der Walt & E. Johannsen (1975) 3. Torulaspora pretoriensis (van der Walt & Tscheuschner) van der Walt & E. Johannsen (1975) Key to species See Table 43. 1. 2(1).

a b a b

Growth at SVC strong and rapid —> 2 Growth at 37°C slow, weak or absent Galactose assimilated Galactose not assimilated

T. delbrueckii: p. 404 T. pretoriensis: p. 406 T. globosa: p. 406

Table 43 Key characters of species in the genus Torulaspora Species

Assimilation Galactose

Maltose

v

Torulaspora delbrueckii

Growth a-MethylD-glucoside

v

0.01% Cycloheximide

v

-

at 37°C s,w,-

T globosa

-

-

-

X

+

T pretoriensis

+

+

+

-

+

Systematic discussion of the species

51.1.

Torulaspora delbrueckii (Lindner) Lindner

Debaryomyces rosei (Guilliermond) Kudryavtsev (1954) Zymodebaryomyces rosei (Guilliermond) Novak & Zsolt (1961)

Torulaspora fermentati Saito (1923)

(1904) Zygosaccharomyces fermentati (Saito) Krumbholz (1933) [non Anamorph: Candida colliculosa (Hartmann) S.A. Meyer & Yarrow; on Zygosaccharomyces fermentati Naganishi (1928)] the basis of phenotypic similarity Saccharomyces fermentati (Saito) Lodder & Kreger-van Rij (1952) Synonyms: Zygosaccharomyces mongolicus Saito (1923) Saccharomyces delbrueckii Lindner (1895) Saccharomyces delbrueckii Lindner var. mongolicus (Saito) Lodder & Zygosaccharomyces delbrueckii (Lindner) Krumbholz (1933) Kreger-van Rij (1952) Debaryomyces delbrueckii (Lindner) Kudryavtsev (1954) Torulaspora mongolica (Saito) van der Walt & E. Johannsen (1975a) Zymodebaryomyces delbrueckii (Lindner) Novak & Zsolt (1961) Saccharomyces torulosus Osterwalder (1924a) Torula colliculosa Hartmann (1903) Saccharomyces cheualieri Guilliermond var. torulosus Dekker Torulopsis colliculosa (Hartmann) Saccardo (1906) (Stelling-Dekker 1931) Eutorula colliculosa (Hartmann) Will (1916) Zygosaccharomyces globiformis Kroemer & Krumbholz (1931) Cryptococcus colliculosus (Hartmann) Skinner (1950) Torulopsis cambresieri Monoyer (Lodder and Kreger-van Rij 1952) Candida colliculosa (Hartmann) S.A. Meyer & Yarrow (Yarrow and Torulopsis stellata (Kroemer & Krumbholz) Lodder var. cambresieri Meyer 1978) Lodder & Kreger-van Rij (1952) Torulaspora rosei Guilliermond (1913) Torulaspora nilssoni Capriotti (1958b) Saccharomyces rosei (Guilliermond) Lodder & Kreger-van Rij (1952) Saccharomyces nilssoni (Capriotti) Santa Maria (1963b)

405

51. Torulaspora Lindner / C.P. Kurtzman Debaryomyces nilssoni (Capriotti) K. Kodama, Kyono, Naganishi & Takahara (1964c) Schwanniomyces hominis Batista, Vieira & Coelho (1959b) Debaryomyces dekkeri Mrak, Phaff, Vaughn & Hansen ex Kudryavtsev (1960) Zymodebaryomyces dekkeri (Mrak, PhafF, Vaughn & Hansen ex Kudryavtsev) Novak & Zsolt (1961) Saccharomyces inconspicuus van der Walt (1965a) Torulaspora inconspicua (van der Walt) van der Walt & E. Johannsen (1975a) Saccharomyces uafer van der Walt (1965a) Torulaspora uafer (van der Walt) van der Walt & E. Johannsen (1975a) Torulaspora benedictae Capriotti (1969) Saccharomyces saitoanus van der Walt (1970c) Saccharomyces microellipsodes Osterwalder var. osmophilus van der Walt (1970c) Saccharomyces florenzani Balloni, Materassi & Margheri (1971) Torulopsis taboadae Ulloa & Herrera (1978)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ellipsoidal, (2.15.6)X(3.0-6.6) |im, and single or occasionally in pairs. Growth is butyrous, dull-glistening and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass may show a few chains of somewhat elongated cells, but there are no pseudohyphae or true hyphae. Aerobic growth is white to tannish-white, smooth, moderately glistening, and butyrous. Colonies are low convex with a depressed center and a smooth margin. A faint acidic odor is present. Formation of ascospores: Asci are persistent and often conjugated. Conjugation may be between a cell and its bud or between independent cells. In addition, cells with tapered protuberances that resemble conjugation tubes are often present. Asci form one to four spheroidal ascospores that often appear faintly roughened under the light microscope (Fig. 184). Ascospores were observed on YM, 5% malt extract.

Fig. 184. T delbrueckii, CBS 4865. Asci with ascospores, after 3 weeks on RG agar at 15°C. Bar = 5 jim.

corn meal, McClary's acetate and RG agars after 5-30 days at 15 or 25"C. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V V V s V V V V -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate Cadaverine 10% NaCl/5% glucose

+ +

Starch formation Gelatin liquefaction 0.01% Cycloheximide Growth at 2>TC

Co-Q: 6, CBS 1146, and numerous other strains (Yamada et al. 1976b). Mol% G + C: 4 2 . 7 ^ 3 . 9 , CBS 1146, and numerous other strains, {T^\ Nakase and Komagata 1971e); 4 3 . 4 ^ 3 . 9 (BD: Price et al. 1978).

Origin of the strains studied: Cucumber brine, North Carolina, U.S.A. (5); fermented sausages, U.S.A. (2); food processing plant, U.S.A. (1); ragi, Indonesia (2); sugar mill (1); sorghum brandy (1); type strain of Torulopsis taboadae, wine, Mexico; pickled herring, U.S.A. (1); grape juice (1); spoiled beer (1); insect frass, U.S.A. (2); soil, U.S.A. (2), Ghana (1); slime flux, oak (Quercus sp.), U.S.A. (1); rotted tree stumps, eastern U.S.A. (3); unknown (4). Type strain: CBS 1146 (NRRL Y-866), neotype designated by van der Walt (1970d). Comments: Strains of T. delbrueckii show considerable variation in their abilities to ferment and to assimilate carbon compounds, which has contributed to the uncertain circumscription of this species and has resulted in the description of numerous taxa that are now regarded to be synonyms. Price et al. (1978) determined the extent of nDNA complementarity among many of the described species of Torulaspora and demonstrated that such long recognized species as T rosei, T fermentati, and T uafer are conspecific with T delbrueckii. However, not all of the taxa listed as synonyms have been subjected to nDNA comparisons.

Vb. Descriptions of teleomorphic ascomycetous genera and species

406

51.2. Torulaspora globosa (Klocker) van der Walt & E. Johannsen (1975a) Synonyms: Debaryomyces globosus Klocker (1909a) Zymodebaryomyces globosus (Klocker) Novak & Zsolt (1961) Saccharomyces kloeckerianus van der Walt (1971)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ovoidal, (3.2-6.6)x(3.36.6) (im, and single or in pairs. Growth is butyrous, dullglistening, and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is white to tannish-white, smooth, moderately glistening, and butyrous. Colonies are low convex with a depressed center and an entire to lobed margin. A faintly acidic odor is present. Formation of ascospores: Asci are persistent and usually form following conjugation between individual cells, or less often between a cell and its bud. Cells bearing protuberances are often present. Asci form one or two spheroidal ascospores that often appear faintly roughened when viewed with the light microscope (Fig. 185). Yarrow (1984c) reported the presence of mating types. Ascospores were observed on YM and RG agars after 5-10 days at either 15 or 25''C. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+/w -

+ + v + V -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol -D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ v -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w/+ +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate Cadaverine 10% NaCl/5% glucose

+ v

Starch formation Gelatin liquefaction 0.01% Cycloheximide 0.1% Cycloheximide Growth at 3 7 T

+/w

Co-Q: 6, CBS 764, and 4 additional strains (Yamada et al. 1976b). Mol% G + C: 47.5, CBS 764; 47.0, CBS 5380 (BD: Price et al. 1978).

Origin of the strains studied: Soil, West Indies (1), New Guinea (1), unknown (2). Complementary mating types: CBS 5500 and CBS 5503. Type strain: CBS 764 (NRRL Y-12650), from soil, West Indies.

e Fig. 185. T. globosa, CBS 5380. Conjugated ascus with ascospores, after 7 days on RG agar at 25''C. Bar = 5 ^im.

51.3. Torulaspora pretoriensis (van der Walt & Tscheuschner) van der Walt & E. Johannsen (1975a) Synonyms: Saccharomyces pretoriensis van der Walt & Tscheuschner (1956c) Torulaspora franciscae Capriotti (1958a) Debaryomyces franciscae (Capriotti) K. Kodama, Kyono, Naganishi & Takahara (1964b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to short ellipsoidal, (2.5-5.l)x(3.0-6.6) [im, and single or in pairs. Growth is butyrous, dull-glistening, and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows infrequent, poorly differentiated pseudohyphae, but no true hyphae. Aerobic growth is white to tannish-white, smooth, moderately glistening, and butyrous. Colonies are low convex with a depressed center and an entire to lobed margin. A faintly acidic odor is present. Formation of ascospores: Asci are persistent and usually form following conjugation between a cell and its bud. Each ascus forms one to four spheroidal ascospores that may be roughened or smooth (Fig. 186).

51. Torulaspora Lindner / C.P. Kurtzman

407

Comments on the genus As shown by the long lists of synonyms for some species, use of phenotypic characters to separate the genera Torulaspora, Saccharomyces, Zygosaccharomyces and Debaryomyces has given uncertain results. In the 1970 edition of The Yeasts, A Taxonomic Study, Debaryomyces was maintained, but species of Torulaspora and Zygosaccharomyces were assigned to Saccharomyces. In 1975, van der Walt and Johannsen revived Torulaspora and enlarged it with the transfer of all Debaryomyces species and further included species of Pichia with spheroidal ascospores. With the 1984 edition of The Yeasts, all four genera were again recognized. Distinguishing characters included the following: Fig. 186. T. pretoriensis, CBS 2926. Conjugated asci with ascospores, Debaryomyces - Cells are predominately haploid with after 3 months on YM agar at S^C. Bar = 5 |im. ascosporulation usually preceded by conjugation between independent cells or between a cell and its bud; ascospores Ascospores were observed on YM agar, often following are roughened; fermentation is absent or usually not refrigeration (ca. 5°C) for one to several months. vigorous; coenzyme Q-9. Saccharomyces - Cells of some species are predomFermentation: inantly diploid, others are haploid; conjugation may Glucose + Lactose Galactose not immediately precede ascosporulation; ascospores are +/w Raffinose Sucrose + Trehalose smooth; fermentation is vigorous; coenzyme Q-6. Maltose + Torulaspora - Cells are predominantly haploid with ascosporulation usually preceded by conjugation between Assimilation: Glucose + /^-Acetyl-D-glucosamine independent cells or between a cell and its bud; ascospores Galactose + Methanol are usually roughened; fermentation is vigorous; coenL-Sorbose Ethanol +/w zyme Q-6. Sucrose + Glycerol v Zygosaccharomyces - Cells are predominantly haploid Maltose + Erythritol Cellobiose Ribitol with ascosporulation usually preceded by conjugation Trehalose + Galactitol between independent cells, often with each conjugant proLactose D-Mannitol + ducing ascospores; ascospores are smooth; fermentation is Melibiose D-Glucitol V vigorous; coenzyme Q-6. + a-Methyl-D-glucoside + Raffinose V Salicin Melezitose Examination of ascospores by transmission electron + D-Gluconate v Inulin microscopy (Kawakami 1958, Kodama et al. 1964a-c, Soluble starch - ' DL-Lactate + Kreger-van Rij 1969c, Kreger-van Rij and Veenhuis D-Xylose Succinate 1976b) and scanning electron microscopy (Kurtzman L-Arabinose Citrate et al. 1972, 1975) demonstrated some differences in D-Arabinose Inositol D-Ribose Hexadecane the patterns of wall ornamentation among rough-spored L-Rhamnose Nitrate species, but did not provide a clear separation of genera. D-Glucosamine Vitamin-free + Furthermore, one strain of Torulaspora pretoriensis had Additional assimilation tests and other growth rough ascospores whereas spores of the type strain were characteristics: smooth. Strains of the other two species of Torulaspora 2-Keto-D-gluconate Starch formation always formed roughened ascospores. 5-Keto-D-gluconate Gelatin liquefaction Biochemical comparisons, such as the formation of Saccharate 0.01% Cycloheximide intracellular (3-glucosidases (Fiol 1973) and nitrate reducCadaverine Growth at 37T tase (Fiol and Billon-Grand 1977), did not clearly resolve w/10% NaCl/5% glucose genera. The type of coenzyme Q synthesized provided Co-Q: 6, CBS 2926 (Yamada et al. 1976b). Mol% G + C: 45.6, CBS 2926 (7^: Nakase and Komagata 1971e); 46.4, some correlation with genus circumscriptions (Yamada CBS 2187; 46.3, CBS 2926 (BD: Price et al. 1978). et al. 1976b). Species of Debaryomyces have Q-9, whereas Saccharomyces, Torulaspora and Zygosaccharomyces are Origin of the strains studied: CBS 2187 (NRRL characterized by Q-6. Y-17251), from soil, South Africa; CBS 2926 (NRRL Ribosomal RNA/rDNA sequence comparisons have Y-17532), type strain of Torulaspora franciscae, from soil, had the most significant impact on resolving intraSpain. and interspecific relationships among the four genera Type strain: CBS 2187.

408

Vb. Descriptions of teleomorphic ascomycetous genera and species

(Kurtzman and Robnett 1991, Yamadaetal. 1991b, James taxon. Although there appears to be poor separation et al. 1994b, 1996, 1997). From what is presently known, between Saccharomyces and Zygosaccharomyces (James DeZjaryomjce^ is phylogenetically separate from the other et al. 1997, Kurtzman and Robnett, unpublished data), three genera. Torulaspora species arise from within Zygo- the present four genera have been retained until further saccharomyces, suggesting Torulaspora to be an artificial analyses can be made.

52. Wickerhamia Soneda / H.J. Phaff and M. W. Miller

409

52. Wickerhamia Soneda H.J. Phaff and M.W. Miller Diagnosis of the genus Cells are ovoidal to elongate or apiculate, single, in pairs or very short chains, reproducing mainly by bipolar budding on a relatively broad base. Asci are formed without prior conjugation. Ascospores are cap-shaped; the crown deflects to one side of a sinuous brim, giving the appearance of a sporting cap; usually only one or two spores form per ascus but occasionally there may be many (up to 16 have been reported); the asci rupture when the spores are mature. Sugars are fermented; nitrate is not assimilated; biotin is the only vitamin required for growth. In liquid media a sediment and a ring are formed. Diazonium blue B reaction is negative. Type species WickerhamiafluorescensSoneda Species accepted 1. WickerhamiafluorescensSoneda (1960) Systematic discussion of the species 52.1. WickerhamiafluorescensSoneda (1960) Anamorph: KloeckerafluorescensSoneda Synonym: KloeckerafluorescensSoneda (1959)

Dalmau plate culture on potato agar: domycelium is not formed.

Pseu-

Formation of ascospores: Spores are formed without immediately preceding conjugation of vegetative cells. The ascospores resemble a sporting cap; the crown is deflected to one side of a sinuous brim, and they contain a single, conspicuous refractile lipid globule (Fig. 188). In our study only one and rarely two spores per ascus have been observed, although Soneda (1960) reported up to 16 per ascus. Upon maturity, asci rupture along an equatorial plane, releasing the spores. Sporulation is best on corn meal agar, oatmeal agar, or potato agar at 25''C, after 3 to 5 days.

Growth in 5% malt extract: After two or three days at 25''C, cells are apiculate with blunt ends, ovoidal, elongate (sometimes sausage-shaped or slightly curved), or in the shape of bowling pins, (4-7) x (8-15-22) |im. They occur singly, in pairs, and occasionally in groups of three; reproduction is by bipolar budding on a broad base (Fig. 187); a sediment and a thin ring begin to form. After 3-4 weeks there are a sediment, ring and sometimes a few islets, but no pellicle. Growth on 10% malt agar: After 3 ^ weeks the streak culture is gray to slightly yellowish, smooth, Fermentation: Glucose semiglossy, texture pasty, cross section low convex to flat, Galactose margin entire. The medium may become yellowish due to Sucrose excretion of riboflavin, which shows strong fluorescence Maltose under ultraviolet light.

+ + +

-

Lactose Raffinose Trehalose Melibiose

",vv^^

r*4

4^

§ * < #/

Fig. 187. Wfluorescens, CBS 4565. Cells grown on 5% malt extract for 6 days. Bar = 20|im.

*

c\

Fig. 188. W fluorescens, CBS 4565. Ascus showing typical equatorial rupture. Arrow indicates liberated ascospore. Bar= 10 [im.

410

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Vb. Descriptions of teleomorphic ascomycetous genera and species

+ +

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+

-

+ +

+ w w + + + Additional assimilation tests and other g ro\ characteristics:

2-Keto-D-gluconate Acid production + + 5-Keto-D-gluconate Urease Cadaverine + Lipase L-Lysine + Gelatin hydrolysis Ethylamine + Casein hydrolysis Nitrite Cycloheximide lOO^xg/ml + 50% Glucose + Growth at 30T + 12.5% NaCl/5% glucose + Growth at 37°C Starch synthesis Co-Q: 9, IFO 1116 (CBS 4565) (Yamada et al. 1976a). MoI%G + C: 37.6, one strain {T^ : Nakase and Komagata 1971g).

Origin of the strain studied: CBS 4565, isolated by Soneda (1959) from dung of a wild squirrel in Japan. Type strain: CBS 4565 (IFO 1116). Comments on the genus Mitotic division of the rather large nucleus of W. fluorescens under phase contrast and in stained preparations has been followed in detail by Matile et al. (1969). Meiosis and ascospore delimitation were studied by Rooney and Moens (1973a,b) with the use of electron microscopy of ultrathin sections. The nuclear behavior is similar to that occurring in Saccharomyces cerevisiae in that the nuclear envelope remains intact during the two meiotic divisions and a four-lobed nucleus is formed. One of the four nuclear lobes has a complex spindle-pole body, which is the site from where the prospore wall develops that eventually surrounds the ascospore nucleus and associated cytoplasm. With few exceptions (two-spored asci) the three remaining nuclei degenerate. The outer membrane of the prospore wall forms a fold, or brim, on the outside of the spore, ultimately resulting in an asymmetric capshaped spore. Because in the above-cited work and in our own laboratory multispored asci were never observed, it is possible that Soneda's (1960) observation of multispored asci was based on viewing clumps or aggregates of numerous liberated spores.

53. Wickerhamiella van der Walt / C.P. Kurtzman

411

53. Wickerhamiella van der Walt C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on either a narrow or a broad base, and the cells range from spheroidal to ellipsoidal. Neither hyphae nor pseudohyphae are produced. Pellicles are not formed on liquid media. Asci are conjugated and usually form a single, roughened, asymmetrical elongated ascospore. Asci become deliquescent at the terminus, and following ascospore release, become somewhat corrugated in appearance. Sugars are not fermented. Nitrate is assimilated. Diazonium blue B reaction is negative. Type species Wickerhamiella domercqiae van der Walt Species accepted 1. Wickerhamiella domercqiae van der Walt (1973) Systematic discussion of the species

the lower end of the size range given, whereas CBS 4733 has noticeably larger cells. Growth is butyrous and light 53.1. Wickerhamiella domercqiae van der Walt (van tannish-white in color. der Walt and Liebenberg 1973a) Anamorph: Candida domercqiae (van der Walt & van Kerken) S.A. Meyer & Yarrow Synonyms: Torulopsis domercqiae (as T. domercqii) van der Walt & van Kerken (1960) Candida domercqiae (van der Walt & van Kerken) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Torulopsis saccharum Shehata (1960) nom. nud.

Grow^th on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ellipsoidal, (1.23.5)x(1.4-3.5)|im, and single, in pairs or in small clusters. CBS 4351 has quite small cells that tend to be at ^fe#^

i«r^

Q

'€?

:0

fv

Fig. 189. W. domercqiae, CBS 4733. Vegetative cells and an ascus with a single ascospore (arrow), after two weeks on PDA, 15*^0. A cluster of four free ascospores is located on the left of the photomicrograph. Bar = 5^m. Inset. An enlarged view of an ascus with an ascospore. Bar=l |im.

Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, neither hyphae nor pseudohyphae are seen under the coverglass. Aerobic growth is tannish-white, glistening and butyrous. Colonies are somewhat raised but with a depressed center, and have smooth to finely lobed margins. Formation of ascospores: Asci are conjugated and each produces a single elongated spore which is released at maturity (Fig. 189). Because of the small size of cells and spores, van der Walt and Liebenberg (1973a) examined the process of ascosporulation by transmission electron microscopy. They demonstrated that asci arise from conjugation between independent cells rather than from parent cell-bud conjugation. The elongated ascospores were shown to be somewhat roughened and irregular in shape. Following dissolution of a terminal portion of the ascus wall, van der Walt and Liebenberg (1973a) stated that the spores are ejected. Empty asci often have a corrugated appearance. Heat treatment of sporulating cultures gave only sporogenous colonies, thus indicating the species to be homothallic. Ascospores were observed in PDA cultures of CBS 4733 after two weeks at 15°C. Sporulation was not detected in CBS 4351, the type strain. Fermentation: absent.

412

Vb. Descriptions of teleomorphic ascomycetous genera and species

Assimilation: A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/w s s s s + w + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

+ s

Starch formation Gelatin liquefaction Growth at 37°C

Co-Q: Not determined. Mol% G + C: 48.6, CBS 4351 (BD, T^: Stenderup et al. 1972).

Origin of the strains studied: NRRL Y-6692 (CBS 4351), type strain of Torulopsis domercqiae, from a wine vat, South Africa; NRRL Y-6698 (CBS 4733), type strain of Torulopsis saccharum, effluent from a sugar cane factory. Type strain: CBS 4351, isolated by van der Walt and van Kerken from the surface of a wine vat. South Africa. Comments on the genus Wickerhamiella has been isolated only rarely and forms vegetative cells that are among the smallest known for yeasts. The genus is also unique by virtue of its ascospores which have an elongated, irregular shape with a roughened surface.

54. Williopsis Zender / C.P. Kurtzman

413

54. Williopsis Zender C.P. Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Cells are spheroidal, ovoidal or occasionally elongate. True hyphae are not produced, but pseudohyphae may form. Pellicles are formed on the surface of liquid media by some species. Asci may be unconjugated or there may be conjugation between a cell and its bud or between independent cells. Asci, which may be either persistent or deliquescent, form 1-4 saturnoid ascospores. Glucose is fermented. D-xylose is assimilated. Diazonium blue B reaction is negative. Type species Williopsis saturnus (Klocker) Zender Species accepted 1. 2. 3. 4. 5.

Williopsis californica (Lodder) von Arx (1977) Williopsis mucosa (Wickerham & Kurtzman) Kurtzman (1991) Williopsis pratensis Bab'eva & Reshetova (1979) Williopsis salicorniae Hinzelin, Kurtzman & M.Th. Smith (1991) Williopsis saturnus (Klocker) Zender (1925) a. Williopsis saturnus (Klocker) Zender var. saturnus (1991) b. Williopsis saturnus var. mrakii (Wickerham) Kurtzman (1991) c. Williopsis saturnus var. sargentensis (Wickerham & Kurtzman) Kurtzman (1991) d. Williopsis saturnus var. suaueolens (Klocker) Kurtzman (1991) e. Williopsis saturnus var. subsufficiens (Wickerham) Kurtzman (1991)

Key to species See Table 44. 1. 2(1). 3(2). 4(3). 5(3). 6(5). 7(6). 8(7). 9(5).

a b a b a b a b. a b a b a b a b a b

Cellobiose assimilated -^ 2 Cellobiose not assimilated Galactose assimilated Galactose not assimilated -^ 3 L-Sorbose assimilated -^ 4 L-Sorbose not assimilated -^ 5 Melezitose assimilated Melezitose not assimilated Sucrose assimilated -^ 6 Sucrose not assimilated —> 9 Growth in vitamin-free medium -^ 7 Absence of growth in vitamin-free medium Maltose assimilated Maltose not assimilated —» 8 L-Rhamnose assimilated L-Rhamnose not assimilated Growth in vitamin-free medium Absence of growth in vitamin-free medium

Systematic discussion of the species 54.1. Williopsis californica (Lodder) von Arx (von Arx et al. 1977) Synonyms: Zygohansenula californica Lodder (1932) Hansenula californica (Lodder) Wickerham (1951) Zygowilliopsis californicus (Lodder) Kudryavtsev (1960) Hansenula californica (Lodder) Wickerham var. maltosa Capriotti (1959) nom. nud. Endomycopsis fukushimae Soneda (1962)

W. salicorniae: W. pratensis:

p. 416 p. 415

W. mucosa: W. californica:

p. 415 p. 413

W. saturnus var. subsufficiens: W. saturnus var. saturnus:

p. 417 p. 416

W. saturnus var. saturnus: W. saturnus var. suaueolens: W. saturnus var. mrakii: W. saturnus var. sargentensis:

p. p. p. p.

416 417 417 417

Pichia saturnospora Soneda (1962) Hansenula dimennae Wickerham (1969b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.46.2)x(3.0-8.1)|im, and single or in pairs. Growth is butyrous and gray-white in color. Growth on the surface of assimilation media: Thin pellicles, or rarely, no pellicles. Dalmau plate culture on morphology agar:

After

Vb. Descriptions of teleomorphic ascomycetous genera and species

414

Table 44 Key characters of species in the genus Williopsis

Fermentation^ I

Species/variety

Assimilation^

Glu

Su

Raf

Gal

LSor

Williopsis californica

+

-

-

V

+

-

+

W. mucosa

+

+

+

-

W. pratensis

+

w

W. salicorniae

+

-

W. saturnus var. saturnus ^

+

+

+/w

W. saturnus var. mrakii

+

W. saturnus var. sargentensis

+

-

-

W. saturnus var. suaveolens ^

+

+

+/w

W. saturnus var. subsufficiens

+

+

+

-

Su

Vfree^

Cel

Mel

V

+

-

+

+

+

Mai

LRham

N03

V

+

-

+

+

+

+

+

-

-

-

-

-

+

V

+

V

V

+

-

-

+

-

V

+

+

+

-

-

-

+

+

+

+

-

+ +

+ + +

+

^ Abbreviations: Glu, glucose; Su, sucrose; Raf, raffinose; Gal, galactose; LSor, L-sorbose; Mai, maltose; Cel, cellobiose; Mel, melezitose; LRham, L-rhamnose; NO3, nitrate. ^ Growth in vitamin-free medium. ^ Separation of W saturnus var. saturnus and W saturnus var. suaveolens is based on the following assimilation reactions on maltose and L-rhamnose: var. saturnus, maltose -/L-rhamnose + or maltose +/L-rhamnose v; var. suaveolens, maltose -/L-rhamnose - .

7 days at 25*^0, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is white to grayish-white, moderately gUstening, and butyrous. Colony margins arefinelylobed. Formation of ascospores: Conjugation occurs between cells and their buds, between independent cells, or rarely asci are unconjugated. Asci contain one to four elongated saturn-shaped ascospores which become moderately refi-actile upon release from their deliquescent asci (Fig. 190). Single-ascospore isolates from four-spored asci form sporogenous colonies, thus suggesting the species to be homothallic. Ascospores were observed on 5% malt extract agar after 2 weeks at 25°C.

a^

jf C J0

%

Fig. 190. W californica, CBS 5760. Asci with ascospores, after 4 days on 5% malt extract agar at 25''C. Bar = 5 |im.

Fermentation: Glucose Galactose Sucrose Maltose

+

-

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

V

-

+ V V

+ V

-

+

V

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

-

+

V V

+/w + + + V

-

+

Additional assimilation tests and other growth characteristics: V Starch formation 2-Keto-D-gluconate -

Gelatin liquefaction Growth at 3 7 ^

w/-

-

Co-Q: 7 (Yamada et al. 1973a). Mol% G + C: 43.9, 44.1, two strains (T^: Nakase and Komagata 1971b); 42.6-43.3, type; and four additional strains (BD: Kurtzman 1991a).

Origin of the strains studied: This species has a worldwide distribution: soil, Australia (2), Belgium (1), Canada (1), India (1), New Zealand (4), U.S.A. (13); streams and lakes, U.S.A. (2); frass from the momi fir

54. Williopsis Zender / C.P. Kurtzman

{Abies firma Sieb & Zucc), Japan (1), European beech (Fagus silvaticus L.), Sweden (1), mountain ash (Sorbus americana L.), U.S.A. (1), elm (Ulmus sp.), U.S.A. (1); flux of the koa acacia (Acacia koa Gray), U.S.A. (1); shrimp, U.S.A. (1); bear {Ursus actos yesoensis) dung, Japan (2); ox dung, France (1); unknown (2). Type strain: CBS 252 (NRRL Y-17395), isolated by KM. Muller in California, U.S.A., from an enrichment culture of Azotobacter. The original description of the species was based on this strain. CBS 5760 (NRRL Y-1680), isolated from soil, Murray Bridge, South Australia, was considered by Wickerham (1951) as the most typical strain of the species and came to be regarded by some as the type strain. Comments: The taxa designated Hansenula dimennae, Pichia saturnospora and Endomycopsis fukushimae were reported by Kurtzman (1991a) to show 94-100% nuclear DNA relatedness with W. californica and, therefore, represent synonyms of this latter species. H. dimennae had been separated from W. californica because of its failure to assimilate sucrose. 54.2. Williopsis mucosa (Wickerham & Kurtzman) Kurtzman (1991a) Synonyms: Pichia mucosa Wickerham & Kurtzman (1971) Waltiozyma mucosa (Wickerham & Kurtzman) Muller & Kock (1986)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to mostly ellipsoidal, (2.55.l)x(4.5-8.0) [im, and occur singly or in pairs. Growth is tannish-white in color and mucoid. Growth on the surface of assimilation media: Dry climbing pellicles are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows pseudohyphae to be common and highly branched. True hyphae are not present. Aerobic growth is raised, highly glistening, mucoid, gray-white in color and with an entire margin. Formation of ascospores: Asci are unconjugated and persistent and each contains one or two spores. The spores are spheroidal to occasionally slightly ellipsoidal and have a thick equatorial ring. Colonies from single-ascospore isolates are sporogenous, but since four-spored asci were not available for testing, it is not certain that this species is homothallic. Ascospores were observed on 5% malt extract- and YM agars after 1 week at 2 5 T .

Fermentation:

Glucose Galactose Sucrose Maltose

+

-

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

415

+

-

+ + + + +

-

+

-

+

-

V

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+/w + + +/w

-

V

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 2)TC 10% NaCl/5% glucose v Co-Q: 7 (Y. Yamada, personal communication). Mol% G + C: 33.7, 34.3, two strains (BD: Kurtzman 1991a).

-

Origin of the strains studied: Soil, South Africa (1), U.S.A. (1). Type strain: CBS 6341 (NRRL YB-1344), from soil, Illinois, U.S.A. Comments: As discussed under Comments on the genus, W. mucosa was transferred to Williopsis from Pichia because of the overall similarity of its rRNA nucleotide sequences to other members of the genus (Liu and Kurtzman 1991). W. mucosa is unique among the saturnspored yeasts because it produces substantial amounts of an extracellular polysaccharide. The polysaccharide is neutral and the only sugar present is D-mannose (Seymour et al. 1976). W. mucosa was assigned to the newly described genus Waltiozyma by Muller and Kock (1986) on the basis of apparent uniqueness in cellular fatty acid composition and because it was believed to produce coenzyme Q-6 (BillonGrand 1985), in contrast to Q-7 that is produced by other Williopsis spp., as well as by Saturnispora spp. Y. Yamada (personal communication) reexamined W mucosa and reported that both known strains are characterized by coenzyme Q-7. 54.3. Williopsis pratensis Bab'eva & Reshetova (1979) Synonym: Komagataea pratensis (Bab'eva & Reshetova) Y. Yamada, Matsuda, Maeda, Sakakibara & Mikata (1994b)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to short ellipsoidal, (2.8-6.0)x(3.0-7.3)|im, and single, in pairs, or in small clusters. Growth is butyrous and tannish-white in color.

416

Vb. Descriptions of teleomorphic ascomycetous genera and species

Growth on the surface of assimilation media: Pellicles are not formed but thin films and rings may occur. Dalmau plate culture on morphology agar: After 7 days at 25^C, growth under the coverglass shows neither pseudohyphae nor true hyphae. Aerobic growth is white, dull-glistening, finely striated and butyrous. Colony margins are irregular. Formation of ascospores: Ascospores were not observed in the present study. Bab'eva and Reshetova (1979) reported the formation of unconjugated, persistent asci having one or two spheroidal spores with ledges. Fermentation: Glucose Galactose Sucrose Maltose

+ w -

Lactose Raffinose Trehalose

+ + + + + + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

+ -

Starch formation Gelatin liquefaction Growth at 37°C

Co-Q: Not determined. Mol% G + C: 39.9, CBS 7079 (BD: Kurtzman 1991a).

Origin of the strains studied: Soil from a meadow, Russia (2). Type strain: CBS 7079 (NRRL Y-12696), from meadow soil, Russia. 54.4. Williopsis salicorniae Hinzelin, Kurtzman & M.Th. Smith (1991) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (3.06.5)x(3.0-8.0)jim, and single, in pairs, or in small clusters. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After

7 days at 25''C, growth under the coverglass shows neither pseudohyphae nor true hyphae, but "tree-like" outgrowths of undifferentiated cells occur infrequently. Aerobic growth is tannish-white, dull-glistening, and butyrous. Colony margins are irregular. Formation of ascospores: Asci are unconjugated, persistent, and form one to four globose to subglobose spores having a thin equatorial ledge. Ascospores were observed on 5% malt extract agar after 3-4 weeks at 25T. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi-ee

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + s + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 36.7, CBS

-

Starch formation Gelatin liquefaction Growth at 2)TC

-

8071 (BD: Hinzelin et al. 1991).

Origin of the strain studied: Brackish water, France. Type strain: CBS 8071 (NRRL Y-12834), isolated from the brackish water of a salt spring near ChateauSalins, France. 54.5. Williopsis satumus (Klocker) Zender (1925b) This species has five varieties: Williopsis satumus (Klocker) Zender var. satumus (1991) Synonyms: Saccharomyces satumus Klocker (1902) Willia saturnus (Klocker) Hansen (1904) Hansenula saturnus (Klocker) H. & P. Sydow (1919) Hansenula beijerinckii van der Walt (1957) Williopsis beijerinckii (van der Walt) Naumov & Vustin (Naumov et al. 1981) Hansenula coprophila Soneda (1959)

54. Williopsis Zender / C.P. Kurtzman

Williopsis saturnus var. mrakii (Wickerham) Kurtzman (1991a)

0

Synonyms: Hansenula mrakii Wickerham (1951) Williopsis mrakii (Wickerham) Naumov & Vustin (Naumov et al. 1981)

417

o o €)

Williopsis saturnus var. sargentensis (Wickerham & Kurtzman) Kurtzman (1991a) Synonyms: Pichia sargentensis Wickerham & Kurtzman (1971) Williopsis sargentensis (Wickerham & Kurtzman) Naumov (1987a)

Williopsis saturnus var. suaveolens (Klocker) Kurtzman (1991a) Synonyms: Pichia suaveolens Klocker (1912a) Hansenula suaveolens (Klocker) Dekker (Stelling-Dekker 1931) Williopsis suaveolens (Klocker) Naumov, Vustin & Bab'eva (Naumov et al. 1985a)

Williopsis saturnus var. subsufficiens (Wickerham) Kurtzman (1991a) Synonyms: Hansenula saturnus (Klocker) H. & P. Sydow var. subsufficiens Wickerham (1969b) Williopsis subsufficiens (Wickerham) Vustin, Naumov & Bab'eva (Vustin et al. 1982)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal, ellipsoidal, or occasionally elongate, (2.5-5.2)x(3.5-8.5)|im, and occur singly, in pairs, or small clusters. Growth is butyrous and tannishwhite in color. Growth on the surface of assimilation media: Pellicles vary from thin and smooth to thick and folded, and may reach a height of 20 mm above the surface of the medium. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows only occasional primitive pseudohyphae. True hyphae are not produced. Aerobic growth is tannish-white, smooth, dull, and butyrous. Colony margins may be entire or finely lobed. Formation of ascospores: Asci are generally unconjugated but occasionally conjugation between independent cells is observed. One to four saturn-shaped ascospores are formed per ascus (Fig. 191). The thickness of the rings on the spores varies, and spores from one strain may even lack rings (Wickerham 1970a). Asci are persistent. Singlespore isolates form sporogenous colonies indicating the species to be homothallic. Ascospores were observed on 5% malt extract agar and on YM agar after 2 weeks at 25°C. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

+/w

JOdt Fig. 191. W saturnus var. saturnus, CBS 5761. Asci with ascospores after 4 days on YM agar at 25''C. Bar = 5 |im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ V

+ V

-

+ V V

-

+

V

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

V V V V

+ + + V

-

+

4Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate Gelatin liquefaction w/5-Keto-D-gluconate Saccharate Growth at 37°C V -

10% NaCl/5% glucose Co-Q: 7, varieties saturnus, subsufficiens, mrakii (Yamada et al. 1973a). Mol% G + C: variety saturnus, 42A-A3.7, three strains (T^), 44.344.6, five strains (BD); variety mrakii, 42.0, one strain (T^), 44.3, two strains (BD); variety sargentensis, 44.1, one strain (BD); variety suaveolens, 44.5, 44.7, two strains (BD); variety subsufficiens, 42.9, 43.2, two strains (T^), 43.5, 43.7, two strains (BD) (T^: Nakase and Komagata 1971b; BD: Kurtzman 1991a).

Supplementary description of W saturnus varieties: Variety mrakii: sucrose is neither fermented nor assimilated. Variety sargentensis: sucrose is neither fermented nor assimilated, nitrate is not assimilated, an exogenous supply of vitamins is required for growth. Variety suaveolens: neither maltose nor L-rhamnose are assimilated, whereas for the variety saturnus, one or both of these sugars are assimilated.

418

Vb. Descriptions of teleomorphic ascomycetous genera and species

Variety subsufficiens: sucrose is fermented and assimilated but an exogenous supply of vitamins is required for growth. Origin of the strains belonging to the variety saturnus: The taxon has been isolated worldwide from the following: soil, Egypt (1), Liberia (6), New Zealand (1), South Africa (2), U.S.A. (21); streams, lakes, bogs, U.S.A. (10); leaf litter, Japan (1), U.S.A. (1); tree frass, U.S.A. (3); vegetables, Japan (1); elephant dung, Japan (1); unknown (7). Type strain: CBS 254 (NRPIL Y-17396), believed to be Klocker's original isolate from soil, Himalayas, and obtained through Winge. Wickerham (1951) considered CBS 5761 (NRRL Y-1304) to be a typical strain, and this inadvertently came to be regarded as the type strain. Origin of the strains belonging to the variety mrakii: Soil, India (1), New Guinea (1); swamp water, Wyoming, U.S.A. (1); water from a hot spring, California, U.S.A. (1). Type strain: CBS 1707 (NRRL Y-1364), isolated from soil in New Guinea. Origin of the strain belonging to the variety sargentensis: Outlet of a small lake at Camp Sargent near Peterborough, New Hampshire, U.S.A. Type strain: CBS 6342 (NRRL YB-4139). Origin of the strains belonging to the variety suaveolens: Soil, Canada (1), Denmark (1), New Zealand (2), U.S.A. (3); ponds and streams, U.S.A. (6); unknown (2). Type strain: CBS 255 (NRRL Y-17391), Klocker's culture from soil, Denmark. Origin of the strains belonging to the variety subsufficiens: Soil, Liberia (2), Illinois, U.S.A. (1). Type strain: CBS 5763 (NRRL YB-1657), from soil, Liberia.

leading to the interpretation that all four taxa represent biologically separate sibling species (Naumov 1987a). However, in earlier work, Naumov et al. (1985a) suggested that W. (Zygowilliopsis) californica and its suspected synonyms Endomycopsis fukushimae and Pichia saturnospora were conspecific on the basis of crosses that yielded progeny viabilities much like those found among the W. saturnus complex. Kurtzman (1991a) addressed the taxonomy of the W. saturnus complex from the perspective of nuclear DNA relatedness. DNA complementarity ranged from 3 6 72%. Thus, as with the foregoing genetic crosses, the extent of DNA relatedness approaches that of separate species in some cases, but is nonetheless, greater than previously seen among many closely related sibling species (Kurtzman 1987b). Because of the uncertainties expressed about genetic isolation among the strains, all taxa showing intermediate DNA relatedness have been defined as varieties of W. saturnus. This approach also serves to emphasize their close genetic relatedness in a way not possible if some of the taxa are designated as separate species. Consistent with this treatment is the similarity of rRNA nucleotide sequences exhibited by members of the group (Liu and Kurtzman 1991). W. saturnus var. sargentensis was earlier classified as Pichia sargentensis (Wickerham and Kurtzman 1971). The relatively high DNA relatedness (68%) detected between this taxon and W. saturnus var. mrakii (Kurtzman 1991a) fiirther argues that ability to assimilate nitrate as a sole source of nitrogen offers little taxonomic resolution, an observation in keeping with other work (Kurtzman 1984a). Comments on the genus

The genus Williopsis, as defined by Zender (1925b), Comments: W saturnus and the four taxa designated was based mainly on the formation of saturn-shaped as its varieties in this treatment have had a long and ascospores by the species assigned to it rather than on varied taxonomic history. Wickerham (1969a) attempted ability to assimilate nitrate as a sole source of nitrogen to address the issue of species delimitation in the as later became the basis for separating Hansenula and W saturnus complex by measuring the fertility of Pichia (Stelling-Dekker 1931). More recent taxonomic intertaxon pairings. Hybrids were obtained between the treatments have discarded use of Williopsis (Wickerham following pairs: Hansenula californica and H. dimennae; 1951, Lodder and Kreger-van Rij 1952, Lodder 1970, H. mrakii and H. beijerinckii; H. saturnus var. saturnus Kreger-van Rij 1984a) in favor of assigning nitrateand H. beijerinckii', and H. saturnus var. subsufficiens and assimilating species to Hansenula and placing in Pichia H. beijerinckii. Hybrids showed reduced sporulation and those species that do not assimilate nitrate. Von Arx et al. a greater proportion of poorly formed ascospores, but the (1977) revived the use of Williopsis but seem to have analysis was complicated by the finding that hybrids failed restricted species assignment to those saturn-spored taxa that were formerly placed in Hansenula. to form in certain intraspecific pairings. Naumov (1987a) has argued for retention of W. califorNaumov and colleagues (Naumov et al. 1985a, Naumov 1987a) extended Wickerham's genetic studies by using nica in Zygowilliopsis as proposed earlier when the genus auxotrophic mutants, which allowed hybridizations to was described by Kudryavtsev (1960). Wickerham (1951) be followed more accurately, and by analysis of any examined the species now assigned to Williopsis and resulting single-spore isolates. Crosses of the species pairs pointed out that all form some haploid cells, thus negating W. saturnus var. saturnus x W. beijerinckii, W. saturnus var.the distinction between haploid and diploid species, the saturnus x W. mrakii and W. beijerinckii x W. mrakii yieldedprimary criterion for separation of Zygowilliopsis and hybrids producing ascospores with only 0-A% viability, Williopsis.

54. Williopsis Zender / C.P. Kurtzman

Kurtzman (1991a) measured the extent of nuclear DNA complementarity among saturn-spored taxa assigned to Williopsis and Pichia thus defining species. Because the resolution of this methodology extends only to definition of closely related sibling species (Kurtzman 1987b), Liu and Kurtzman (1991) estimated species relationships from rRNA divergence. Results from these comparisons were rather surprising. The saturn-spored Pichia spp. formed a close cluster that was well-separated from Williopsis, but all five Williopsis spp. were rather widely separated from one another. Because of their genetic isolation, the four Pichia spp. were assigned to the newly described genus Saturnispora (Liu and Kurtzman 1991). The apparent great phylogenetic distance between species of Williopsis raised several possibilities: the taxa represented five monotypic sibling genera, rates of nucleotide substitution were abnormally high causing the genetic distance to appear greater than it is, or that there are numerous taxa

419

missing from the clade. In view of the uncertainty, Liu and Kurtzman (1991) considered the five species to be members of Williopsis. Kurtzman and Robnett (unpublished data) reexamined the phylogeny of Williopsis by including the species in rRNA sequence analyses of Pichia. The genus Pichia separated into six major clades with Williopsis species distributed among several of them. These data demonstrated Williopsis and Pichia to be polyphyletic and therefore artificial genera. Additional work is required before the species can be reassigned to genera that are phylogenetically circumscribed. At present, Williopsis and Saturnispora can be separated on standard growth tests because all species assigned to Williopsis assimilate D-xylose whereas Saturnispora species do not. D-xylose assimilation is regarded as a fortuitous phenotypic marker and not of phylogenetic significance.

420

Vb. Descriptions of teleomorphic ascomycetous genera and species

55. Yarrowia van der Walt & von Arx C.R Kurtzman Diagnosis of the genus Asexual reproduction is by multilateral budding on a narrow base. Arthroconidia may occasionally be formed as well. Budded cells are spheroidal, ellipsoidal, or often elongate. True hyphae and pseudohyphae are formed; true hyphae have septa with a single central micropore. Asci are unconjugated and generally arise from diploid hyphae. The asci, which slowly deliquesce, form 14 ascospores that may be spheroidal, hat-shaped, hemispheroidal, or somewhat angular. Sugars are not fermented. Nitrate is not assimilated. Lipases, proteases, and urease are produced. Coenzyme Q-9 is formed. Diazonium blue B reaction is negative. Type species Yarrowia lipolytica (Wickerham, Kurtzman & Herman) van der Walt & von Arx Species accepted 1. Yarrowia lipolytica (Wickerham, Kurtzman & Herman) van der Wak & von Arx (1980) Systematic discussion of the species 55.1. Yarrowia lipolytica (Wickerham, Kurtzman & Herman) van der Walt & von Arx (1980) Anamorph: Candida lipolytica (F.C. Harrison) Diddens & Lodder Synonyms: Endomycopsis lipolytica Wickerham, Kurtzman & Herman (1970b) Saccharomycopsis lipolytica (Wickerham, Kurtzman & Herman) Yarrow (1972) Mycotorula lipolytica F.C. Harrison (1928) Torula lipolytica (F.C. Harrison) Jacobsen (Lodder 1934) Candida lipolytica (F.C. Harrison) Diddens & Lodder (1942) Azymoprocandida lipolytica (F.C. Harrison) Novak & Zsolt (1961) Monilia cornealis Nannizzi (Bencini and Federici 1928) Proteomyces cornealis (Nannizzi) Dodge (1935) Pseudomonilia deformans Zach (Wolfram and Zach 1934b) Candida deformans (Zach) Langeron & Guerra (1938) Candida lipolytica (F.C. Harrison) Diddens & Lodder var. deformans (Zach) van Uden & H.R. Buckley (1970) Candida olea van Rij & Verona (1949) Candida paralipolytica K. Yamada & Ota (1963) Candida lipolytica (F.C. Harrison) Diddens & Lodder var. thermotolerans Blagodatskaya & Kockova-Kratochvilova (1973) Candida oleophila lizuka, Shimizu, Ishii & Nakajima (1967) nom. nud. Torulopsis petrophilum Takeda, Iguchi, Tsuzuki & Nakano (1972) nom. nud. Candida petrophilum Takeda, Iguchi, Tsuzuki & Nakano (1972) nom. nud, Candida pseudolipolytica Blagodatskaya & Kockova-Kratochvilova (1973) Saccharomycopsis pseudolipolytica Blagodatskaya (1979)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal, ellipsoidal to elongate, (3.0-5.0)X(3.3-15.0) [im, and single, in pairs or small clusters. Growth is butyrous to mycelial and tannish-white in color. Growth on the surface of assimilation media: Pellicles are formed and may be thin or rather thick. Dalmau plate culture on morphology agar:

After

7 days at 25*^C, growth under the coverglass shows pseudohyphae, and true hyphae are usually present as well. The septa of true hyphae have a single central pore that lacks tapered edges (Kreger-van Rij and Veenhuis 1973). Aerobic growth is white to tannish-white and smoothglistening to dull and convoluted. Colony margins may be entire or lobed. Formation of ascospores: This species is heterothallic. Asci are unconjugated and may form from natural diploids or from diploids resulting from conjugation of complementary mating types. Asci are usually produced on hyphal cells but infrequently an ascus will arise on a single blastoconidium. Asci may be either stalked or sessile, and they become deliquescent as they mature. Generally, one to four ascospores are formed in each ascus (Fig. 192). Ascospore shape is quite variable and is determined in part by the mating types paired. Ascospores from NRRL YB-

w

'7

•I

u M

Fig. 192. Y. lipolytica, CBS 6124.1 xCBS 6124.2. Asci with ascospores, after 1 week at 25°C, on YM agar. Bar==5 [im.

55. Yarrowia van der Walt & von Arx / C.P. Kurtzman

423-3 xNRRL YB-423-12 are spheroidal, hat-shaped, or irregular, and may be roughened, whereas ascospores from NRRL YB-421xNRRL YB-423-12 are hemispheroidal and somewhat saucer-like. Ascospores were observed on YM agar after 3-7 days at 25''C. Herman (1971b) reported increased fertility and ascosporulation when complementary mating types were paired on RG medium. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v v w/v -

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

+ +

w/V

+ + +

growth

2-Keto-D-gluconate Starch formation 5-Keto-D-gluconate Gelatin liquefaction + Saccharate Growth at 37°C v 10% NaCl/5% glucose Co-Q: 9 (Yamada and Kondo 1972b). Mol% G + C: 49.6, CBS 599 {T^: Stenderup and Bak 1968); 50.2, CBS 6124 {T^: Nakase and Komagata 1971f).

Origin of the strains studied: Refrigerated meat products, U.S.A. (8); Pseudomonilia deformans (CBS 2071, NRRL Y-321); Monilia cornealis (CBS 2070, NRRL Y-323), from the cornea of a human eye; petroleum products (7); agricultural (corn) processing plant, Illinois, U.S.A. (17); compost soil, Hungary (1); unknown (17). Complementary mating types: NRRL YB-423-3

421

(CBS 6124.1) and NRRL YB-423-12 (CBS 6124.2), single-ascospore isolates from NRRL YB-423. Type strain: CBS 6124 (NRRL YB-423), an ascosporogenous strain isolated by Wickerham from corn fiber tailings, Illinois, U.S.A. Comments on the genus Wickerham et al. (1970a,b) discovered the teleomorph of Candida lipolytica, which they described as Endomycopsis lipolytica. However, van der Walt and Scott (1971b) pointed out that Endomycopsis was an obligate synonym of Saccharomycopsis Schionning, but they placed only some of the species in other genera. Later, Yarrow (1972) transferred E. lipolytica to the genus Saccharomycopsis. Relative to other members of Saccharomycopsis, S. lipolytica appeared unique because of the shape of its ascospores and the presence of coenzyme Q-9. Based on these criteria, van der Walt and von Arx (1980) described the genus Yarrowia for placement of S. lipolytica. Through comparisons of 18S rRNA sequences. Barns et al. (1991) demonstrated Y. lipolytica to be phylogenetically distant from selected members of Candida and several teleomorphic ascomycetous yeast genera. Kurtzman and Robnett (1994a, 1995) showed from partial rRNA/rDNA sequence analyses that Y. lipolytica is only distantly related to most other known ascomycetous yeasts and that its nearest neighbor appears to be Wickerhamiella domercqiae. Y. lipolytica has several physiological properties of industrial significance. The species is well-known for production of proteases, lipase, and utilization of /i-paraffins (Peters and Nelson 1948, Tsugawa et al. 1969). This last property focused interest on Y lipolytica as a potential source of yeast protein from hydrocarbons, a popular idea in an era of low cost petroleum. The discovery in the late 1960's that high yields of citric acid were produced by Y lipolytica (Yamada 1977) signaled a dramatic change in the fermentation industry, because the yields of this industrially important acidulant were about twice that obtained from Aspergillus niger, the industry mainstay since the early 1900's.

422

Vb. Descriptions of teleomorphic ascomycetous genera and species

56. Zygoascus

M.Th. Smith

M.Th. Smith Diagnosis of the genus Asexual reproduction is by multilateral budding, and formation of pseudomycelium and true hyphae with blastoconidia. Hyphal septa have micropores. Asci are formed after fusion of opposing hyphal cells and are obovate to spheroidal, persistent and contain 14 hemispheroidal to galeate ascospores. Sugars are fermented. Nitrate is not assimilated. Diazonium blue B reaction is negative. Type species Zygoascus hellenicus M.Th. Smith Species accepted 1. Zygoascus hellenicus M.Th. Smith (1986) Systematic discussion of the species 56.1. Zygoascus hellenicus M.Th. Smith (1986) Anamorph: Candida hellenica (Verona & Picci) D.S. King & S.-C. Jong Synonyms: Trichosporon hellenicum Verona & Picci (1958) Candida hellenica (Verona & Picci) D.S. King & S.-C. Jong (1977) Candida steatolytica Yarrow (1969) Candida inositophila Nakase (1975) Pichia hangzhouana Lu & M.X. Li (1989)

Growth on glucose-yeast extract-peptone water: After 3 days at IS^'C, the cells are ovoidal, long ovoidal, sausage-shaped, or elongate to cylindroidal, (2.05.0)X(4.5-15.5) jim. Pseudomycelium with long branches and mycelial cells (up to 30|im in length) may also be present. A sediment and ring with islets or a thick wrinkled pellicle are formed. Growth on glucose-yeast extract-peptone agar: After one month at 25''C, the streak culture is white or cream-colored, shiny or dull, soft or slightly membranous, and smooth or delicately wrinkled. A mycelial border is present.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+

Lactose Raffinose Trehalose

-

V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

+

V

+ + + + + + + V

-

+

V

V

+ + V V

+ +

V

+

-

+ V

+ + V

+ + V V V

+ n

-

Dalmau plate culture on corn meal agar: Both pseudomycelium and true hyphae are abundantly formed. Pseudohyphal cells slender and often curved. Ovoidal blastoconidia are present.

Additional assimilation tests and other growth characteristics:

Formation of ascospores: The species is heterothallic. Asci, which may be single or in clusters, form either directly from conjugation of opposite hyphal cells, where the conjugation bridge forms one or more lateral outgrowths which develop into asci, or from apical cells which arise after sequential buddings of the lateral outgrowths. Asci are obovoidal to spheroidal and persistent. One to four hemispheroidal to hat-shaped ascospores are formed (Fig. 193). Ascospores were observed on 5% Difco malt agar within 7-21 days at 25°C.

Co-Q: 9 (Yamada et al. 1976b). Mol% G + C: 43.9, CBS 6736 (T^: Nakase 1975); 43.7, CBS 4099 (T^: Meyer et al. 1984); 43.5-44.9, 3 strains, CBS 5839, CBS 6726, CBS 7115 (rn,: Smith 1986).

50% Glucose 60% Glucose Fat splitting

+ v

Growth at 3 7 T Growth at 42°C

+

Origin of the strains studied: CBS 5839, mastitic bovine udder, van der Walt, mating type a, type strain of Candida steatolytica; CBS 6736, washings of ion exchange resin, Nakase, mating type a, type strain of Candida inositophila; CBS 4099, fermenting grape must, Verona, mating type a, type strain of Trichosporon hellenicum; mating type a from grape must (1), organic

423

56. Zygoascus M. Th. Smith / M. Th. Smith Table 45 Differentiating characteristics of some genera of the Endomycetaceae and Saccharomycetaceae (classification after von Arx 1981)

Family/genus

Structure of septa

Apical cell on asci

Deliquescence of asci

Coenzyme Q system

Urease

-

Endomycetaceae Ambroziozyma

Dolipore + plug

Hormoascus

Dolipore + plug

Botryoascus

Micropores

Endomyces

Micropores

Hyphopichia

Micropore (1 central)

-

Stephanoascus

Micropore(s)

+

Zygoascus

Micropore (1 central)

-

Yarrowia

Micropore (1 central)

Saccharomycopsis

Micropores

-

V

7

+

7

+

8

+

8

+

8

-

9

+

9

+

+

8

-

9

Saccharomycetaceae

Complementary mating types: CBS 5839 and CBS 6736. Type strain: Holotype as dried sporulating specimen of CBS 5839xCBS 6736. Living strains CBS 5839 and CBS 6736. Comments on the genus The genus Zygoascus is characterized by the production of budding cells, pseudohyphae, septate hyphae and asci with 1-4 hemispheroidal to galeate ascospores which have a distinct electron-dense base (Smith 1986). In this respect, Zygoascus resembles eight yeast genera as classified by von Arx (1981) in the Endomycetaceae and Saccharomycetaceae. However, Zygoascus can be Fig. 193. Z hellenicus, CBS 5839xCBS 6736. Asci with ascospores on distinguished from these genera either by morphological 5% Difco malt agar after 7 days at 25''C. Bar= 10 [im. differences of the septa and the asci or by differences acid fermentation (1), tunnels of Xyleborus ferrugineus in in biochemical properties (Table 45). Kurtzman and Harpephyllum caffrum (1), synthetic medium of sucrose Robnett (unpublished data) found Pichia hangzhouana and ammonium, pH 1.5-3.5 (1), unknown (1), and mating and Z. hellenicus to have identical nucleotide sequences type a from equipment in soft drink factory (1), deep- in the 5' end of the large subunit rDNA, indicating that the two taxa are conspecific. frozen orange juice (1).

Vb. Descriptions of teleomorphic ascomycetous genera and species

424

57. Zygosaccharomyces

Barker

C.R Kurtzman Diagnosis of tlie genus Vegetative reproduction is by multilateral budding. Cells are spheroidal, ellipsoidal or elongate. Pseudohyphae may be present but true hyphae are not formed. Asci are persistent and may be unconjugated or show conjugation between a cell and its bud; most frequently, asci form following conjugation between independent cells, often with both cells producing ascospores. Ascospores are smooth, spheroidal to ellipsoidal, with 1 ^ per ascus. Glucose is fermented. Nitrate is not assimilated. Pellicles are not formed on liquid media. Coenzyme Q-6 is produced. Diazonium blue B reaction is negative. Type species Zygosaccharomyces barken Saccardo & Sydow An original culture no longer exists, but Z barkeri, the type species of Zygosaccharomyces, may be a synonym of Z rouxii. Species accepted 1. Zygosaccharomyces 2. Zygosaccharomyces 3. Zygosaccharomyces 4. Zygosaccharomyces 5. Zygosaccharomyces 6. Zygosaccharomyces 7. Zygosaccharomyces 8. Zygosaccharomyces 9. Zygosaccharomyces

bailii (Lindner) Guilliermond (1912) bisporus H. Naganishi (1917) cidri (Legakis) Yarrow (1977) fermentati H. Naganishi (1928) florentinus Castelli ex Kudryavtsev (1960) mellis Fabian & Quinet (1928) microellipsoides (Osterwalder) Yarrow (1977) mrakii Capriotti (1958) rouxii (Boutroux) Yarrow (1977)

Key to species See Table 46. 1. 2(1). 3(2). 4(3). 5(1). 6(5). 7(6). 8(6).

a b a b a b a b a b a b a b a b

Growth with 0.1% cycloheximide -^ 2 Absence of growth with 0.1% cycloheximide -^ 5 Growth at 2,TC Absence of growth at 37°C -^ 3 Inositol required for growth Inositol not required for growth -^ 4 a-Methyl-D-glucoside assimilated a-Methyl-D-glucoside not assimilated Melibiose assimilated Melibiose not assimilated -^ 6 Growth on agar with 1% acetic acid —^ 7 Absence of growth on agar with 1% acetic acid -^ 8 Trehalose assimilated Trehalose not assimilated Growth with 16% NaCl/5% glucose Absence of growth with 16% NaCl/5% glucose

Systematic discussion of the species 57.1. Zygosaccharomyces bailii (Lindner) Guilliermond (1912) Synonyms: Saccharomyces bailii Lindner (1895) Zygosaccharomyces mandshuricus Saito (1914) Zygosaccharomyces nishiwakii Guilliermond (1930) Zygosaccharomyces naniwaensis Otani (1931) Zygosaccharomyces sake Suminoe (Naganishi 1941) Saccharomycodes mestris Marcilla & Feduchy (1943)

Z fermentati:

p. 427

Z cidri:

p. 426

Z florentinus: Z mrakii: Z microellipsoides:

p. 428 p. 430 p. 430

Z bailii: Z bisporus: Z rouxii: Z mellis:

p. p. p. p.

424 426 431 429

Zygosaccharomyces acidifaciens Nickerson (1943) Saccharomyces acidifaciens (Nickerson) Lodder & Kreger-van Rij (1952) Saccharomyces elegans Lodder & Kreger-van Rij (1952) Saccharomyces elegans Lodder & Kreger-van Rij var. intermedia Verona & Zardetto de Toledo (1959b) nom. nud.

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ellipsoidal, (3.17.0)x(3.6-11.8)|im, and single or in pairs. Growth is butyrous and tannish-white in color.

57. Zygosaccharomyces

425

Barker / C.R Kurtzman

Table 46 Key characters of species in the genus

Zygosaccharomyces

Assimilation

Species

Growth 0.1% Cycloheximide

W/o inositol

GTYE/1% acetic acid

16%NaCl/ 5%glucose

3TC

-

-

+

X

X

V

-

-

-

+

X

V

Z. cidri

+

+

+

+

+

V

+

+

V

+

Z. florentinus

+

+

+

+

+

Z. mellis

V

-

+

+

-

+

Z. microellipsoides Z. mrakii

-

+

+

+

-

-

Z. rouxii

X

-

-

+

-

-

Z. fermentati

-

-

+

V

Tre

Mel

Zygosaccharomyces bailii

X

Z. hisporus

a-MG

+

^ Abbreviations: Tre, trehalose; Mel, melibiose; a-MG, a-methyl-D-glucoside; GTYE/1% acetic acid, glucose-tryptone-yeast extract agar with 1% acetic acid; 16%NaCl/5%glucose, 16%)NaCl/5%glucose in yeast nitrogen base.

Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: After 7 days at 25''C, growth under the coverglass often shows pseudohyphal outgrowths, but the pseudohyphae usually show little branching and the cells are seldom elongated. True hyphae are not formed. Aerobic growth is tannishwhite, dull-glistening with a smooth to finely convoluted surface, butyrous, and with margins that are entire to finely lobed. A faint, acidic odor is present. Formation of ascospores: Asci are persistent and generally conjugated with each conjugant forming one or two smooth, globose to ovoidal ascospores (Fig. 194). The species appears homothallic. Ascospores were observed on YM and 5% malt extract agars after 3-30 days at 25*^0.

6^ •

^

^v

%3

Fig. 194. Z. bailii, CBS 1097. Conjugated ascus with ascospores, after 3 weeks on 5% malt extract agar at 25''C. Bar = 5 |im.

Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

w/-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V V +/w -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose 12.5% NaCl/5% glucose 15% NaCl/5% glucose 16% NaCl/5% glucose 17% NaCl/5% glucose

v +/w +/w +/w +/w +/w

18% NaCl/5% glucose Starch formation Gelatin liquefaction GTYE/1% acetic acid^ 0.1%) Cycloheximide w/o Inositol Growth at 37°C Growth at 40°C

+ +/w V + + -

growth +/w

+/w + V

n

^ Growth on GTYE agar with \% acetic acid (see Table 46). Co-Q: 6, CBS 680 and 2 additional strains (Yamada et al. 1976b). Mol% G + C: 40.5, CBS 680 (7;^: Nakase and Komagata 1971e); 43.845.5, CBS 680 and 10 additional strains (BD: Kurtzman 1990c).

Origin of the strains studied:

CBS 680 (NRRL

Vb. Descriptions of teleomorphic ascomycetous genera and species

426

Y-2227), Inst, of Brewing, Tokyo; apple juice, Netherlands (1); spoiled salad dressing, U.S.A. (9). Type strain: CBS 680. Comments: Z bailii has a worldwide distribution and is often isolated from spoiled acidified condiments. Kurtzman et al. (1971) showed that much of the yeast spoilage of mayonnaise and salad dressing was due to Z. bailii. Z bailii is of potential industrial interest. Nickerson (1943), Nickerson and Carroll (1945) and Spencer and Sallans (1956) reported some strains to produce large amounts of L-arabitol, glycerol, erythritol and mannitol. 57.2. Zygosaccharomyces bisporus H. Naganishi (1917) Synonym: Saccharomyces bisporus (H. Naganishi) Lodder & Kreger-van Rij (1952) [nee Zygosaccharomyces bisporus Anderson (1917)]

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.35.2)x(2.4-10.1)|im, and single or in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass may occasionally show a few short chains of ellipsoidal cells, but neither well-developed pseudohyphae nor true hyphae are formed. Aerobic growth is butyrous, white to tannishwhite, dull-glistening, with a smooth surface, and with margins that are entire or lobed. A faint, acidic odor is present. Formation of ascospores: Asci are persistent and often conjugated, with each conjugant forming one or two smooth, globose to ovoidal ascospores (Fig. 195). The species appears homothallic. Ascospores were observed on YM and 5% malt extract agars after 5-30 days at 25''C.

1« 0^^ *©

Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V s s v -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose 12.5% NaCl/5% glucose 15% NaCl/5% glucose 16% NaCl/5% glucose 17% NaCl/5% glucose

v + v v v v

18% NaCl/5% glucose Starch formation Gelatin liquefaction GTYE/1% acetic acid^ 0.1% Cycloheximide w/o Inositol Growth at 3 7 T

+/w

^ Growth on GTYE agar with \% acetic acid (see Table 46). Co-Q: 6, CBS 702 and 1 additional strain (Yamada et al. 1976b). MoI% G + C: 44.1, 43.7, CBS 702, IFO 0723 (T^: Nakase and Komagata 1971e); 44.0, CBS 702 (BD: Price et al. 1978); 45.0-45.6, CBS 702 and 2 additional strains (BD: Kurtzman 1990c).

Origin of the strains studied: CBS 702 (NRRL Y-12626), from K. Saito; CBS 1082, from tea-beer fungus, Java; NRRL Y-7253, from spoiled salad dressing, U.S.A. Type strain: CBS 702. Comments: Z bisporus is often isolated from spoiled, acidic foods. Painting and Kirsop (1984) and Toh-e et al. (1982, 1984) discovered DNA plasmids in Z bailii, Z bisporus and Z rouxii.

€9\

/J • '.y

/ ^ Fig. 195. Z bisporus, NRRL Y-7253. Conjugated asci with ascospores after 20 days on 5% mah extract agar at 2 5 ^ . Bar = 5 ^im.

57.3. Zygosaccharomyces cidri (Legakis) Yarrow (von Arx et al. 1977) Synonyms: Saccharomyces cidri Legakis (1961) Torulaspora cidri (Legakis) van der Walt & E. Johannsen (1975a)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ellipsoidal, or occasionally cylindrical, (2.3-5.9)x(3.0-6.2) |im, and single or in pairs. Growth is butyrous and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed.

57. Zygosaccharomyces Barker / C.P. Kurtzman

All

Dalmau plate culture on morphology agar: After Additional assimilation tests and other growth 7 days at 25''C, growth under the coverglass may characteristics: Starch formation occasionally show short chains of ellipsoidal cells, but 2-Keto-D-gluconate 5-Keto-D-gluconate Gelatin liquefaction neither well-developed pseudohyphae nor true hyphae are Saccharate GTYE/1% acetic acid^ formed. Aerobic growth is butyrous, tannish-white, dull to 10% NaCl/5% glucose 0.1%) Cycloheximide + glistening with a smooth surface, and with entire to finely 12.5% NaCl/5% glucose w/w/o Inositol 15% NaCl/5% glucose Growth at 37°C lobed margins. A faint, acidic odor is present. Formation of ascospores: Asci are persistent and generally conjugated, with each conjugant forming one, two, or three smooth, globose to ovoidal ascospores. (Fig. 196). The species appears homothallic. Ascospores were observed on YM and 5% malt extract agars after 1-A weeks at 25°C.

^ Growth on GTYE agar with \% acetic acid (see Table 46). Co-Q: Not determined. Mol% G + C: 42.6, CBS 4575 (BD: Price et al. 1978); 43.9, 43.3, CBS 4575, CBS 2950 (BD: Kurtzman 1990c).

Origin of the strains studies: CBS 4575 (NRRL Y-12634) and CBS 2950 (NRRL Y-12635), both from cider. Type strain: CBS 4575. 57.4. Zygosaccharomyces fermentati H. Naganishi (1928)

i9m Fig. 196. Z. cidri, CBS 4575. Conjugated ascus with ascospores after 4 weeks on 5% malt extract agar at 25°C. Bar = 5 ^im.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

Lactose Raffinose Trehalose

-

+ + s + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+

-

+ +

-

+

V

-

+ +

+ +

-

+ + +

-

+ +

-

Synonyms: [non Zygosaccharomyces fermentati (Saito) Krumbholz (1933)] Debaryomyces mandshuricus H. Naganishi (1924) Zymodebaryomyces mandshuricus (H. Naganishi) Novak & Zsolt (1961) Torulaspora manchurica (H. Naganishi) van der Walt & E. Johannsen (1975a) Saccharomyces montanus Phaff, M.W. Miller & Shifrine (1956) Saccharomyces malacitensis Santa Maria (1960) nom. nud. Saccharomyces nilssoni (Capriotti) Santa Maria var. malacitensis Santa Maria (1963b) Saccharomyces amurcae van der Walt (1970c) Torulaspora amurcae (van der Walt) van der Walt & E. Johannsen (1975a) Saccharomyces albasitensis Santa Maria (1978) Saccharomyces astigiensis Santa Maria (1978)

Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to cylindrical, (2.07.1)x(3.0-8.1)|im, and occur singly, in pairs or in small clusters. Growth is butyrous and tannish-white. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25^C, growth under the coverglass may show simple, branched pseudohyphae, but true hyphae are not present. Aerobic growth is butyrous, tannish-white, and with a smooth, glistening surface. Colony margins are entire to irregularly lobed. A faint, acidic, ester-like odor is present. Formation of ascospores: Asci are persistent and may be unconjugated or show conjugation between independent cells. Asci form one to four spheroidal to ovoidal ascospores that appear smooth (Fig. 197). The species is probably homothallic. Ascospores were observed on YM, corn meal and 5% malt extract agars after 2-4 weeks at 25'^C. Fermentation: Glucose Galactose Sucrose Maltose

+ + + +

Lactose Raffinose Trehalose

v +

Vb. Descriptions of teleomorphic ascomycetous genera and species

428

Y-12620), type strain of Saccharomyces malicitensis, alpechin, Spain. Type strain: CBS 707.

f ri^ Fig. 197. Z. fermentati, CBS 707. Conjugated and unconjugated asci with ascospores after 4 weeks on 5% malt extract agar at 25''C. Bar = 5 fxm.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + V + V + + V V -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose 12.5% NaCl/5% glucose 15% NaCl/5% glucose 16% NaCl/5% glucose 17% NaCl/5% glucose

+ v v v v v

18% NaCl/5% glucose Starch formation Gelatin liquefaction GTYE/1% acetic acid^ 0.1% Cycloheximide w/o Inositol Growth at 3 7 T

^ Growth on GTYE agar with \% acetic acid (see Table 46). Co-Q: 6, 2 strains (Yamada et al. 1976b). MoI% G + C: 42.9, 43.4, 2 strains {T^: Nakase and Komagata 1971e); 4 2 . 9 ^ 3 . 4 , CBS 707 and 2 additional strains (BD: Price et al. 1978); 4 4 . 0 ^ 4 . 5 , CBS 707 and 6 additional strains (BD: Kurtzman 1990c).

Origin of the strains studied: CBS 707 (NRRL Y-1559), sediment of a peppermint beverage; CBS 6544 (NRRL Y-17054), oak tree {Quercus sp.), California, U.S.A. (1); CBS 6711 (NRRL Y-17055), orange drink, Iraq (1); CBS 4506 (NRRL Y-7434), fruit fly (Drosophila sp.), California (1); CBS 7004 (NRRL Y-11844), type strain of Saccharomyces astigiensis, alpechin, Spain; CBS 7005 (NRRL Y-11847), type strain of Saccharomyces albasitensis, alpechin, Spain; CBS 4686 (NRRL

nilssoni var.

Comments: Kurtzman (1990c) determined the extent of nDNA relatedness between strains of Z. fermentati and found the species to be comprised of two populations each having high intragroup complementarity (95%) but diminished intergroup relatedness (70-77%). The first group included the type strain as well as CBS 6544 and CBS 6711. The second group was comprised of the type strains of Saccharomyces montanus (CBS 4506), S. astigiensis (CBS 7004), S. albasitensis (CBS 7005) and S. nilssoni var. malicitensis (CBS 4686). The divergent population has been maintained within Z fermentati, but genetic crosses might show members of this group to be a sibling species of Z fermentati. 57.5. Zygosaccharomyces florentinus Castelli ex Kudryavtsev (I960) Synonyms: Saccharomyces florentinus (Castelli ex Kudryavtsev) Lodder & Kreger-van Rij (1952) Torulaspora florentina (Castelli ex Kudryavtsev) van der Walt & E. Johannsen (1975a) Zygosaccharomyces eupagycus Sacchetti ex Kudryavtsev (1960) Saccharomyces eupagycus (Sacchetti ex Kudryavtsev) van der Walt (1970d) Torulaspora eupagyca (Sacchetti ex Kudryavtsev) van der Walt & E. Johannsen (1975a)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2.1-7.0) x (2.57.1) [im, and occur singly, in pairs, or occasionally in small clusters. Growth is butyrous and white to tannish-white in color. Growth on the surface of assimilation Pellicles are not formed.

media:

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows occasional outgrowths of relatively simple, moderately branched pseudohyphae. True hyphae are not formed. Aerobic growth is butyrous, tannish-white, glistening, and with a smooth to finely striated surface. Margins are finely lobed. A faint, ester-like odor is present. Formation of ascospores: Asci are persistent and generally form following conjugation between individual cells, but occasional asci may be unconjugated or show conjugation between a cell and its bud. One to four smooth, spheroidal to subspheroidal ascospores form in each ascus. The species appears to be homothallic. Ascospores were observed on YM, corn meal, and 5% malt extract agars after 1-4 weeks at 25''C.

Fermentation: Glucose Galactose Sucrose Maltose

+ + + +

Lactose Raffinose Trehalose

-

+ +

429

57. Zygosaccharomyces Barker / C.R Kurtzman

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

cylindroidal, (2.5-2.9)x(3.0-6.2) |im, and occur singly, in pairs, and in small clusters. Growth is butyrous and white to tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. + + + w/-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate GTYE/1% acetic acid^ Saccharate 0.1% Cycloheximide 10% NaCl/5% glucose w/o Inositol Starch formation Growth at 37T ^ Growth on GTYE agar with Wo acetic acid (see Table 46). Co-Q: 6, AJ 4100 (Yamada et al. 1976b). Mol% G + C: 42.4, CBS 746 and CBS 748 (BD: Price et al. 1978); 43.1, 42.8, CBS 746 and CBS 6081 (BD: Kurtzman 1990c).

Origin of the strains studied: CBS 746 (NRRL Y-1560), from grape must, Italy; CBS 748 (NRRL Y-1558), type strain of Z. eupagycus, orange drink, Italy; CBS 6081 (NRRL Y-12642), mountain laurel {Rhododendron sp.), Japan. Type strain: CBS 746. Comments: Price et al. (1978) showed 100% nDNA relatedness between the type strains of Z florentinus and Z eupagycus, thus demonstrating the conspecificity of the two taxa. 57.6. Zygosaccharomyces mellis Fabian & Quinet (1928) Synonyms: Saccharomyces mellis (Fabian & Quinet) Lodder & Kreger-van Rij (1952) Saccharomyces bisporus (H. Naganishi) Lodder & Kreger-van Rij var. mellis (Fabian & Quinet) van der Walt (1970d) Zygosaccharomyces mellis-acidi von Richter (1912) Zygosaccharomyces nadsonii Guilliermond (1918) Zygosaccharomyces nussbaumeri Lochhead & Heron (1929) Zygosaccharomyces amoeboideus Kroemer & Krumbholz (Krumbholz 1931) Zygosaccharomyces polymorphus Kroemer & Krumbholz f. stellata Krumbholz (1931) Saccharomyces rouxii Boutroux var. polymorphus (Kroemer & Krumbholz) Lodder & Kreger-van Rij (1952) Zygosaccharomyces perspicillatus Sacchetti (1932c) Zygosaccharomyces ravennatis Sacchetti (1932c) Kluyveromyces osmophilus BCreger-van Rij (1966a)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, or infrequently

Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass shows occasional branched chains of elongated cells, but neither well-developed pseudohyphae nor true hyphae occur. Aerobic growth is butyrous, white, with surfaces that are smooth or irregular, and either dull or glistening. Margins are finely or irregularly lobed. A faint, acidic, ester-like odor is present. Formation of ascospores: observed in the present study.

Ascospores were not

Fermentation: Glucose Galactose Sucrose Maltose

+ w/+/w

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

w/-

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ s s v -

Additional assimilation tests and other growth characteristics:

Starch formation 2-Keto-D-gluconate Gelatin liquefaction 5-Keto-D-gluconate GTYE/1% acetic acid^ Saccharate 0.1% Cycloheximide 10% NaCl/5% glucose + w/o Inositol 12.5% NaCl/5% glucose +/w Growth at 37T 15% NaCl/5% glucose w/16% NaCl/5% glucose ^ Growth on GTYE agar with \% acetic acid (see Table 46). Co-Q: 6, AJ 5262, AJ 5263 (Yamada et al. 1976b). Mol% G + C: 41.2-41.8, CBS 736 and 6 additional strains (BD: Kurtzman 1990c).

Origin of the strains studied: CBS 736 (NRRL Y-12628), from honey; NRRL Y-56, NRRL Y-58, unknown sources, Tanner Collection, U.S.A.; NRRL Y-1024, honey?, Lochhead strain D-1; NRRL Y-1601 (CBS 684), honey, von Richter, Germany?; NRRL Y-17113, NRRL Y-17114, alpechin, Spain. Type strain: CBS 736.

430

Vb. Descriptions of teleomorphic ascomycetous genera and species

Comments: Z mellis previously has been considered Assimilation: + A^-Acetyl-D-glucosamine a variety of Z bisporus (van der Walt 1970d) and as Glucose + Methanol a synonym of Z rouxii (Yarrow 1984d). Because of Galactose V L-Sorbose Ethanol +/w the difficulty in identifying strains of Zygosaccharomyces Sucrose + Glycerol V using phenotypic tests, Kurtzman (1990c) examined Maltose Erythritol Ribitol relationships among members of the genus from extent Cellobiose + Galactitol of nDNA complementarity. The study revealed that Trehalose + Lactose D-Mannitol Z mellis is a distinct species. Additionally, two of the Melibiose + D-Glucitol V strains (NRRL Y-56 and NRRL Y-1601) showed ca. Raffinose + a-Methyl-D-glucoside 75% relatedness with the type strain but 97% relatedness Melezitose Salicin + D-Gluconate s with each other. These two isolates are presently regarded Inulin DL-Lactate + as divergent strains of Z mellis, rather than as members Soluble starch D-Xylose Succinate V of a sibling species. L-Arabinose Citrate Separation of Z mellis and Z rouxii is difficult using D-Arabinose Inositol Hexadecane standard growth tests. Z rouxii is slightly more tolerant D-Ribose Nitrate of sodium chloride than is Z mellis, thus allowing L-Rhamnose Vitamin-free their separation on a medium containing 16%) NaCl with D-Glucosamine 5%) glucose (Kurtzman 1990c). Because the difference Additional assimilation tests and other g;rowl in sodium chloride tolerance between the two species is characteristics: + Gelatin liquefaction rather slight, reference strains need to be included for 2-Keto-D-gluconate 5-Keto-D-gluconate GTYE/1% acetic acid^ comparison. 0.1% Cycloheximide Saccharate 10% NaCl/5% glucose w/o Inositol + Starch formation Growth at 37°C 57.7. Zygosaccharomyces microellipsoides ^ Growth on GTYE agar with 1% acetic acid (see Table 46). (Osterwalder) Yarrow (von Arx et al. 1977) Co-Q: 6, AJ 4091, AJ 5292 (Yamada et al. 1976b). Synonyms: Saccharomyces microellipsoides (as S. microellipsodes) Osterwalder (1924a) Torulaspora microellipsoides (Osterwalder) van der Walt & E. Johannsen (1975a)

Mol% G + C: 39.5, 39.3, AJ 4091, AJ 5292 {T^: Nakase and Komagata 1971e); 40.3, CBS 427 (BD: Price et al. 1978); 41.2, 41.5, CBS 427, CBS 6142 (BD: Kurtzman 1990c).

Origin of the strains studied: CBS 427 (NRRL Y-1549), apple juice, Germany; CBS 2734 (NRRL Growth on 5% malt extract agar: After 3 days Y-17057), berries of black currants {Ribes nigrum), Denat 25°C, the cells are spheroidal to ellipsoidal, (1.8mark; CBS 6142 (NRRL Y-17058), CBS 6143 (NRRL 6.9) X (2.1-7.1) |im, and occur singly, in pairs, and in small Y-17059), tea-beer, Finland; CBS 6641 (NRRL Y-17060), clusters. Growth is butyrous and white to tannish-white in exudate of sandalwood {Myoporum sp.), Hawaii, U.S.A.; color. CBS 6762 (NRRL Y-17061), lemonade, Switzerland. Type strain: CBS 427. Growth on the surface of assimilation media: Pellicles are not formed. 57.8. Zygosaccharomyces mrakii Capriotti (1958c) Dalmau plate culture on morphology agar: After Synonyms: 7 days at 25°C, growth under the coverglass shows Saccharomyces mrakii (Capriotti) van der Walt (1970c) infrequent branched chains of elongated cells, but neither Torulaspora mrakii (Capriotti) van der Walt & E. Johannsen (1975a) well-developed pseudohyphae nor true hyphae occur. Growth on 5% malt extract agar: After 3 days Aerobic growth is butyrous, tannish-white, dull glistening, at 25°C, the cells are spheroidal to ellipsoidal, (2.1and with a finely lobed margin. A faint, acidic, ester-like 7.0)X(3.0-7.5) |im, and single or in pairs. Growth is butyrous and white to tannish-white in color. odor is present. Formation of ascospores: Asci are persistent and generally form following conjugation between independent cells. The asci form one to four smooth, spheroidal ascospores. The species is probably homothallic. Ascospores were observed on YM agar after 24 weeks at 25°C. Fermentation:

Glucose Galactose Sucrose Maltose

+ + +

-

Lactose Raffinose Trehalose

Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass may show poorly differentiated pseudohyphae, but true hyphae are absent. Aerobic growth is butyrous, glistening, and tannish-white with some reddish-brown, highly ascosporogenous areas. Margins are entire to irregularly lobed. A faint, acidic odor is present. Formation of ascospores: Asci are persistent and may be unconjugated or arise following conjugation

57. Zygosaccharomyces Barker / C.P. Kurtzman

between independent cells. Each ascus forms one to four smooth, spheroidal ascospores. The species is probably homothallic. Ascospores were observed on YM agar after 1-4 weeks at 25°C and on Difco yeast morphology agar after 1 week at 25°C. The latter medium gave highly ascosporogenous cultures. Fermentation: Glucose Galactose Sucrose Maltose

+ + +

Lactose Raffinose Trehalose

-

+ +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+

-

+ +

-

+

-

V

s

-

+ +

-

+

-

+

Additional assimilation tests and other growth characteristics: Gelatin liquefaction 2-Keto-D-gluconate + GTYE/1% acetic acid^ 5-Keto-D-gluconate 0.1% Cycloheximide + Saccharate w/o Inositol + 10% NaCl/5% glucose v Growth at 37°C 12.5% NaCl/5% glucose Starch formation 1 Growth on GTYE agar with 1% acetic acid (see Table 46). Co-Q: Not determined. Mol% G + C: 41.2, 41.3, CBS 42 18 and 1 additional strain (BD: Price et al. 1978); 42.2, 42.1, CBS 4218, CBS 4219 (BD: Kurtzman 1990c).

Origin of the strains studied: CBS 4218 (NRRL Y-12654), CBS 4219 (NRRL Y-12655), both from silage, Italy. Type strain: CBS 4218. 57.9. Zygosaccharomyces rouxii (Boutroux) Yarrow (von Arx et al. 1977) Synonyms: Saccharomyces rouxii Boutroux (1884) Zygosaccharomyces barkeri Saccardo & Sydow (1902) 1 Saccharomyces soya Saito (1907) 1 Zygosaccharomyces soya (Saito) Takahashi & Yukawa (1915) 1 Zygosaccharomyces japonicus Saito var. soya (Saito) Dekker (Stelling-Dekker 1931) Zygosaccharomyces japonicus Saito (1909) Zygopichia japonica (Saito) Klocker (1924) 7Zygosaccharomyces major Takahashi & Yukawa (1915) 7Zygosaccharomyces salsus Takahashi & Yukawa (1915) 1 Zygopichia salsa (Takahashi & Yukawa) Klocker (1924)

431

1 Zygosaccharomyces dairensis H. Naganishi (1928) Zygosaccharomyces uini H. Naganishi (1928) Zygosaccharomyces cauarae Rodio var. beauveriei Beauverie (1929) Zygosaccharomyces richteri Lochhead & Heron (1929) 1 Zygosaccharomyces cauarae Rodio var. amoeboideus Lodder (1932) Zygosaccharomyces gracilis Karamboloff & Krumbholz (1931) Zygosaccharomyces polymorphus Kroemer & Krumbholz (Krumbholz 1931) Zygosaccharomyces polymorphus Kroemer & Krumbholz f. craterica Krumbholz (1931) Zygosaccharomyces polymorphus Kroemer & Krumbholz f. typica Krumbholz (1931) 1 Saccharomyces rouxii Boutroux var. polymorphus (Kroemer & Krumbholz) Lodder & Kreger-van Rij (1952) Zygosaccharomyces variabilis Kroemer & Krumbholz (Krumbholz 1931) Zygosaccharomyces rugosus Lochhead & Farrell (Lochhead 1942) 1 Zygosaccharomyces nectarophilus Lochhead & Farrell (Lochhead 1942) Zygosaccharomyces gracilis Karamboloff & Krumbholz ssp. italicus Sacchetti (1932d) Zygosaccharomyces citrus Lodder (1932) Zygosaccharomyces major Takahashi & Yukawa var. threntensis Lodder (1932) Zygosaccharomyces felsineus Sacchetti (1932d) 1 Zygosaccharomyces miso f3 Mogi (1938b) 1 Saccharomyces miso b Mogi (1939) 1 Zygosaccharomyces nukamiso Otani (1939) nom. nud. 1 Zygosaccharomyces halomembranis Etchells & T.A. Bell (1950a) 1 Saccharomyces rouxii Boutroux var. halomembranis (Etchells & T.A. Bell) Onishi (1957) 1 Saccharomyces acidifaciens (Nickerson) Lodder & Kreger-van Rij var. halomembranis (Etchells & T.A. Bell) Onishi (1957) Torulopsis osloensis Dietrichson (1954) nom. nud. Saccharomyces osmophilus Barre & Galzy (1960) nom. nud. ITorulopsis mogii Vidal-Leiria (1966a) Saccharomyces bailii Lindner var. osmophilus van der Walt (1970d) 1 Candida placentae S. Goto (1979b) Saccharomyces placentae S. Goto (1980)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to cylindroidal, (3.07.8)X(3.5-8.1) jim, and occur singly, in pairs, or occasionally in small clusters. Growth is butyrous and white to tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25'^C, growth under the coverglass may show branched, but poorly differentiated pseudohyphae. True hyphae are not formed. Aerobic growth is butyrous, white to tannish-white, with surfaces smooth and glistening or finely convoluted and dull. Margins are entire or finely lobed. A faint, acidic odor is present. Formation of ascospores: Asci are persistent and form one to four spheroidal to ovoidal ascospores that may appear smooth or slightly roughened. Ascosporulation may be preceded by conjugation between two cells or between a cell and its bud. (Fig. 198). Additionally, Wickerham and Burton (1960) reported some strains to represent heterothallic mating types. Ascospores were observed on YM, Gorodkowa and 5% malt extract agars after 3-15 days at either 15'' or 25°C.

432

Fermentation:

Glucose Galactose Sucrose Maltose

Vb. Descriptions of teleomorphic ascomycetous genera and species

+

V

Lactose Raffinose Trehalose

V

+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

-

w/V

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

V

+/w

V

+/w +/w + w/Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate V 18% NaCl/5% glucose 5-Keto-D-gluconate Starch formation Saccharate Gelatin liquefaction 10% NaCl/5% glucose + GTYE/1% acetic acid^ 12.5% NaCl/5% glucose + 0.1% Cycloheximide 15% NaCl/5% glucose 16% NaCl/5% glucose 17% NaCl/5% glucose

+/w +/w

V

w/o Inositol Growth at 37°C Growth at 4 0 T

+

Fig. 198. Z. rouxii, CBS 732. Ascus with ascospores, after 2 weeks on 5% malt extract agar at IS^C. Bar = 5 ^im.

Complementary mating types: CBS 4837 and CBS 4838. Type strain: CBS 732, neotype designated by Lodder and Kreger-van Rij (1952). The type strain of Zygosaccharomyces gracillus ssp. italicus. Comments: On the basis of phenotypic similarity, Candida mogii was believed to represent the anamorph of Z rouxii (Yarrow 1984d). Comparisons of nDNA relatedness showed that the two taxa are separate species (Kurtzman 1990c).

V

-

^ Growth on GTYE agar with 1% acetic acid (see Table 46). Co-Q: 6, CBS 732 and 2 additional strains (Yamada et al. 1976b). Mor/o G + C: 40.0, CBS 732 and 2 additional strains {T^: Nakase and Komagata 1971e); 41.3-^2.3, CBS 732 and 6 additional strains (BD: Kurtzman 1990c).

Origin of the strains studied: CBS 732 (NRRL Y-229), from grape must, Italy; CBS 742 (NRRL Y-998), from honey, Canada; NRRL Y-1053, unknown; CBS 4837 (NRRL Y-2547), CBS 4838 (NRRL Y-2548), miso, Japan; CBS 8000 (NRRL Y-12616), type strain of Saccharomyces placentae, sweet cream sake, Japan; CBS 4021 (NRRL Y-12622), type strain of Saccharomyces bailii var. osmophilus, soy mash, Japan; NRRL Y-12691, chocolate syrup, Pennsylvania, U.S.A.

Comments on the genus The nine species presently accepted in Zygosaccharomyces are genetically distinct from one another on the basis of low nDNA relatedness (Kurtzman 1990c). James et al. (1994b, 1996) examined interspecific relationships among species of Zygosaccharomyces from comparisons of 18S rRNA gene sequences as well as from nucleotide diversity in the two internal transcribed spacer regions (ITSl, ITS2). Species of Torulaspora were included in the ITS study and shown to arise from within Zygosaccharomyces. As discussed under Torulaspora, circumscription of Torulaspora as well as Saccharomyces and Zygosaccharomyces is likely to change once additional molecular comparisons are done.

58. Zygozyma van der Walt & von Arx /M.Th.

433

Smith

58. Zygozyma van der Walt & von Arx M.Th. Smith Diagnosis of the genus Asexual reproduction is by multilateral budding, but occasionally by rudimentary septation with the formation of plasmodesmal canals. Cells are hyaline, encapsulated and spherical to ovoidal. Pseudohyphae and septate hyphae are absent. Colonies are watery, becoming mucoid to glutinous. Asci are saccate, one-to multispored, lytic, arising either from abstricted enlarging evaginations of single cells, from conjugating cells or direct transformation of cells. Ascospores are allantoid to cymbiform, smooth, and amber-colored, and agglutinate when released. Sugars are not fermented. Nitrate is not assimilated. Extracellular amyloid material is formed. Diazonium blue B reaction is negative. Type species Zygozyma oligophaga van der Walt & von Arx Species accepted 1. Zygozyma arxii van der Walt, M.Th. Smith & Y. Yamada (1989) 2. Zygozyma oligophaga van der Wah & von Arx (1987) 3. Zygozyma smithiae van der Walt, Wingfield & Y. Yamada (1990) 4. Zygozyma suomiensis M.Th. Smith, van der Walt & Y Yamada (1989) Key to species See Table 47. 1. 2(1). 3(2).

a b a b a b

Trehalose assimilated Trehalose not assimilated -^ 2 Sucrose assimilated Sucrose not assimilated -^ 3 L-Arabinose assimilated L-Arabinose not assimilated

Z arxii:

p. 433

Z. smithiae:

p. 434

Z suomiensis: Z oligophaga:

p. 435 p. 434

Table 47 Key characters of species assigned to the genus Zygozyma Species

Assimilation Sucrose

Trehalose

L-Arabinose

Zygozyma arxii Z. oligophaga Z. smithiae Z. suomiensis

Systematic discussion of the species so ^ r^ " J ^T7 1^ T%r/ rru e -xu o 58.1. Zygozyma arxii van der Walt, M.Th. Smith & A J (van / J Walt X1I7 li.et^al.1 1989d) inon^\ Y.7 x/ Yamada der ^ , . , .o ^ , ^ ..^ , Growth in malt extract: After 3 days at 25T, the ., , ,^ ^ ^ ^^ ,^ ^ ^ ' occur singly or into pairs. Growth(3.0-7.0)x(2.5-5.5)Lim, is scant and a slight cells are globose ellipsoidal, sediment, ^is ,formed. ,After ^ , 1 month ' ; .,at room 1 1 1temperature, 1 . ^^ aencapsulated, slight ring and sediment by are multilateral present. reproduce budding, and ^ . ' . . ;; 1 . I l l

Growth on malt agar: After 3 days at 25°, the cells have the same appearance as in malt extract. The streak , i i i i ^ , culture IS., partly , ^ hyalme ^ , , and . viscous, Kpartly \ butyrous and creamish-gray, smooth, glistenmg, and with an entire A^ ^ i / . ^ .u u margin. After 4 weeks at room temperature, the culture • i ^ u •u ^u u ^ umargin. is butyrous, brownish-cream, smooth, somewhat shiny, Dalmau plate meal agar: After ^^.^^ • j cultures i ^v. on corn ^ ^ -^u slightly raised along the center, and with an entire

434

Vb. Descriptions of teleomorphic ascomycetous genera and species

10 days at 25''C, neither hyphae nor pseudohyphae are formed.

is butyrous, brownish-cream, smooth, somewhat shiny, slightly raised along the center, with an entire margin.

Formation of ascospores: Asci are unattached, conjugated, often dumbbell-shaped, (10.0-15.0, rarely up to 19.0) X (2.0-6.0) jim, one- to multispored, evanescent, and generally arise from the fusion of protuberances formed by two free cells. Automictic asci are less common. Unconjugated, free asci are rarely observed. Ascospores are allantoid to cymbiform, (2.5-4.5) x(1.01.5) (u.m, glabrous amber-colored, and conglutinate when liberated. Ascus formation was observed on 2% malt agar, V8 agar and 1/10 diluted V8 agar. Sporulation is slow, requiring 2-5 weeks at 15-18°C.

Dalmau plate cultures on corn meal agar: After 10 days at IS^'C, neither pseudohyphae nor septate hyphae are formed. Asci may be present. Formation of ascospores: Asci are saccate, (9.015.0, rarely up to 25.0)x(4.0-7.0, rarely up to 11.0)(Lim, four- to multispored, evanescent and arise from inflated protuberances produced either by adjacent or non-adjacent aggregated cells. Ascospores are allantoid or cymbiform, (2.5^.Ox 1.0-1.5)|im, smooth, amber-colored and conglutinate when liberated. Sporulation is abundant on 2% malt agar and V8 agar after 3-4 days at 25T.

Fermentation: absent.

Fermentation: absent.

Assimilation Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

Starch formation 0.1% Cycloheximide

+ +

-

+ +

-

+ +

A/"-Acetyl-D-g]iucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

Growth at 30°C Growth at 35''C

+

-

+

-

+

-

+

-

n Additional assimilation tests and other growth characteristics:

Co-Q: 9 (van der Wah et al. 1989d). Mol% G + C: 47.4, CBS 7333 {T^: van der Walt et al. 1989d).

Origin of the strains studied: CBS 7333, forest soil. South Africa, J.P. van der Walt. Type strain: CBS 7333 (ATCC 76360), isolated by J.P. van der Walt.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

Starch formation 0.1% Cycloheximide

+ +

V

V

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

Growth at 30''C Growth at 3ST

+

-

+ +

-

+

-

+

-

+

-

+

V n Additional assimilation tests and other growth characteristics: Co-Q: 8 (van der Walt et al. 1987b). Mor/o G + C: 41.7, CBS 7107 {T^: van der Walt et al. 1987b).

Origin of the strains studied: CBS 7107 (ATCC 76359), frass of a bark beetle infesting moribund Ficus tripoda, South Africa, J.P. van der Walt; CBS 7406, frass of Crossotarsus externedentatus in Macaranga capensis, South Africa, J.P. van der Walt. Type strain: CBS 7107 (ATCC 76359), isolated by J.P van der Walt.

58.2. Zygozynta oligophaga van der Walt & von Arx (van der Walt et al. 1987b) Growth in malt extract: After 3 days at 25''C, the cells are globose to ellipsoidal, (3.0-7.0)x(2.5-5.5)|im, 58.3. Zygozynta smithiae van der Walt, Wingfield & encapsulated, reproduce by multilateral budding, and Y. Yamada (1990b) occur singly or in pairs. Growth is scant and a slight Growth in malt extract: After 3 days at 25°C, sediment is formed. After 1 month at room temperature, the cells are globose to ellipsoidal, (3.0-7.0)x(2.5a slight ring and sediment are present. 5.5) (im, encapsulated, reproduce by multilateral budding, Growth on malt agar: After 3 days at 25''C, the cells occasionally on a broad base, and occur singly or in pairs. have the same appearance as in malt extract. The streak Growth is scant and a slight sediment is formed. After culture is partly hyaline to slightly creamish-gray and 1 month at room temperature, a slight ring and sediment viscous. After 4 weeks at room temperature, the culture are present.

58. Zygozyma van der Walt & von Arx / M. Th. Smith

Growth on malt agar: After 3 days at 25''C, the cells have the same appearance as in malt extract. The streak culture is watery to mucoid, hyaline to creamish-opaque, smooth, and shiny with an entire margin. After 4 weeks at room temperature, the culture is butyrous, hyaline to brownish-cream, smooth, somewhat shiny, slightly raised along the center, and with an entire margin. Dalmau plate cultures on corn meal agar: After 10 days at IS^'C, neither pseudohyphae nor septate hyphae are formed. Formation of ascospores: Asci are unconjugated, attached, globose allantoid or amoeboid, multispored, (9.0-18.0x3.0-9.0)|im, evanescent, and arise by the direct transformation of presumed diploid, aggregated, vegetative cells. Ascospores are allantoid to cymbiform, (2.5-3.5X 1.0-1.5) jim, glabrous, amber-colored, and conglutinate when liberated. Ascus formation was observed on 2% malt agar after 6 days at room temperature. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+

-

n

-

Additional assimilation tests and other growth characteristics: Starch formation 0.1%Cycloheximide

+ +

Growth at 30''C Growth at 35''C

+

Co-Q: 9 (van der Walt et al. 1990b). Mol% G + C: 55.7, CBS 7407; 55.3, CBS 7408 (T^: van der Walt et al. 1990b).

435

occur singly or in pairs. Growth is scant and a slight sediment is formed. After 1 month at room temperature, a slight ring and sediment are present. Growth on malt agar: After 3 days at 25°C, the cells have the same appearance as in malt extract. The streak culture is viscous to mucoid, partly hyaline, partly creamish-gray, smooth, glistening, and with an entire margin. After 4 weeks at room temperature, the culture is butyrous, brownish-cream, smooth, somewhat shiny, slightly raised along the center, and with an entire margin. Dalmau plate cultures on corn meal agar: After 10 days at 25°C, neither pseudohyphae nor septate hyphae are produced. Formation of ascospores: Asci arise from abstricted inflated evaginations on single cells or from individual cells in aggregations. Asci are saccate, (5.0-11.0x4.5-7.0) jim, persistent and contain four to numerous (up to 12) ascospores. Ascospores are allantoid to oblong with obtuse ends, (2.0^.5 x 1.0-2.0) |im, and glabrous. Asci are produced after 6 weeks on Difco malt (5%)agar(3%)at 15T. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

s

s

-

+ + + s

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

s +

s s

s

-

n

Additional assimilation tests and other growth characteristics: Starch formation 0.1% Cycloheximide

+ +

Growth at 30°C Growth at 35°C

+

Origin of the strains studied: CBS 7407, CBS 7408, Co-Q: 8 (Smith et al. 1989b). frass of Crossotarus externedentatus (ambrosia beetle) in Mol% G + C: 45.1, CBS 7251 {T^: Smith et al. 1989b). Macaranga capensis, South Africa, J.P. van der Walt. Origin of the strains studied: CBS 7251, skin lesion Type strain: CBS 7407 (ATCC 76360), isolated by of a cow, Finland, E. Tunnela. Type strain: CBS 7251 (ATCC 66456), isolated by J.P. van der Walt. E. Tunnela. 58.4. Zygozyma suomiensis M.Th. Smith, van der Comments on the genus Walt & Y. Yamada (Smith et al. 1989b) Growth in malt extract: After 3 days at 25°C, the In 1987, van der Walt et al. (1987b) introduced the cells are globose to ellipsoidal, (3.0-7.0)x(2.5-5.5)|im, genus Zygozyma to accommodate yeast strains associated encapsulated, reproduce by multilateral budding, and with arboricole Coleoptera in Northern Natal. These

436

Vb. Descriptions of teleomorphic ascomycetous genera and species

Strains formed mucoid colonies on solid medium similar to species of Lipomyces and Myxozyma and produced asci with allantoid ascospores resembling those of the hyphal genus Dipodascopsis. Differences in ascospore shape and absence of septate hyphae were considered decisive characteristics to assign these isolates to a new

genus, with the species Z oligophaga. Van der Walt et al. (1991) emended the description of Zygozyma following demonstration by transmission electron microscopy of the occurrence of plasmodesmal canals in cells of Z oligophaga and Z. smithiae, species that show budding on a broad base.

Part Vc

Descriptions of anamorphic ascomycetous genera and species Contents Aciculoconidium A. aculeatum Arxula A. adeniniuorans A. terrestris Blastobotfjs B. arbuscula B. aristata B. capitulata B. elegans B. gigas B. nivea B. proliferans Botryozyma B. nematodophila Brettanomyces B. anomalus B. bruxellensis B. custersianus B. naardenensis B. nanus Candida C. aaseri C. albicans C. amapae C. anatomiae C. ancudensis C. antillancae C. apicola C. apis C atlantica C. atmosphaerica C. auringiensis C. austromarina C. azyma C. beechii C. bertae C. berthetii C blankii C boidinii C. boleticola C. bombi C bombicola C buinensis C. butyri C. cantarellii C. caseinolytica C. castellii C. castrensis C. catenulata C. chilensis C. chiropterorum C. coipomoensis

439 439 441 441 442 443 444 444 445 446 446 446 447 449 449 450 451 451 451 451 452 454 476 476 479 479 480 481 481 482 483 483 484 484 485 485 486 487 487 488 489 489 490 491 491 492 492 493 493 494 495 495 496

C. conglobata C. cylindracea C. dendrica C. dendronema C diddensiae C. diuersa C. drimydis C. edax C. entomophila C. ergastensis C ernobii C. etchellsii C. ethanolica C. famata C. fennica C. fermenticarens C. floricola C. fluuiatilis C. freyschussii C. friedrichii C. fructus C galacta C. geochares C. glabrata C. glaebosa C. glucosophila C. gropengiesseri C. guilliermondii C. haemulonii C homilentoma C. humilis C. incommunis C. inconspicua C. insectalens C. insectamans C insectorum C intermedia C ishiwadae C karawaiewii C. krissii C kruisii C. krusei C lactis-condensi C. laureliae C. lipolytica C llanquihuensis C. lusitaniae C lyxosophila C. magnoliae C. maltosa C. maris C. maritima C. melibiosica

496 497 497 498 498 499 500 500 500 501 501 502 503 503 503 504 505 505 506 506 507 507 508 508 509 510 510 511 511 512 513 513 514 514 515 515 516 516 517 517 518 519 519 519 520 520 521 521 521 522 523 523 524

C. membranifaciens C. mesenterica C. methanosorbosa C. milleri C mogii C. montana C. multigemmis C. musae C. naeodendra C. nanaspora C. natalensis C. nemodendra C. nitratophila C noruegica C. odintsovae C. oleophila C oregonensis C. oualis C. palmioleophila C. paludigena C. parapsilosis C. pararugosa C. peltata C. petrohuensis C pignaliae C. pini C. populi C. pseudointermedia C. pseudolambica C. psychrophila C. pulcherrima C. quercitrusa C. quercuum C. railenensis C. reukaufii C. rhagii C. rugopelliculosa C. rugosa C saitoana C sake C. salmanticensis C. santamariae C. santjacobensis C. sauonica C. schatavii C. sequanensis C. shehatae C. silvae C. silvanorum C. siluatica C. siluicultrix C. solani C. sonorensis

525 525 526 526 527 527 528 528 529 530 530 531 531 532 532 533 534 535 535 536 536 538 538 539 539 540 541 541 542 542 543 543 543 544 545 545 545 546 546 547 548 549 550 550 551 551 552 553 554 554 555 555 556

438

C. C C. C. C. C C. C. C. C. C. C. C. C. C. C. C C. C. C. C. C.

Vc. Descriptions of anamorphic ascomycetous genera and species

sophiae-reginae sorbophila sorboxylosa spandovensis stellata succiphila suecica tanzawaensis tenuis tepae torresii tropicalis tsuchiyae utilis vaccina valdiviana oalida uanderwaltii vartiovaarae versatilis vinaria uini

556 557 558 558 559 559 560 561 561 562 562 563 564 565 565 566 566 566 567 567 568 569

C. uiswanathii C. wickerhamii C. xestobii C. zeylanoides Geotrichum G. candidum G. capitatum G. citri-aurantii G. clauatum G. decipiens G. fermentans G. fragrans G. ingens G. klebahnii G. ludwigii G. sericeum Kloeckera K. africana K. apiculata K. apis K. corticis K. japonica

K. javanica 570 K. lindneri 570 571 Lalaria 571 Myxozyma 574 M. geophila M. kluyueri 575 M. lipomycoides 575 M. melibiosi 575 575 M. monticola 576 M. mucilagina 576 M. udenii 577 M. uanderwaltii 578 Oosporidium O. margaritiferum 578 579 Saitoella S. complicata 579 580 Schizoblastosporion S. starkeyi-henricii 580 580 Sympodiomyces S. parvus 581 581 Trigonopsis T. variabilis 581

581 581 582 592 593 593 594 594 595 595 596 596 598 598 600 600 602 602 603 603 605 605

59. Aciculoconidium D.S. King & S.-C. Jong / M.Th. Smith

439

59. Aciculoconidium D.S. King & S.-C. Jong M.Th. Smith Diagnosis of the genus Budding cells are ovoidal or ellipsoidal and single, in short chains or clusters. Mycelium is present and consists of branched septate hyphae with blastoconidia. Terminal needle-shaped conidia that are rounded at the base and pointed at the top are also present. Ascospores and asexual endospores are not produced. Sugars are fermented. Nitrate is not assimilated. Diazonium blue B reaction is negative. Type species Aciculoconidium aculeatum (Phaff, M.W. Miller & Shifrine) D.S. King & S.-C. Jong Species accepted \. Aciculoconidium aculeatum (Phaff, M.W. Miller & Shifrine) D.S. King & S.-C. Jong (1976) Systematic discussion of the species 59.1. Aciculoconidium aculeatum (Phaff, M.W. Miller & Shifrine) D.S. King & S.-C. Jong (1976a) Synonym: Trichospown aculeatum Phaff, M.W. Miller & Shifrine (1956)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, budding cells and mycelium are formed. Budding cells are ovoidal or ellipsoidal, (3.58.5)X(4.0-15.0) |im, and single, in chains or in small clusters. Mycelium consists of thin as well as broad hyphae that are septate. Needle-shaped cells, which are rounded at the base and pointed at the other end, frequently arise from blastospores from which they easily separate (Fig. 199). An irregular ring and a mycelial sediment are present. After one month at 25°C, mycelial growth occurs throughout. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is creamcolored, smooth to slightly wrinkled, glossy to dull, and tough. Dalmau plate cultures on corn meal agar: Abundant true mycelium with blastospores is formed. Blastospores are borne singly or successively in chains, and apically-

produce needle-shaped cells, (0.5-2.0)x(6.0-21.5)jjim, which are rounded at the base and pointed at the other end (Fig. 200), are also present. The mycelium may disarticulate. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/w

-

V

+

-

+ + + +

-

s

-

+/w

-

V

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

w/s

-

+ +

s

-

+ + + V

-

+ +

-

n

-

Additional assimilation tests and other growth characteristics: 50% Glucose Growth at 37T -

0.1% Cycloheximide + Co-Q: 9 (Yamada et al. 1982). MoI% G + C: 55.0, CBS 2282 (NRRL YB-4297) {T^\ Dupont and Hedrick 1971).

Fig. 199. A. aculeatum, CBS 5578. Budding cells in glucose-yeast extract-peptone water after 3 days at 25''C. Bar= lOjim.

Origin of the strains studied: CBS 5578, Drosophila occidentalis, do Carmo-Sousa; CBS 2282, D. occidentalis, Phaff; CBS 5293, D. pinicola, California, U.S.A., do Carmo-Sousa. Type strain: CBS 5578 (ATCC 28680), isolated by Phaff.

440

Vc. Descriptions of anamorphic ascomycetous genera and species

from the genus. Since these authors considered the needle-shaped blastoconidia an important characteristic by which T aculeatum differed from previously described species, the new genus Aciculoconidium was introduced to accommodate T. aculeatum (King and Jong 1976a). Some comments on the type strain designated by King and Jong (1976a) have to be made. These authors stated in their publication that two subcultures of the type strain isolated from Drosophila pinicola were examined. However, the culture chosen by Phaff et al. (1956) as the type and labelled in the original publication as F-0145A had been isolated from Drosophila occidentalis (Phaff, personal communication). To this culture the number Fig. 200. A. aculeatum, CBS 5578. Hyphae in Dalmau plate culture on corn meal agar after 7 days at 25°C. Bar= 10 |im. CBS 5578 was assigned. The culture ATCC 1550-NRRL YB-4297 considered by King and Jong as an iso-type Comments on the genus strain is a subculture of Phaff's isolate from Drosophila pinicola (Kurtzman, personal communication). Since subKing and Jong (1976b) examined the process of arthroconidia formation in Trichosporon. On the basis of cultures of the authentic strain still exist, the strain CBS differences in this process they removed T. aculeatum 5578-ATCC 28680 is the type strain.

60. Arxula van der Walt, M.Th. Smith & Y. Yamada /M.Th. Smith

441

60. Arxula van der Walt, M.Th. Smith & Y. Yamada M.Th. Smith Diagnosis of the genus Asexual reproduction is by multilateral budding. Pseudohyphae, septate hyphae and arthroconidia are abundantly formed. Hyphae are narrow, not spreading, disarticulating into squat arthroconidia. Blastoconidia may be formed on very short denticles of hyphae. Colonies are restricted, dry, dull, white to cream-colored. Ascospores are not produced. Fermentation may be present. Nitrate is assimilated. Cultures are xerotolerant. Extracellular amyloid compounds are not produced. Septa have micropores. Diazonium blue B reaction is negative. Type species Arxula terrestris (van der Walt & E. Johannsen) van der Walt, M.Th. Smith & Y. Yamada Species accepted 1. Arxula adeninivorans (Middelhoven, Hoogkamer-Te Niet & Kreger-van Rij) van der Walt, M.Th. Smith & Y. Yamada (1990) 2. Arxula terrestris (van der Walt & E. Johannsen) van der Wah, M.Th. Smith & Y Yamada (1990) Key to species 1.

a Melibiose assimilated b Melibiose not assimilated

A. adeninivorans: p. 441 A. terrestris: p. 442

Systematic discussion of the species

Assimilation:

60.1. Arxula adeninivorans (Middelhoven, Hoogkamer-Te Niet & Kreger-van Rij) van der Walt, M.Th. Smith & Y. Yamada (1990c) Synonym: Trichosporon adeninovorans Middelhoven, Hoogkamer-Te Niet & Kreger-van Rij (1984)

Growth in glucose-yeast extract-peptone water: After 3 days at 25''C, budding cells are short-ovoidal to long-ovoidal, (2.2-3.6)x(2.4-5.6) |im. Branched, septate hyphae, 2.4 jim in diameter, and arthroconidia are also present. A sediment and a white, dry pellicle are formed. Growth on glucose-yeast extract-peptone agar: After one month the streak culture is yellowish-white, partly soft, partly tough and restricted. The edge is fringed with mycelium. Dalmau plate cultures on potato- and corn meal agar: True, branched, septate mycelium is abundantly formed. It may disarticulate into arthroconidia. Spheroidal or short-ovoidal blastoconidia occur in chains, sometimes on short denticles on the hyphae, but generally between, not at the septa. Aerial hyphae occur. Formation of endospores: Asexual, spheroidal to ovoidal, endospores of variable size and number (3-6), are observed on Difco malt agar. Fermentation: Glucose Galactose Sucrose Maltose

s s + s

Lactose Raffinose Trehalose

s s

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + s + + +

-

+ + + + + s +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + + +

-

+ + + + +

-

+ s + n +

-

Additional assimilation tests and other growth characteristics: 60% (w/w) glucoseyeast extract agar 0.1% Cycloheximide

+

Growth at 4 0 ^

+

+

Co-Q: 9 (van der Walt et al. 1990c). Mol% G + C: Not determined.

Origin of the strains studied: CBS 7350, ensiled whole-crop chopped maize, Netherlands, W.J. Middelhoven; CBS 7370, soil, CBS 7377, garden soil, South Africa, IP. van der Walt; CBS 7766, liver and intestines of Heloderma suspectum, Sweden, R. Mattson; CBS 8244, type strain of Trichosporon adeninovorans, soil, Netherlands, W.J. Middelhoven.

Vc. Descriptions of anamorphic ascomycetous genera and species

442

Type strain: CBS 8244, isolated by WJ. Middelhoven. 60.2. Arxula terrestris (van der Walt & E. Johannsen) van der Walt, M.Th. Smith & Y. Yamada (1990c) Synonyms: Trichosporon terrestre van der Walt & E. Johannsen (1975d) Geotrichum terrestre (van der Walt & E. Johannsen) Weijman (1979b)

Growth in glucose-yeast extract-peptone water: After 3 days at 25''C, branched, septate mycelium, (2.03.5) [im in diameter, arthroconidia and pseudomycelium are abundantly formed. Budding yeast cells are ovoidal, ellipsoidal to cylindrical, (2.5-6.5)x(3.0-11.0) jim, and occur singly, in pairs or small clusters (Fig. 201). A flocculent sediment and incomplete ring are present. Growth on glucose-yeast extract-peptone agar: After one month at 25^, the streak culture is cream-colored, dry, soft, restricted, raised and delicately wrinkled, with a lobate margin. Dalmau plate cultures on potato- and corn meal agar: Pseudomycelium, septate hyphae and arthroconidia are abundantly formed. Blastoconidia occur on the hyphae at the septa or in between, and may be single or in short chains. Arthroconidia vary in length, and may be short and spheroidal. Formation of endospores: Asexual endospores, which are formed by endoplasmic cleavage, were observed in old cultures on YM agar. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + s + + s + + + + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 60% (w/w) glucose+ Growth at 2>TC yeast extract agar Growth at 40''C 0.1% Cycloheximide + Co-Q: 9 (van der Walt et al. 1990c). Mol% G + C: Not determined.

+ -

Origin of the strains studied: CBS 278.86 (CBS

Fig. 201. A. terrestris, CBS 6697. Budding cells, pseudohyphae and septate hyphae. (After van der Walt and Johannsen 1975d.)

6697), grassland soil; CBS 7376, soil. South Africa, J.P. van der Walt. Type strain: CBS 278.86 (CBS 6697), isolated by J.P. van der Walt. Comments on the genus The genus Arxula was introduced by van der Walt et al. (1990c) to accommodate two arthroconidial, xerotolerant ascomycetous Trichosporon species, T. terrestre and T. adeninovorans of which the taxonomic position was unsettled. Weijman (1979b) revised the anamorphic arthroconidial genera Trichosporon and Geotrichum on the basis of whole-cell monosaccharide composition and restricted Trichosporon to basidiomycetous, arthroconidial anamorphs, and Geotrichum to ascomycetous, arthroconidial anamorphs. Consequently, T terrestre was reclassified as Geotrichum terrestre. In 1984, Middelhoven et al. described the ascomycetous species T adeninovorans with its uncommon ability to utilize certain purines (uric acid and adenine) as well as «-alkylamines («-butylamine and pentylamine) as sole sources of carbon and nitrogen, a property which is shared with G. terrestre. De Hoog et al. (1986), in their revision of Geotrichum, excluded G. terrestre from this genus on the basis of its scant production of septate hyphae and its extremely yeastlike appearance. On the basis of its nutritional profile, T adeninovorans was not transferred to Geotrichum by these authors. Since both species were excluded from Geotrichum, van der Walt et al. (1990c) followed the proposal of von Arx et al. (1977), and assigned T. terrestre and the related species to a new genus. Studies on molecular relationships among hyphal ascomycetous yeasts and yeastlike taxa were published by Yamada and Nogawa (1990a) and Kurtzman and Robnett (1995). From the data of both studies it can be concluded that the genus Arxula is closely related to the teleomorph genus Stephanoascus and might represent anamorphs of this genus.

443

61. Blastobotrys uon Klopotek / G.S. de Hoog and M.Th. Smith

61. Blastobotrys von Klopotek G.S. de Hoog and M.Th. Smith Diagnosis of the genus Colonies are restricted, dry, snow-white, and consist of compacted hyphae; budding cells are absent or present. Conidiophores are suberect, sympodial, and produce conidia in clusters on a rachis or alongside hyphae. Conidia are borne on pedicels or denticles, or are sessile. Primary conidia produce smaller, secondary conidia, either synchronously or sympodially in short, acropetal chains; primary conidia often bear setae. Septa have micropores. Teleomorph genus: Stephanoascus. Sugars are often fermented. Nitrate is not assimilated. Diazonium blue B reaction is negative. Type species Blastobotrys nivea von Klopotek Species accepted 1. Blastobotrys arbuscula de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) 2. Blastobotrys aristata Marvanova (1976) 3. Blastobotrys capitulata de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) 4. Blastobotrys elegans de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) 5. Blastobotrys gigas de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) (anamorph of Stephanoascus farinosus de Hoog, Rantio-Lehtimaki & M.Th. Smith) 6. Blastobotrys nivea von Klopotek (1967) 7. Blastobotrys proliferans Marvanova (1976) Key to species Morphological key to species: See Table 48. 1. 2(1). 3(2). 4(1). 5(4). 6(5). 7(6).

a b a b a b a b a b a

Setae present on primary conidia -^ 2 Setae absent from primary conidia -^ 4 Setae bearing new conidia similar to primary conidia, each with globose secondary conidia B. proliferans: Setae sterile -^ 3 Few primary conidia united on pedicels B. aristata: Primary conidia clustered, sessile B. capitulata: Primary conidia formed on long, geniculate rachis B. niuea: Primary conidia formed terminally in groups on poorly differentiated cells -^ 5 Initial growth yeastlike -^ 6 Budding cells absent B. elegans: Primary conidia nearly globose, 4-6 |im diameter; secondary conidia globose; conidial apparatus stiff, poorly branched B. arbuscula: b Combination of preceding characters not found -^ 7 a Primary conidia barely different from secondary conidia, 2-3 [im wide anamorph of Stephanoascus ciferrii: b Primary conidia inflated, 3-6 ^xm wide B. gigas, anamorph of Stephanoascus farinosus:

p. 447 p. 444 p. 445 p. 446 p. 446 p. 444 p. 400 p. 446

Physiological key to species: 1. 2(1). 3(2). 4(3). 5(1).

a b a b a b a b a b

Growth at 37T -^ 2 Growth absent at 37°C -^ 5 Fermentation of raflfinose Raffinose not fermented -^ 3 Fermentation of glucose —> 4 Glucose not fermented Melibiose assimilated Melibiose not assimilated Fermentation of glucose -^6 Glucose not fermented

B. proliferans:

p. 447

S. ciferrii: p. 400 B. nivea: p. 446 B. capitulata: p. 445 B. elegans:

p. 446

444 6(5).

Vc. Descriptions of anamorphic ascomycetous genera and species a Sucrose assimilated b Sucrqse not assimilated

B. aristata: B. arbuscula, anamorph of Stephanoascus farinosus:

p. 444 p. 444

Table 48 Key characters of species in the genus Blastobotrys Species

Assimilation

Fermentation Glucose

Raffinose Raffinose

+ + +

-

Blastobotrys arbuscula B. aristata B. capitulata B. elegans B. nivea B. proliferans

-

+ +

Sucrose

Melibiose

D-Arabinose

L-Rhamnose

Assimilation:

61.1. Blastobotrys arbuscula de Hoog, RantioLehtimaki & M.Th. Smith (1985) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22''C, colonies are 1 mm in diameter, butyrous, and cream-colored. Budding cells are abundant and in coherent chains, composing star-shaped pseudomycelial microcolonies. Hyphae are hyaline, straight and stiff, 2.5-3.5 [im wide, and with clusters of minute conidium-bearing denticles at the apex and just below distal septa. Primary conidia are broadly ellipsoidal to subglobose, about 4-6 |im wide, without setae and produce densely crowded, globose secondary conidia, 2.5-3.5 jim diameter, in more or less synchronous order (Fig. 202).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Fermentation: + +

-

Salicin

Inositol

+

Systematic discussion of the species

Glucose Galactose Sucrose Maltose

Ethanol

Growth at 37"C

Lactose Raffinose Trehalose

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Growth at 37°C Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strain studied: CBS 227.83, from house air, Tunnela, Finland. Type strain: CBS 227.83. Comments: The species is close to B. gigas de Hoog et al. (1985), which was recently reported to have a teleomorph similar to Stephanoascus farinosus de Hoog et al. (Traquair et al. 1988a). These taxa may belong to a single, psychrophilic, homothallic species, S. farinosus, which would be more variable in its morphological and physiological characters than was originally reported (de Hoog et al. 1985). Genomic studies are needed to clarify this matter. 61.2. Blastobotrys aristata Marvanova (1976) Fig. 202. B. arbuscula, CBS 227.83. Conidiophores with primary and secondary conidia and initial growth with multilateral budding. MEYA, 2 2 T , 10 days.

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 10 mm in diameter, dry, farinose, snow-white and consist of compact

445

61. Blastobotrys uon Klopotek / G.S. de Hoog and M.Th. Smith

Comments: Physiological characteristics are often difficult to judge because of formation of hyphal clumps. Primary conidia are borne on long, tapering pedicels which are formed singly or in small groups at the apex of conidiophores. 61.3. Blastobotrys capitulata de Hoog, RantioLehtimaki & M.Th. Smith (1985)

Fig. 203. B. aristata, CBS 521.75. Conidiophore tips with primary conidium initials and primary conidia with secondary conidia and setae. MEYA, 2 2 T , 10 days.

mycelium; budding cells are often absent. Hyphae are hyaline and 2-3 \km wide. Conidiophores are ascending, up to lOOfim long and bear 1-3 conidia at the apex; each is borne on a 2-A\mi long denticle. Primary conidia are pear-shaped, (3-8) x (4.5-9.0) jim, with 12 sterile setae and bear synchronously produced, densely crowded, globose secondary conidia of 1.5-3.5 |im diameter (Fig. 203). Fermentation: Glucose Galactose Sucrose Maltose

+ v +

Lactose Raffinose Trehalose

+

+ + + + + + + + v v V + + + + + v +

A'^-Acetyl-D-glucosamine TV-Acetyl-D-glucosamme Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics:

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 5 mm in diameter, snow-white, dry, and evenly farinose. Budding cells are absent; hyphae are hyaline and 2.5-3.5 jim wide. Conidia are sessile and produced in dense clusters at the apex of poorly differentiated cells. Primary conidia are obovoidal, 5xlOjim, and bear 1-2 sterile, flexuose setae 0.5 |im wide and up to 200 |im long. Secondary conidia are synchronously produced in dense packets on primary conidia; they are hygrophobic, globose and 2.5-3.5 (im in diameter. Similar conidia are produced alongside the hyphae (Fig. 204). Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + + + + + + + + n + v + n -

Additional assimilation tests and other growth characteristics: Growth at 3 7 T + Co-Q: Not determined. Mol% G + C: Not determined.

Growth at 3 7 T Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strain studied: CBS 287.82, from rotting Euphorbia ingens, van der Walt, South Africa; from straw. Type strain: CBS 287.82.

Origin of the strain studied: CBS 521.75, from moldy plaster, Marvanova, Czechoslovakia. Type strain: CBS 521.75.

Comments: The closely aggregated, sessile primary conidia that bear very thin, flexuose, sterile setae are characteristic of this species.

446

Vc. Descriptions of anamorphic ascomycetous genera and species

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

-

+ + + +

V V

+ V

-

+

V

//-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + + + + V

+ +

V

n

-

+ V

n

-

Additional assimilation tests and other growth characteristics: Fig. 204. B. capitulata, CBS 287.82. Conidiophores with terminal groups of primary conidia bearing secondary conidia, primary conidia with secondary conidia and setae, and sessile conidia on hyphae. MEYA, 22T, 10 days.

Growth at 37T Co-Q: Not determined. MoI% G + C: Not determined.

61.4. Blastobotrys elegans de Hoog, RantioLehtimaki & M.Th. Smith (1985)

Origin of the strain studied: CBS 530.83, from house air, Rantio-Lehtimaki, Finland. Type strain: CBS 530.83.

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 3-5 mm in diameter, cerebriform, whitish and in later stages with snow-white, farinose patches. Budding cells are mostly absent; hyphae are hyaline, 2-3 \xm wide. Conidia are formed on loose apical clusters of cylindroidal denticles, that are up to 3 |im long. Primary conidia are subglobose, (2.8^.2) |im wide, without setae and densely crowded with globose, synchronously formed secondary conidia that are (1.8-3.4) |im in diameter (Fig. 205). Fermentation: absent.

Comments: The species is recognizable by the absence of yeastlike growth and by a grape-like arrangement of conidia which do not easily separate. 61.5. Blastobotrys gigas de Hoog, Rantio-Lehtimaki & M.Th. Smith (1985) See under teleomorph: Stephanoascus farinosus de Hoog, Rantio-Lehtimaki & M.Th. Smith: p. 401. 61.6. Blastobotrys nivea von Klopotek (1967) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 14 mm in diameter, dry, farinose, somewhat folded, snow-white and consist of compact mycelium; budding cells are absent. Hyphae are hyaline and (2-3) |im wide. Conidiophores are ascending, up to 230 |im high and the apical parts have distant geniculations with cylindrical denticles at the edges. Primary conidia are globose, (2.5-4.5) |im wide, without setae, and synchronously produce globose, densely crowded secondary conidia that are (2.0-2.5) |im in diameter (Fig. 206). Fermentation:

Fig. 205. B. elegans, CBS 530.83. Conidiophores with and without clusters of primary conidia which bear secondary conidia; denticles remain after detachment. MEYA, 22°C, 10 days.

Glucose Galactose Sucrose Maltose

+ +

-

+

Lactose Raffinose Trehalose

447

61. Blastobotrys von Klopotek / G.S. de Hoog and M.Th. Smith

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22T, the colonies are 10 mm in diameter, dry, thinly hairy, soft and snow-white; budding cells are absent. Hyphae are hyaline, and (1.5-2.5) jim wide. Conidiophores are ascending, up to 80|im long, and barely different from the remaining hyphae; apically, they produce 1-3 pedicels up to 5jim long bearing conidia. Primary conidia are pear-shaped, about (3.0-4.5)x(4.58.0) (im, contain a refractive granular body, and bear a seta which again produces 1-3 similar conidia at its apex. The primary conidia synchronously produce densely crowded globose secondary conidia that are 1.5-2.5 |im in diameter (Fig. 207). Fermentation:

10 ^m

Fig. 206. B. nivea, CBS 163.67. Conidiophores with primary conidia bearing secondary conidia. MEYA, 22°C, 10 days.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafifinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Growth at 37''C + Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strain studied: CBS 163.67 (ATCC 18420), from compost, Germany, von Klopotek. Type strain: CBS 163.67. Comments: Physiological characteristics are often difficult to judge because of formation of hyphal clumps. Morphologically, the species is recognized by slender conidiophores with a long geniculate rachis. Conidia are borne on widely spaced cylindroidal denticles. 61.7. Blastobotrys proliferans Marvanova (1976) Synonym: Blastobotrys navarrensis Sesma & C. Ramirez (1978)

Fig. 207. B. proliferans, CBS 522.75. Conidiophores and primary conidia bearing secondary conidia and setae, endoconidia in hyphae, and intercalary chlamydospores. MEYA, 22''C, 10 days.

448

Vc. Descriptions of anamorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

on morphological criteria. However, members of Blastobotrys, as well as some Sporothrix species, were shown to have micropores in their septa (Smith and BatenburgGrowth at 37T + Co-Q: Not determined. van der Vegte 1985, 1986b), coenzyme Q-9 systems Mol% G + C: Not determined. (Suzuki and Nakase 1986, Yamada and Smith 1985), and Origin of the strains studied: CBS 522.75, from occasionally a Stephanoascus teleomorph (Smith et al. a mite-infested nut, Brazil; CBS 139.77, type strain of 1981, de Hoog et al. 1985). Consequently, Blastobotrys is B. navarrensis, from black pepper, Spain; from soil (1); maintained here for saccharomycetous fungi and treated from man (1); from house dust (1); from linoleum (1). under the yeasts, while Sporothrix should be reserved for Type strain: CBS 522.75. anamorphs of the Ophiostomatales (de Hoog 1992). Species delimitation in the genus has not yet been Comments: Key features are the primary conidia which contain granular, highly refractive bodies and the setae satisfactorily established. Most species are known from a which bear new, similar conidia. single strain. The taxonomic value of morphological and physiological criteria has to be evaluated on the basis of Comments on the genus teleomorphs and genomic data. To this end, Kurtzman Budding cells are usually absent or in low abundance and Robnett (1995) showed from nucleotide sequence when present. Until recently, the genus was treated as a analysis of 5' end large subunit rDNA that species of hyphomycete, close to the ascomycetous genus Sporothrix Blastobotrys are members of a clade that includes Arxula, Hektoen & Perkins, from which it was distinguished Sympodiomyces and Stephanoascus (Fig. 170, p. 385).

62. Botryozyma Shann & M.Th. Smith /M.Th. Smith

449

62. Botryozyma Shann & M.Th. Smith M.Th. Smith Diagnosis of the genus Asexual reproduction is by multilateral budding. Cells are cylindrical. Pseudohyphae are formed. Terminal pseudohyphal cells are transformed into simple or complex appressoria. Ascospores are not formed. Sugars are not fermented. Nitrate is not assimilated. Urease is not produced. Diazonium blue B reaction is negative. Type species Botryozyma nematodophila Shann & M.Th. Smith Species accepted Botryozyma nematodophila Shann & M.Th. Smith (1992) Systematic discussion of the species

Fermentation: absent.

62.1. Botryozyma nematodophila Shann & M.Th. Smith (Smith et al. 1992) Growth in glucose-yeast extract-peptone water: After 3 days at 25T, the cells are cylindrical, (8.022.5)X(2.0-5.5) ^m, reproduce predominantly in the apical zone and occur in pairs and short chains, but mainly in pseudomycelial elements; fusiform cells may be present. End cells are usually transformed into simple or complex branch-like structures (appressoria), (2.020.0)x(l.0-2.0)[im (Fig. 208). A sediment is formed.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

-

+ +

-

+ +

-

n

-

Additional assimilation tests and other growth characteristics:

Fig. 208. B. nematodophila, CBS 7426. Budding cells, pseudohyphae and appressoria in glucose-peptone-yeast extract after 3 days at 25°C. Bar = 5^m.

Growth on glucose-yeast extract-peptone agar: After 3 days at 25°C, the cells are similar in shape and size as in glucose-yeast extract-peptone water. Appressorial cells are present. The streak culture is cream-colored, dull, delicately wrinkled, butyrous, and the margin slightly lobed. Dalmau plate cultures on glucose-yeast extractpeptone agar: After 3 days at 25T, a well-developed pseudomycelium is formed. Fusiform cells may be present, and simple as well as complex appressoria are formed.

Starch formation Growth at 37°C + 0.1% Cycloheximide + Co-Q: Not determined. Mol% G + C: 29.5, CBS 7426; 29.7, CBS 7442 (7^: Smith et al. 1992).

Origin of the strains studied: CBS 7426, CBS 7442, from Panagrellus zymosiphilus in sour rot of grapes, Italy, C. Shann. Type strain: CBS 7426, isolated by C. Shann. Comments on the genus The monotypic genus Botryozyma was introduced by Smith et al. (1992) to accommodate two yeast isolates found along with nematodes in and on damaged grapes. According to Shann (1988), the species is a saprophyte on the nematode Panagrellus zymosiphilus, to which it may be attached by appressoria.

450

Vc. Descriptions of anamorphic ascomycetous genera and species

63. Brettanomyces Kufferath & van Laer M.Th. Smith Diagnosis of the genus Asexual reproduction is either by multilateral budding or, rarely, by bipolar budding in basipetal succession on a narrow base. Cells are either spheroidal, subglobose to ellipsoidal, frequently ogival, or cylindroidal to elongate. Pseudomycelium is simple or well-developed, and branched. One-celled, non-septate mycelium may be formed. Cultures grow slowly and are usually short-lived. Acetic acid is produced aerobically from glucose. Fermentation is usually stimulated by molecular oxygen. An extraneous vitamin source is required. Diazonium blue B reaction is negative. The teleomorphic genus is Dekkera. Type species Brettanomyces bruxellensis Kufferath & van Laer Species accepted 1. Brettanomyces anomalus Custers (1940): see Dekkera anomala 2. Brettanomyces bruxellensis Kufferath & van Laer (1921): see Dekkera bruxellensis 3. Brettanomyces custersianus van der Walt (1961) 4. Brettanomyces naardenensis Kolfschoten & Yarrow (1970) 5. Brettanomyces nanus (M.Th. Smith, Batenburg-van der Vegte & Scheffers) M.Th. Smith, Boekhout, Kurtzman & O'Donnell (1994) Key to species See Table 49. 1. 2(1). 3(1).

a D-Glucitol assimilated -^ 2 b D-Glucitol not assimilated -^ 3 a Succinate assimilated B. naardenensis: b Succinate not assimilated B. nanus: Species with the following combinations of characters: a Slender, often branched, non-septate filaments are produced on dalmau plates; lactose fermented by most strains; succinate latently assimilated by most strains; galactose assimilated Dekkera anomala: b Non-septate filaments are not produced; lactose not fermented; succinate not assimilated; galactose assimilation variable D. bruxellensis: c Non-septate filaments are not produced; lactose not fermented; succinate assimilated; galactose not assimilated B. custersianus:

p. 451 p. 452

p. 174 p. 175 p. 451

Table 49 Key characters of species in the genus Brettanomyces and its teleomorph Dekkera

Lactose fermentation

Galactose

Dekkera anomala

v

+

-

D. bruxellensis

-

v

-

Brettanomyces custersianus

_

_

_

Species

Assimilation Glucitol

B. naardenensis

-

+

+

B. nanus

-

+

+

Succinate

Non-septate filaments

63. Brettanomyces Kufferath & van Laer / M. Th. Smith

Assimilation:

Systematic discussion of the species 63.1. Brettanomyces anomalus Custers (1940) See teleomorph: Dekkera anomala M.Th. Smith & van Grinsven: p. 174. 63.2. Brettanomyces bruxellensis Kufferath & van Laer (1921) See teleomorph: Dekkera bruxellensis van der Walt: p. 175. 63.3. Brettanomyces custersianus van der Walt (1961)

Synonym: Dekkera custersiana F.-L. Lee & S.-C. Jong (1986a)

Growth in malt extract: After 5 days at 25''C, the cells are ellipsoidal, frequently ogival and cylindroidal to elongate, (1.5-3.5)x(2.0-19.0)jim. Cells reproduce by budding, and occur singly, in pairs or in short, occasionally somewhat branched chains. Pseudomycelium is produced. A floccose sediment is formed. A thin, dull pellicle or a slight, frequently incomplete ring is sometimes present. Growth on malt agar+ 2% calcium carbonate: After 6 weeks at room temperature, the streak culture is raised, cream-colored to light brown, shiny to dull, verrucose, and crispulate or rugose. The margin is undulating to lobiform. Acetic acid production is slight. Dalmau plate cultures on potato-, rice- and morphology agars: Pseudomycelium is abundantly produced and consists of filamentous cells with few or no blastospores. Blastospores are more abundant under anaerobic conditions, and are arranged in short chains or weakly branched verticils (Fig. 209). Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

v

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + -

451

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + n -

Additional assimilation tests and other growth characteristics:

Growth at 35°C + Starch formation Growth at 37T + 0.01% Cycloheximide + 0.1% Cycloheximide s Co-Q: 9 (Yamada et al. 1980, Billon-Grand 1987). Mol% G + C: 38.9-39.3, 4 strains, CBS 4805, CBS 4806, CBS 5207, CBS 5208 (r^: Smith et al. 1990b).

Origin of the strain studied: CBS 4805, CBS 4806, CBS 5207, CBS 5208, equipment at a Bantu beer brewery, South Africa, van der Walt. Type strain: CBS 4805 (ATCC 34446), isolated by van der Walt. 63.4. Brettanomyces naardenensis Kolfschoten & Yarrow (1970) Synonym: Dekkera naardenensis S.-C. Jong & F.-L. Lee (1986)

Growth in malt extract: After 5 days at 25°C, the cells are predominantly cylindroidal to elongate, rarely ellipsoidal or ogival, (1.5-4.5)x(4.0-15.0-30) jim, and reproduce by budding. They occur singly, in pairs or in short chains or small clusters. Pseudomycelium is abundant. Floccose sediment is formed; occasionally a slight, incomplete ring and islets are present. Growth on malt agar+ 2% calcium carbonate: After 6 weeks at room temperature, the streak culture is rather coherent, creamish-brown to light brown, somewhat shiny to rather dull, and pulvinate to verruculose. The margin is lobate. Acetic acid production is not very pronounced. Dalmau plate cultures on potato-, rice- and morphology agars: A ramified pseudomycelium is produced that bears few or no blastospores. Pseudomycelium is better developed under anaerobic conditions. Fermentation:

Fig. 209. B. custersianus, CBS 4805. Pseudomycelium on corn meal agar after 10 days at 25°C (fi-om van der Walt 1970e). Bar = 5 |im.

Glucose Galactose Sucrose Maltose

s w/-

-

Lactose Raffinose Trehalose

Vc. Descriptions of anamorphic ascomycetous genera and species

452

Assimilation: A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Fig. 210. 5. nanus, CBS 1956. Pyriform cells in glucose-yeast extractpeptone water after 3 days at 2 5 T . Bar= 10|im.

Fermentation:

Additional assimilation tests and other growth characteristics: Starch formation 0.01% Cycloheximide

+

0.1% Cycloheximide Growth at 35°C

+

Co-Q: 9 (Yamada et al. 1980, Billon-Grand 1987). Mol% G + C: 42.2-43.3, 3 strains, CBS 6042, CBS 6107, CBS 6117 {T^: Smith etal. 1990b).

Origin of the strains studied: CBS 6042, lemonade, Netherlands, G.A. Kolfschoten; CBS 6040, soda water, U.S.A., D.G. Ahearn; the following were isolated by G.A. Kolfschoten: CBS 6041, carbonated lemonade pH2.7, Belgium; CBS 6043, carbonated tonic water pH3, Netherlands; CBS 6107, carbonated lemonade pH3.1, Norway; CBS 6115, carbonated soft drink pH2.7, Netherlands; CBS 6117, carbonated lemonade pH3, Denmark; CBS 6118, carbonated lemonade, Netherlands. Type strain: CBS 6042 (ATCC 22075). 63.5. Brettanomyces nanus (M.Th. Smith, Batenburg-van der Vegte & Scheffers) M.Th. Smith, Boekhout, Kurtzman & O'Donnell (Boekhout et al. 1994) Synonyms: Brettanomyces nanus Scheffers (1966) nom. inval. Eeniella nana M.Th. Smith, Batenburg-van der Vegte & Scheffers (1981)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are usually ogival to apiculate, (1.8^.5)x(2.2-7.5)(im, seldom spheroidal or cylindroidal, single, or in pairs. Pear-shaped cells are sometimes present (Fig. 210). After 1 month, sediment is formed. Growth on malt agar+ 2% calcium carbonate: After 1 month, the streak culture is white to cream-colored, smooth, and glossy; in cross-section, the colony shows a slightly raised center and a flat periphery. Dalmau plate cultures on potato-, rice- and corn meal agars: Simple pseudohyphae consisting of short chains of cells are occasionally present.

Glucose Galactose Sucrose Maltose

+ s -

Lactose Raffinose Trehalose

+ + + V V

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

V + -

n + + + + n -

Additional assimilation tests and other growth characteristics: Starch formation 0.01% Cycloheximide

+

0.1% Cycloheximide Growth at 3 5 T

-

Co-Q: 9 (Yamada et al. 1980). MoI% G + C: 40.2-41.4, 3 strains, CBS 1945, CBS 1955, CBS 1956 {T^\ Smith etal. 1981).

Origin of the strains studied: CBS 1945, bottled beer, brewery, Kalmar, Sweden, G. Een; CBS 1955, bottled beer, brewery, Stockholm, Sweden, G. Een; CBS 1956, bottled beer, brewery, Goteborg, Sweden, G. Een. Type strain: CBS 1945 (ATCC 48014). Comments: Brettanomyces nanus was introduced by Scheffers (1966) without a Latin diagnosis. Smith et al. (1981) examined the three available isolates and found bipolar budding. On the basis of this morphological feature and the physiological property of acetic acid production. Smith et al. (1981) considered it incorrect to classify these isolates in Brettanomyces or in any other extant genus with bipolar budding. Therefore, they

63. Brettanomyces Kufferath & uan Laer / M. Th. Smith

introduced the genus Eeniella to accommodate these apiculate, acetic acid-producing strains. However, on the basis of partial 26S rDNA sequence data, Boekhout et al. (1994) considered Eeniella a synonym of Brettanomyces and consequently reintroduced and validated the species B. nanus. Comments on the genus For a detailed historical account of the genus Brettanomyces, see Custers (1940) and van der Wah (1970e, 1984c). Fiol and Billon-Grand (1978b) studied the production of intracellular oxidases, nitrite and nitrate reductases in Brettanomyces and Dekkera and discussed the relationship between the two genera. The coenzyme Q systems were studied by Yamada et al. (1980) and BillonGrand (1987); the latter author stressed the importance of minor ubiquinones in the classification of both genera. In addition to the major component Co-Q 9, Co-Q 8 was found as a minor component in all Brettanomyces and Dekkera species. Traces of Co-Q 7 and Co-Q 6 were found

453

in a few species. A series of publications appeared on ascospore formation in type strains of five Brettanomyces species (Lee and Jong 1985, 1986a,b, Jong and Lee 1986); as a consequence, these species were reclassified in the teleomorphic genus Dekkera. The presence of ascospores was demonstrated by staining. However, Smith et al. (1990b) considered the hat-shaped spores to be artifacts that may have resulted from contraction of cellular cytoplasm during staining. Therefore, Smith et al. (1990b) did not accept the species D. custersianus and D. naardenensis. On the basis of DNA reassociations and enzyme comparisons. Smith et al. (1990b) accepted four species in Brettanomyces, two of which lack a teleomorphic state. Various studies of mtDNA (McArthur and Clark-Walker 1983, Hoeben and Clark-Walker 1986, Clark-Walker et al. 1987, Hoeben et al. 1993), rRNA (Molina et al. 1993), rDNA (Boekhout et al. 1994) and rRNA (Yamada et al. 1994d) have been performed on Brettanomyces and the teleomorph Dekkera (see Dekkera, Comments on the genus).

454

Vc. Descriptions of anamorphic ascomycetous genera and species

64. Candida Berkhout S.A. Meyer, R.W. Payne and D. Yarrow Diagnosis of the genus Cells are globose, ellipsoidal, cylindroidal, or elongate, occasionally ogival, triangular or lunate. Reproduction is by holoblastic budding. Pseudohyphae and septate hyphae may be formed. The cell wall is ascomycetous and two-layered. Arthroconidia and ballistoconidia are not formed. Starch-like compounds are not produced. Diazonium blue B reaction is negative. Xylose, rhamnose and fucose are not present in cell hydrolyzates. Type species Candida vulgaris Berkhout [synonym of Candida tropicalis (Castellani) Berkhout] Species accepted 1. Candida 2. Candida 3. Candida 4. Candida 5. Candida 6. Candida 7. Candida 8. Candida 9. Candida 10. Candida 11. Candida 12. Candida 13. Candida 14. Candida 15. Candida 16. Candida 17. Candida 18. Candida 19. Candida 20. Candida 21. Candida 22. Candida 23. Candida 24. Candida 25. Candida 26. Candida 27. Candida 28. Candida 29. Candida 30. Candida 31. Candida 32. Candida 33. Candida 34. Candida 35. Candida 36. Candida 37. Candida 38. Candida 39. Candida 40. Candida 41. Candida

aaseri Dietrichson ex van Uden & H.R. Buckley (1970) albicans (Robin) Berkhout (1923) amapae Morals, Rosa, S.A. Meyer, Mendonga-Hagler & Hagler (1995) anatomiae (Zwillenberg) S.A. Meyer & Yarrow 1978 ancudensis C. Ramirez & A. Gonzalez (1984) antillancae C. Ramirez & A. Gonzalez (1984) apicola (Hajsig) S.A. Meyer & Yarrow (1978) apis (Lavie ex van Uden & Vidal-Leiria) S.A. Meyer & Yarrow (1978) atlantica (Siepmann) S.A. Meyer & Simione ex S.A. Meyer & Yarrow (1998) atmosphaerica Santa Maria (1959) auringiensis Santa Maria (1978) austromarina (Fell & I.L. Hunter) S.A. Meyer & Yarrow (1978) azyma (van der Walt, E. Johannsen & Yarrow) S.A. Meyer & Yarrow (1978) beechii H.R. Buckley & van Uden (1968) bertae C. Ramirez & A. Gonzalez (1984) berthetii Boidin, Pignal, Mermier & Arpin (1963) blankii H.R. Buckley & van Uden (1968) boidinii C. Ramirez (1953) boleticola Nakase (1971) bombi Montrocher (1967) bombicola (J.F.T. Spencer, Gorin & Tulloch) S.A. Meyer & Yarrow (1978) buinensis Soneda & S. Uchida (1971) butyri Nakase (1971) cantarellii (van der Walt & van Kerken) S.A. Meyer & Yarrow (1978) caseinolytica Phaff, Starmer, Lachance & Ganter (1994) castellii (Capriotti) S.A. Meyer & Yarrow (1978) castrensis C. Ramirez & A. Gonzalez (1984) catenulata Diddens & Lodder (1942) chilensis Grinbergs & Yarrow (1970) chiropterorum Grose & Marinkelle (1968) coipomoensis C. Ramirez & A. Gonzalez (1984) conglobata (Redaelli) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) cylindracea K. Yamada & Machida ex S.A. Meyer & Yarrow (1998) dendrica (van der Wah, van der Klift & D.B. Scott) S.A. Meyer & Yarrow (1978) dendronema van der Walt, van der Klift & D.B. Scott (1971) diddensiae (Phaff, Mrak & Williams) Fell & S.A. Meyer ex S.A. Meyer & Ahearn (1983) diversa Y Ohara, Nonomura & Yunome ex van Uden & H.R. Buckley (1970) drimydis C. Ramirez & A. Gonzalez (1984) edax van der Walt & E.E. Nel (1968): see Stephanoascus smithiae, p. 402 entomophila D.B. Scott, van der Walt & van der Klift (1971) ergastensis Santa Maria (1971)

64. Candida Berkhout / S.A. Meyer et al

455

42. Candida ernobii (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (1978) 43. Candida etchellsii (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (1978) 44. Candida ethanolica Rybafova, Stros & Kockova-Kratochvilova (1980) 45. Candida famata (EC. Harrison) S.A. Meyer & Yarrow (1978) a. Candida famata (EC. Harrison) S.A. Meyer & Yarrow war. famata (1985): see Debaryomyces hansenii var. hansenii, p. 161 b. Candida famata vsiv.flareri (Ciferri & Redaelli) Nakase & M. Suzuki (1985): see Debaryomyces hansenii var. fabryi, p. 162 46. Candida fennica (Sonck & Yarrow) S.A. Meyer & Ahearn (1983) 47. Candida fermenticarens van der Walt & RB. Baker (1978) 48. Candida floricola Tokuoka, Ishitani, S. Goto & Komagata (1987) 49. Candida fluviatilis Hedrick (1976) 50. Candida freyschussii H.R. Buckley & van Uden (1968) 51. Candida friedrichii van Uden & Windisch (1968) 52. Candida fructus (Nakase) S.A. Meyer & Yarrow (1978) 53. Candida galacta (Golubev & Bab'eva) F.-L. Lee, C.-E Lee, Okada, Komagata & Kozak (1993) 54. Candida geochares (van der Walt, E. Johannsen & Yarrow) S.A. Meyer & Yarrow (1978) 55. Candida glabrata (H.W Anderson) S.A. Meyer & Yarrow (1978) 56. Candida glaebosa Komagata & Nakase (1965) 57. Candida glucosophila Tokuoka, Ishitani, S. Goto & Komagata (1987) 58. Candida gropengiesseri (EC. Harrison) S.A. Meyer & Yarrow (1978) 59. Candida guilliermondii (Castellani) Berkhout (1923) a. Candida guilliermondii (Castellani) Berkhout var. guilliermondii (1952): see Pichia guilliermondii, p. 308 b. Candida guilliermondii var. membranifaciens Lodder & Kreger-van Rij (1952): see Pichia ohmeri, p. 329 60. Candida haemulonii (van Uden & Kolipinski) S.A. Meyer & Yarrow (1978) 61. Candida homilentoma van der Walt & Nakase (1973) 62. Candida humilis (E.E. Nel & van der Walt) S.A. Meyer & Yarrow (1978) 63. Candida incommunis Y Ohara, Nonomura & T. Yamazaki (1965) 64. Candida inconspicua (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (1978) 65. Candida insectalens (D.B. Scott, van der Walt & van der Klift) S.A. Meyer & Yarrow (1978) 66. Candida insectamans D.B. Scott, van der Walt & van der Klift (1972) 67. Candida insectorum D.B. Scott, van der Walt & van der Klift (1972) 68. Candida intermedia (Ciferri & Ashford) Langeron & Guerra (1938) 69. Candida ishiwadae Sugiyama & S. Goto (1969) 70. Candida karawaiewii Yarrow & S.A. Meyer (1978) 71. Candida krissii S. Goto & lizuka (1974) 72. Candida kruisii (Kockova-Kratochvilova & Ondrusova) S.A. Meyer & Yarrow (1978) 73. Candida krusei (Castellani) Berkhout (1923): see Issatchenkia orientalis, p. 222 74. Candida lactis-condensi (B.W Hammer) S.A. Meyer & Yarrow (1978) 75. Candida laureliae C. Ramirez & A. Gonzalez (1984) 76. Candida lipolytica (EC. Harrison) Diddens & Lodder (1942): see Yarrowia lipolytica, p. 420 77. Candida llanquihuensis C. Ramirez & A. Gonzalez (1984) 78. Candida lusitaniae van Uden & do Carmo-Sousa (1959): see Clauispora lusitaniae, p. 148 79. Candida lyxosophila van der Walt, N.R Eerreira & Steyn (1987) 80. Candida magnoliae (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (1978) 81. Candida maltosa Komagata, Nakase & Katsuya (1964) 82. Candida maris (van Uden & Zobell) S.A. Meyer & Yarrow (1978) 83. Candida maritima (Siepmann) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) 84. Candida melibiosica H.R. Buckley & van Uden (1968) 85. Candida membranifaciens (Lodder & Kreger-van Rij) Wickerham & K.A. Burton (1954) 86. Candida mesenterica (A. Geiger) Diddens & Lodder (1942) 87. Candida methanosorbosa (Abe & Yokote) J.A. Barnett, R.W Payne & Yarrow (1983) 88. Candida milleri Yarrow (1978) 89. Candida mogii Vidal-Leiria (1967) 90. Candida montana S. Goto & Oguri (1983) 91. Candida multigemmis (Buhagiar) S.A. Meyer & Yarrow (1978)

456

Vc. Descriptions of anamorphic ascomycetous genera and species

92. Candida musae (Nakase) S.A. Meyer & Yarrow (1978) 93. Candida naeodendra van der Walt, E. Johannsen & Nakase (1973) 94. Candida nanaspora Saez & Rodrigues de Miranda (1988) 95. Candida natalensis van der Walt & Tscheuschner (1957) 96. Candida nemodendra (van der Walt, van der Klift & D.B. Scott) S.A. Meyer & Yarrow (1978) 97. Candida nitratophila (Shifrine & Phaff) S.A. Meyer & Yarrow (1978) 98. Candida norvegica (Reiersol) S.A. Meyer & Yarrow (1978) 99. Candida odintsovae Bab'eva, Reshetova, Blagodatskaya & Galimova (1989) 100. Candida oleophila Montrocher (1967) 101. Candida oregonensis Phaff & do Carmo-Sousa (1962) 102. Candida ovalis Kumamoto & Yamamoto (1986) 103. Candida palmioleophila Nakase & M. Itoh (1988) 104. Candida paludigena Golubev & Blagodatskaya (1981) 105. Candida parapsilosis (Ashford) Langeron & Talice (1932) 106. Candida pararugosa Nakase, Komagata & Fukazawa (1978) 107. Candida peltata (Yarrow) S.A. Meyer & Ahearn (1983) 108. Candida petrohuensis C. Ramirez & A. Gonzalez (1984) 109. Candida pignaliae (F.H. Jacob) S.A. Meyer & Yarrow (1978) 110. Candida pini (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (1978) 111. Candidapopuli Hagler, Mendonga-Hagler & Phaff (1989) 112. Candida pseudointermedia Nakase, Komagata & Fukazawa (1976) 113. Candida pseudolambica M.Th. Smith, Poot & Kull (1989) 114. Candida psychrophila (S. Goto, Sugiyama & lizuka) S.A. Meyer & Yarrow (1978) 115. Candida pulcherrima (Lindner) Windisch (1940): see Metschnikowia pulcherrima, p. 264 116. Candida quercitrusa (van Uden & do Carmo-Sousa) S.A. Meyer & Phaff ex S.A. Meyer & Yarrow (1998) 117. Candida quercuum Nakase (1971) 118. Candida railenensis C. Ramirez & A. Gonzalez (1984) 119. Candida reukaufii (Griiss) Diddens & Lodder (1942): see Metschnikowia reukaufii, p. 265 120. Candida rhagii Jurzitza, Kiihlwein & Kreger-van Rij (1960) 121. Candida rugopelliculosa Nakase (1971) 122. Candida rugosa (H.W Anderson) Diddens & Lodder (1942) 123. Candida saitoana Nakase & M. Suzuki (1985) 124. Candida sake (Saito & Oda) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) 125. Candida salmanticensis (Santa Maria) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) 126. Candida santamariae Montrocher (1967) 127. Candida santjacobensis C. Ramirez & A. Gonzalez (1984) 128. Candida savonica Sonck (1974) 129. Candida schatavii (Kockova-Kratochvilova & Ondrusova) S.A. Meyer & Yarrow (1978) 130. Candida sequanensis Saez & Rodrigues de Miranda (1984) 131. Candida shehatae H.R. Buckley & van Uden (1967) a. Candida shehatae H.R. Buckley & van Uden var. shehatae (1990) b. Candida shehatae var. insectosa Kurtzman (1990) c. Candida shehatae var. lignosa Kurtzman (1990) 132. Candida silvae Vidal-Leiria & van Uden (1963) 133. Candida siluanorum van der Walt, van der Khft & D.B. Scott (1971) 134. Candida silvatica (van der Walt, van der Klift & D.B. Scott) S.A. Meyer & Yarrow (1978) 135. Candida silvicultrix van der Walt, D.B. Scott & van der Klift (1972) 136. Candida solani Lodder & Kreger-van Rij (1952) 137. Candida sonorensis (M.W. Miller, Phaff, Miranda, Heed & Starmer) S.A. Meyer & Yarrow (1978) 138. Candida sophiae-reginae C. Ramirez & A. Gonzalez (1984) 139. Candida sorbophila (Nakase) S.A. Meyer & Yarrow (1978) 140. Candida sorboxylosa Nakase (1971) 141. Candida spandovensis (Henninger & Windisch) S.A. Meyer & Yarrow (1978) 142. Candida stellata (Kroemer & Krumbholz) S.A. Meyer & Yarrow (1978) 143. Candida succiphila J.-D. Lee & Komagata (1980) 144. Candida suecica Rodrigues de Miranda & Norkrans (1968)

457

64. Candida Berkhout / S.A. Meyer et al.

145. Candida 146. Candida 147. Candida 148. Candida 149. Candida 150. Candida 151. Candida 152. Candida 153. Candida 154. Candida 155. Candida 156. Candida 157. Candida 158. Candida 159. Candida 160. Candida 161. Candida 162. Candida 163. Candida

tanzawaensis Nakase & M. Itoh (1988) tenuis Diddens & Lodder (1942) tepae Grinbergs (1967) torresii (van Uden & Zobell) S.A. Meyer & Yarrow (1978) tropicalis (Castellani) Berkhout (1923) tsuchiyae Nakase & M. Suzuki (1985) utilis (Henneberg) Lodder & Kreger-van Rij (1952): see Pichia jadinii, p. 314 uaccinii Tokuoka, Ishitani, S. Goto & Komagata (1987) valdiviana Grinbergs & Yarrow (1970) valida (Leberle) van Uden & H.R. Buckley (1970): see Pichia membranifaciens, p. 319 vanderwaltii (Vidal-Leiria) S.A. Meyer & Yarrow (1978) vartiovaarae (Capriotti) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) versatilis (Etchells & T.A. Bell) S.A. Meyer & Yarrow (1978) vinaria Y Ohara, Nonomura & Yunome ex M.Th. Smith (1973) vini (Vallot ex Desmazieres) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa (1962) wickerhamii (Capriotti) S.A. Meyer & Yarrow (1978) xestobii Yarrow & S.A. Meyer (1978) zeylanoides (Castellani) Langeron & Guerra (1938)

Key to species It must be noted that C. famata is not included in the key because it is variable in many of the tests. 1. 2(1). 3(2). 4(3). 5(4). 6(4). 7(3). 8(7). 9(8). 10(7). 11(10). 12(11). 13(2). 14(13). 15(13). 16(15). 17(16). 18(17). 19(16). 20(15). 21(20).

a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b

Nitrate growth positive —^ 2 Nitrate growth negative -^ 29 Melezitose growth positive -^ 3 Melezitose growth negative ^13 Raffinose growth positive —» 4 Raffinose growth negative —> 7 Glucose fermentation positive -^ 5 Glucose fermentation negative -^ 6 Galactose growth positive Galactose growth negative Growth at 3 7 T positive Growth at 37''C negative Galactose growth positive -^ 8 Galactose growth negative -^ 10 Soluble starch growth positive Soluble starch growth negative -^ 9 Lactose growth positive Lactose growth negative Soluble starch growth positive Soluble starch growth negative -^ 11 L-Rhamnose growth positive L-Rhamnose growth negative ^12 Erythritol growth positive Erythritol growth negative Erythritol growth positive —> 14 Erythritol growth negative -^ 15 Galactose growth positive Galactose growth negative Growth at 3TC positive -^ 16 Growth at 3TC negative -^ 20 Galactose growth positive -^ 17 Galactose growth negative —» 19 L-Rhamnose growth positive L-Rhamnose growth negative —> 18 Hexadecane growth positive Hexadecane growth negative Cellobiose growth positive Cellobiose growth negative Cellobiose growth positive ^21 Cellobiose growth negative -^ 24 Galactose growth positive —> 22 Galactose growth negative -^ 23

C. valdiviana: C utilis: C edax: C. bertae:

p. p. p. p.

C. ishiwadae:

p. 516

C. chilensis: C. incommunis: C. ishiwadae:

p. 495 p. 513 p. 516

C. populi:

p. 541

C. incommunis: C. vartiovaarae:

p. 513 p. 567

C. nanaspora: C. boidinii:

p. 530 p. 488

C. methanosorbosa: C. vaccinii: C magnoliae: C. berthetii: C. glucosophila:

566 565 500 486

p. 526 p. p. p. p.

565 521 487 510

458 22(21). 23(21). 24(20). 25(24). 26(25). 27(26). 28(26). 29(1). 30(29). 31(30). 32(31). 33(32). 34(33). 35(34). 36(32). 37(36). 38(31). 39(38). 40(39). 41(40). 42(40). 43(39). 44(43). 45(44). 46(45). 47(45). 48(43). 49(48). 50(48). 51(50). 52(51). 53(52). 54(50).

Vc. Descriptions of anamorphic ascomycetous genera and species a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b

L-Rhamnose growth positive L-Rhamnose growth negative Soluble starch growth positive Soluble starch growth negative Raffinose growth positive Raffinose growth negative —^ 25 L-Rhamnose growth positive L-Rhamnose growth negative -^ 26 Glucose fermentation positive -^ 27 Glucose fermentation negative -^ 28 0.01% Cycloheximide growth positive 0.01% Cycloheximide growth negative 0.01%) Cycloheximide growth positive 0.01% Cycloheximide growth negative Erythritol growth positive -^ 30 Erythritol growth negative —> 86 0.01% Cycloheximide growth positive -^ 31 0.01% Cycloheximide growth negative -^ 64 Soluble starch growth positive ^32 Soluble starch growth negative ^38 Growth at 37''C positive -^ 33 Growth at 37''C negative —> 36 Lactose growth positive Lactose growth negative -^ 34 Glucose fermentation positive -^ 35 Glucose fermentation negative Growth at 40''C positive Growth at 40*'C negative L-Rhamnose growth positive L-Rhamnose growth negative ^37 DL-Lactate growth positive DL-Lactate growth negative Glucose fermentation positive - ^ 3 9 Glucose fermentation negative ^59 Raffinose growth positive -^ 40 Raffinose growth negative -^ 43 Growth at 37°C positive -^ 41 Growth at 37^C negative -^ 42 L-Rhamnose growth positive L-Rhamnose growth negative Lactose growth positive Lactose growth negative Lactose growth positive -^ 44 Lactose growth negative -^ 48 Growth at 37''C positive Growth at 3 7 ^ negative -> 45 Melezitose growth positive -^ 46 Melezitose growth negative —^ 47 L-Rhamnose growth positive L-Rhamnose growth negative Trehalose fermentation positive Trehalose fermentation negative L-Rhamnose growth positive -^ 49 L-Rhamnose growth negative -^ 50 Galactose growth positive Galactose growth negative Galactose growth positive ^51 Galactose growth negative -^ 54 Trehalose fermentation positive —> 52 Trehalose fermentation negative Galactose fermention positive Galactose fermention negative ^53 Pellicle formation positive Pellicle formation negative Cellobiose growth positive Cellobiose growth negative —> 55

C wickerhamii: C. uersatilis: C. ernobii: C. noruegica: C. lactis-condensi: C. nitratophila:

C. pignaliae: C. etchellsii: C uanderwaltii: C. etchellsii:

C. blankii:

C. chiropterorum: C. peltata: C. homilentoma: C. tenuis: C. shehatae var. lignosa: C. shehatae var. shehatae:

C. insectorum: C. entomophila: C. tenuis: C. santjacobensis:

C. auringiensis:

C. tenuis: C. coipomoensis: C coipomoensis: C. ergastensis:

p. p. p. p. p.

570 567 501 532 519

p. 531

p. p. p. p.

539 502 566 502

p. 487

p. p. p. p.

495 538 512 561

p. 552 p. 552

p. p. p. p.

515 500 561 550

p. 484

p. p. p. p.

561 496 496 501

C. succiphila: C. boidinii:

p. 559 p. 488

C. cantarellii: C. schatavii:

p. 492 p. 551

C. boleticola: C. laureliae: C ovalis:

p. 489 p. 519 p. 535

459

64. Candida Berkhout / S.A. Meyer et al. 55(54). 56(55). 57(56). 58(55). 59(38). 60(59). 61(60). 62(59). 63(62). 64(30). 65(64). 66(65). 67(64). 68(67). 69(68). 70(69). 71(70). 72(71). 73(71). 74(73). 75(74). 76(73). 77(70). 78(77). 79(78). 80(77). 81(80). 82(81). 83(69). 84(83). 85(67). 86(29). 87(86).

a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b a b

DL-Lactate growth positive —> 56 DL-Lactate growth negative ^ 5 8 Trehalose fermention positive Trehalose fermention negative -^57 Vitamin-free growth positive Vitamin-free growth negative Vitamin-free growth positive Vitamin-free growth negative DL-Lactate growth positive -^ 60 DL-Lactate growth negative -^ 62 Xylitol growth positive —^ 61 Xylitol growth negative Melezitose growth positive Melezitose growth negative Cellobiose growth positive -^ 61 Cellobiose growth negative -^ 63 Trehalose growth positive Trehalose growth negative Vitamin-free growth positive -^ 65 Vitamin-free growth negative -^ 67 Soluble starch growth positive -^ 66 Soluble starch growth negative Growth at 37*^0 positive Growth at 37''C negative Cellobiose growth positive -^ 68 Cellobiose growth negative -^85 Galactose growth positive —> 69 Galactose growth negative Melezitose growth positive -^ 70 Melezitose growth negative -^ 83 Raflfinose growth positive ^ 7 1 Raflfinose growth negative -^ 11 Lactose growth positive -^ 72 Lactose growth negative -^ 73 Growth at 37''C positive Growth at 37°C negative L-Rhamnose growth positive -^ 74 L-Rhamnose growth negative ^ 7 6 DL-Lactate growth positive DL-Lactate growth negative -^ 75 A'^-Acetyl-D-glucosamine growth positive A^-Acetyl-D-glucosamine growth negative Sucrose fermentation positive Sucrose fermentation negative L-Rhamnose growth positive -^ 78 L-Rhamnose growth negative -^ 80 Growth at 37°C positive Growth at 37''C negative -^ 79 Lactose growth positive Lactose growth negative Glucose fermentation positive ^ 8 1 Glucose fermentation negative Growth at 3TC positive -^ 82 Growth at 37''C negative Trehalose fermentation positive Trehalose fermentation negative Soluble starch growth positive -^ 84 Soluble starch growth negative L-Rhamnose growth positive L-Rhamnose growth negative Glucose fermentation positive Glucose fermentation negative Trehalose growth positive -^ 87 Trehalose growth negative -^ 169 Galactose growth positive -^ 88 Galactose growth negative -^ 147

C. llanquihuensis: p. 520 C. cantarellii: C. boidinii: C. cantarellii: C. pini:

p. 492 p. 488 p. 492 p. 540

C. lipolytica: p. 520 C. tenuis: p. 561 C nemodendra: p. 531 C. nemodendra: p. 531 C. fermenticarens: p. 504

C. rhagii: p. 545 C. siluicultrix: p. 555 C. fennica: p. 503

C mesenterica: p. 525

C. insectorum: p. 515 C. tenuis: p. 561 C. membranifaciens: p. 525 C. insectorum: C. silvanorum: C. membranifaciens: C. friedrichii:

p. 515 p. 554 p. 525 p. 506

C naeodendra: p. 529 C. tenuis: C. atlantica:

p. 561 p. 483

C. aaseri:

p. 476

C. atmosphaerica: p. 483 C. diddensiae: p. 498 C. butyri: p. 491 C. conglobata: C. dendronema: C. sequanensis: C. sophiae-reginae: C. psychrophila:

p. 496 p. 498 p. 551 p. 556 p. 542

Vc. Descriptions of anamorphic ascomycetous genera and species

460 88(87)

90(89). 91(90). 92(91). 93(92). 94(93)

95(93) 96(92) 97(96)

98(91). 99(98), 100(99). 101(100) 102(99). 103(102 104(103 105(103 106(105

107(102 108(107; 109(107

110(109; 111(110;

112(98). 113(112 114(113 115(113

a b a b a b a b a b a b a

Cellobiose growth positive -^ 89 Cellobiose growth negative -^ 130 Glucose fermentation positive -^ 90 Glucose fermentation negative -^ 123 Melezitose growth positive ^91 Melezitose growth negative —^116 Growth at 37''C positive -^ 92 Growth at 37''C negative -^ 98 0.01% Cycloheximide growth positive -^ 93 0.01% Cycloheximide growth negative -^ 96 Soluble starch growth positive -^ 94 Soluble starch growth negative -^ 95 Galactose fermentation positive

b a b a b a b

Galactose fermentation negative Raflfinose growth positive Raffinose growth negative Raffinose growth positive Raffinose growth negative -^ 97 Growth at 40°C positive Growth at 40''C negative

a b a b a b a b a b a b a b a b a b

Galactose fermentation positive -^ 99 Galactose fermentation negative ^ 1 1 2 L-Rhamnose growth positive -^ 100 L-Rhamnose growth negative -^ 102 Lactose growth positive ^ 1 0 1 Lactose growth negative Pellicle formation positive Pellicle formation negative Soluble starch growth positive -^ 103 Soluble starch growth negative -^ 107 DL-Lactate growth positive -^ 104 DL-Lactate growth negative -^ 105 Trehalose fermentation positive Trehalose fermentation negative Sucrose fermentation positive Sucrose fermentation negative ^ 1 0 6 Vitamin-free growth positive Vitamin-free growth negative

a b a b a b

Raffinose growth positive - ^ 1 0 8 Raffinose growth negative -^ 109 DL-Lactate growth positive DL-Lactate growth negative 0.01% Cycloheximide growth positive 0.01%) Cycloheximide growth negative

a b a. b a b a b a b a

Xylitol growth positive —^111 Xylitol growth negative Trehalose fermentation positive Trehalose fermentation negative L-Rhamnose growth positive L-Rhamnose growth negative - ^ 1 1 3 0.01%o Cycloheximide growth positive 0.01% Cycloheximide growth negative Xylitol growth positive Xylitol growth negative Xylitol growth positive

b a b 117(116). a b 116(90).

C. tropicalis: C uiswanathii: C. fluuiatilis: C (Pichia) guilliermondii var. guilliermondii: C. maltosa: C. melihiosica:

p. p. p. p. p. p.

563 570 505 511 522 524

C. (Clauispora) lusitaniae: C pulcherrima: C. reukaufii:

p. 521 p. 543 p. 545

C. pseudointermedia: C. intermedia: C. tenuis:

p. 541 p. 516 p. 561

C. shehatae var. lignosa: C. lyxosophila: C. intermedia:

p- 5^2 p- 521 p- 516

C. kruisii: C. shehatae var. shehatae: C. shehatae var. insectosa:

p- 518 p- 552 p- 552

C. salmanticensis: C intermedia:

p- 548 p- 516

^110 C

pulcherrima: C. reukaufii: C. sake:

p- 543 p- 545 p- 547

C. natalensis: C railenensis: C. oleophila: C. tenuis:

pppp-

530 544 533 561

C. xestobii: C. paludigena: C. pulcherrima: C. reukaufii: C. tanzawaensis:

p. p. p. p. p.

571 536 543 545 561

-^ 114 —» 115

Xylitol growth negative Galactose fermentation positive ^ 1 1 7 Galactose fermentation negative - ^ 1 2 0 Growth at 3 7 T positive - ^ 1 1 8 Growth at 2>TC negative ^ 1 1 9

64. Candida Berkhout / S.A. Meyer et al. 118(117). a b 119(117). a b 120(116). a b 121(120). a b 122(121). a b 123(89). a b 124(123). a b 125(124). a b 126(123). a b 127(126). a b 128(126). a b 129(128). a b 130(88). a b 131(130). a b 132(131). a b 133(132). a b 134(131). a b 135(130). a b 136(135). a b 137(136). a b 138(137). a b 139(136). a b 140(135). a b 141(140). a b 142(141). a b 143(142). a b 144(142). a b 145(140). a b 146(145). a b 147(87). a b 148(147). a b 149(148). a b 150(149). a b

Raffinose growth positive Raffinose growth negative Vitamin-free growth positive Vitamin-free growth negative 0.01% Cycloheximide growth positive - ^ 1 2 1 0.01% Cycloheximide growth negative Raffinose growth positive Raffinose growth negative —> 122 Xylitol growth positive Xylitol growth negative Xylitol growth positive -^ 124 Xylitol growth negative ^ 1 2 6 L-Rhamnose growth positive L-Rhamnose growth negative -^ 125 D-Gluconate growth positive D-Gluconate growth negative Melezitose growth positive -^ 127 Melezitose growth negative —> 128 Lactose growth positive Lactose growth negative 0.01% Cycloheximide growth positive -^ 129 0.01%) Cycloheximide growth negative DL-Lactate growth positive DL-Lactate growth negative Raffinose growth positive - ^ 1 3 1 Raffinose growth negative - ^ 1 3 5 Growth at 3 7 T positive ^ 1 3 2 Growth at 3 7 T negative -^ 134 Glucose fermentation positive - ^ 1 3 3 Glucose fermentation negative Melezitose growth positive Melezitose growth negative Galactose fermentation positive Galactose fermentation negative Growth at 3 7 T positive ^ 136 Growth at 3 7 ^ negative -^ 140 DL-Lactate growth positive -^ 137 DL-Lactate growth negative ^ 1 3 9 Growth at 4 0 T positive -^ 138 Growth at 40''C negative Glucose fermentation positive Glucose fermentation negative Melezitose growth positive Melezitose growth negative Melezitose growth positive —» 141 Melezitose growth negative -^ 145 Glucose fermentation positive -^ 142 Glucose fermentation negative DL-Lactate growth positive -^ 143 DL-Lactate growth negative -^ 144 Growth at 35"C positive Growth at 35''C negative Galactose fermentation positive Galactose fermentation negative Galactose fermentation positive Galactose fermentation negative —> 146 0.01% Cycloheximide growth positive 0.01%) Cycloheximide growth negative Melezitose growth positive -^ 148 Melezitose growth negative ^157 L-Rhamnose growth positive -^ 149 L-Rhamnose growth negative -^ 152 Growth at 37°C positive -^ 150 Growth at 37*'C negative - ^ 1 5 1 Raffinose growth positive Raffinose growth negative

C. guilliermondii var. membranifaciens

461 (Pichia ohmeri). C. tropicalis. C. savonica. C. buinensis.

p- 511 p- 563 p- 550 p- 491

C. torresii: C xestobii:

p- 562 p- 571

C. santamariae: C. zeylanoides:

p- 549 p- 571

C. tenuis:

p. 561

C. saitoana: C. glaebosa:

p. 546 p. 509

C. paludigena: C. castrensis:

p. 536 p. 493

C. insectalens. C. tepae C. zeylanoides

p. 514 p. 562 p. 571

C. palmioleophila: C. haemulonii: C. mogii: C milleri: C. xestobii:

p. p. p. p. p.

535 511 527 526 571

C. catenulata: C. albicans: C. caseinolytica: C. parapsilosis: C. zeylanoides:

p. p. p. p. p.

494 476 492 536 571

C. azyma:

C. quercitrusa: C. sake. C. sake. C. multigemmis: C. humilis.

p. 485

p. p. p. p. p.

543 547 547 528 513

C. zeylanoides: C austromarina:

p. 571 p. 484

C. odintsouae: C. freyschussii:

p. 532 p. 506

462 151(149). a b 152(148). a b 153(152). a b 154(153). a b 155(154). a b 156(152). a b 157(147). a b 158(157). a b 159(158). a b 160(159). a b 161(159). a b 162(161). a b 163(159). a b 164(157). a b 165(164). a b 166(165). a b 167(166). a b 168(164). a b 169(86). a b 170(169). a b 171(170). a b 172(171). a b 173(173). a b 174(173). a b 175(173). a b 176(175). a b 177(175). a b 178(170). a b 179(178). a b 180(179). a b 181(178). a b 182(181). a b 183(181). a b

Vc. Descriptions of anamorphic ascomycetous genera and species DL-Lactate growth positive DL-Lactate growth negative Cellobiose growth positive —> 153 Cellobiose growth negative ^ 1 5 6 Soluble starch growth positive Soluble starch growth negative -^ 154 DL-Lactate growth positive —> 155 DL-Lactate growth negative Growth at 3 5 ^ positive Growth at 35''C negative Raffinose growth positive Raffinose growth negative 0.01% Cycloheximide growth positive ^ 1 5 8 0.01% Cycloheximide growth negative -^ 164 L-Rhamnose growth positive L-Rhamnose growth negative ^ 1 5 9 Xylitol growth positive -^ 160 Xylitol growth negative ^ 1 6 1 Trehalose fermentation positive Trehalose fermentation negative DL-Lactate growth positive -^ 162 DL-Lactate growth negative -^ 163 Citrate growth positive Citrate growth negative A'^-Acetyl-D-glucosamine growth positive A'^-Acetyl-D-glucosamine growth negative Growth at 2>TC positive -^ 165 Growth at 37°C negative -^ 168 Glucose fermentation positive —^ 166 Glucose fermentation negative Raffinose growth positive Raffinose growth negative -^ 167 Growth at 40°C positive Growth at 40°C negative Xylitol growth positive Xylitol growth negative Galactose growth positive -^ 170 Galactose growth negative -^ 184 Glucose fermentation positive ^ 1 7 1 Glucose fermentation negative —> 178 Galactose fermentation positive Galactose fermentation negative -^ 172 DL-lactate growth positive DL-lactate growth negative ^ 1 7 3 Cellobiose growth positive ^ 1 7 4 Cellobiose growth negative -^ 175 Raffinose growth positive Raffinose growth negative 0.01% Cycloheximide growth positive ^ 1 7 6 0.01% Cycloheximide growth negative -^ 177 Xylitol growth positive Xylitol growth negative Citrate growth positive Citrate growth negative 0.01% Cycloheximide growth positive ^ 1 7 9 0.01% Cycloheximide growth negative ^ 1 8 1 Cellobiose growth positive Cellobiose growth negative -^ 180 DL-Lactate growth positive DL-Lactate growth negative Growth at 3 7 T positive - ^ 1 8 2 Growth at 3 7 T negative -^ 183 A/^-Acetyl-D-glucosamine growth positive A^-Acetyl-D-glucosamine growth negative Raffinose growth positive Raffinose growth negative

C. maritima: C. oregonensis:

p. 523 p. 534

C. insectamans:

p. 515

C. reukaufii: C. quercuum: C. solani: C. tsuchiyae: C. musae:

p. p. p. p. p.

545 543 555 564 528

C anatomiae:

p. 479

C. santamariae: C. beechii:

549 485

C. ancudensis: C. petrohuensis: C. zeylanoides: C. drimydis:

p. p. p. p.

480 539 571 500

C. siluatica: C. bombi:

p. 554 p. 489

C. glabrata: C. castellii: C. fructus: C. suecica:

p. p. p. p.

508 493 507 560

C. spandouensis:

p. 558

C. cylindracea:

p. 497

C. gropengiesseri: C geochares:

p. 510 p. 508

C. gropengiesseri: C bombicola: C. gropengiesseri: C. floricola:

p. p. p. p.

510 490 510 505

C. antillancae:

p. 481

C. uinaria: C sorbophila:

p. 568 p. 557

C. rugosa: C pararugosa: C. a/?/^: C. galacta:

p. p. p. p.

546 538 482 507

463

64. Candida Berkhout / S.A. Meyer et al. 184(169; 185(184 186(184 187(186; 188(186; 189(188; 190(189; 191(189; 192(191

193(192; 194(188; 195(194; 196(195 197(196; 198(197;

199(198 200(199; 201(199; 202(195 203(202; 204(202; 205(204;

a b a b a b a b a b a b a b a b a

Raffinose growth positive -^ 185 Raffinose growth negative —^186 D-Mannitol growth positive D-Mannitol growth negative L-Rhamnose growth positive - ^ 1 8 7 L-Rhamnose growth negative ^ 1 8 8 Cellobiose growth positive Cellobiose growth negative D-Mannitol growth positive -^ 189 D-Mannitol growth negative ^ ^ 1 9 4 0.01% Cycloheximide growth positive 0.01% Cycloheximide growth negative Glucose fermentation positive Glucose fermentation negative Growth at 3 5 ^ positive -> 192 Growth at 35°C negative Citrate growth positive

b a b a b a b a b a b a

Citrate growth negative -^ 193 Ethanol growth positive Ethanol growth negative Cellobiose growth positive Cellobiose growth negative —> 195 Vitamin-free growth positive —» 196 Vitamin-free growth negative -^ 202 Ethanol growth positive —» 197 Ethanol growth negative Growth at 2>TC positive -^ 198 Growth at 3 7 T negative -^ 201 Citrate growth positive

b a b a b a b a b a b a b a b

Citrate growth negative —> 199 Growth at 40''C positive Growth at 4 0 T negative -^ 200 Propane 1, 2 diol growth positive Propane 1, 2 diol growth negative A^-Acetyl-D-glucosamine growth positive A'^-Acetyl-D-glucosamine growth negative Growth at 4 0 ^ positive -^ 203 Growth at 40*'C negative -> 204 Glucose fermentation positive Glucose fermentation negative A'^-Acetyl-D-glucosamine growth positive A/^-Acetyl-D-glucosamine growth negative Xylitol growth positive Xylitol growth negative

C. apicola: C. stellata:

p. 481 p. 559

C montana: C. maris:

p. 527 p. 523

C. sonorensis: C. krissii:

p. 556 p. 517

C. uini: C diuersa: C. siluae:

p. 569 p. 499 p. 553

C. siluae: C karawaiewii: C. dendrica:

p. 553 p. 517 p. 497

C. amapae:

p. 479

C. krusei: C. ualida:

p. 519 p. 566

C. ethanolica:

p. 503

-> 190 ^191

C

rugopelliculosa: C. ualida: C. ualida: C. pseudolambica:

p. p. p. p.

545 566 566 542

C. glabrata: C. inconspicua: C. ualida:

p. 508 p. 514 p. 566

C. sorboxylosa: C. castellii:

p. 558 p. 493

-^ 205

Separation of Candida species by physiological groups Candida is divided into physiological groups solely for convenience and ease in identification. There is no known basis of genetic relatedness for species within each of these groups. Some species appear in more than one group because of their physiological variability. There are four species not included in the Physiological Group Keys because of their particular growth characteristics. C austromarina and C psychrophila do not grow at 25°C, C famata var. famata and C famata var. flareri have extensive physiological variability and C glucosophila is osmophilic and does not grow in the usual media without additional sugar. Key to the physiological groups: 1. 2(1). 3(2). 4(3). 5(4).

a b a b a b a b a b

Inositol assimilated Inositol not assimilated —» 2 Nitrate assimilated Nitrate not assimilated -^ 3 Erythritol assimilated —> 4 Erythritol not assimilated —^ 6 Raffinose assimilated Raffinose not assimilated -^ 5 Maltose assimilated Maltose not assimilated

Group I Group II

Group III Group IV Group V

Vc. Descriptions of anamorphic ascomycetous genera and species

464 6(3).

a b 7(6). a b 8(7). a b 9(7). a b 10(9). a b 11(9). a b

Growth at 40*^0 Growth absent at 40*'C -^ 7 Raffinose assimilated -^ 8 Raffinose not assimilated -^ 9 Cellobiose assimilated Cellobiose not assimilated Cellobiose assimilated -^ 10 Cellobiose not assimilated -^ 11 Melezitose assimilated Melezitose not assimilated Trehalose assimilated Trehalose not assimilated

Group VI

Group VII Group VIII

Group IX Group X Group XI Group XII

Key to species in Group I: Growth response: inositol +. See Table 50. 1. 2(1). 3(2).

4(3). 5(1). 6(5). 7(6). 8(7). 9(5).

a b a b a b

a b a b a b a b a b a b

Nitrate assimilated —^ 2 Nitrate not assimilated —> 5 Erythritol assimilated -^ 3 Erythritol not assimilated Lactose assimilated -^ 4 Lactose not assimilated Growth at 37''C Growth absent at 37°C Erythritol assimilated —> 6 Erythritol not assimilated -^ 9 Growth at 37''C ^ 7 Growth absent at 37''C Lactose assimilated -^ 8 Lactose not assimilated Rhamnose assimilated Rhamnose not assimilated Lactose assimilated Lactose not assimilated

C. ualdiuiana:

p. 566

C, incommunis: C. edax: C. bertae:

p. 513 500 486

C. santjacobensis:

550

C. chiropterorum C. blankii C. auringiensis: C. paludigena C. castrensis.

495 487 ,484 . 536 .493

Table 50 Key characters of Group I Candida species with the following primary growth response: inositol + Species

Assimilation Lactose

Candida

Raffinose

L-Rhamnose

Growth at 37''C Erythritol

Nitrate

auringiensis

C. bertae C. blankii C. castrensis C

chiropterorum

C edax C. incommunis C

paludigena

C

santajacobensis

C ualdiuiana

Key to species in Group II: Growth response: inositol -, nitrate +. See Table 51. 1. 2(1). 3(2). 4(2). 5(1). 6(5).

a b a b a b a b a b a b

Erythritol assimilated —> 2 Erythritol not assimilated -^ 5 Sucrose assimilated -^ 3 Sucrose not assimilated —> 4 Lactose assimilated Lactose not assimilated Galactose assimilated Galactose not assimilated Melezitose assimilated -^ 6 Melezitose not assimilated —» 8 Growth at 3 7 T Growth absent at 3TC ^ 1

C. chilensis: C ishiwadae: C. nanaspora: C boidinii:

C utilis:

p. p. p. p.

495 516 530 488

p. 565

64. Candida Berkhout / S.A. Meyer et al 7(6).

a b 8(5). a b 9(8). a b 10(9). a b 11(10). a b 12(11). a b 13(8). a b 14(13). a

Growth present with 0.01% cycloheximide Growth absent with 0.01% cycloheximide L-Rhamnose assimilated -^ 9 L-Rhamnose not assimilated ^13 Sucrose assimilated Sucrose not assimilated -^ 10 Galactose assimilated —> 11 Galactose not assimilated Growth at 37°C Growth absent at 3 7 T ^12 Cellobiose assimilated Cellobiose not assimilated Growth at 37°C ^ 14 Growth absent at 37°C -^ 15 Galactose assimilated

b 15(13). a b 16(15). a b 17(15). a b 18(17). a b 19(18). a b

Galactose not assimilated Cellobiose assimilated -^ 16 Cellobiose not assimilated -^ 17 Galactose assimilated Galactose not assimilated Raffinose assimilated Raffinose not assimilated -^ 18 Growth present with 0.1%) cycloheximide Growth absent with 0.1%) cycloheximide Galactose assimilated Galactose not assimilated

465 C. populi: C. vartiovaarae:

p. 541 p. 567

C. ernobii:

p. 501

C noruegica: methanosorbosa:

p. 532 p. 526

C wickerhamii: C. nitratophila:

p. 570 p. 531

C. magnoliae: C. vaccinii: C. berthetii:

p. 521 p. 565 p. 487

C. uersatilis: C. noruegica: C. lactis-condensi:

p. 567 p. 532 p. 519

C. etchellsii: C. uanderwaltii: C. pignaliae:

p. 502 p. 566 p. 539

C

—^ 19

Table 51 Key characters of Group II Candida species with the following primary growth responses: inositol - , nitrate + Assimilation

Species Galactose Sucrose Cellobiose

-

-

+

C boidinii C. chilensis

+

+

+

C ernobii

-

+

+

C. etchellsii

V

-

-

C. ishiwadae

V

+

+

C

V

Candida berthetii

-

+

C. magnoliae

+

V

C

+

-

lactis-condensi

methanosorbosa

C. nanaspora

+

C

+

nitratophila

+

+

+

C. uanderwaltii

+

V

-

C uartiouaarae

-

+

+

C. uersatilis

+

V

+

C. wickerhamii

+

-

+

-

+

+

+

+

a Growth in vitamin-free medium -^ 2 b Growth absent in vitamin-free medium

0.01% Cycloheximide

+

Key to species in Group III: Growth responses: inositol 1.

Growth at 37T

V

C. uaccinii

C. populi

Erythritol

-

C utilis

C. pignaliae

Raffinose Melezitose L-Rhamnose

-

-

C. noruegica

Lactose

—> 4

nitrate -, erythritol +, raffinose +. See Table 52.

Vc. Descriptions of anamorphic ascomycetous genera and species

466 2(1).

a b 3(2). a b 4(1). a b 5(4). a b 6(5). a b 7(4). a b 8(7). a b 9(7). a b 10(9). a b

Maltose fermented -^ 3 Maltose not fermented Trehalose fermented Trehalose not fermented Raffinose fermented ^ 5 Raffinose not fermented -^ 7 Lactose assimilated Lactose not assimilated -^ 6 2-Keto-D-gluconate assimilated 2-Keto-D-gluconate not assimilated L-Rhamnose assimilated ^ 8 L-Rhamnose not assimilated —> 9 Growth at 37"C Growth absent at 37°C Maltose fermented ^10 Maltose not fermented DL-Lactate assimilated DL-Lactate not assimilated

C rhagii: C fennica: C. silvicultrix:

p. 545 p. 503 p. 555

C. entomophila:

p. 500

C. membranifaciens: C. siluanorum:

p. 525 p. 554

C. insectorum: C. tenuis:

p. 515 p. 561

C friedrichii: C shehatae var. lignosa: C shehatae var. shehatae:

p. 506 p. 552 p. 552

Table 52 Key characters of Group III Candida species with the following primary growth responses: inositol - , nitrate - , erythritol +, raffinose + Species

Fermentation Maltose

Candida

entomophila

+

C

-

C. insectorum

Assimilation Raffinose

Lactose

L-Rhamnose

DL-Lactate

Growth in vitamin-free medium

2-Keto-Dgluconate

Growth at 37°C

-

C fennica friedrichii

Trehalose

C. membranifaciens

V

C rhagii

-

C. shehatae uar shehatae

+

C shehatae var. lignosa

+

C. siluanorum

+

C. silivultrix

+

C. tenuis

V

Key to species in Group IV: Growth responses: inositol -, nitrate -, erythritol +, raffinose -, maltose +. See Table 53. 1.

a b 2(1). a b 3(2). a b 4(3). a b 5(4). a b 6(3). a b 7(1). a b 8(7). a b 9(8). a b 10(7). a b

Growth at 37°C -^ 2 Growth absent at 3 7 T -^ 1 Lactose assimilated Lactose not assimilated -^ 3 L-Rhamnose assimilated -^ 4 L-Rhamnose not assimilated —^ 6 Trehalose fermented -^ 5 Trehalose not fermented Maltose fermented Maltose not fermented Trehalose fermented Trehalose not fermented L-Rhamnose assimilated -^ 8 L-Rhamnose not assimilated -^ 10 Lactose assimilated Lactose not assimilated -^ 9 Trehalose fermented Trehalose not fermented Cellobiose assimilated -^ 11 Cellobiose not assimilated

C aaseri:

C. peltata: C homilentoma: C. naeodendra: C diddensiae: C. butyri:

C

p. 476

p. p. p. p. p.

538 512 529 498 491

C tenuis:

p. 561

C. dendronema: C atlantica:

p. 498 p. 483

sophiae-reginae:

p. 556

467

64. Candida Berkhout / S.A. Meyer et al. 11(10). a b 12(11). a b 13(12). a b

Trehalose fermented —» 12 Trehalose not fermented ^15 Soluble starch assimilated -^ 13 Soluble starch not assimilated —^14 Growth in vitamin-free medium Growth absent in vitamin-free medium

14(12). a b 15(11). a b 16(15). a b

Lactose assimilated Lactose not assimilated Galactose assimilated -^ 16 Galactose not assimilated Lactose assimilated Lactose not assimilated

C. fennica: C. shehatae var. shehatae: C. shehatae var. lignosa: C. coipomoensis: C. atmosphaerica: C. mesenterica: C. ergastensis: C. sequanensis:

p. p. p. p. p.

503 552 552 496 483

p. 525 p. 501 p. 551

Table 53 Key characters of Group IV Candida species with the following primary growth responses: inositol - , nitrate - , erythritol +, raffinose - , maltose +

Fermentation

Species

Maltose

Trehalose

Assimilation Galactose

Cellobiose

Lactose

Soluble starch

L-Rhamnose

Growth in vitaminfree medium

Growth at 37''C

Candida aaseri C atlantica C

atmosphaerica

C. butyri C. coipomoensis C. dendronema C. diddensiae C. ergastensis C. fennica C. homilentoma C. mesenterica C. naeodendra C. peltata C. sequanensis C. shehatae var shehatae C. shehatae uar. lignosa C. sophiae-reginae C tenuis

Key to species in Group V: Growth responses: inositol -, nitrate -, erythritol +, raffinose -, maltose -. See Table 54. 1. 2(1). 3(2). 4(3). 5(4). 6(5). 7(3). 8(7).

a b a b a b a b a b a b a b a b

Glucose fermented —> 2 Glucose not fermented -^ 12 Trehalose assimilated —^ 3 Trehalose not assimilated Cellobiose assimilated —> 4 Cellobiose not assimilated -^ 1 Galactose assimilated -^ 5 Galactose not assimilated Growth present with 0.01% cycloheximide Growth absent with 0.01% cycloheximide Galactose fermented Galactose not fermented Galactose assimilated -^ 8 Galactose not assimilated —^10 Galactose fermented Galactose not fermented -^ 9

C. boidinii:

p. 488

C. oualis:

p. 535

C conglobata: C. succiphila: C boleticola:

p. 496 p. 559 p. 489

C schatauii:

p. 551

-^ 6

Vc. Descriptions of anamorphic ascomycetous genera and species

468 9(8).

a Growth in vitamin-free medium b Growth absent in vitamin-free medium

10(7). a b 11(10). a b 12(1). a b 13(12). a b

Growth in vitamin-free medium Growth absent in vitamin-free medium Ribitol assimilated Ribitol not assimilated Trehalose assimilated Trehalose not assimilated —> 13 Galactitol assimilated Galactitol not assimilated

C. cantarellii: C. boleticola: C. laureliae: C. cantarellii:

p. p. p. p.

492 489 519 492

-^ 11 C llanquihuensis: C. pini: C nemodendra:

p. 520 p. 540 p. 531

C. fermenticarens: C. lipolytica:

p. 504 p. 520

Table 54 Key characters of Group V Candida species with the following primary growth responses: inositol - , nitrate - , erythritol +, raffinose - , maltose Species

Fermentation Glucose

Galactose

Assimilation Galactose

Trehalose

Cellobiose

Ribitol

Galactitol

Growth in vitaminfree medium

Growth with 0.01% cycloheximide

Candida boidinii C. boleticola C

cantarellii

C. conglobata C

fermenticarens

C laureliae C lipolytica C. llanquihuensis C

nemodendra

C oualis C. pini C

schatavii

C. succiphila

Key to species in Group VI: Growth responses: inositol -, nitrate -, erythritol -, 40''C +. See Table 55.

8(7).

Cellobiose assimilated —> 2 Cellobiose not assimilated -^ 11 Galactose assimilated —^ 3 Galactose not assimilated —> 9 Maltose assimilated -^ 4 Maltose not assimilated Raffinose assimilated -^ 5 Raffinose not assimilated -^ 8 Glucose fermented —> 6 Glucose not fermented Melezitose assimilated -^ 7 Melezitose not assimilated L-Arabinose assimilated L-Arabinose not assimilated Soluble starch assimilated

b a b 10(9). a b 11(1). a b 12(11). a b 13(12). a b

Soluble starch not assimilated Maltose assimilated -^ 10 Maltose not assimilated Sucrose assimilated Sucrose not assimilated Maltose assimilated -^ 12 Maltose not assimilated —^ 14 Glucose fermented -^ 13 Glucose not fermented Soluble starch assimilated Soluble starch not assimilated

1. 2(1). 3(2). 4(3). 5(4). 6(5).

a b a b a b a b a b a

7(6).

9(2).

C. insectalens:

p. 514

C saitoana:

p. 546

C (Pichia) guilliermondii var. membranifaciens: C (Pichia) guilliermondii var. guilliermondii: C melibiosica: C tropicalis: C viswanathii: C (Clavispora) lusitaniae:

p- 511 p- 511 p- 524 p- 563 p- 570 p- 521

C sonorensis: C freyschussii: C insectamans:

p- 556 p- 506 p- 515

C. palmioleophila: C. albicans: C parapsilosis:

p. 535 p. 476 p. 536

64. Candida Berkhout / S.A. Meyer et al. 14(11). a b 15(14). a b 16(15). a b 17(16). a b 18(16). a b

469

Galactose assimilated -^ 15 Galactose not assimilated ^16 Trehalose assimilated Trehalose not assimilated D-Glucosamine assimilated -^ 17 D-Glucosamine not assimilated -^ 18 Glucose fermented Glucose not fermented Growth in vitamin-free medium Growth absent in vitamin-free medium

C. caseinolytica: C. rugosa:

C. krusei (Issatchenkia orientalis): C inconspicua: C. ethanolica: C. glahrata:

p. 492 p. 546

p. p. p. p.

519 514 503 508

Table 55 Key characters of Group VI Candida species with the following primary growth responses: inositol - , nitrate - , erythritol - , 40"C + Species

Glucose fermentation

Assimilation^ Gal

Mai

Sue

Gel

Tre

Raf

Mz

Candida albicans

+

V

C. caseinolytica

-

V

-

+

-

+ +

+ +

-

-

+

+

-

+

L-Ar

DGM

Growth in vitamin-free medium

C. ethanolica C. freyschussii C. glabrata C. guilliermondii guilliermondii

uar.

C. guilliermondii uar. membranifaciens C. inconspicua C. insectalens

+

C. insectamans

-

+

C. krusei C. lusitaniae

+

+

+

C. melibiosica

+

+

+

+

+

+

+

C. palmioleophila

+

+

+

+

+

+

C. parapsilosis

+

+

+

-

+

-

+

C. rugosa C saitoana C. sonorensis C. tropicalis C. uiswanathii ^ Abbreviations: Gal, galactose; Mai, maltose; Sue, sucrose; Cel, cellobiose; Tre, trehalose; Raf, raflfinose; Mz, melezitose; St, soluble starch; L-Ar, L-arabinose; D G M , D-glucosamine.

Key to species in Group VII: Growth responses: inositol -, nitrate -, erythritol -, 40''C -, raffinose +, cellobiose +. See Table 56. 1. 2(1). 3(2). 4(3), 5(4).

6(2).

a b a b a b a b a

Trehalose assimilated -^ 2 Trehalose not assimilated Galactose assimilated —^ 3 Galactose not assimilated -^ 6 L-Rhamnose assimilated -^ 4 L-Rhamnose not assimilated -^ 1 Growth at 37''C Growth absent at 37*^0 -^ 5 Lactose assimilated

b Lactose not assimilated a Growth at 3 7 T b Growth absent at 37°C

C. gropengiesseri:

p. 510

C (Pichia) guilliermondii var. guilliermondii:

p. 511

C. tenuis: C. intermedia: C. pseudointermedia: C odintsovae: C maritima:

p. p. p. p. p.

561 516 541 532 523

470

Vc. Descriptions of anamorphic ascomycetous genera and species

7(3).

a Glucose fermented -^ 8 b Glucose not fermented

8(7).

a b 9(8). a b 10(8). a b

Growth at 37T -^ 9 Growth absent at 37T ^ 1 0 L-Arabinose assimilated L-Arabinose not assimilated Glycerol assimilated —^ 11 Glycerol not assimilated

11(10). a b 12(11). a b

Galactose fermented ^^12 Galactose not fermented Sucrose fermented Sucrose not fermented

C. glaebosa: p- 509 C. saitoana: p- 546 C. (Pichia) guilliermondii var. guilliermondii: p- 511 C. melibiosica: p- 524 C. salmanticensis: p- 548 C. intermedia: p- 516 C. xestobii: C intermedia: C shehatae:

p- 571 p- 516 p- 552

Table 56 Key characters of Group VII Candida species with the following primary growth responses: inositol -, nitrate -, erythritol -, 40"C -, raffinose +, cellobiose + Species

Fermentation

Assimilation

Galactose

Candida glaebosa

-

-

+

+

+

-

-

+

-

C. gropengiesseri

+

-

+

+

-

-

-

-

+

v

+

V

+

+

+

-

+

V

+

+

C guilliermondii guilliermondii

van

+

+

C maritima

+

-

C

C

intermedia

Sucrose

Galactose

-

+ V

+ -

+

+

V

+

+

-

+

-

C

+

+

C saitoana

-

-

C. salmanticensis

+

+

C shehatae uar shehatae

+

+

C. shehatae uar. insectosa

+

C. shehatae uar lignosa

+

pseudointermedia

C. tenuis

V

C xestobii

+

+

+ +

C. odintsouae

melibiosica

Trehalose Lactose

Growth at

Glucose

+ -

+

+

L-Arabinose L-Rhamnose Glycerol

V

-

-

-

+

+

+

-

-

+

+

V

V

+

+

+

V

-

-

+

+

V

V

-

V

V

V

-

+

+

-

+

+

+

+

+

+ -

+

_ -

-

V

_ +

_ -

Key to the species in Group VIII: Growth responses: inositol -, nitrate -, erythritol -, 40°C -, raffinose +, cellobiose -. See Table 57. 1. 2(1). 3(2). 4(3). 5(4). 6(4). 7(3). 8(2). 9(8).

a b a b a b a b a b a b a b a b a b

Glucose fermented -^ 2 Glucose not fermented Trehalose assimilated -^ 3 Trehalose not assimilated —> 8 Galactose assimilated —> 4 Galactose not assimilated -^ 1 Growth at 37*'C -^ 5 Growth absent at 2>TC -> 6 Melezitose assimilated Melezitose not assimilated D-Xylose assimilated D-Xylose not assimilated Growth at 37°C Growth absent at 37*'C Galactose assimilated —> 9 Galactose not assimilated -^ 12 Galactose fermented Galactose not fermented -^ 10

C apis:

p. 482

C. haemulonii: p. 511 C. mogii: p. 527 C. xestobii: p. 571 C. milleri: p. 526 C bombi: p. 489 C. tsuchiyae: p. 564 C. spandouensis: p. 558

64. Candida Berkhout / S.A. Meyer et al. 10(9). a b 11(10). a b 12(8). a b

Maltose assimilated Maltose not assimilated -^ 11 Xylitol assimilated Xylitol not assimilated Glycerol assimilated Glycerol not assimilated

471 C.

floricola:

C. gropengiesseri: C bombicola: C. apicola: C. stellata:

p. 505 p. p. p. p.

510 490 481 559

Table 57 Key characters of Group VIII Candida species with the following primary growth responses: inositol - , nitrate - , erythritol - , 40'*C - , raffinose +, cellobiose Fermentation

Species

Glucose

Galactose

Candida apicola

+

C apis

-

C. haemulonii

+

-

C. milleri

+

+

C. mogii

+

-

C

+

+

+

-

C. bombi

+

C. bombicola

+

C. floricola

+

C

+

gropengiesseri

spandovensis

C. stellata C tsuchyiae

+

C. xestobii

+

Assimilation Galactose

Maltose

Trehalose

Melezitose

D-Xylose Glycerol

Xylitol

Growth at 37^

Key to species in Group IX: Growth responses: inositol -, nitrate -, erythritol -, 40'^C -, raffinose -, cellobiose +, melezitose +. See Table 58. 1. 2(1). 3(2). 4(1). 5(2). 6(5). 7(6).

8(4).

a b a b a b a b a b a b a b

a b 9(8). a b 10(9). a b 11(10). a b 12(9). a b 13(12). a b 14(13). a b 15(8). a

L-Rhamnose assimilated -^ 2 L-Rhamnose not assimilated —^ 4 Lactose assimilated Lactose not assimilated -^ 3 DL-Lactate assimilated DL-Lactate not assimilated Growth at 37''C -^ 5 Growth absent at 37°C -^ 8 Lactose assimilated Lactose not assimilated -^ 6 Soluble starch assimilated Soluble starch not assimilated -^ 7 Trehalose fermented Trehalose not fermented Galactose assimilated -^ 9 Galactose not assimilated -^ 15 Soluble starch assimilated —> 10 Soluble starch not assimilated -^ 12 Trehalose fermented - ^ 1 1 Trehalose not fermented Growth in vitamin-free medium Growth absent in vitamin-free medium Growth present with 0.01% cycloheximide -^ 13 Growth absent with 0.01% cycloheximide -> 16 Xylitol assimilated -^ 14 Xylitol not assimilated Trehalose fermented Trehalose not fermented DL-Lactate assimilated

b DL-Lactate not assimilated

C. tenuis:

p. 561

C. maritima: C. oregonensis:

p. 523 p. 534

C.

fluuiatilis:

p. 505

C uiswanathii:

p. 570

C. maltosa: C. (Metschnikowia) pulcherrima: C. (Metschnikowia) reukaufii:

p. 522 p. 543 p. 545

C lyxosophila: C. kruisii: C shehatae:

p. 521 p. 518 p. 552

C. natalensis: C railenensis: C. oleophila: C. quercuum: C solani: C. (Metschnikowia) reukaufii:

p. p. p. p. p. p.

530 544 533 543 555 545

472

Vc. Descriptions of anamorphic ascomycetous genera and species

16(12). a Xylitol assimilated

C. sake: C. (Metschnikowia) pulcherrima: C. (Metschnikowia) reukaufii:

p. 547 p. 543 p. 545

C. sake: C. tanzawaensis:

p. 547 p. 561

b Xylitol not assimilated -^ 17 17(16). a Galactose fermented b Galactose not fermented

Table 58 Key characters of Group IX Candida species with the following primary growth responses: inositol - , nitrate - , erythritol - , 40*'C - , raffinose - , cellobiose +, melezitose + Species

Fermentation^ Gal

Candida

fluuiatilis

C kruisii

Assimilation^

Tre

-

+

Gal

Lac

+

+

St

+

Growth

Rham

+

Lact

-

+

+

-

+

-

+ -

-

+

-

+ +

-

v

-

+

-

+

+ -

C. maritima

-

-

C natalensis

+

-

+

-

C oleophila

+

-

+

-

C oregonensis

-

C pulcherrima

v

C. quercuum

_

C. railenensis

+

+

+

-

-

-

-

+

C reukaufii

v

-

v

-

-

-

-

C sake

+

v

+

-

-

-

v

_

v

-

_

-

_

+

-

-

-

-

_

+

V +

_

4

-

-

-

-

+

-

+

-

+

-

-

v

-

-

-

v

_

_

_

-

+

-

+

-

-

v

v

v

-

-

+

+

+

+

+

^

+

-

+

+

+

+

-

-

-

+

-

37T

-

+ v

-

0.01% Cycloheximide

+

C lyxosophila

-

Vitamin-free medium

-

C. maltosa

-

Xyl

v

.

+

v

+

_

(

-

C shehatae uar shehatae

+

+

+

V

+

-

-

+

-

+

-

C. shehatae uar insectosa

+

+

+

v

+

-

-

v

-

+

-

C. shehatae uar lignosa

+

-

+

-

C

_

_

_

_

solani

C tanzawaensis

_

C tenuis

v

C viswanathii

+

+ _

+ _

w v

V _

+ _

+

-

+ +

-

+

+

_

+

+

-

_

v

+

-

+

-

+ (

v

-

+

+

-

-

-

-

v

-

-

+

+

^ Abbreviations: Gal, galactose; Tre, trehalose; Lac, lactose; St, soluble starch; Rham, L-rhamnose; Lact, DL-lactate; Xyl, xylitol.

Key to species in Group X: Growth responses: inositol -, nitrate -, erythritol -, 40°C -, raffinose -, cellobiose +, melezitose -. See Table 59. 1.

a b 2(1). a b 3(2). a b 4(3). a b 5(4). a b 6(4). a b 7(6), a b 8(7). a b 9(3). a b 10(9). a b

Trehalose assimilated -^ 2 Trehalose not assimilated -^ 13 L-Rhamnose assimilated L-Rhamnose not assimilated -^ 3 Maltose assimilated -^ 4 Maltose not assimilated -^ 9 Galactose assimilated -^ 5 Galactose not assimilated -^ 6 Glucose fermented Glucose not fermented Growth present with 0.01% cycloheximide Growth absent with 0.01% cycloheximide Ribitol assimilated -^ 8 Ribitol not assimilated Citrate assimilated Citrate not assimilated Growth present with 0.01% cycloheximide Growth absent with 0.01% cycloheximide D-Xylose assimilated -^ 11 D-Xylose not assimilated -^ 12

C anatomiae:

p. 479

C. buinensis: C. tepae:

p. 491 p. 562

C. suecica:

p. 560

C ancudensis: C. drimydis: C. petrohuensis:

p. 480 p. 500 p. 539

C torresii:

p. 562

-^ 1

-^ 10

473

64. Candida Berkhout / S.A. Meyer et al. 11(10). a b 12(10). a b 13(1). a b 14(13). a b 15(13). a b 16(15). a b

Galactose assimilated Galactose not assimilated Xylitol assimilated Xylitol not assimilated Glucose fermented ^14 Glucose not fermented -^ 15 Galactose assimilated Galactose not assimilated Galactose assimilated Galactose not assimilated -^ 16 L-Rhamnose assimilated L-Rhamnose not assimilated

C. savonica: C. beechii: C. santamariae: C. zeylanoides:

p- 550 p- 485 p- 549 p- 571

C. geochares: C. dendrica: C. antillancae:

p- 508 p- 497 p- 481

C. montana: C. krissii:

p- 527 p- 517

Table 59 Key characters of Group X Candida species with the following primary growth responses: inositol - , nitrate - , erythritol - , 40"C - , raffinose - , cellobiose +, melezitose Species

Glucose fermentation

—^

Candida anatomiae

+

_

C. ancudensis

-

-

C. antillancae

-

+

C. beechii

+

-

C. buinensis

+

+

C. dendrica

+

_

C. drimyidis

-

-

C geochares

+

+

Assimilation^ :^;^

—^

— +

_

+

+

+

_

+

-

+ _

+

+

C. krissii

-

_

_

C. montana

-

_

_

C. petrohuensis

-

-

C santamariae

+

V

C savonica

+

+

+

_

+

.

_

_

4

+

+

-

+

+

+

-

_ |

_

_

-

+

-

-

+

+

+

+

-

+

+

-

+

+

+

+

-

v

-

+

+

+

-

+

+

+

+

C. torresii

+

+

-

+

+

C. zeylanoides^

v

v

-

+

-

+ -

-

-

+ _

+

C suecica

+

+

+

C. ?ep<3g

-

-

+

+

_

+ _

+

_

+ +

+ 4

-

+

-

_

_

-

-

-

-

+

+

_

Growth in 0.01% Cycloheximide

+

-

-

~

v

+

_

+ -

_

-

+ _

^^

-

-

+

_

-

+ -

+

+

^j^

v

-

+ -

-

+

V

+

-

-

-

+

+ +

-

+

^ Abbreviations: Gal, galactose; Mai, maltose; Tre, trehalose; Xy, D-xylose; Rham, L-rhamnose; Rib, ribitol; Cit, citrate; Xyl, xylitol. ^ C. zeylanoides is variable at 35°C and 37°C; the remaining species in this group do not grow at these temperatures.

Key to species in Group XI: Growth responses: inositol -, nitrate -, erythritol -, 40''C -, raffinose -, cellobiose -, trehalose +. See Table 60. 1. 2(1). 3(2). 4(3). 5(4).

6(2). 7(6).

8(7).

a b a b a b a b a b

Melezitose assimilated -^ 2 Melezitose not assimilated -^ 6 Glucose fermented -^ 3 Glucose not fermented Galactose assimilated -^ 4 Galactose not assimilated Growth at 37''C Growth absent at 37"C —^ 5 L-Arabinose assimilated L-Arabinose not assimilated

a Sucrose assimilated b Sucrose not assimilated —> 1 a Growth with 0.01% cycloheximide b Growth absent with 0.01% cycloheximide a Galactose assimilated b Galactose not assimilated -^ 9

C. azyma:

p. 485

C musae: C parapsilosis:

p. 528 p. 536

C. multigemmis: C. quercitrusa: C sake: C suecica:

p. p. p. p.

528 543 547 560

C catenulata: C. zeylanoides:

p. 494 p. 571

C humilis:

p. 513

-^ 8

474

Vc. Descriptions of anamorphic ascomycetous genera and species

9(8).

a b 10(9). a b

Growth at ?>TC -^ 10 Growth absent at 2>TC Glucose fermented Glucose not fermented

C fructus: p. 507 C castellii: p. 493 C siluatica: p. 554

Table 60 Key characters of Group XI Candida species with the following primary growth responses: inositol -, nitrate -, erythritol -, 40'*C -, raffinose -, cellobiose -, trehalose + Species

Glucose

Assimilation Galactose

Sucrose

Growth

Melezitose

0.01% cycloheximide

v

+

Candida azyma

-

+

+

_

_

C catenulata

v

+

-

C fructus

+

_

_

_

_

_

_

C. humilis

+

+

_

_

_

_

_

C. multigemmis

+

+

+

+

C musae

+

-

+

+

+

+

_

_

-

+

+

+

37°C

C. castellii

C. parapsilosis

+

L-Arabinose

+

+

+

+

C. sake^

+

+

+

+

C siluatica

-

_

C. suecica

v

_

+

C. zeylanoides

v

v

-

_

+

-

C quercitrusa^

_

+

+

+

-

+

v

-

v

+

_ -

-

-

_ _

+

_

-

-

_

_ +

_ v

^ C quercitrusa and C. ^aAre are separated on growth at 35''C: C quercitrusa +, C. 5aA:e -.

Key to species in Group XII: Growth responses: inositol -, nitrate -, erythritol -, 40°C -, raffinose -, cellobiose -, trehalose -. See Table 61. It must be noted that growth with 0.01% cycloheximide was not determined for C. amapae. Therefore, this yeast is listed in the key as both positive and negative. 1.

a b 2(1). a b 3(2). a b 4(3). a b 5(4). a b 6(5). a b 7(4). a b 8(1). a b 9(8). a b 10(9). a

Galactose assimilated -^ 2 Galactose not assimilated -^ 8 Sucrose assimilated Sucrose not assimilated -^ 3 Glucose fermented Glucose not fermented -^ 4 DL-Lactate assimilated -^ 5 DL-Lactate not assimilated -^ 7 Growth at 37"C -^ 6 Growth absent at 37''C Growth on 50% glucose-yeast extract agar Growth absent on 50% glucose-yeast extract agar Growth on 50% glucose-yeast extract agar Growth absent on 50%) glucose-yeast extract agar Glucose fermented -^ 9 Glucose not fermented —» 17 Growth in vitamin-free medium -^ 10 Growth absent in vitamin-free medium -^ 12 D-Xylose assimilated

b D-Xylose not assimilated 11(10). a Glycerol assimilated

C. cylindracea: p. 497

C uinaria: p. 568 C. rugosa: p. 546 C. pararugosa: p. 538 C. galacta: p. 507 C. sorbophila: p. 557

C. pseudolambica: p. 542 C. ualida (Pichia membranifaciens): p. 566

—> 11 C. krusei: C ualida (Pichia membranifaciens): C rugopelliculosa: C ualida (Pichia membranifaciens): C. ualida (Pichia membranifaciens):

b Glycerol not assimilated 12(9). a b 13(12). a b

C bombicola: p. 490

A/^-Acetyl-D-glucosamine assimilated A/^-Acetyl-D-glucosamine not assimilated D-Xylose assimilated -^ 14 D-Xylose not assimilated -^ 15

-^ 13

p. 519 p. 566 p. 545 p. 566 p. 566

64. Candida Berkhout / S.A. Meyer et al. 14(13). a b 15(13). a b 16(15). a

475

DL-Lactate assimilated DL-Lactate not assimilated Growth on 50% glucose-yeast extract agar Growth absent on 50% glucose-yeast extract agar —> 16 Growth at 35T

C. sorboxylosa: p. 558 C. diuersa: p. 499 C. castellii: p. 493 C diuersa: C. karawaiewii: C. siluae: C. uini:

b Growth absent at 35T 17(8). a Growth with 0.01% cycloheximide -^ 18 b Growth absent with 0.01% cycloheximide

p. 499 p. 517 p. 553 p. 569

C amapae: C. ualida (Pichia membranifaciens): C. marw: C. amapae: C. krissii:

18(17). a D-Xylose assimilated b D-Xylose not assimilated

p. 479 p. 566 p. 523 p. 479 p. 517

Table 61 Key characters of Group XII Candida species with the following primary growth responses^: inositol -, nitrate -, erythritol -, 40'*C -, raffinose -, cellobiose -, trehalose Species

Glucose fermentation

Candida amapae

-

C

+

bombicola

C castellii

+

C. cylindracea

+

C diuersa

+

C. galacta

-

C

+

karawaiewii

Assimilation^ Gal

Xy

NAG

Growth'^ Gly

Lact

VF

50%G

0.01%

35T

37T

+ +

w

C. krissii

-

C krusei

+

C maris C. pararugosa

-

+

+

C

pseudolambica

+

+

-

C

rugopelliculosa

+

+

+

+

C. rugosa

-

+

+

C. siluae

+

+

V

C

-

+

V

C. sorboxylosa

+

+

V

C. ualida

V

C uinaria

-

C. uini

+

sorbophila

^ C. bombicola is the only sucrose-positive yeast in this group. C. maris is the only L-rhamnose-positive yeast in this group. ^ Abbreviations: Gal, galactose; Xy, D-xylose; NAG, 7V-acetyl-D-glucosamine; Gly, glycerol; Lact, DL-lactate. ^ Abbreviations: VF, in vitamin-free medium; 50%G, on 50%(w/w) glucose-yeast extract agar; 0.01%, with 0.01% cycloheximide.

476

Vc. Descriptions of anamorphic ascomycetous genera and species

Systematic discussion of the species

64.2. Candida albicans (Robin) Berkhout (1923)

64.1. Candida aaseri Dietrichson ex van Uden & H.R. Buckley (1970)

Synonyms: Oidium albicans Robin (1853) Saccharomyces albicans (Robin) Reess (1877) Monilia albicans Plant (1887) Dermatium albicans (Robin) Laurent (1889) Monilia albicans (Robin) Zopf (1890) Endomyces albicans (Robin) Vuillemin (1898) Parasaccharomyces albicans (Robin) Froilano de Mello (Froilano de Mello and Gonzaga Fernandes 1918) Monilia albicans (Robin) Zopf var. non-liquefaciens Sasakawa (1922) Myceloblastanon albicans Ota (1928) Endomyces albicans Okabe (1929) Endomycopsis albicans (Vuillemin) Dekker (Stelling-Dekker 1931) Mycotorula albicans (Robin) Langeron & Talice (1932) Syringospora albicans (Robin) Dodge (1935) Zymonema albicans (Okabe) Dodge (1935) Mycotorula albicans (Robin) Langeron & Talice var. uuillemini (Landrieu ex Castellani & Chalmers) Redaelli, Ciferri & Cavallero (1938) Procandida albicans (Robin) Novak & Zsolt (1961) Syringospora robinii Quinquaud (1868) Monilia Candida Plant (1885) [non Bonorden 1851] Saccharomyces buccalis Guidi (1896) Monilia buccalis Nino & Puglisi (1927) Zymonema buccalis (Nino & Puglisi) Dodge (1935) Saccharomyces tumefaciens-albus Foulerton (1900) Myceloblastanon tumefaciens-album Ota (1928) Cryptococcus harteri Gedoelst (1911) Parasaccharomyces harteri Verdun (1913) Monilia harteri (Verdun) Castellani & Chalmers (1913) Torulopsis harteri (Verdun) Redaelli (1931) Zymonema harteri (Verdun) Dodge (1935) Endomyces pinoyi Castellani (1912a) Monilia pinoyi (Castellani) Castellani & Chalmers (1913) Blastodendrion pinoyi (Castellani) Langeron & Talice (1932) Myceloblastanon pinoyi (Castellani) Ota (1928) Candida pinoyi (Castellani) Basgal (1931) Mycotorula pinoyi (Castellani) Saggese (1934) Endomyces faecalis Castellani (1912b) Parendomyces albus Queyrat & Laroche (1909) Monilia alba (Queyrat & Laroche) Brumpt (1913) Monilia decolorans Castellani & Low (1913) Myceloblastanon decolorans (Castellani & Low) Ota (1928) Castellania decolorans (Castellani & Low) Dodge (1935) Endomyces uuillemini Landrieu (1912) Guilliermondella uuillemini (Lindau) Dodge (1935) Endomyces pulmonalis Castellani (1913) Endomyces pulmonalis Senez (1918) [non Castellani 1913] Monilia pulmonalis (Castellani) Castellani & Chalmers (1913) Candida pulmonalis (Castellani) Basgal (1931) Castellania pulmonalis (Castellani) Dodge (1935) Saccharomyces unguium Bourgeois (1915) Oidiomyces unguium Frei (1921) Onychomyces unguium Ota (1924a) nom. nud. Monilia metchnikoffi Castellani (1916) Castellania metchnikoffi (Castellani) Dodge (1935) Monilia balcanica Castellani (1916) Monilia psilosis Ashford (1917) Myceloblastanon psilose (Ashford) Ota (1928) Candida psilosis (Ashford) de Almeida (1933) Syringospora psilosis (Ashford) Dodge (1935) Parasaccharomyces ashfordi Anderson (1917) Myceloblastanon ashfordi (Anderson) Ota (1928) Monilia ashfordi (Anderson) Langeron & Talice (1932) Monilia alba Castellani & Chalmers (1919) Castellania alba (Castellani & Chalmers) Dodge (1935)

Synonym: Azymocandida aaseri (Dietrichson) Novak & Zsolt (1961)

Growtli in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are elongate, (2.5-3.0)x(7.015.0) |im, in chains and clusters. A thin powdery pellicle may be present. Dalmau plate culture on corn meal agar: After 7 days at 25''C, primitive pseudohyphae are present and consist of branched chains of elongate, sometimes rather curved cells. Aerobic growth is cream-colored, dull, soft and mostly smooth. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + 1 + + + + +/1

-

1

-

+ +

-

+

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

-

+ + + + 1

-

+ +

-

Additional assimilation tests and other g;roi characteristics 2-Keto-D-gluconate L-Lysine + 5-Keto-D-gluconate n Ethylamine Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose + Xylitol 10% NaCl/5% glucose L-Arabinitol + Starch formation Arbutin + Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine + Growth at 3 7 T Creatinine Growth at 4 0 T ^ Utilization of D-glijcosamine as a source of nitrogen. Co-Q: 9 (Shin et al. 1996). Mol% G + C: 37.1, CBS 1913 {T^ ;. Meyer and Phaff 1972).

+

-

n

+

-

+

-

Origin of the Strain studied: CBS 1913, s]put Norway. Type strain: CBS 1913. Comments: Kurtzman and Robnett (1997) found C. aaseri and C butyri to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, thus indicating the two taxa to be conspecific.

64. Candida Berkhout / S.A. Meyer et al. Monilia metalondinensis Castellani & Chalmers var. alba (Castellani & Chalmers) Castellani (1937a) Monilia metalondinensis Castellani & Chalmers (1919) Candida metalondinensis (Castellani & Chalmers) Berkhout (1923) Myceloblastanon metalondinense (Castellani & Chalmers) Ota (1928) Castellania metalondinensis (Castellani & Chalmers) Dodge (1935) Candida albicans (Robin) Berkhout var. metalondinensis (Castellani & Chalmers) Ciferri (1960) Monilia bethaliensis Pijper ex Castellani & Chalmers (1919) Myceloblastanon bethaliensis Ota (1928) Candida bethaliensis (Pijper) Dodge (1935) Endomyces tropicalis Acton (1919) [non Castellani 1911] Actonia tropicalis (Acton) Dodge (1935) Monilia nabarroi Castellani & Chalmers (1919) Myceloblastanon nabarroi (Castellani & Chalmers) Ota (1928) Castellania nabarroi (Castellani & Chalmers) Dodge (1935) Monilia pinoyi (Castellani) Castellani & Chalmers (1913) var. nabarroi Castellani & Chalmers) Castellani (1937a) Monilia pseudolondinensis Castellani & Chalmers (1919) Castellania pseudolondinensis (Castellani & Chalmers) Dodge (1935) Monilia metalondinensis Castellani & Chalmers var. pseudolondinensis (Castellani & Chalmers) Castellani (1937a) Monilia pseudolondinoides Castellani & Chalmers (1919) Castellania pseudolondinoides (Castellani & Chalmers) Dodge (1935) Monilia pseudometalondinensis Castellani & Chalmers (1919) Castellania pseudometalondinensis (Castellani & Chalmers) Dodge (1935) Endomyces actoni Vuillemin (Nannizzi 1934) Monilia actoni (Vuillemin) Vuillemin (1931) Monilia pseudoalbicans Neveu-Lemaire (1921) Myceloblastanon pseudoalbicans (Neveu-Lemaire) Ota (1928) Mycoderma pseudoalbicans (Neveu-Lemaire) Dodge (1935) Cryptococcus copellii Froilano de Mello (Froilano de Mello and Gonzaga Fernandes 1918) Cryptococcus copellii Neveu-Lemaire (1921) Myceloblastanon copellii (Neveu-Lemaire) Ota (1928) Torulopsis copellii (Neveu-Lemaire) de Almeida (1933) Castellania copellii (Neveu-Lemaire) Dodge (1935) Endomyces molardi Salvat & Fontoynont (1922) Zymonema molardi (Salvat & Fontoynont) Dodge (1935) Cryptococcus laryngitidis Sartory, Petges & Claque (1923) Atelosaccharomyces laryngitidis (Sartory, Petges & Claque) Dodge (1935) Monilia butantanensis Gomes (1924) Candida butantanensis (Gomes) Langeron & Talice (1932) Parendomyces butantanensis (Gomes) Dodge (1935) Myceloblastanon cutaneum Ota (1924a) Mycelorrhizodes cutaneum Ota (1924a) Monilia cutanea (Ota) Nannizzi (1934) [non Castellani & Chalmers 1913] Blastodendrion cutaneum (Ota) Dodge (1935) Syringospora cutanea Dodge (1935) Myceloblastanon gruetzii Ota (1924a) Mycelorrhizodes gruetzii Ota (1924a) Myceloblastanon favrei Ota (1925) Cryptococcus faurei (Ota) Pollacci & Nannizzi (1929) Blastodendrion faurei (Ota) Langeron & Talice (1932) Candida favrei (Ota) de Almeida (1933) Myceloblastanon gifuense Taniguchi (1926) Blastodendrion gifuense (Taniguchi) Dodge (1935) Blastodendrion intestinale Mattlet (1926) Parasaccharomyces intestinalis (Mattlet) Dodge (1935) Monilia richmondi Shaw (1926) Castellania richmondi (Shaw) Dodge (1935) Mycotorula tonsillae Carnevale-Ricci & Redaelli (Carnevale-Ricci 1926) 1 Cryptococcus tonsillarum Nannizzi (1934)

471

Monilia aldoi Pereira Filho (1927) Mycotoruloides aldoi (Pereira) Langeron & Talice (1932) Candida aldoi (Pereira) Castellani & Jacono (1933) Monilia fioccoi Pollacci & Nannizzi (1928) Myceloblastanon skutetzkyi Ota (1928) Mycocandida skutetzkyi (Ota) Dodge (1935) Monilia mannitofermentans Castellani (1929) Castellania mannitofermentans (Castellani) Dodge (1935) Monilia periunguealis Niiio (1930) Parendomyces periunguealis (Niiio) Dodge (1935) Mycotorula periunguealis Niiio (1938) Monilia aluarezsotoi Mazza & Nino (Mazza, Nino, Quintana and Bernasconi 1931) Zymonema aluarezsotoi (Mazza & Nino) Dodge (1935) Mycotorula aluarezsotoi (Mazza & Niiio) Niiio (1938) Monilia uaginalis Mazza & de los Rios (1931) Blastodendrion erectum Langeron & Talice (1932) Mycotoruloides oualis Langeron & Talice (1932) Mycotoruloides triadis Langeron & Talice (1932) Monilia triadis (Langeron & Talice) Castellani (1937a) Candida triadis (Langeron & Talice) Langeron & Guerra (1938) Monilia inexorabilis Mazza & Palamedi (1932) Syringospora inexorabilis (Mazza & Palamedi) Dodge (1935) Blastodendrion oosporoides Zach (Wolfram and Zach 1934a) Parasaccharomyces oosporoides (Zach) Dodge (1935) Cryptococcus pinoysimilis Castellani (1933) Blastodendrion pinoysimilis (Castellani) Castellani & Jacono (1933) Candida pinoysimilis (Castellani) Castellani & Jacono (1933) Monilia pinoysimilis (Castellani) Castellani & Jacono (1933) Mycocandida pinoysimilis (Castellani) Redaelli & Ciferri (Ciferri and Redaelli 1935) Candida desidiosa Ciferri & Redaelli (1935) Mycoderma desidiosum (Ciferri & Redaelli) Dodge & Moore (1936) Candida mycotoruloidea Redaelli & Ciferri (Ciferri and Redaelli 1935) Mycotorula sinensis Reiss (1935) Mycotorula verticillata Redaelli & Ciferri (Ciferri and Redaelli 1935) Parasaccharomyces colardi Dodge (1935) Syringospora hasegawae Dodge (1935) Syringospora negroni Dodge (1935) Zymonema album Dodge (1935) Monilia stellatoidea Jones & Martin (1938) Candida stellatoidea (Jones & Martin) Langeron & Guerra (1939) Candida albicans (Robin) Berkhout var. stellatoidea (Jones & Martin) Diddens & Lodder (1942) Procandida stellatoidea (Jones & Martin) Novak & Zsolt (1961) Syringospora stellatoidea van der Walt (1970g) Candida truncata Vanbreuseghem (1948) Candida claussenii Lodder & Kreger-van Rij (1952) Syringospora claussenii van der Walt (1970a) Candida intestinalis Batista & Silveira (1959c) Candida biliaria Batista & Silveira (1959c) Procandida langeroni (Dietrichson) Novak & Zsolt (1961) Candida langeroni Dietrichson ex van Uden & H.R. Buckley (1970) Candida genitalis Batista & Silveira (1962) Procandida grubyii Novak & Vitez (1964) Candida nouuelii Saez (1973a)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoidal, (3.56.0)X(4.0-8.0) jim, single, in pairs, chains and clusters (Fig. 211). Dalmau plate culture on corn meal agar: After 7 days at 25°C, well-differentiated, branched pseudohyphae with chains or clusters of blastoconidia and septate hyphae are

478

Vc. Descriptions of anamorphic ascomycetous genera and species

present. Pseudohyphae of the "Mycotorula" type are often observed - grape-like clusters of blastoconidia occurring along the pseudohyphal chains. Chlamydospores are usually present. A few strains fail to form pseudohyphae when first isolated, however, most of them demonstrate this ability after being maintained in culture. Aerobic growth is white to cream-colored, glistening, usually butyrous, soft, and smooth; sometimes growth is membraneous.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

-/s + + + V V

+

-

+/1

-

V

-

+ + V V

-/I

-

V

Lactose Raffinose Trehalose

V

Fig. 211. C. albicans, CBS 562. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 [im. iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ V

V

-

+ +/1 V

-

-/I + + +

-

1

-

-/I

Additional assimilation tests and other g;roYV characteristics:

2-Keto-D-gluconate + + L-Lysine 5-Keto-D-gluconate n Ethylamine + V Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose V + Xylitol 10% NaCl/5% glucose V L-Arabinitol -/I Starch formation Arbutin Urease Propane 1,2 diol V Biotin-free -/I V Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at 37T + Creatinine Growth at 40''C + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 34.9, CSAV 29-31-1; 35.1, CBS 2712; 35.7, CBS 1905; 36.9, CBS 1899 {T^: Stenderup and Bak 1968); 34.4-35.4, 7 strains (Nakase and Komagata 197If); 35.9-37.3, 4 strains {T^: Meyer and Phaff 1972); 34.3-35.6; 15 strains {T^\ Meyer et al. 1984); 32.6-34.2, 34 strains {T^\ Kamiyama et al. 1989); 35.6, 35.9, 2 strains (7;^: Su and Meyer 1991).

Origin of the strains studied: CBS 562, skin infection (Mackinnon 1936); CBS 1894, soil, New Zealand; CBS 1899, skin, received as C truncata (Vanbreuseghem 1948); CBS 1905, type of Monilia stellatoidea; CBS 1912, from sputum, type of C langeroni; CBS 1918, probably human, N.F. Conant; CBS 1949, type of C claussenii and Syringospora claussenii; CBS 2316, CBS 2689,

interdigital mycosis, type of Mycelohlastanon gruetzii; CBS 2691, pharyngitis, received as Saccharomyces tumefaciens-albus; CBS 2693, nail; CBS 2694, unknown; CBS 2695, sprue, authentic strain of Monilia psilosis; CBS 2697, sputum, type of Mycotoruloides triadis; CBS 2703, tonsillo-pharyngitis, type of C mycotoruloides; CBS 2707, blastomycosis, type of Monilia alvarezsotoi; CBS 2711, sputum, type of Monilia richmondii; CBS 2721, unknown; CBS 2738, child's mouth; CBS 2740, from leaf; CBS 2770, unknown; CBS 2990, sputum; CBS 5137, sputum, type of Syringospora stellatoidea; CBS 5982, serotype A; CBS 5983, serotype B; CBS 5990, vagina; CBS 6073, sputum; CBS 6431, bronchomycosis; CBS 6552, pharynx of Cephalopus dorsalis, type of C nouvelii; CBS 6589, vagina; CBS 6910, urine. Type strain: CBS 562, neotype, designated by Diddens and Lodder (1942). Comments: C. albicans is the most studied of all Candida species. The essence of much of the research is to ascertain the opportunistic or pathogenic aspects of this species, the ways to deal with the microbe/patient relationship and the epidemiology. A significant number of C. albicans strains are isolated routinely from clinical sources. The degree of variability has been reported repeatedly using various techniques. The terms 'typical' and 'atypical' frequently appear in publications. Besides the usual morphological and physiological characterizations as described above, C albicans has been studied with numerous molecular biological techniques to determine strain identity and strain variability: restriction fragment length polymorphisms (RFLPs), karyotypes, DNA probes, randomly amplified polymorphic DNA (RAPD) analysis, nuclear DNA reassociation, mitochondrial DNA RFLPs, size and mol% G + C, protein electrophoretic profiles, as well as the phylogenetically determining criterion, ribosomal RNA gene sequences. The conspecificity of C. albicans and C. stellatoidea was established by DNA reassociation (Meyer 1979), supported by other studies (immunoelectrophoretic analysis, Montrocher 1980) and confirmed by additional

479

64. Candida Berkhout / S.A. Meyer et al.

DNA reassociation studies (Kamiyama et al. 1989). Nevertheless, Kwon-Chung et al. (1988) showed two distinct karyotype profiles for strains of C stellatoidea. They were designated type I and type II. Mahrous et al. (1990) demonstrated that phenotypically diverse strains of C albicans, whose identification was verified by DNA reassociation, had varying karyotypes. Sullivan et al. (1995) showed that the nucleotide sequences of the V3 region of the ribosomal RNA genes of C stellatoidea type I and type II are identical and differed from five other strains of C. albicans at one or two nucleotide positions. Sullivan et al. (1995) described C. dubliniensis, a new species isolated from sixty HIV-infected and three HIV negative persons, that closely resembles C albicans. C. dubliniensis is germ tube positive and produces chlamydospores in abundance. It is serotype A and its physiological profile shows few differences compared with four reference strains (C. albicans serotype A and serotype B; C stellatoidea type I and type II). Several molecular biological techniques (DNA fingerprinting, DNA probing, RAPD analysis, karyotyping, rRNA gene sequencing) were employed to compare strains of this species with C albicans reference strains. The results showed that the strains of C dubliniensis were distinct from the C albicans strains. The most convincing evidence that C dubliniensis is distinct from C albicans is the number of nucleotide differences (13-15) in the ribosomal RNA gene sequences. However, Sullivan et al. (1995) did not compare their strains with strains representing the many synonyms of C. albicans, so it is possible that the species may be found to be synonymous with an earlier described species. 64.3. Candida amapae Morals, Rosa, S.A. Meyer, Mendon^a-Hagler & Hagler (1995) The following description is taken from the original description (Morals et al. 1995). Growth in malt extract: After 3 days at 25T, the cells are large and globose to elongate. After four weeks, a sediment and a thick ring are present. Growth on malt extract agar: After 3 days, cells are pleomorphic and cylindrical to elongate. Well-developed, moderately branched pseudohyphae are also present. The streak culture is dry, white, cottony, rough with a smooth center and an irregular fringed margin. After 10 days, the growth is off-white, smooth and with a rugose lobate margin that is fringed with pseudomycelium. Dalmau plate culture on corn meal agar: After 5 days at 25''C, abundant pseudohyphae are present. After 1020 days, rare true hyphae are observed. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + v

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

n n + v v n +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Glucono-6-lactone Ethylacetate Nitrite Cadaverine L-Lysine Ethylamine 50% Glucose 10% NaCl Starch formation Co-Q: Not determined. Mol% G + C: 38.8, CBS

-

Urease Growth without ine Growth without Growth without Growth without tryptophane Growth at 28°C Growth at 3TC

methion-

-

cysteine histidine + DL+ +

7872 {T^: Morals et al. 1995).

Origin of the strains studied: CBS 7872 (type strain) and 13 other strains, fallen fruit of Pamhancornia amapa, Mocambo forest, Belem, Para, Brazil. Type strain: CBS 7872. Comments: Morals et al. (1995) studied 14 strains of this species. Only one strain grew on succinate, citrate and glucosamine. This species is very similar to C sorboxylosa and also to species of Issatchenkia. What differentiates C. amapae from these yeasts is its absolute requirement for the sulfur-containing amino acids methionine and cysteine. 64.4. Candida anatomiae (Zwillenberg) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis anatomiae Zwillenberg (1966)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to short-ovoidal, (3.0-5.0) X (3.0-7.0) |im, single, in pairs and short chains. Dalmau plate culture on corn meal agar: After 7 days at 25°C, primitive pseudohyphae of short chains of cells are sometimes present. Aerobic growth is white to creamcolored, soft, glistening, smooth and entire.

480

Vc. Descriptions of anamorphic ascomycetous genera and species

Fermentation: Glucose Galactose Sucrose Maltose

Jj-^-^

+ -

Lactose Raffinose Trehalose

+ +/1 + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate + D-Glucosamine (N)^ 5-Keto-D-gluconate n 50% Glucose Saccharate 10% NaCl/5% glucose D-Glucoronate Starch formation Xylitol Urease L-Arabinitol Biotin-free Arbutin + Pyridoxine-free Propane 1,2 diol 1 0.01% Cycloheximide Butane 2,3 diol 1 0.1% Cycloheximide Nitrite + Growth at 25''C Cadaverine + Growth at 30°C Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.0, CBS 5547 {T^ : Meyer et al. 1984).

Origin of the strains studied: embalmed in formalin. Type strain: CBS 5547.

CBS 5547, corpse

64.5. Candida ancudensis C. Ramirez & A. Gonzalez (19841) Growth in glucose-yeast extract-peptone broth: After 3 days at 25T, the cells are ovoidal, (2.5^.5)x(5.08.0)jJim; a few cells are elongate and polymorphic and single or in pairs (Fig. 212). Dalmau plate culture on corn meal agar: After 7 days at 25°C, short primitive pseudohyphae are present. Aerobic growth is white to cream-colored, butyrous and entire. Fermentation: absent.

Fig. 212. C. ancudensis, CBS 8184. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 |J,m.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1 + +/1 1 1 + 1

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine + -

5-Keto-D-gluconate n Ethylamine + D-Glucosamine (N)^ Saccharate D-Glucuronate 50% Glucose 10% NaCl/5% glucose + Xylitol Starch formation L-Arabinitol Arbutin + Urease + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol + 0.1% Cycloheximide + Nitrite Cadaverine + Growth at 25''C + Growth at 30''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. ; O'Neill and Meyer, unpubli Mol% G + C: 42.0, CBS 8184 ( T {. data).

Origin of the strains studied: CBS 8184, from rotten Drimys winteri, Chile. Type strain: CBS 8184. Comments: Kurtzman and Robnett (1997) found C petrohuensis, C. ancudensis and C drimydis to have identical sequences in a 600-nucleotide region at the 5' end of large

64. Candida Berkhout / S.A. Meyer et al.

subunit (26S) rDNA, thus indicating the three taxa to be conspecific. ^'~^'
64.6. Candida antillancae C. Ramirez & A. Gonzalez (1984a) Synonym: Candida bondarzewiae C. Ramirez & A. Gonzalez (1984a)

Growth in glucose-yeast extract-peptone broth: After 3 days at 20^C, the cells are ovoidal, (3.0-4.5)x(3.510.0) ^m, single, in pairs and small groups (Fig. 213). Dalmau plate culture on corn meal agar: After 7 days at 22*^0, primitive to well-developed pseudohyphae are evident. Aerobic growth is white to cream-colored, butyrous, soft and entire. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 1 1 + 1

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

1 1

-

1

-

+/1 -/I

-

Additional assimilation tests and other g rowt characteristics: +/w 2-Keto-D-gluconate L-Lysine -

5-Keto-D-gluconate n Ethylamine Saccharate D-Glucosamine (N)^ 50% Glucose D-Glucuronate Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease s Propane 1,2 diol + Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.1%) Cycloheximide Cadaverine + Growth at 25°C Growth at WC Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.0, CBS 8171 (Tj^: Meyer, unpublished data).

i*--i'

**<.^

+

-

+ + w

-

t

"m;"'

#

Fig. 213. C. antillancae, CBS 8171. After 3 days in glucose-yeast extract-peptone broth at 20''C. Bar = 5 jim.

Comments: The strains examined grow poorly at 25''C, therefore, most tests were incubated at 17-20''C. Dalmau plate cultures were incubated at 22°C. Some assimilation responses differ from those in the original descriptions of C antillancae and C. bondarzewiae. Primarily, latent growth was evident in galactose, sucrose, cellobiose, salicin and lactic acid for C. antillancae and latent growth on cellobiose, salicin, arbutin and mannitol was noted for the strain of C bondarzewiae, as well as positive responses on glycerol. These two yeasts are nearly identical in the tested morphological and physiological properties. In addition, Kurtzman and Robnett (1997) found C antillancae, C. bondarzewiae and C tepae to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, thus indicating the three taxa to be conspecific.

64.7. Candida apicola (Hajsig) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Torulopsis apicola Hajsig (1958) Torulopsis bacillaris (Kroemer & Krumbholz) Lodder var. obesa Y. Ohara, Nonomura & Yunome (1960a)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are spherical to ovoidal, (1.5-2.5)X(3.0^.0) |im, and occur singly and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is yellowish to cream-colored, glistening, soft, smooth and entire. Fermentation:

Origin of the strains studied: CBS 8170, CBS 8171 (type strain, C bondarzewiae) rotten wood, Chile. Type strain: CBS 8170.

^

Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

482

Vc. Descriptions of anamorphic ascomycetous genera and species

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/1 + + V v -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ -/I + -/I + + v v v -

Additional assimilation tests and other growth characteristics: Ethylamine + 2-Keto-D-gluconate -/I D-Glucosamine (N)^ 5-Keto-D-gluconate n 50% Glucose + Saccharate n 10% NaCl/5% glucose n D-Glucuronate Starch formation Xylitol -/I Urease L-Arabinitol -/I Biotin-free Arbutin Pyridoxine-free + Propane 1,2 diol 0.01% Cycloheximide Butane 2,3 diol Growth at 3 0 ^ +/w Nitrite Growth at 35''C v Cadaverine + Growth at 37°C Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (F.-L. Lee et al. 1993). Mol% G + C: 46.3, CBS 2868 {T^ : Stenderup et al. 1972); 44.3, CBS 2868 (HPLC: F.-L. Lee et al. 1993)

Origin of the strains studied: CBS 1887, CBS 1888, CBS 1889, pickled cucumbers, U.S.A.; CBS 2868, 2869, bee's gut; CBS 4078, grape must, type of Torulopsis bacillaris var. obesa; CBS 4353, sugar. Type strain: CBS 2868. 64.8. Candida apis (Lavie ex van Uden & VidalLeiria) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Paratorulopsis apis (Lavie) Novak & Zsolt (1961) Torulopsis apis Lavie ex van Uden & Vidal-Leiria (1970)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoidal, (2.0-4.0)X(3.0-7.0) |im, single, in pairs and short chains (Fig. 214).

Fig. 214. C. apis, CBS 2674. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 |im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+ 1

-

+

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +/1

-

+ +

-

+

-

+

-

atioi1 tests and other g;row -

n

-

+

-

+

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide Growth at 30T Growth at 35T Growth at 37T

+

-

+ +

-

+

-

+ w

-

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (F.-L. Lee et al. 1993). Mol% G + C: 48.8, CBS 2674 (BD: Stenderup et al. 1972); 45.6, CBS 2674 (HPLC: F-L. Lee et al. 1993).

Origin of the strain studied: CBS 2674, from bees. Type strain: CBS 2674.

Dalmau plate culture on corn meal agar: After 14 days at 25°C, primitive pseudohyphae of short chains Comments: This species no longer has the variety of cells are sometimes present. Aerobic growth is cream- galacta. F.-L. Lee et al. (1993) found that the mol% G + C contents of C. apis var. apis and C apis var. galacta colored to beige, soft, smooth and entire. differed by 5.6% and Co-Q also differed, 9 and 8, Fermentation: absent. respectively. DNA reassociation confirmed the lack of

64. Candida Berkhout / S.A. Meyer et al.

483

relatedness between these two organisms. These investigators recognized C apis var. galacta as the distinct species, C galacta.

Origin of the strain studied: CBS 5263, shrimp eggs from the North Atlantic Ocean. Type strain: CBS 5263.

64.9. Candida atlantica (Siepmann) S.A. Meyer & Simione ex S.A. Meyer & Yarrow (1998)

64.10. Candida atmosphaerica Santa Maria (1959c) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are ovoidal to cylindrical, (1.5-3.0)x(3-12)[i,m, single, in pairs and chains. Dalmau plate culture on corn meal agar: After 7 days at 25*'C, well-developed pseudohyphae of long, branched chains of cells, usually with few blastoconidia, are present. Aerobic growth is white to cream-colored, soft, smooth and butyrous. Fermentation:

Synonyms: Trichosporon atlanticum Siepmann (Siepmann and Hohnk 1962) Candida atlantica (Siepmann) S.A. Meyer & Simione (1978) nom. inval.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoidal, (2.55.0)x(2.5-6.0)|i,m, and single, in pairs, short chains and small clusters. Dalmau plate culture on corn meal agar: After 7 days at 25°C, primitive to well-developed pseudohyphae are formed. Aerobic growth is cream-colored, somewhat glistening and soft with some 'craters' in the central area of the streak. The margin is entire. Fermentation: Glucose Galactose Sucrose Maltose

w/-

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + + + + n -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate -/I Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 30°C Cadaverine + Growth at 35°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 35.8, CBS 5263 (7;^ : Meyer et al. 1984).

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s -Is -Is -Is

Lactose Raffinose Trehalose

+ + +/1 + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + +/1 + +

+ + + + + + + +/1 +

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate L-Lysine 5 -Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine Growth at 30°C Creatinine Growth at 35T ^ Utilization of D-glucosamine as a source of nitrogen, Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 39.0, 38.4, CBS 4547 {T^: Meyer and Phafif 1972, HPLC: C.-E Lee et al. 1993, respectively), 39.7, CSAV 29-50-1 {T^: Stenderup and Bak 1968); 38.8, AJ 5107 {T^\ Nakase and Komagata 1971f).

Origin of the strains studied: CBS 4547, atmosphere; CBS 7170, fruiting body of a fungus (Tyromyces ptychogaster) on a fallen tree trunk. Type strain: CBS 4547. Comments: Triangular to clover-leaf shaped cells may

484

Vc. Descriptions of anamorphic ascomycetous genera and species

be found on some media. DNA reassociation experiments CBS 6920, from alpechin (waste from production of olive confirmed that this species was not a synonym of oil), Spain. Type strain: CBS 6913. C diddensiae (Meyer and Simione 1978). C.-F. Lee et al. (1993) showed insignificant DNA relatedness between C atmosphaerica and C. dendronema and between 64.12. Candida austromarina (Fell & I.L. Hunter) C. atmosphaerica and C terebra. S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: 64.11. Candida auringiensis Santa Maria (1978) Torulopsis austromarina Fell & I.L. Hunter (1974) Growth in glucose-yeast extract-peptone broth: Growth in glucose-yeast extract-peptone broth: After 3 days at 25"C, the cells are ovoidal, (2.5^.0)x(3.0After 3 days at IS'^C, the cells are globose to ovoidal, (4.05.0) (im, single and in pairs. Some cells may be teardrop6.0) X (4.0-7.0) |im, single and in pairs. The buds may be shaped. on short stalks. A sediment is present, but no ring or Dalmau plate culture on corn meal agar: After pellicle. 7 days at 25''C, primitive to well-developed pseudohyphae Dalmau plate culture on corn meal agar: After 7 days are present. Aerobic growth is white, creamy, smooth and at IS^'C, pseudohyphae are not present. Aerobic growth is glistening. The margin is mostly entire with an occasional white, smooth, soft, with an entire margin. tuft of mycelial growth. Fermentation: Glucose -/s Lactose Fermentation: + Lactose Glucose s Galactose Raffinose + Raffinose Galactose Sucrose Trehalose Sucrose Trehalose +/s Maltose Cellobiose Maltose s Assimilation: Glucose + A'^-Acetyl-D-glucosamine n Assimilation: Galactose + Methanol Glucose + iV-Acetyl-D-glucosamine n L-Sorbose Ethanol V Galactose + Methanol Sucrose Glycerol 1 L-Sorbose + Ethanol + Maltose Erythritol Sucrose Glycerol + Cellobiose Ribitol + Maltose Erythritol Trehalose +/1 Galactitol Cellobiose + Ribitol + D-Mannitol Lactose Trehalose + Galactitol + Melibiose D-Glucitol Lactose D-Mannitol + + Raffinose a-Methyl-D-glucoside Melibiose + D-Glucitol Melezitose Salicin Raffinose a-Methyl-D-glucoside Inulin D-Gluconate V Melezitose Salicin + Soluble starch DL-Lactate Inulin D-Gluconate 1 D-Xylose + Succinate Soluble starch DL-Lactate L-Arabinose Citrate D-Xylose + Succinate + D-Arabinose Inositol + L-Arabinose Citrate D-Ribose Hexadecane n D-Arabinose 1 Inositol + L-Rhamnose Nitrate D-Ribose -/I Hexadecane n Vitamin-free D-Glucosamine L-Rhamnose Nitrate + D-Glucosamine Vitamin-free Additional assimilation tests and other growth Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate V L-Lysine characteristics: 5-Keto-D-gluconate n Ethylamine L-Lysine 2-Keto-D-gluconate + + Saccharate n D-Glucosamine (N)^ n Ethylamine + 5-Keto-D-gluconate D-Glucuronate 50% Glucose n Saccharate D-Glucosamine (N)^ + Xylitol 10% NaCl/5% glucose D-Glucuronate 1 50% Glucose + L-Arabinitol Starch formation + 10% NaCl/5% glucose n Xylitol Arbutin Urease + L-Arabinitol Starch formation Propane 1,2 diol Biotin-free -/I Arbutin + Urease _ Butane 2,3 diol Pyridoxine-free + Propane 1,2 diol Biotin-free _ + Nitrite 0.01% Cycloheximide Butane 2,3 diol Pyridoxine-free + Cadaverine Growth at 2 5 T Nitrite 0.1% Cycloheximide + Creatinine Cadaverine + Growth at 37°C + ^ Utilization of D-glucosamine as a source of nitrogen. Creatinine Growth at 40°C _ ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 40.2, CBS 6913 ; 40.0, CBS 6919 unpublished data).

Co-Q: Not determined. M o l % G + C: 39.0, 2 strains {T^: Meyer et al. 1984).

{T^,: Meyer,

Origin of the strains studied: CBS 6913, CBS 6919,

Origin of the strains Studied: Antarctic Ocean. Type strain: CBS 6179

CBS 6179, 6588,

485

4. Candida Berkhout / S.A. Meyer et al.

Comments: All tests reported here were conducted at Additional assimilation tests and other growth 15-17°C. The maximum temperature for growth of this characteristics: Ethylamine + species is 18-2rC. Kurtzman and Robnett (1997) found 2-Keto-D-gluconate D-Glucosamine (N)^ n C sake and C austromarina to have identical sequences 5-Keto-D-gluconate 50% Glucose Saccharate in a 600-nucleotide region at the 5' end of large subunit D-Glucuronate 10% NaCl/5% glucose (26S) rDNA, indicating the two taxa to be conspecific. Starch formation Xylitol + 64.13. Candida azyma (van der Walt, E. Johannsen & Yarrow) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis azyma van der Walt, E. Johannsen & Yarrow (1978)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are ovoidal to long ovoidal, (2.0^.0)X(5.0-9.0) fxm, single, in pairs or short chains (Fig. 215). Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae, if present, consist of branched chains of ovoid cells. Aerobic growth is slightly beige to cream-colored, smooth and shiny. The margin may be smooth to undulating. Fermentation: absent. + + + + + + + + -/I -/I -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Origin of the strains studied: CBS 6825, CBS 6826, lichen. South Africa. Type strain: CBS 6826. 64.14. Candida beechii H.R. Buckley & van Uden (1968) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are cylindroidal, (2.03.0)x(l 1.0-22.0) [im, single, in pairs and chains.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Urease L-Arabinitol 1 Biotin-free Arbutin Pyridoxine-free Propane 1,2 diol 0.1% Cycloheximide Butane 2,3 diol Growth at 3 0 T Nitrite +/w Growth at 35°C Cadaverine + Growth at 37°C Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 54.4, CBS 6826 {T^ : van der Wak et al. 1978).

+ + +/1 +/1 + + +

Fig. 215. C. azyma, CBS 6826. After 3 days in glucose-yeast extractpeptone broth at 2 5 T . Bar = 5 fxm.

Dalmau plate culture on corn meal agar: After 7 days at 25°C, primitive to well-developed pseudohyphae are present and consist of long branched chains of cells, usually without blastoconidia. Aerobic growth is off-white to cream-colored, shiny, delicately wrinkled, and soft with a mycelial edge. Fermentation:

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose 1 -Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch i)-Xylose I -Arabinose i)-Arabinose o=Ribose L-Rhamnose D-Glucosamine

+/1

vV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Vc. Descriptions of anamorphic ascomycetous genera and species

486

Additional assimilation tests and other growth characteristics:

L-Lysine + 2-Keto-D-gluconate + Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose s D-Glucuronate 10% NaCl/5% glucose n Xylitol 1 Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.1% Cycloheximide + Nitrite Growth at 30°C + Cadaverine + Growth at 35°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 41.2, CBS 4261 (BD:Meyer et al. 1984); 40.5, CBS 4261 {T^: Stenderup et al. 1972).

Fig. 216. C. bertae, CBS 8169. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 jim.

Origin of the strain studied: CBS 4261, cider, U.K. Type strain: CBS 4261. Comments: Kurtzman and Robnett (1997) found Additional assimilation tests and other growth C beechii and C. santamariae to have identical sequences characteristics: 1 L-Lysine + in a 600-nucleotide region at the 5' end of large subunit 2-Keto-D-gluconate 5-Keto-D-gluconate n Ethylamine + (26S) rDNA, indicating the two taxa to be conspecific. Saccharate D-Glucosamine (N)^ +

-

64.15. Candida bertae C. Ramirez & A. Gonzalez (1984c) Synonym: Candida bertae C. Ramirez & A. Gonzalez var. chiloensis C. Ramirez & A. Gonzalez (1984c)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (1.5-5.0)x(2.510.8) |im, and occur singly, in pairs and chains (Fig. 216). Pseudohyphae may be present. A pellicle and sediment are present. Dalmau plate culture on corn meal agar: After 7 days at 25''C, well-developed pseudohyphae are present. True hyphae may also be present. Aerobic growth is white to cream-colored, smooth, dull and with a serrated margin. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + V

+ V

+ + + +

-

+ + + + + +

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

-

+ + + +/1 + -/I + +/1 + + + +

D-Glucuronate 50% Glucose 10% NaCl/5% glucose + Xylitol L-Arabinitol + Starch formation Urease Arbutin + Biotin-free -/I Propane 1,2 diol V Pyridoxine-free + Butane 2,3 diol 0.1% Cycloheximide + + Nitrite Growth at 30''C + + Cadaverine Growth at 35T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 43.7, 44.4, CBS 8169; 43.9, 43.4, CBS 8168 (7;^: M.Th. Smith, personal communication; T^\ Tengku Zainal Mulok 1988, respectively).

Origin of the strains studied: CBS 8169, CBS 8168, rotten wood in Chile. Type strain: CBS 8169. Comments: At the time Ramirez and Gonzalez (1984c) described C bertae, they also described C. bertae var. chiloensis. The variety chiloensis was distinguished from the variety bertae on the basis of trehalose assimilation and the inability to utilize glycerol, ribitol, and salicin. We found that both varieties assimilate glycerol, ribitol and salicin, either well or latently. They differ in the assimilation of maltose and trehalose. The strain designated C bertae var. chiloensis grows well on maltose and trehalose, in contrast to the variety bertae which grows only latently or not at all. Other differences from the original description include the assimilation of L-sorbose, lactose, melezitose, D-ribose, and D-arabinose. Tengku Zainal Mulok (1988) found 97.6% DNA relatedness for these yeasts. We feel there are insufficient differences to warrant varietal status for the strain designated C bertae var. chiloensis.

64. Candida Berkhout / S.A. Meyer et al.

64.16. Candida berthetii Boidin, Pignal, Mermier & Arpin (1963)

487

64.17. Candida blankii H.R. Buckley & van Uden (1968) Synonym:

Growth in glucose-yeast extract-peptone broth: Candida hydrocarbofumarica K. Yamada, Furukawa & Nakahara ex C. Ramirez (1974) After 3 days at 25°C, the cells are globose to subglobose, (4.0-6.0) X (4.5-6.5) [im, single and in pairs. A dry pellicle Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are spheroidal to ovoidal is present. to elongate, (2.0-5.0)x(2.0-13.0) |im, and occur singly, in Dalmau plate culture on corn meal agar: After pairs and short chains. 7 days at 25''C, short densely branched pseudohyphae Dalmau plate culture on corn meal agar: After 7 days usually with verticils of globose blastoconidia are present. at 25°C, pseudohyphae consist of branched chains of cells Aerobic growth is off-white to cream-colored, soft, mostly with blastoconidia formed in verticils. True hyphae may be present. Aerobic growth is white to cream-colored, soft, smooth and the margin entire. and smooth to wrinkled. Fermentation: Fermentation: Glucose Galactose Sucrose Maltose

s -

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + -/I -/I + + + + n + +

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate -/I Ethylamine n 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol +/1 Pyridoxine-free Butane 2,3 diol -/I 0.1%) Cycloheximide Nitrite + Growth at ZTC Cadaverine + Growth at 40°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.8, type strain {T^ Stenderup et al. 1972).

+ + -

n + + + +

Origin of the strains studied: CBS 5452, CBS 5453, gum on tree; CBS 6112, CBS 6113, CBS 6229, insect tunnels. South Africa. Type strain: CBS 5452.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-Is -/s s -/s

Lactose Raffinose Trehalose

+ + + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V + + + + V +/1 + V

+/1 +

+/1 V

+ + +

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + L-Lysine 5-Keto-D-gluconate n Ethylamine Saccharate n D-Glucosamine (N)^ V D-Glucuronate + 50% Glucose +/1 Xylitol +/1 10% NaCl/5% glucose L-Arabinitol + Starch formation Arbutin + Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.1% Cycloheximide Cadaverine + Growth at 2>TC Creatinine Growth at 40T ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 55.1, CBS 1898 {T^: Meyer et al. 1984); 56.6, CBS 6734 (BD: Meyer et al. 1984); 56.6, AJ 5204 {T^: Nakase and Komagata 1971f); 54.1, CBS 6427, CBS 6788; 54.4, CBS 7205 {T^).

Origin of the strains studied: CBS 1898, mink, Canada; CBS 6734 (type strain of C hydrocarbofumarica); 6427, CBS 6788, CBS 6789, soil, Japan; CBS 7205, horse. New Zealand. Type strain: CBS 1898.

Vc. Descriptions of anamorphic ascomycetous genera and species

Comments: C hydrocarbofumarica is reduced to synonymy with C blankii because of the high degree (>90%) of nuclear DNA reassociation between the type strains in experiments conducted in the laboratories at the CBS and Georgia State University.

64.18. Candida boidinii C. Ramirez (1953) Synonyms: Candida koshuensis Yokotsuka & S. Goto (1955) Candida oliuarium Santa Maria (1958a) Candida alcomigas Urakami (1975) Candida methanolica Oki & Kounu (Oki et al. 1972) Candida methylica Trotsenko & Bykovskaya (Trotsenko et al. 1974) Hansenula alcolica Urakami (1975) Torulopsis enokii Urakami (1975) Candida queretana Herrera & Ulloa (1978) Candida silvicola Shifrine & Phaff var. melibiosica NowakowskaWaszczuk & Pietka (1983) Candida ooitensis Kumamoto & Seriu (Kumamoto et al. 1986)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are long-ovoidal to cylindrical, (2.0-4.0) x (4.0-20.0) [im, single, in pairs and chains. A pellicle is present. Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consisting of long branched chains of cells with verticils of ovoid blastoconidia are present. Septate hyphae may be present. Aerobic growth is off-white, cream-colored or beige, moist, shiny to dull, butyrous to membraneous, and with an irregular or a fringed margin.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

Lactose Raffinose Trehalose

-

+

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + +/1 + +

-

-

V

-

+ V

-/I V V V

-

+ +

-

+ +

-

V

-

Additional assimilation tests and other characteristics:

growth

V 2-Keto-D-gluconate Ethylamine + D-Glucosamine (N)^ 5-Keto-D-gluconate Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose + Starch formation Xylitol L-Arabinitol + Urease Arbutin Biotin-free Pyridoxine-free Propane 1,2 diol -/I + Butane 2,3 diol 0.1% Cycloheximide + V Nitrite + Growth at 35°C Cadaverine Growth at 37T V + Creatinine Growth at 4 0 ^ L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (J.-D. Lee and Komagata 1980a, Lin et al. 1995). Mol% G + C: 30.5, AJ 4778, 32.4, AJ 4939 (7;„: Nakase and Komagata 1971f), 33.0, CBS 2428 {T^: Meyer and Phaff 1972); 31.0, CBS 2428 & CBS 8051, 30.8, CBS 8030 (HPLC: C.-F. Lee et al. 1994b); 34.6, CBS 7299 {T^: Kumamoto et al. 1986); 35.6, CBS 8030 (7;^: Trotsenko et al. 1974); 31.0-32.9, 19 strains (HPLC: Lin et al. 1995).

Origin of the strains studied: CBS 2428, tanning fluid; CBS 2429, soil; CBS 3092, olives (type strain of C olwarium); CBS 5325, sea water; CBS 5777, wine (type strain of C. koshuensis); CBS 6056, ginger ale, U.S.A.; CBS 6202, floor of hospital ward in Finland; CBS 6295, soil; CBS 6368, washed soft-drink bottles; CBS 6990, tepache in Mexico (type strain of C queretana); CBS 7299, slimy mud in Japan (type strain of C. ooitensis); CBS 8051 (NRRL Y-8025), 8052 (NRRL Y-8023), unknown; CBS 8106, soil; CBS 8251, soil (type strain of C silvicola var. melibiosica); CBS 8030, soil, (type strain of C methylica). Type strain: CBS 2428. Comments: C methylica was added to the list of synonyms because of the significant DNA hybridization with the type strain of C boidinii (C.-F. Lee et al. 1994b). The type strain of C. methylica assimilates rhamnose and not ribose whereas all other strains of C boidinii assimilate ribose and not rhamnose. Kurtzman (personal communication) found the ribosomal RNA gene sequences to be identical for the type strains of C ooitensis and C. boidinii. Their morphological and physiological properties are nearly the same with the exception of nitrate utilization. This means that the type strain of C ooitensis is the only strain presently included in C. boidinii that is nitrate negative. Interestingly, C. ooitensis does assimilate nitrite. J.-D. Lee and Komagata (1983) compared the electrophoretic patterns of enzymes of C. boidinii strains and showed the presence of two distinct groups. Lin et al. (1996) employed several molecular and chemical techniques to examine nineteen strains of C. boidinii and found a high degree of genetic heterogeneity. The strains clustered into two groups according to their different electrophoretic enzyme patterns and profiles of the restriction digests of the rDNA spacer region. They also found a unique chromosomal banding pattern for each strain.

64. Candida Berkhout / S.A. Meyer et al.

489

64.19. Candida boleticola Nakase (1971b) Synonym: Candida ralunensis C. Ramirez & A. Gonzalez (1984f)

Growth in glucose-yeast extract-peptone broth: After 5 days at 25°C, the cells are ovoidal to elongate, (2.5-5.0)x(5.0-10.0)|im, and occur singly, in pairs and short chains (Fig. 217). The type strain forms a thin pellicle. Dalmau plate culture on corn meal agar: After 5 days at 25°C, well-developed pseudohyphae consisting of branched chains of cylindroidal cells with small verticils of ovoidal blastoconidia are present. Aerobic growth is off-white to cream-colored, dry, wrinkled, dull and with a fringed margin. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + V

V

+

-

+

V V

-

Lactose Raffinose Trehalose

-

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+

-

+/1 +/1 + +

-

+ +

-

+

V

-

+ +

-

-/I

Additional assimilation tests and other growth characteristics: V

Ethylamine + + 2-Keto-D-gluconate 5-Keto-D-gluconate + D-Glucosamine (N)^ V Saccharate n 50% Glucose V 10% NaCl/5% glucose D-Glucuronate + Starch formation Xylitol L-Arabinitol Urease + Arbutin Biotin-free + Pyridoxine-free Propane 1,2 diol Butane 2,3 diol 0.1% Cycloheximide + V Growth at 30°C Nitrite V Growth at 35T Cadaverine + Growth at 3TC Creatinine + L-Lysine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol%G + C: 43.2^4.1,, 3 strains {T^\ Nakase 1971b); 44.4, CBS 6420; 43.6, CBS 8179 {T^: Meyer, unpubhshed data).

Origin of the strains studied: CBS 6420, from the fruiting body of the fungus Astraeus hygrometricus; CBS 8179, type strain of C. ralunensis, rotten trunk of Laurelia sempervirens, Chile.

Fig. 217. C. boleticola, CBS 6420. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 [im.

Type strain: CBS 6420. Comments: Kurtzman and Robnett (1997) found C. laureliae and C ralunensis to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA and to differ by only one nucleotide from C. boleticola, thus indicating the three taxa to be conspecific. C. boleticola assimilates L-sorbose, D-arabinose, D-ribose, D-glucosamine, and D-gluconate, grows on high osmotic pressure media (50% glucose and 10% NaCl/5%) glucose) and grows at BS^'C; C. ralunensis does not assimilate these compounds and is unable to grow on high osmotic pressure media and at 30°C. 64.20. Candida bombi Montrocher (1967) Growth in glucose-yeast extract-peptone broth: After 3 days at 25"C, the cells are ovoidal, (2.0^.0)x (4.06.0) |im, single, in pairs and small groups (Fig. 218). Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae may be sparse or consist of branched chains of cells, sometimes with verticils of blastopores. Aerobic growth is cream-colored to light tan, smooth and soft with an entire to slightly irregular margin.

Fig. 218. C. bombi, CBS 5836. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 (im.

Vc. Descriptions of anamorphic ascomycetous genera and species

490

Fermentation:

Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+ + + 1 + -

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + -

Additional assimilation tests and other growth characteristics:

L-Lysine + 2-Keto-D-gluconate Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose + D-Glucuronate 10% NaCl/5% glucose + Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 37''C + Cadaverine + Growth at 40''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (F.-L. Lee et al. 1993). Mol% G + C: 48.3, 46.6, CBS 5836 {T^: Meyer and Phaff 1972; HPLC: F.-L. Lee et al. 1993, respectively).

Origin of the strain studied: CBS 5836, bumble bee {Bomhus sp.). Type strain: CBS 5836. 64.21. Candida bombicola (J.F.T. Spencer, Gorin & Tulloch) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis bombicola J.F.T. Spencer, Gorin & Tulloch (1970)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are ovoidal to elongate, (1.5-2.5)X(3.0-5.0) |im, single and in pairs (Fig. 219). Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae are absent or consist of very short densely branched chains of cells. Aerobic growth is cream-colored to gray, smooth, shiny, convex with an entire to undulating margin.

Fig. 219. C. bombicola, CBS 7267. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 jim.

Fermentation: Glucose Galactose Sucrose Maltose

s + -

Lactose Raffinose Trehalose

+ +/1 1 + -/I -/I -

A'^-Acetyl-D-glucosamine Methanol Ethanol + Glycerol + Erythritol Ribitol Galactitol D-Mannitol + D-Glucitol +/1 a-Methyl-D-glucoside SaHcin D-Gluconate 1 DL-Lactate Succinate 1 Citrate -/I Inositol Hexadecane Nitrate Vitamin-free -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics:

Ethylamine + 2-Keto-D-gluconate D-Glucosamine (N)^ 5-Keto-D-gluconate n Saccharate 50% Glucose + D-Glucuronate 10% NaCl/5% glucose + Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free 1 Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide 1 Nitrite 0.1% Cycloheximide Cadaverine + Growth at 3ST w/Creatinine Growth at 37T L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (F.-L. Lee et al. 1993). Mol% G + C: 49.8, CBS 6009 {T^ : Stenderup et al. 1972); 46.6, CBS 6009 (HPLC: F.-L. Lee et al. 1993),

Origin of the strains studied: CBS 6009, honey of

491

64. Candida Berkhout / S.A. Meyer et al.

bumble bee (Bombus sp.); CBS 7267, concentrated grape 64.23. Candida butyri Nakase (1971b) juice, South Africa. Growth in glucose-yeast extract-peptone broth: Type strain: CBS 6009. After 3 days at 25°C, the cells are subglobose, ovoidal to elongate, (3.6-5.7)x(3.6-7.2) ^m, and occur singly, in 64.22. Candida buinensis Soneda & S. Uchida pairs, clusters and chains. Pseudohyphae may be present. (1971) Growth in glucose-yeast extract-peptone broth: Af- Dalmau plate culture on corn meal agar: After ter 3 days at 25°C, the cells are spheroidal to ovoidal and 3 days at 25*^0, abundant pseudohyphae consist of ramified cylindroidal, (2.0^.0)x(3.5-6.0) |im, and occur singly, in chains of cells bearing groups of blastoconidia in verticils. Aerobic growth is white to cream-colored, shiny, smooth pairs, clusters and short chains. with some wrinkled areas and soft. The border is fringed. Dalmau plate culture on corn meal agar: After 5 days at 25°C, pseudohyphae consist of branched chains Fermentation: +/w Lactose of elongate cells with blastoconidia. Aerobic growth is Glucose w/Raffinose Galactose white, smooth, creamy, soft and entire. Trehalose Sucrose Maltose

Fermentation: Glucose Galactose Sucrose Maltose

+ + -/s

Lactose Raffinose Trehalose

+ + +/1 + + + + + -/I + -/I +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

n + 1 + -/I + + + + + n -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 3 0 T Cadaverine + Growth at 35°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 31.5, CBS 6796 {T^ : Meyer etal. 1984).

+ + + n + +

Origin of the strain studied: CBS 6796, tree fern, Buin. Type strain: CBS 6796.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/1 + + + + + + + + + -/I

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi-ee

+ + + + + + + v + v + +/1 + -

Additional assimilation tests and other growth characteristics:

L-Lysine + 2-Keto-D-gluconate Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ + Saccharate n 50% Glucose w/D-Glucuronate 10% NaCl/5% glucose + Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 3 7 T + Cadaverine + Growth at 4 0 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 34.4, 34.9, 2 strains {T^\ Nakase 1971b); 36.1, CBS 2226 {T^: von Arx 1979a).

Origin of the strains studied: CBS 2226, abscess at site of penicillin injection; CBS 6421, butter. Type strain: CBS 6421. Comments: Kurtzman and Robnett (1997) found C. aaseri and C. butyri to have identical sequences in

Vc. Descriptions of anamorphic ascomycetous genera and species

492

a 600-nucleotide region at the 5' end of large subunit (26S) rDNA^ indicating the two taxa to be conspecific. 64.24. Candida cantarellii (van der Walt & van Kerken) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Torulopsis cantarellii van der Walt & van Kerken (1961b) Torulopsis uinacea Ohara, Nonomura & Yamazaki (1964)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ellipsoidal, (3.0^.0)x(4.0-8.0) |im, single, in pairs and small groups.

Origin of the strains studied: CBS 4878, grape must in South Africa; CBS 5383, CBS 5445, CBS 5654, grape must in Japan. Type strain: CBS 4878. 64.25. Candida caseinolytica Phaff, Starmer, Lachance & Ganter (1994) This species was not included in our studies because of the time of its publication. Therefore, the description here is taken from the original description (Phaff et al. 1994). Growth in YM broth: After 3 days at 30°C, the cells are ovoidal to short cylindroidal, (1.3-2.5)x(2.5-5.0) jim, and occur singly, in pairs or in short chains.

Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is cream-colored, soft, dull and wrinkled.

Growth on YM agar: After 3 days, the streak culture is white, smooth, glossy, butyrous, convex and slow growing.

Fermentation:

Dalmau plate culture on corn meal agar: After 10 days, no pseudohyphae or true hyphae are produced.

Glucose Galactose Sucrose Maltose

+

-

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ -/I +

_ _ _ +

_ _ _ _ _ _ -/I

_ _

+/1

-

-/I

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1

_ + + + -/I

_

+ +

_ _ -/I -/I + -/I

_ -

+

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+ n n

-

+

-

+/w

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1%) Cycloheximide Growth at 30°C Growth at 3 5 T Growth at 3 7 T

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 41.9, CBS 4878 (BD: Meyer et al. 1984).

+

-

-/I +/w

-

+ + + +/1 + V

-

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + -/I -/I

-

1

-

V

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

V

1 +

Additional assimilation tests and other g rowt characteristics: 2-Keto-D-gluconate + Urease 5-Keto-D-gluconate + 0.1%) Cycloheximide Saccharate n Glucono-6-lactone n D-Glucuronate gluconate Amino acid-free medium n Xylitol Gelatin hydrolyzates n L-Arabinitol Casein hydrolysis Arbutin n at pH 6.5-7.0 Propane 1,2 diol n Lipolytic activity Butane 2,3 diol n YM with 5% NaCl Nitrite _ YM with 7.5% NaCl + Cadaverine Growth with triterpene Creatinine glycosides at 25°C L-Lysine + Growth with triterpene + Ethylamine glycosides at 37°C D-Glucosamine (N)^ _ Growth at 3 7 T 50% Glucose Growth at 4 2 T 10% NaCl/5% glucose n Growth at 45''C Starch formation ^ Utilization of D-glucosamine as a source of nitrogen.

+ +/w +

-

+ w +

-

+/w + + V V

64. Candida Berkhout / S.A. Meyer et al. Co-Q: Not determined. Mol% G + C: 46.4-47.4, 8 strains; 46.9, type strain (BD: Phaff et al. 1994).

Origin of the strains studied: Cacti {Opuntia spp. and Stenocereus spp.) in Arizona, Texas, Mexico, Hawaii, and Argentina (36 strains); Myrtillocactus cochal, Mexico (2); Drosophila mojavensis in Mexico (1). Type strain: CBS 7781 from Opuntia phaeacantha, Santa Rita Mountains, Arizona. Comments: This species was isolated from necrotic tissues of various cactus species in various locations. Its unique property is its exceptionally strong ability to hydrolyze casein at pH 6.5. In addition, the cells are very small. The type strain was described as having the ability to assimilate xylose, gluconate, glucono-6-lactone, sorbose (latently) and to grow at 42"^ and 45*'C.

64.26. Candida castellii (Capriotti) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis castellii Capriotti (196Id)

493

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Cadaverine Growth at 37''C Creatinine Growth at WC ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: N-6t determined. Mol% G + C: 43.3, CBS 4332 {T^ : Meyer et al. 1984).

+ 1 1 + +

i ff - f £^^

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to cylindrical, (2.0-3.0)X(3.0-7.0) |im, single and in pairs (Fig. 220). Dalmau plate culture on corn meal agar: After 14 days at 25°C, no pseudohyphae are present. Aerobic growth is white to cream-colored, soft, smooth, glistening and entire. Fermentation: Glucose Galactose Sucrose Maltose

Origin of the strain studied: CBS 4332, soil, Finland. Type strain: CBS 4332.

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Fig. 220. C castellii, CBS 4232. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 |im.

-/I + + -

Comments: Candida castellii closely resembles C. glabrata but can be distinguished from it by requiring inositol but not pyridoxine as a vitamin for growth. 64.27. Candida castrensis C. Ramirez & A. Gonzalez (1984a) Growth in glucose-yeast extract-peptone broth: After 3 days at 20°C, the cells are elongate, (1.52.5)x(6.0-15.0)|im, single and in pairs (Fig. 221). Dalmau plate culture on corn meal agar: After 7 days at 22°C, pseudohyphae consist of branched chains of elongate cells with pyriform blastoconidia; septate hyphae are also present. Aerobic growth is white, dull, and smooth with a mycelial border. Fermentation: absent.

494

Vc. Descriptions of anamorphic ascomycetous genera and species

large subunit (26S) rDNA, indicating the two taxa to be conspecific.

SKI

64.28. Candida catenulata Diddens & Lodder (1942) Synonyms: Blastodendrion brumptii Guerra (1935) Candida brumptii (Guerra) Langeron & Guerra (1938) Mycotorula brumptii (Guerra) Krasil'nikov (1954c) Candida rauautii Langeron & Guerra (1938)

Fig. 221. C. castrensis, CBS 8172. After 3 days in glucose-yeast extractpeptone broth at 20''C. Bar = 5 [im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 1 + + + 1 + + 1 -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-fi-ee

+ + -

n n 1 v + +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1%) Cycloheximide Growth at 2 5 T Growth at 30°C

Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of chains of ovoidal or cylindroidal cells, and sometimes bear small verticils of ovoidal blastoconidia. Aerobic growth is grayish to creamcolored, somewhat dull, soft and wrinkled. Fermentation:

+ 1 1 + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to cylindroidal, (1.5^.5)x(4-12)^m, single, in pairs and chains (Fig. 222).

+ -

+ + 1 w

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/1

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + +/1 + +/1 -/I + + + -

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 41.7, CBS 8172 {T^ : Meyer, unpublished data).

Origin of the strain studied: CBS 8172, from rotten wood, Chile. Type strain: CBS 8172. Comments: The strain examined grows poorly at 25°C, consequently the assimilation test cultures were incubated at 20^C. Kurtzman and Robnett (1997) found C paludigena and C castrensis to differ by only two nucleotides in a 600-nucleotide region at the 5' end of

Fig. 222. C catenulata, CBS 6174. After 7 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 ^im.

495

64. Candida Berkhout / S.A. Meyer et al.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

v n n V v +/1 + +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 2>TC Growth at 4 0 T

+/1 n

-/I + + +/1

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 54.5, CBS 565; 54.1, CBS 564 (T;^: Stenderup and Bak 1968); 53.2, C-140 (Langeron #495); 53.2, CBS 1904; 53.4, UCD-FS&T 60-60 ( r ^ : Meyer and Phaflf 1972); 53.2, 54.4, IFO 0745 (CBS 565); 54.4, IFO 0744 (CBS 1904) {T^: Nakase and Komagata 197If).

Origin of the strains studied: CBS 564, case of perleche (C brumptii); CBS 565, from dysentery patient; CBS 1904, hyperkeratinic foot (C muautii); CBS 2014, chicken's gut; CBS 2743; CBS 6145, skin; CBS 6174, mastitis milk; CBS 6824; CBS 7135, CBS 7230, soil. Type strain: CBS 565. Comments: The conspecificity of C. catenulata, C. brumptii and C ravautii was established by DNA reassociation experiments (Simione and Meyer 1978).

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + + + + -/I

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1 + + + + + + + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

n n + + + + + +

Ethylamine D-Glucosamine (N)* 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.1% Cycloheximide Growth at 25''C Growth at 3 0 ^ Growth at SS^'C

+ -

+ + + w/-

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 44.0, CBS 5719 (BD: Meyer et al. 1984); 42.7, CBS 5719 {T^\ Stenderup et al. 1972).

64.29. Candida chilensis Grinbergs & Yarrow (1970a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are short ovoidal to elongate, (3.6-5.8)x(4.3-7.2) jim, single, in pairs and small groups. After one month a creeping pellicle is present and the cell suspension is mucoid. Dalmau plate culture on corn meal agar: After 7 days at 25°C, branched chains of cylindrical cells give a wavy appearance. A few to many subglobose to ovoidal blastoconidia appear individually or in clusters. Some septate hyphae are evident. Aerobic growth is creamcolored to beige, shiny, smooth and butyrous. The margin is entire to slightly fringed. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Origin of the strains studied: CBS 5719, CBS 5720, from rotten wood, Chile. Type strain: CBS 5719. 64.30. Candida chiropterorum Grose & Marinkelle (1968) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoid, (2.2-2.8) X (4.4-7.0) |im, and occur in branched chains and small branched clusters. Few single cells or budding cells are present. After one month a thick sediment is evident. Dalmau plate culture on corn meal agar: After 7 days at 25°C, branched septate hyphae with small chains or clusters of blastoconidia are present. Aerobic growth is white to cream-colored and dry in appearance. Filamentous outgrowths give a feathery, 'fuzzy' appearance and the margin is fringed. Fermentation: absent.

496

Vc. Descriptions ofanamorphic ascomycetous genera and species

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Assimilation: TV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics:

Ethylamine 2-Keto-D-gluconate + D-Glucosamine (N)^ 5-Keto-D-gluconate n 50% Glucose Saccharate 10% NaCl/5% glucose D-Glucuronate + Starch formation Xylitol Urease L-Arabinitol Biotin-free Arbutin + Pyridoxine-free Propane 1,2 diol 0.01% Cycloheximide Butane 2,3 diol 0.1%) Cycloheximide Nitrite Growth at 2>TC Cadaverine + Growth at 40°C Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. MoI% G + C: 48.0, CBS 6064 (7;^ : Meyer et al. 1984).

Origin of the strain studied: CBS 6064, liver of bat (Mormoops megalophylld). Type strain: CBS 6064. 64.31. Candida coipomoensis C. Ramirez & A. Gonzalez (1984f) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (3.0-4.0)X(3.0-4.5) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25°C, well-developed pseudohyphae are present. Aerobic growth is white, smooth, and butyrous with a fringed border.

+ + + + + + + 1

-

-/I

-

+

-

1 +

-

1

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + + +

-

+ + + +

-

+ +

-

n

-

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin + Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.1% Cycloheximide Growth at 30*'C Cadaverine + Growth at 35°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 32.0, CBS 8178 {T^ : Meyer, unpublished data).

+ + -

1 + + +

Origin of the strain studied: CBS 8178, rotten wood, Chile. Type strain: CBS 8178. 64.32. Candida conglobata (Redaelli) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) Synonyms: Cryptococcus conglobatus (Redaelli) Pollacci & Nannizzi (Nannizzi 1934) Torulopsis conglobata Redaelli (1925) Candida conglobata (Redaelli) van Uden & H.R. Buckley (1970) nom. inval.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to cylindrical, (3.0-5.0)X(5.0-20.0) [im, single and in chains. Dalmau plate culture on corn meal agar: Pseudohyphae consist of long, branched chains of cylindrical cells, usually with few blastoconidia. Aerobic growth is cream-colored and delicately wrinkled. Fermentation:

Fermentation: Glucose Galactose Sucrose Maltose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

+ s -

Lactose Raffinose Trehalose

s

64. Candida Berkhout / S.A. Meyer et al.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+ +

-

+ + +/1 +/1

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

-

+ +

-

+ +

-

+

-

1

V Additional assimilation tests and other growth characteristics: + 2-Keto-D-gluconate L-Lysine + 5-Keto-D-gluconate Ethylamine Saccharate n D-Glucosamine (N)^ D-Glucuronate + 50% Glucose -

n Xylitol 10% NaCl/5% glucose + Starch formation L-Arabinitol + Arbutin Urease + Biotin-free Propane 1,2 diol + Butane 2,3 diol + Pyridoxine-free Nitrite 0.01% Cycloheximide Growth at 35"C V Cadaverine + Creatinine Growth at 37°C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.2^0.9^, CBS 2018, CBS 5808 {T^\ Meyer et al. 1984).

Origin of the strains studied: CBS 2018, tubercular lung; CBS 2019, probably human origin; CBS 5808, bark of tree, Chile. Type strain: CBS 2018. 64.33. Candida cylindracea K. Yamada & Machida ex S.A. Meyer & Yarrow (1998) Synonym: Candida cylindracea K. Yamada & Machida (1962) nom. inval.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are elongate, (2.0-5.0)x(4.012.0) ^m, in pairs and chains. Growth is predominantly pseudomycelial with very few single cells present. A thick wrinkled pellicle is present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of elongate cells with little branching and few blastoconidia. A wavy appearance is evident. Aerobic growth is white, smooth and lacy, craterlike and heavily fringed with mycelium. Fermentation: Glucose Galactose Sucrose Maltose

s -

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

497

+ + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

+ + + + w + + Additional assimilation tests and other g ro^ characteristics: 2-Keto-D-gluconate + L-Lysine -

5-Keto-D-gluconate n Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol + Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide Cadaverine + Growth at 3 0 T Creatinine Growth at 35''C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 62.7, CBS 6330 {T^ : Meyer and Yarrow 1998).

+

-

+ + +

-

Origin of the strain studied: CBS 6330, soil. Type strain: CBS 6330. Comments: This species, which was previously placed in synonymy with Candida zeylanoides, has been restored because of the significant difference of mol% G + C. In addition, the rRNA sequence comparison of these two species supports this separation (Kurtzman, personal communication). 64.34. Candida dendrica (van der Walt, van der Klift & D.B. Scott) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis dendrica van der Walt, van der Klift & D.B. Scott (van der Walt et al. 1971b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are subglobose to shortovoidal, some cylindrical, (2.0-5.5)x(3.0-6.5) jim, and occur singly, in pairs, short chains and clusters. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is smooth, shiny, cream-colored with an entire to somewhat irregular margin.

Vc. Descriptions of anamorphic ascomycetous genera and species

498

Fermentation: Glucose Galactose Sucrose Maltose

Fermentation: s -

Lactose Raffinose Trehalose

+ + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s -/s -/s

+ + + + + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol Butane 2,3 diol Pyridoxine-free 0.1% Cycloheximide Nitrite Growth at 3 0 ^ Cadaverine Growth at SS^C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 42.0, CBS 6151 (r^, : Stenderup et al. 1972).

+ + n + + +

Origin of the strains studied: CBS 6151, 6227, frass of beetle larvae, South Africa. Type strain: CBS 6151. 64.35. Candida dendronema van der Walt, van der Klift & D.B. Scott (van der Walt et al. 1971a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25*'C, the cells are various shapes: globose, ovoid, elongate, teardrop, and triangular to cylindrical, (2.2-5.l)x(3.6-5.7) |im, and occur singly, in pairs and in small clusters and short chains. Pseudohyphae are present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, well-developed pseudohyphae are present. The blastoconidia are curved, globose, triangular or teardrop shaped and arranged in grape-like clusters. Aerobic growth is off-white, dry, raised, wrinkled and with a fringed border.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + 1 + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1 + + + + + + + + + + + + 1 -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 3 5 T Cadaverine + w/Growth at 37''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 38.9, CBS 6270 {T^: Meyer et al. 1984); 38.5, CBS 6270; 38.0, CBS 6271 (HPLC: C.-F. Lee et al. 1993).

Origin of the strains studied: CBS 6270, CBS 6271, frass of beetle larvae. South Africa. Type strain: CBS 6270. 64.36. Candida diddensiae (Phaff, Mrali & Williams) Fell & S.A. Meyer ex S.A. Meyer & Ahearn (1983) Synonyms: Trichosporon diddensiae Phaff, Mrak & Williams (1952) Torulopsis saccharini Santa Maria (1959b) Candida diddensiae (Phaff, Mrak & Williams) Fell & S.A. Meyer (1967) nom. inval.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose, pear-shaped to cylindroidal, (2.3-4.6)x(2.5-5.7)|im, and occur singly, in pairs, short chains and clusters. After one month a thin filmy pellicle and sediment are present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindroidal cells with verticils of ovoidal blastoconidia

64. Candida Berkhout / S.A. Meyer et al. giving a wavy appearance. Aerobic growth is off-white to cream-colored, lacy to wrinkled with a mycelial border. Fermentation: Glucose Galactose Sucrose Maltose Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + -/s -/s

Lactose Raffinose Trehalose

+ + -/I + + + + -

A/^-Acetyl-D-glucosamine n Methanol Ethanol + Glycerol + Erythritol + Ribitol + Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside 1 Salicin +/1 D-Gluconate + DL-Lactate Succinate + Citrate + Inositol Hexadecane n Nitrate Vitamin-free -

+ + + +/1 +/1 -/I

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate +/s 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol Nitrite 0.01% Cycloheximide Cadaverine + Growth at 37"C 2>TC + Creatinine Growth at 40°C v ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 38.8; 38.3; 36.1, CBS 2214 {T^\ Meyer and Phafif 1972; T^: Daniel 1983; HPLC: C.-F. Lee et al. 1993, respectively); 37.3, AJ 5108 {T. saccharini) {T^: Nakase and Komagata 1971e). Origin of the strains studied: USA; CBS 4514, sugar, Spain. Type strain: CBS 2214.

CBS 2214, shrimp,

Comments: DNA reassociation studies (Meyer and Simione 1978) demonstrated a high degree of relatedness between the type strain of Torulopsis saccharini and C diddensiae. Other species (C. atmosphaerica, C. polymorpha and Trichosporon atlanticum) that had been considered synonyms of C. diddensiae (van Uden and Buckley 1970) were found to have low DNA relatedness and were restored to the species level (Meyer et al. 1984). C.-F. Lee et al. (1993) showed low DNA relatedness between C diddensiae and C. dendronema, and C. diddensiae and C terebra. Kurtzman and Robnett (1997) found C diddensiae and C naeodendra to have identical sequences in a 600-nucleotide region at the

499

5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. 64.37. Candida diversa Y. Ohara, Nonomura & Yunome ex van Uden & H.R. Buckley (1970) Synonyms: CandidafimetariaSoneda var. diversa Ohara, Nonomura & Yunome (1960b) Torulopsis arnaudii Capriotti & Fatichenti (1969) Grov^^th in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoid to short cylindrical, (1.5-4.5)x(5.0-8.0)|im, and occur singly and in short chains. Dalmau plate culture on corn meal agar: After 7 days at 25°C, primitive pseudohyphae consisting of branched chains of cylindrical cells with clusters of blastoconidia may be present. Aerobic growth is white, smooth, and creamy with an entire border. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

—

-

+ -/I

V

-

+ +

-

+ +

-

Additional assimilatio ests and other g;rov^ characteristics: + L-Lysine 2-Keto-D-gluconate Ethylamine + 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate n 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01%) Cycloheximide Nitrite Growth at 35T + Cadaverine + Growth at 37T w/Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Yamada and Kondo 1972a). Mol% G + C: 34.4, AJ 4648; 34.9, AJ 5367 {T^: Nakase and Komagata 1971f); 36.0, CBS 6102; 36.5, CBS 6103; 35.1, 36.6, CBS 4074 (7;,: Suzuki et al. 1994; BD: Meyer et al. 1984).

Vc. Descriptions of anamorphic ascomycetous genera and species

500

Origin of the strains studied: CBS 4074, grape must, Japan; CBS 6102, CBS 6103, grape must, Italy. Type strain: CBS 4074. Comments: Suzuki et al. (1994) described a new species, C stellimalicola, that has physiological and morphological properties similar to C. diversa, C. karawaiewii and C silvae. It is differentiated from C diuersa on its ability to assimilate D-arabinose and DL-lactic acid, its inability to assimilate ribitol and the lack of fermentation. It differs from C karawaiewii by its ability to assimilate L-lysine and from C silvae on a vitamin requirement. DNA reassociation, cell surface antigens and proton magnetic resonance spectra of cell wall mannans were Fig. 223. C drimydis, CBS 8185. After 3 days in glucose-yeast employed to differentiate these species. peptone broth at 25°C. Bar = 5 |im. 64.38. Candida drimydis C. Ramirez & A. Gonzalez (1984J) Growth in glucose-yeast extract-peptone broth: After 3 days at 25^C, the cells are ovoidal, (2.5-6.0) x (2.86.9) [im, single and in pairs. A sediment is present (Fig. 223). After 30 days a ring is present. Dalmau plate culture on corn meal agar: After 14 days at 25''C, no pseudohyphae are present. Aerobic growth is white, smooth, and waxy with an undulating margin. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 + + 1 1 1 -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ 1 1 1 1 1 1 + 1 -

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n + D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 1 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin 1 Biotin-free Propane 1,2 diol 1 Pyridoxine-free Butane 2,3 diol + 0.1% Cycloheximide Nitrite U.r/o + Growth at 25''C 25T Cadaverine + + Growth at SOT Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 43.4, CBS 8185 {T^: Tengku Zainal Mulok 1988).

extract-

Origin of the strain studied: CBS 8185, rotten wood (Drimys winteri), Chile. Type strain: CBS 8185. Comments: Kurtzman and Robnett (1997) found C. petrohuensis, C. ancudensis and C. drimydis to have identical sequences in a 600-nucleotide region at the 5^ end of large subunit (26S) rDNA, thus indicating the three taxa to be conspecific. 64.39. Candida edax van der Walt & E.E. Nel (1968) See Stephanoascus smithiae: p. 402 Comments: Gimenez-Jurado et al. (1994) demonstrated C. edax to be the anamorph of Stephanoascus smithiae from mating reactions and high nuclear DNA complementarity. 64.40. Candida entomophila D.B. Scott, van der Walt & van der Klift (van der Walt et al. 1971a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are spheroidal, ovoidal, long ovoidal, cylindrical, teardrop to somewhat triangular and occur singly, with buds, and in chains. The cell size differs in the two strains which measure (2.8^.2) x (7.0-8.4) jim and (5.6-7.0)x(14.0-21.0)^m (Fig. 224). Spheroidal to ellipsoidal asexual endospores are formed in hyphal strands. Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae are abundant and consist of long straight chains of cylindrical cells with little branching and often without blastoconidia. When blastoconidia are present, they are ovoidal to triangular and occur singly, in small clusters and short chains. Septate hyphae are also present. Aerobic growth is white to cream-colored, semishiny to dull, and smooth with wrinkled areas. The margin is fringed. Fermentation: Glucose Galactose Sucrose Maltose

+ s + -

Lactose Raffinose Trehalose

s +

501

64. Candida Berkhout / S.A. Meyer et al.

Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae are abundant and consist of chains of cylindroidal cells, often long and slender, with oval blastoconidia. Septate hyphae m a y also b e present. Aerobic growth is white to cream-colored, somewhat shiny, and folded with a fringed margin.

Fig. 224. C. entomophila, CBS 6160. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 |Lim. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/1 + +/1

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate v L-Lysine + 5-Keto-D-gluconate n Ethylamine + Saccharate D-Glucosamine (N)* + D-Glucuronate 50% Glucose v Xylitol + 10% NaCl/5% glucose + L-Arabinitol + Starch formation Arbutin + Urease Propane 1,2 diol + Biotin-free Butane 2,3 diol + Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at 37*'C + Creatinine Growth at 40°C w/^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 56.3, CBS 6160 {T^: Meyer et al. 1984). O r i g i n o f t h e s t r a i n s s t u d i e d : C B S 6159, C B S 6160, tunnels of beetles in trees, South Africa. Type strain: CBS 6160. 64.41. Candida ergastensis Santa Maria (1971) Growth

in

glucose-yeast extract-peptone

broth:

After 3 days at 25°C, the cells are ovoidal to elongate and cylindroidal, ( 2 . 0 - 4 . 0 ) x ( 4 . 5 - 1 5 . 0 ) | i m , single and in chains.

Fermentation: Glucose Galactose Sucrose Maltose

+ 1 -

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + 1 1 -/I 1

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + + + + -

Additional assi atior i tests and other g;ro^ characteristics: — L-Lysine + 2-Keto-D-gluconate n + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate + 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol + Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.1% Cycloheximide + Nitrite Cadaverine + Growth at 30°C Growth at 35°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 36.5, CBS 6248 (BD: Meyer et al. 1984). Origin of the strain studied: CBS 6248, bark beetles (Ergastes faber), Spain. Type strain: CBS 6248. 64.42. Candida ernobii (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis ernobii Lodder & Kreger-van Rij (1952) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, t h e cells are subglobose, ( 3 . 0 5.0)X(3.0-6.0) jim, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent or consist

Vc. Descriptions of anamorphic ascomycetous genera and species

502

of short chains of cells. Aerobic growth is off-white to cream-colored, soft, smooth or slightly wrinkled. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

+ + + + 1 -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.0-4.0)X(3.0-5.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is off-white to cream-colored, shiny or somewhat dull, and smooth with a entire margin. Fermentation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + 1 1 1 + -

+/1 +

Additional assimilation tests and other growth characteristics: 2 -Keto-D-gluconate 5 -Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

n n + + + -/I -/I + + +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 2 5 T Growth at SO'^C Growth at 3 5 T

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 8 (Yamada and Kondo 1972a). Mol% G + C: 36.1, CBS 1737 {T^: Nakase and Komagata 1971e).

Origin of strain studied: {Ernobius mollis). Type strain: CBS 1737.

CBS 1737, bark beetles

Comments: Kurtzman and Robnett (unpublished data) found C. ernobii and C karawaiewii to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. Furthermore, the sequence of Pichia holstii differed by only two nucleotides suggesting that it is either the teleomorph or a sibling species. 64.43. Candida etchellsii (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Brettanomyces sphaericus Etchells & T.A. Bell (1950b) Torulopsis citrus Recca & Mrak (1952)

Torulopsis etchellsii Lodder & Kreger-van Rij (1952) Torulopsis halonitratophila Onishi ex van Uden & Vidal-Leiria (1970) Candida halonitratophila (Onishi ex van Uden & Vidal-Leiria) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Torulopsis nodaensis Onishi (1957) nom. nud. Candida nodaensis Yarrow & S.A. Meyer (1978)

Glucose Galactose Sucrose Maltose

V v

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine 5-Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine Growth at 3 5 T Creatinine Growth at 3 7 T ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). MoI% G + C: 52.0-52.7, 4 strains {T^: Nakase and Komagata 1971d); 52.4, CBS 6268 {T^: Meyer et al. 1984); 53.0, CBS 3094 {T^: Yarrow and Meyer 1978); 52.0, CBS 1750; 52.4, JCM 5956; 51.4, CBS 5240; 52.0, CBS 3094 {T^: Suzuki et al. 1992).

Origin of the strains studied: CBS 1750, CBS 1751, fermenting cucumber brine, USA; CBS 2853, sputum, Netherlands; CBS 2854, unknown, probably of human origin; CBS 2987, concentrated lemon juice (type strain

64. Candida Berkhout / S.A. Meyer et al.

503

of Torulopsis citrus); CBS 3094, soy mash, Japan (type Additional assimilation tests and other growth strain of C nodaensis); CBS 4852, sputum; CBS 5008, characteristics: L-Lysine + sugar, Mauritius; CBS 5240, soy mash, Japan (type strain 2-Keto-D-gluconate Ethylamine + of C halonitmtophila); CBS 6268, soy mash, Japan; CBS 5-Keto-D-gluconate D-Glucosamine (N)^ + Saccharate n 8147, sausages, Netherlands. 50% Glucose + D-Glucuronate Type strain: CBS 1750. 10% NaCl/5% glucose n Xylitol Starch formation

-

Comments: Suzuki et al. (1992) did taxonomic L-Arabinitol Urease Arbutin studies of halophilic and halotolerant Candida species Propane 1,2 diol Biotin-free + Pyridoxine-free + found in the ripening process of soy sauce mash. Butane 2,3 diol 0.01% Cycloheximide They employed several criteria: proton magnetic reso- Nitrite Growth at 37''C + + nance spectra of cell wall galactomannans, DNA base Cadaverine Growth at 40°C + Creatinine composition, electrophoretic patterns of enzymes and ^ Utilization of D-glucosamine as a source of nitrogen. DNA-DNA hybridization. The results demonstrated that Co-Q: Not determined. C halonitmtophila and C nodaensis are conspecific with MoI% G + C: 29.3, CBS 6753 {T^ : Meyer, unpublished data). C. etchellsil F.-L. Lee et al. (1992) employed DNA Origin of the strains studied: CBS 6753 (ATCC reassociations on these same species and reported their 14927) source unknown; CBS 8041, CBS 8084 (type conspecificity. of Torulopsis ethanolitolerans); CBS 8085 (type of Torulopsis ethanolitolerans var. minor), industrial fodder 64.44. Candida ethanolica Rybaf ova, Stros & yeasts from Czechoslovakia. Kockova-Kratochvilova (1980) Type strain: CBS 8041. Synonyms: Torulopsis ethanolitolerans Rybafova, Stros & Kockova-Kratochvilova (1981) Torulopsis ethanolitolerans Rybafova, Stros & Kockova-Kratochvilova var. minor Rybafova, Stros & Kockova-Kratochvilova (1981)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (5.0-7.0)x(6.010.0) |im, single and in pairs. After one month, a thin pellicle is present and growth is evident on the glass surface. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongate cells. Aerobic growth is white to creamcolored, smooth to delicately wrinkled, lobed and entire. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s/-

+

-

Lactose Raffinose Trehalose

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ -/I

-

+/1 +

-

n

-

+

Comments: Kurtzman and Robnett (unpublished data) found C ethanolica and Pichia deserticola to differ by only two nucleotides in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be either conspecific or sibling species. 64.45. Candida famata (Harrison) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) This species has two varieties: Candida famata (Harrison) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) yar. famata (1985) See Debaryomyces hansenii var. hansenii: p. 161 Candida famata var. flareri (Ciferri & Redaelli) Nakase & Suzuki (1985b) See Debaryomyces hansenii YSLT. fabryi: p. 162. Comments: Nakase and Suzuki (1985a,b) made a thorough investigation of Debaryomyces hansenii. Various strains of Candida species that at one time had been recognized as anamorphs of D. hansenii were included. DNA base composition, DNA reassociation, PMR spectra, isoenzymes, and serology were employed in these studies. 64.46. Candida fennica (Sonck & Yarrow) S.A. Meyer & Ahearn (1983) Synonyms: Trichosporon fennicum Sonck & Yarrow (1969) Trichosporon melibiosaceum D.B. Scott & van der Walt (1970b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, cells are globose or ovoidal to elongate, (2.2-6.5) x (2.9-6.5) ^m. Pseudohyphae and true hyphae are also present. After one month the sediment is clumpy and the broth appears viscous. Dalmau plate culture on corn meal agar: After 7 days

504

Vc. Descriptions of anamorphic ascomycetous genera and species

at 25°C, pseudohyphae and true hyphae are present. Long wavy, branched chains of cells with globose to ovoidal blastoconidia are abundant as well as true hyphae which have knobby protuberances along the hyphal strands. Aerobic growth is white to off-white, folded, wrinkled, dull, dry to powdery, with a mycelial border. Fermentation: Glucose Galactose Sucrose Maltose

+ s s +

Lactose Raffinose Trehalose

+ + v + + + + -/I v v v + +/1 v + -/I

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s/s/+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + +/1 +/1

Fig. 225. C. fermenticarens, CBS 7040. After 3 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 jim.

ovoidal, (2.5-4.0)X(3.0-5.0) jim, and are single or in pairs (Fig. 225). Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongated cells, sometimes with verticils of ovoidal blastoconidia. Aerobic growth is white to cream-colored, smooth and entire. Fermentation: absent. Assimilation:

+/1

Additional assimilation tests and other growth characteristics: L-Lysine + 2-Keto-D-gluconate + Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose + D-Glucuronate 10% NaCl/5% glucose + Xylitol +/1 Starch formation L-Arabinitol v Urease Arbutin + Biotin-free s Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol v 0.01% Cycloheximide Nitrite Growth at 3 5 T w/Cadaverine + Growth at ST^'C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 34.7, CBS 5928; 37.9, CBS 5999 {T^: Gueho et al. 1984).

Origin of the strains studied: CBS 5928, cat's anus, Finland; CBS 5999, insect frass from tree. South Africa; CBS 6027, CBS 6028, poultry or birch trees, Finland; CBS 6087, frass from tree, South Africa (type of Trichosporon melibiosaceum). Type strain: CBS 5928. Comments: This species closely resembles Pichia burtonii, but no mating has been observed. 64.47. Candida fermenticarens van der Walt & P.B. Baker (1978) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + 1 + + + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol 1 Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at WC Cadaverine + Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: Not determined.

64. Candida Berkhout / S.A. Meyer et al.

Origin of the strain studied: South Africa. Type strain: CBS 7040.

CBS 7040, lichen,

64.48. CandidafloricolaToliuoka, Ishitani, S. Goto & Komagata (1987) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.0-3.0)X(3.0^.5) |im, single and in pairs (Fig. 226). Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae are not present. Aerobic growth is white, smooth, butryous and entire.

505

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine + -

5-Keto-D-gluconate n Ethylamine + n Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose + -/I Xylitol 10% NaCl/5% glucose + Starch formation L-Arabinitol Arbutin Urease Propane 1,2 diol Biotin-free + + Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine + Growth at 35T + Growth at 37T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Tokuoka et al. 1987). Mol% G + C: 51.7, CBS 7289 {T^\ Tokuoka et al. 1987); 51.7, CBS 7289 {T^\ Meyer, unpublished data).

Origin of the strains studied: CBS 7289, CBS 7290, dandeUon {Taraxacum platycarpum), Japan. Type strain: CBS 7289.

64.49. CandidafluviatilisHedrick (1976) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (1.5-4.0)x(3.0-5.0)jim, single and in pairs. Fig. 226. C.floricola,CBS 7289. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 [im.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/1

+ + + + +

-

+

-

-/I

-

1

-

Lactose Raffinose Trehalose

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are absent or primitive, consisting of short branched chains of ovoidal cells. Aerobic growth is white to cream-colored, smooth, glossy to dull and entire. Fermentation:

+

-

+/1 +

-

+ +

-

-/I

-

+

-

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s

Lactose Raffinose Trehalose

s

-/I

+ +

-

+ + + + +

-

+

-

+ +

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+

-

+ + + + +/1 +/1 + +

-

+/1

-

Vc. Descriptions of anamorphic ascomycetous genera and species

506

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol 1 Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol + Pyridoxine-free Butane 2,3 diol + 0.1%) Cycloheximide Nitrite Growth at 37T Cadaverine + Growth at 40T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.8, CBS 6776 ; 40.0, CBS 6775 {T^: unpublished data).

+ + -

+ + +

Meyer,

Origin of the strains studied: CBS 6775, CBS 6776, polluted river, Indiana, USA. Type strain: CBS 6776. 64.50. Candida freyschussii H.R. Buckley & van Uden (1968) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (3.0-5.0)x(5.013.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of somewhat elongated cells, sometimes with ovoidal blastoconidia. Aerobic growth is whitish to cream-colored, soft, smooth and glistening. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

s/-

-

+

-

+ + + 1

-

+

-

+

-

+

-

Lactose Raffinose Trehalose

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine 5-Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Growth at 37T Cadaverine Growth at 40°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 45.3, type strain (BD: Meyer et al. 1984); 43.8, 2 strains (BD: Holzschu et al. 1979).

Origin of the strains studied: CBS 2161, CBS 2162, wood pulp, Sweden. Type strain: CBS 2162. Comments: The type strain produces hat-shaped ascospores on 5% Difco malt agar. Kurtzman (personal communication) also observed very small ascospores in the type strain. However, the ascospores were not viable. More studies need to be performed before decisions can be made about the teleomorphic stage of this organism. 64.51. Candida friedrichii van Uden & Windisch (1968) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are ovoidal to cylindroidal, (1.5-2.5)x(5.0-12.0)|im, single and in short chains (Fig. 227). A thin pellicle is present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of chains of cylindroidal cells, sometimes bearing short chains of ovoidal blastoconidia. Some pseudohyphae bear many blastoconidia whereas others have few. Aerobic growth is white to cream-colored, soft, wrinkled with a frosted appearance and with a fringed border.

+ +

-

+ + + + + + + +

-

Fig. 227. C. friedrichii, CBS 6937. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 |i,m.

507

64. Candida Berkhout / S.A. Meyer et al.

Assimilation:

Fermentation:

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-/I

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

Origin of the strains studied: CBS 4114, D-glucitol solution, Germany; CBS 6937, cheese, France. Type strain: CBS 4114. 64.52. Candida fructus (Nakase) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis fructus Nakase (1971a)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (3.4-5.6)X(3.4-6.7) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25''C, primitive pseudohyphae of short chains of ovoidal cells are sparsely formed. Aerobic growth is off-white, shiny, smooth and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1 + + + 1 + 1 + + -

Additional assimilation tests and other growth characteristics:

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 3 5 ^ Cadaverine + Growth at 2>TC Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 32.9-33.7, 2 strains {T^\ Meyer etal. 1984).

+ + + + 1 +

s

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol + Pyridoxine-free Butane 2,3 diol 0.01%) Cycloheximide Nitrite Growth at 3 0 T Cadaverine + Growth at 35*'C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 48.8, CBS 6380 {T^ : Nakase 1971b).

Origin of the strain studied: Japan. Type strain: CBS 6380.

CBS 6380, banana,

Comments: Kurtzman and Robnett (1997) found C. fructus and C. musae to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. 64.53. Candida galacta (Golubev & Bab'eva) F.-L. Lee, C.-F. Lee, 0]<:ada, Komagata & Kozak (1993) Synonym; Torulopsis apis var. galacta Golubev & Bab'eva (1977)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are spheroidal, (1.53.5) jim, and occur singly, in pairs, in small chains and in clusters. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is white to light beige in color, smooth, creamy, soft, and entire. Fermentation: absent.

Vc. Descriptions of anamorphic ascomycetous genera and species

508

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Fermentation: + 1

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Glucose Galactose Sucrose Maltose

-

Assimilation:

n

1

+ +

-

+

-

+ 1

-

n

-

Additional assimilation tests and other growth characteristics + 2-Keto-D-gluconate L-Lysine 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine

n

_ _ _ _ _ +

_

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide Growth at 35°C Growth at 37''C

+ + + +

_ _ +

_ _ +

_

^ Utilization of D-gliucosamine as a source of nitrogen. Co-Q: 8 (F.-L. Lee et al. 1993y M o l % G + C:50.2, CBS 6939 (HPLC: F.-L. Lee et al. 1993); 49.8, CBS 6939 (T;^: Meyer, unpublished data).

Origin of the strain studied: CBS 6939, from cocoons of ants. Type strain: CBS 6939. Comments: F.-L. Lee et al. (1993) established this yeast as a distinct species. Formerly, it was classified as C. apis var. galacta. C. galacta and C. apis were found to differ in mol%G + C and Co-Q, and also demonstrated a low degree of DNA reassociation. 64.54. Candida geochares (van der Walt, E. Johannsen & Yarrow) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis geochares van der Walt, E. Johannsen & Yarrow (1978)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, (3.0-5.0) ^im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is white, butyrous, smooth and entire.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s

s

Lactose Raffinose Trehalose

+ 1 + +

_ 1

_ _ _ _ _ -

1

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

_ _ _ +

_ 1

_ + +

_ + + 1 +

-

Additional assimilation tests and other g ro^ characteristics: 2-Keto-D-gluconate 1 L-Lysine 5 -Keto-D-gluconate Ethylamine Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 1 10% NaCl/5% glucose L-Arabinitol Starch formation _ Arbutin + Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free _ 0.01% Cycloheximide Nitrite Growth at 3 5 T + Cadaverine Growth at 37''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 54.1, CBS 6870 (7;^,: van der Walt et al. 1978).

+ + + + +

_ +

+ w

Origin of the strain studied: CBS 6870, soil. South Africa. Type strain: CBS 6870. 64.55. Candida glabrata (Anderson) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Cryptococcus glabratus Anderson (1917) Torulopsis glabrata (Anderson) Lodder & de Vries (1938)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25'^C, the cells are subglobose to ovoidal, (2.5-4.0)X(3.0-6.0) fxm, single and in pairs (Fig. 228). Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent or consist of a few short chains of ovoidal cells. Aerobic growth is white, smooth, butyrous and entire.

64. Candida Berkhout / S.A. Meyer et al.

509

with pH of 2; CBS 2661, calf fetus; CBS 4331, fermenting passion-fruit juice; CBS 5278, (IGC 2990) unknown; CBS 6144, vagina; CBS 7307, sputum. New Zealand. Type strain: CBS 138. Comments: For the purposes of routine identification, C glabmta can be distinguished from C castellii by its vitamin requirements. C glabrata requires pyridoxine for growth, but not inositol. 64.56. Candida glaebosa Komagata & Naliase (1965) Fig. 228. C. glabmta, CBS 7307. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 |im.

Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Dalmau plate culture on corn meal agar: After 4 days at 25°C, pseudohyphae consist of dense chains of elongated cells. Aerobic growth is white, smooth, butyrous and entire.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Growth in glucose-yeast extract-peptone broth: After 3 days at 25*'C, the cells are ovoidal, (2.0-3.0)x(3.06.0) [im, single, in pairs and dense clusters (Fig. 229).

v +/1 + v -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine w/5 -Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose v Xylitol 10% NaCl/5% glucose + L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free v Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine Growth at 7>TC + Creatinine Growth at 40°C + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 6 (Yamada and Kondo 1972a). Mol% G + C: 39.6^0.2, 5 strains (Mendonga-Hagler and Phaff 1975); 38.5-39.5, 2 strains {T^: Nakase and Komagata 1971d).

Origin of the strains studied: CBS 138, feces; CBS 858, CBS 859, unknown, probably human; CBS 861, CBS 862, mouth; CBS 863, urine; CBS 1518, baker's yeast; CBS 2192, sorghum malt; CBS 2498, culture medium

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + +/1 + + + +

-

+

-

-/I

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+

-

+ + + +

-

+ + +

V

-

Fig. 229. C. glaebosa, CBS 5691. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 jim.

510

Vc. Descriptions of anamorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

Fermentation NaCl):

Ethylamine 2-Keto-D-gluconate + D-Glucosamine (N)^ 5-Keto-D-gluconate 50% Glucose Saccharate n 10% NaCl/5% glucose d-Glucuronate Starch formation Xylitol + Urease L-Arabinitol Biotin-free Arbutin + Pyridoxine-free Propane 1,2 diol + 0.01% Cycloheximide Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at 25T Cadaverine + Growth at 30°C Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 42.9, 42.4, CBS 5691 {T^\ Nakase and Komagata 1971f; BD: Meyer et al. 1984, respectively); 41.2^3.1, 5 strains; 42.5 CBS 5691 {T^\ Suzuki and Nakase 1993).

Glucose Galactose Sucrose Maltose

Origin of the strains studied: CBS 5691, frozen cuttlefish; CBS 6715, soil. Type strain: CBS 5691. Comments: Suzuki and Nakase (1993) compared strains of C glaebosa and C saitoana as well as 'Torulopsis Candida' strains that have mol% G + C comparable to that of C glaebosa. They found three groups based on DNA reassociation and electrophoretic protein profiles of eight enzymes. The three groups represented three different species, C glaebosa, C. saitoana and a new species which they described as C pseudoglaebosa. CBS 6715, listed above as a member of C glaebosa, is the type strain of the new species. These investigators reported that it is difficult to separate the three species using the traditional physiological tests. They found that C pseudoglaebosa does not assimilate D- and L-arabinose, ribitol, DL-glyceraldehyde and dihydroxyacetone, whereas C. glaebosa and C. saitoana assimilate the latter three compounds and differ in the assimilation of D-arabinose (C. glaebosa, +; C saitoana, - ) and L-arabinose (C saitoana, +; C. glaebosa, - ) . 64.57. Candida glucosophila Tokuol^a, Ishitani, S. Goto & Komagata (1987) The species description presented here was taken from the original description (Tokuoka et al. 1987). Growth in 25% (w/w) glucose-YM broth: After 3 days at 25°C, growth is very poor. After 7 days, the cells are globose to subglobose, (4.2-7.0)x(4.2-7.3)^m, and occur singly, in pairs, in short chains and in clusters. After one month only a sediment is present. Growth on 25% (w/w) glucose-YM agar: After one month at 25°C, the growth is cream-colored, dull, dry, smooth and entire. Slide culture on 25% glucose-corn meal agar: Pseudohyphae are not formed.

(in

media + -

containing

10%

Lactose Raflfinose Trehalose

w/v n

Assimilation (in media containing 10% w/v NaCl): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w n

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics: L-Lysine 2-Keto-D-gluconate n Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n D-Glucuronate n 50% Glucose Xylitol n 10% NaCl/5% glucose Starch formation L-Arabinitol n Arbutin n Urease Propane 1,2 diol n Biotin-free Butane 2,3 diol n Pyridoxine-free Nitrite n 0.01% Cycloheximide Cadaverine n Growth at 37^C Creatinine n Growth at 42''C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 {T^: Tokuoka et al. 1987), Mol% G + C: 36.6, type strain {T^ : Tokuoka et al. 1987).

w n + -

growth + n + n n n n +

Origin of the strain studied: CBS 7349, brown sugar made in Taiwan. Type strain: CBS 7349. Comments: The osmotic requirements of this yeast make it difficuh to conduct the usual morphological and physiological studies. As indicated, 10% NaCl was used in the liquid assimilation and fermentation media and 25% glucose was used in the solid media. 64.58. Candida gropengiesseri (Harrison) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Torula gropengiesseri Harrison (1928) Torulopsis gropengiesseri (Harrison) Lodder (1934) Cryptococcus gropengiesseri (Harrison) Skinner (1950)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are long-ovoidal, (1.52.0)X(3.0-7.0) |im, single and in pairs.

511

64. Candida Berkhout / S.A. Meyer et al.

Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is off-white to cream-colored, glistening, soft, butyrous and entire. Fermentation: Glucose Galactose Sucrose Maltose

s s -

Lactose Raffinose Trehalose

+ +/1 + + v + -/I -/I -/I -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

+

+/1 + +/1

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+/1

+/1

Synonym: Torulopsis haemulonii van Uden & Kolipinski (1962)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are globose, ovoidal and ellipsoidal, (2.0-7.0) x (2.0-7.0) |im, single and in pairs. (Fig. 230). A ring or a thin pellicle may be present.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

64.60. Candida haemulonii (van Uden & Kolipinski) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Ethylamine D-Glucosamine (N)' 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1%) Cycloheximide Growth at 3 0 T Growth at 35"C Growth at 37°C

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). MoI% G + C: 55.7, CBS 156 (BD: Meyer et al. 1984), 57.1, CBS 156 {T^\ Nakase and Komagata 197Id).

Origin of the strains studied: CBS 156, cocoon of cockroach (Periplaneta orientalis); CBS 6387, human toe; CBS 7074, citrus product. Type strain: CBS 156. 64.59. Candida guilliermondii (Castellani) Berkhout (1923) This species has two varieties: Candida guilliermondii (Castellani) Berkhout var. guilliermondii (1952) See Pichia guilliermondii: p. 308 Candida guilliermondii var. membranifaciens (as membranaefaciens) Lodder & Kreger-van Rij (1952) See Pichia ohmeri: p. 329

Fig. 230. C. haemulonii, CBS 5468. After 3 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 fxm.

Dalmau plate culture on corn meal agar: After 14 days at 25°C, primitive pseudohyphae are sometimes present. Aerobic growth is off-white to light beige, smooth, and butyrous with an entire border. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

+/s

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ 1 +/1 1 -/I + +

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 + + + +/1 +/1 V -/I -/I -/I -/I +/1 +/1

+ + +/1 +/1 -

512

Vc. Descriptions of anamorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + L-Lysine + 5-Keto-D-gluconate Ethylamine Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose + + Xylitol V 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin V Urease Propane 1,2 diol V Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at 2>TC + Creatinine Growth at 40"C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 45.9^6.1, 2 strains {T^: Nakase and Komagata 1971d); 47.8, CBS 5149 {T^\ Meyer et al. 1984); 45.4, CDC 86-041135; 46.3, CBS 5149; 47.9, CBS 7801 (T^: Gargeya et al. 1991); 45.6^6.3, 8 strains including the type strain, 46.1 {T^: Ribeiro 1995).

Origin of the strains studied: CBS 5149, gut of bluestriped grunt (Haemulon sciurus); CBS 5150, seawater, Portugal; CBS 5468, water, Florida, USA; CBS 6332, skin of captive dolphin; CBS 6590, human; CBS 8125, furniture polish. Type strain: CBS 5149. Comments: Lehmann et al. (1993) studied twenty-five clinical isolates that had been identified as C. haemulonii. These investigators used electrophoretic isoenzyme profiles, mol% G + C and DNA reassociations, as well as morphological and physiological characteristics, to examine these strains. Two distinct groups were evident and designated Group I and Group II. C haemulonii type strain and eleven isolates comprised Group I. The remaining fourteen isolates made up Group II. Some physiological differences were noted between the two groups. Group I strains demonstrated negative or latent reactions on galactose, sorbose, melezitose, L-arabinose, galactitol, and a-methyl-D-glucoside, whereas the Group II strains showed positive responses on these carbon sources. Ribeiro (1995) examined the CBS strains included in C haemulonii to determine if the two groups were present. DNA reassociation experiments and restriction fragment length polymorphisms showed that most of the strains were the same as the type strain (Group I) and are considered valid members of C haemulonii. One strain demonstrated significant DNA reassociation with members of Group II. Group II strains will be designated a new species. 64.61. Candida homilentoma van der Walt & Nakase (1973) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to elongate, (2.5-3.5)x(3.0-4.5)^im, single and in pairs (Fig. 231). Dalmau plate culture on corn meal agar:

After

Fig. 231. C. homilentoma, CBS 6099. After 3 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 [Jim.

3 days at 25°C, pseudohyphae of long cylindrical cells and septate hyphae with few blastoconidia are present. Aerobic growth is off white, dull, and wrinkled with a mycelial border. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s

-

Lactose Raffinose Trehalose

-

+

s

+ +

-

+ + + +

-

+

-

+ + 1

-

1 + 1

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ + + +

-

+ + + + -/I

-

+ +

-

V

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + L-Lysine + 5-Keto-D-gluconate n Ethylamine + n Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose + Xylitol + + 10% NaCl/5% glucose L-Arabinitol + Starch formation Arbutin + Urease Propane 1,2 diol V Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at 3TC +/w Creatinine Growth at 40"C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 48.3, CBS 6099; 49.0, CBS 6312 {T^: van der Walt and Nakase 1973).

513

4. Candida Berkhout / S.A. Meyer et al.

Origin of the strains studied: CBS 6099, CBS 6312, tunnels and frass of insects infesting trees in South Africa. Type strain: CBS 6312. 64.62. Candida humilis (E.E. Nel & van der Walt) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis humilis E.E. Nel & van der Walt (1968)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25T, the cells are ovoidal, (3.0-6.0x(5.08.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is off-white, smooth, glistening, and butyrous with an entire edge. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+

+ + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n -/I + -

found C. humilis and C. milleri to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. 64.63. Candida incommunis Y. Ohara, Nonomura & T. Yamazaki (1965) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are elongate, cylindrical, (1.5-2.5) X (6.0-12.0) jim, single and in chains (Fig. 232).

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ n -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5 -Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 35°C Cadaverine Growth at 370°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 47.1, CBS 5658 (7;„: Meyer et al. 1984).

Origin of the strain studied: CBS 5658, Bantu beer. Type strain: CBS 5658. Comments: Kurtzman and Robnett (unpublished data)

Fig. 232. C. incommunis, CBS 5604. After 5 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 |im.

Dalmau plate culture on corn meal agar: After 7 days at 25°C, long pseudohyphae of branched chains of cylindrical cells are present. Aerobic growth is off-white with a wrinkled center, a smoother periphery and some pseudomycelial development at the margin. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/1

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Vc. Descriptions of anamorphic ascomycetous genera and species

514

Additional assimilation tests and other growth characteristics:

Ethylamine + 2-Keto-D-gluconate D-Glucosamine (N)^ 5-Keto-D-gluconate 50% Glucose Saccharate 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol Urease L-Arabinitol Biotin-free Arbutin Pyridoxine-free + Propane 1,2 diol 0.1% Cycloheximide + Butane 2,3 diol Nitrite Growth at 35°C + Growth at 37T w/Cadaverine Growth at 40"C Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 8 (Yamada and Kondo 1972a). Mol% G + C: 48.9, CBS 5604 (7;„: Meyer et al. 1984); 44.1, AJ 5007 {T^\ Nakase and Komagata 197If).

Origin of the strain studied: CBS 5604, grape must, Japan. Type strain: CBS 5604. 64.64. Candida inconspicua (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Torulopsis inconspicua Lodder & Kreger-van Rij (1952) Torulopsis inconspicua Lodder & Kreger-van Rij var. filiforme Dietrichson (1954)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0-5.0)x(5.011.0)jim, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25''C, primitive pseudohyphae of short chains of ovoidal cells are sometimes present. Aerobic growth is off-white, semiduU, soft, mostly smooth and entire.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

2-Keto-D-gluconate L-Lysine Ethylamine 5 -Keto-D-gluconate Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Arbutin Urease Biotin-free Propane 1,2 diol Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Growth at 37''C Cadaverine + Growth at 40''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 8 (Yamada and Kondo 1972a). Mol% G + C: 36.3, AJ 5139 {T^\ Nakase and Komagata 1971e); 36.7, CBS 180 (BD: Meyer et al. 1984).

Origin of the strains studied: CBS 180, CBS 1735, CBS 2833, sputum; CBS 990, tongue. Type strain: CBS 180. 64.65. Candida insectalens (D.B. Scott, van der Walt & van der Klift) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis insectalens D.B. Scott, van der Walt & van der Klift (van der Walt et al. 1971b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, (2.0-3.5)X(2.0-3.5) [im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25*^0, pseudomycelial development is not evident. Aerobic growth is off-white, smooth, and convex with an entire margin. Fermentation: absent.

Fermentation: absent. Assimilation:

Additional assimilation tests and other growth characteristics:

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+ + +

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1

-

1 +

-

+/-

-

1

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+

-

1

-

+ +

-

1

-

+/ +

-/

515

64. Candida Berkhout / S.A. Meyer et al.

Additional assimilation tests and other growth characteristics: L-Lysine + 2-Keto-D-gluconate _ n 5 -Keto-D-gluconate Ethylamine D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol _ Starch formation L-Arabinitol Urease Arbutin V Propane 1,2 diol Biotin-free Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite + Growth at 3 7 ^ Cadaverine Growth at 40°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 44.9, CBS 6036 {J^;. Stenderup et al. 1972).

+

-

-/I +

-

+ +

Origin of the strains studied: CBS 6036, CBS 6149, insect tunnels in trees. South Africa. Type strain: CBS 6036. 64.66. Candida insectamans D.B. Scott, van der Walt & van der Klift (van der Walt et al. 1972) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are spheroidal, ovoidal to long ovoidal, ellipsoidal, and cylindrical, (1.5-6.5) x (2.512.0) jjim, single, in pairs and chains (Fig. 233). Pseudohyphae are present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of cylindrical cells with some verticils of ovoidal cells. Aerobic growth is creamcolored with a raised, wrinkled central area, smooth near the periphery and with a fringed margin. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raflfinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + +

-

1

-

+ +

-

1

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ -/I

-

+

-

+ + 1 +

-

+ +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine 5-Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine Growth at 37°C Growth at 40''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 35.9, CBS 6033 (BD: Meyer et al. 1984).

+ + + + +

Origin of the strain studied: CBS 6033, frass of beetle larvae in trees, South Africa. Type strain: CBS 6033. 64.67. Candida insectorum D.S. Scott, van der Walt & van der Klift (van der Walt et al. 1972) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to cylindrical, (1.5-2.0)x(3.0-8.0)|Jim, single and in small groups. Pseudohyphae are present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae of branched chains of cylindrical cells and septate hyphae are present. Aerobic growth is yellowish-white to light tan-colored, mostly creamy, but with some wrinkled areas and a fringed border. Fermentation:

Fig. 233. C. insectamans, CBS 6033. After 3 days in glucose-yeast extract-peptone broth at 25''C. Bar=5 ^im.

Glucose Galactose Sucrose Maltose

+ s s/-

-

Lactose Raffinose Trehalose

Vc. Descriptions of anamorphic ascomycetous genera and species

516

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Assimilation: + + 1 + + + + -/I -/I 1 +

-

+ + +/1 + + -/I

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

-

+ + + + +

-

+ +

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose n Xylitol + Starch formation L-Arabinitol + Urease _ Arbutin + Biotin-free Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+

-

Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 37°C Growth at 4 0 T

+

+ V

V

+

-

Origin of the strains studied: CBS 6213, CBS 6214, insect tunnels in trees, South Africa. Type strain: CBS 6213. 64.68. Candida intermedia (Ciferri & Ashford) Langeron & Guerra (1938) Synonyms: Blastodendrion intermedium Ciferri & Ashford (1929) Cryptococcus intermedins (Ciferri & Ashford) Nannizzi (1934) Mycotorula intermedia (Ciferri & Ashford) Krasil'nikov (1954c) Candida intermedia (Ciferri & Ashford) Langeron & Guerra var. ethanophila Verona & Zardetto de Toledo (1954)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25"C, the cells are ovoidal, (2.4^.0)x(3.06.0) jim, single and in pairs; elongate cells are also present. A thick, wrinkled pellicle is present. Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consist of many branched chains of cylindrical cells. Aerobic growth is white to creamcolored, smooth to slightly wrinkled and soft. Glucose Galactose Sucrose Maltose

+ +/s + V

Lactose Raffinose Trehalose

V

s/-

+ + + + + + + +

-

+ + -/I V

+ -/I -/I -/I V V

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ -/I

-

+/1 V

+ + +/1 + -/I

-

+ +

-

n

-

-/I

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol

+ n n

L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite

—

Cadaverine Creatinine L-Lysine

+

, Utilization

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.5, CBS 6213 {T^ : Stenderup et al. 1972).

Fermentation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

V

+ V

Ethylamine D-Glucosamine (N)^ 50%) Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01%) Cycloheximide 0.1%) Cycloheximide Growth at 3 5 T Growth at 37°C

+ V

n

_ — + V

V

+

of D-glucosamme as a source ot mtroeen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 43.7, AJ 4621; 44.4, AJ 4632; 44.4, AJ 4619 (CBS 592) ( r ^ : Nakase and Komagata 197If)

Origin of the strains studied: CBS 572, feces; CBS 2044, washed beer bottle; CBS 2049, beer; CBS 2879, soil; CBS 5159, skin; CBS 5310, grape (C. intermedia var. ethanophila)', CBS 5460, fruit. Type strain: CBS 572. 64.69. Candida ishiwadae Sugiyama & S. Goto (1969) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are subglobose to ovoidal, (1.5-5.0)x(3.0-6.0)|i,m, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25°C, a few primitive pseudohyphae consisting of chains of elongated cells are present. Aerobic growth is white to slightly cream-colored, mucoid, moist, smooth and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ s/s/+

Lactose Raffinose Trehalose

64. Candida Berkhout / S.A. Meyer et al.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

517

Assimilation: + -/I 1 + + + +

-

+/1

-

+ + 1 +/1 + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + + + -/I + + +/1 + + +/1 + +

-

n +

-

Additional assimilation tests and other growth characteristics;

1 2-Keto-D-gluconate L-Lysine n Ethylamine 5 -Keto-D-gluconate Saccharate D-Glucosamine (N)' D-Glucuronate 50% Glucose Xylitol +/1 10% NaCl/5% glucose Starch formation L-Arabinitol 1 Arbutin + Urease V Propane 1,2 diol Biotin-free V Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide Cadaverine + Growth at 3 5 T Creatinine Growth at 37''C ^ Utilization of D-ghacosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 36.7, CBS 6022 {T^ : Meyer etal. 1984).

+ + + + +

V

+ + +/w

-

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+

-

-/I

-

+ V

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + L-Lysine 5 -Keto-D-gluconate n Ethylamine + Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol n Biotin-free Butane 2,3 diol n Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine + Growth at 3 5 T w Creatinine Growth at 37''C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 8 (Suzuki et al. 1994). Mol% G + C: 34.4, 35.9,, 37.8, 37.3, CBS 5214 {T^: Stenderup et al. 1972; T^: Suzuki et al. 1994; BD: Meyer et al. 1984; T,„: Meyer, unpublished data, respectively).

Origin of the strains studied: CBS 5526, unknown; CBS 6022, soil. Type strain: CBS 6022.

Origin of the strains studied: CBS 2751, CBS 5214, CBS 5215, associated with bark beetles and their larvae (Ernobius spp.). Type strain: CBS 5214.

64.70. Candida karawaiewii Yarrow & S.A. Meyer (1978)

Comments: Suzuki et al. (1994) described a new species, C. stellimalicola, that resembles C. karawaiewii, C. diversa and C silvae in physiological and morphological properties. See Comments for C diversa for more information. Kurtzman and Robnett (unpublished data) found C. ernobii and C. karawaiewii to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. Furthermore, the sequence of Pichia holstii differed by only two nucleotides suggesting that it is either the teleomorph or a sibling species.

Synonym: Torulopsis karawaiewii Jurzitza (1970) nom. nud.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, (2.5-5.0)x(2.5-5.0)^m, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25''C, there is no evidence of pseudohyphae. Aerobic growth is white to cream-colored, smooth, soft, butyrous and entire. Fermentation: Glucose Galactose Sucrose Maltose

+/s -

Lactose Raffinose Trehalose

64.71. Candida krissii S. Goto & lizuka (Goto et al. 1974) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, long oval to cylindrical, (2.0-4.0) x (4.0-7.0) |im, single and in pairs (Fig. 234).

Vc. Descriptions of anamorphic ascomycetous genera and species

518

Comments: Kurtzman and Robnett (1997) found C. krissii and C. zeylanoides to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. 64.72. Candida kruisii (Kockova-Kratochvilova & Ondrusova) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis kruisii Kockova-Kratochvilova & Ondrusova (1971)

Fig. 234. C. krissii, CBS 6519. After 3 days in glucose-yeast extractpeptone broth at IS^'C. Bar = 5 ^m.

Dalmau plate culture on corn meal agar: After 7 days at 25°C, abundant development of pseudohyphae consists of branched chains of cyHndrical cells with verticils of ovoidal blastoconidia. Aerobic growth is off-white, smooth, shiny, butyrous and with an entire to undulating margin. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-/I

1

//-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + 1 + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate + D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin v Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at 3 0 T Cadaverine + Growth at 3 5 T Creatinine ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 43.4, CBS 6519 {T^ : Meyer et al. 1984).

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, long-ovoidal to cylindrical, (2.0-4.0)x(5.0-8.0) |im, single, in pairs and chains (Fig. 235). Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells with ovoidal and elongate blastoconidia in verticils and short chains. Aerobic growth is off-white to cream-colored, smooth, butyrous, shiny and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+ + 1 + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

1 + + 1 -/I 1

s +/1

Origin of the strain studied: CBS 6519, sea water. Type strain: CBS 6519.

Fig. 235. C. kruisii, CBS 6451. After 3 days in glucose-yeast extractpeptone broth at 25"C. Bar = 5 |im.

4. Candida Berkhout / S.A. Meyer et al.

519

Additional assimilation tests and other growth characteristics:

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + L-Lysine + 5-Keto-D-gluconate Ethylamine + Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose -Is Xylitol + 10% NaCl/5% glucose + L-Arabinitol Starch formation Arbutin + Urease Propane 1,2 diol Biotin-free + Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at SO^'C + Creatinine Growth at 35T ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Nakase et al. 1988b). Mol% G + C: 44.6, 45.4, 44.2, CBS 6451 {T^: Meyer et al. 1984; T^ and HPLC: Nakase et al. 1988b, respectively).

2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose + D-Glucuronate 10% NaCl/5% glucose n Xylitol Starch formation L-Arabinitol Urease Arbutin n Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide -/I Nitrite + 0.1% Cycloheximide Cadaverine Growth at 35*'C w/Creatinine Growth at 37°C L-Lysine v ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 8 (Yamada and Kondo 1972a). Mol% G + C: 42.4, type strain {T^\ Nakase and Komagata 1971e); 43.2, CBS 52 (BD: Meyer et al. 1984).

Origin of the strain studied: Boletus purpureus. Type strain: CBS 6451.

CBS 6451, fungus,

64.73. Candida krusei (Castellani) Berkhout (1923) See Issatchenkia orientalis: p. 222 64.74. Candida lactis-condensi (B.W. Hammer) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms; Torula lactis-condensi B.W. Hammer (1919) Torulopsis lactis-condensi (B.W. Hammer) Lodder & Kreger-van Rij (1952) Torulopsis caroliniana Etchells & T.A. Bell (1950b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25T, the cells are ovoidal, (1.5-2.5)x(3.07.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are not present. Aerobic growth is white, butyrous, soft and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+ -

+ + +/1 -

vV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Origin of the strains studied: CBS 52, sweetened condensed milk; CBS 53, CBS 54 (syntype of Torulopsis caroliniana), fermenting brined cucumbers. Type strain: CBS 52. Comments: This species usually grows very poorly and is difficult to maintain in culture. 64.75. Candida laureliae C. Ramirez & A. Gonzalez (1984f) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (3.0-4.0)x(5.07.0) [im, single and in pairs (Fig. 236). Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongate cells, sometimes with verticils of ovoidal blastoconidia. Aerobic growth is white, shiny, and smooth with some tufts of pseudohyphal development. Fermentation: Glucose Galactose Sucrose Maltose

s

-

Lactose Raffinose Trehalose

r^^

Fig. 236. C. laureliae, CBS 8180. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 |im.

520

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Vc. Descriptions of anamorphic ascomycetous genera and species

+ +

-

1

-

+

-

1

-

N-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

1 1 + +

-

+ +

-

+

-

+ +

-

Fig. 237. C. llanquihuensis, CBS 8180. After 3 days in glucose-yeast extract-peptone broth at 25*^0. Bar = 5 [xm.

-

D a l m a u plate culture o n corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongate cells with verticils of ovoidal blastoconidia. Aerobic growth is white, waxy, and dull with an irregular margin. Fermentation:

1

Additional assimilation tests a n d other g;ro^ characteristics:

+ 2-Keto-D-gluconate L-Lysine + n 5 -Keto-D-gluconate Ethylamine + Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol + 10% NaCl/5% glucose -/ L-Arabinitol Starch formation + Arbutin Urease + Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at 25T + Creatinine Growth at 30X ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 44.9, type strain {T^ : Tengku Zainal Mulok 1988).

Origin of the strain studied: CBS 8180, rotten wood, Chile. Type strain: CBS 8180. C o m m e n t s : This species resembles Pichia pini in morphology and physiology. Kurtzman and Robnett (1997) found C laureliae and C ralunensis to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, and to differ by only one nucleotide from C. boleticola, thus indicating the three taxa to be conspecific. 64.76. Candida lipolytica (Harrison) Diddens & Lodder (1942) See Yarrowia lipolytica'. p . 420 64.77. Candida llanquihuensis Gonzalez (1984f)

K.*^

C . Ramirez & A .

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.5-7.0)X(5.0-7.0) |im, single and in pairs (Fig. 237).

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s -

Lactose Raffinose Trehalose

s

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

1

-

+

-

+ + + 1

-

+ +

-

+ + +

Additional assimilation tests and other g roi characteristics: 2-Keto-D-gluconate L-Lysine + +

5 -Keto-D-gluconate n Ethylamine + Saccharate D-Glucosamine (N)' + D-Glucuronate 50% Glucose Xylitol + 10% NaCl/5% glucose L-Arabinitol + Starch formation Arbutin Urease Propane 1,2 diol Biotin-free + Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at 30°C + Creatinine Growth at 35T ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 40.5, type strain {T^ : Tengku Zainal Mulok 1988).

64. Candida Berkhout / S.A. Meyer et al.

Origin of the strain studied: CBS 8182, rotten wood, Chile. Type strain: CBS 8182. 64.78. Candida lusitaniae van Uden & do CarmoSousa (1959) See Clavispora lusitaniae: p. 148 64.79. Candida lyxosophila van der Walt, N.P. Ferreira & Steyn (1987a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, ovoidal to ellipsoidal, (3.5-5.0)x(3.5-6.0) |Jim, single and in pairs. Pseudohyphae are present (Fig. 238). Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongate cells with ovoidal blastoconidia; septate hyphae may be present. Aerobic growth is white, smooth, soft and butyrous with a mycelial margin. Fermentation: Glucose Galactose Sucrose Maltose

s s

-

Lactose Raffinose Trehalose

s

521

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+ n

-

+/1

-

+

-

+

-

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 35"C Growth at 3 7 T

+

+

-

+ + V

V

-

^ Utilization of D-gliacosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 37.9, CBS 8194 (van der Walt et al. 1987a); 38.2, CBS 8194 {T^: Meyer, unpubHshed data)

Origin of the strains studied: CBS 7268, CBS 8194, surface woodland soil. South Africa. Type strain: CBS 8194.

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + + +

-

+/1

-

+ +

-

+/1

-

1

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ 1

-

+

-

+ + + +

-

+ + +

-

64.80. Candida magnoliae (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Torulopsis magnoliae Lodder & Kreger-van Rij (1952) Entelexis magnoliae van der Walt & E. Johannsen (1973)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are uniformly globose to slightly ovoidal, (2.0^.0)x(3.0-4.5) |im, and occur singly and with buds. A few short chains and small clusters are present (Fig. 239). Dalmau plate culture on corn meal agar: After 14 days at 25*'C, pseudohyphae are not present. Aerobic growth is white, smooth, creamy and entire.

^:;^

Fig. 238. C. lyxosophila, CBS 8194. After 3 days in glucose-yeast extract-peptone broth at 2 5 ^ . Bar = 5 ^m.

Fig. 239. C. magnoliae, CBS 166. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 |im.

Vc. Descriptions of anamorphic ascomycetous genera and species

522

Fermentation:

investigators state that these five DNA groups should be considered distinct species.

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

64.81. Candida maltosa Komagata, Nakase & Katsuya (1964)

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/1 V V V V V V -

Synonyms: Candida cloacae Komagata, Nakase & Katsuya (1964) Candida nouellus Watanabe, Shimada, Kawaharada, K. Suzuki & Tanaka (1973) nom. nud. Candida subtropicalis Nakase, Fukazawa & Tsuchiya (1972)

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (3.0-5.0)X(4.0-7.0) |im, and occur singly or in pairs or small groups (Fig. 240). Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consist of cylindrical cells with verticils of ovoidal blastoconidia. Aerobic growth is white, creamy, soft, smooth or slightly folded with a fringed margin. Fermentation:

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+ n V v v v + + +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% 0.01% Cycloheximide 0.1% Cycloheximide Growth at 37°C Growth at 4 0 T

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: + +

-/I

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 60.0, type strain (7;^: Nakase and Komagata 197Id).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/1 + + +/1 +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + +/1 + + + +/1 v -/I + v + -

Origin of the strains studied: CBS 166, flower of Magnolia sp.; CBS 2250, bumble bee's gut; CBS 2800, -/I gut of a bee, Croatia; CBS 2677, concentrated orange juice, South Africa; CBS 5659, larval feed of Xylocarpa caffra; CBS 6396, larval pabulum of Xylocopa scioensis. Additional assimilation tests and other growth South Africa; CBS 6201, beak of a dead tern; CBS 3086, characteristics: L-Lysine + 2-Keto-D-gluconate human sputum, Netherlands; CBS 6424, unknown. Ethylamine +/1 5-Keto-D-gluconate Type strain: CBS 166. D-Glucosamine (N)^ Saccharate Comments: Nakase et al. (1994a) reported on the heterogeneity among strains of C. magnoliae. They used mol% G + C, DNA hybridization and electrophoretic comparisons of seven different enzymes to study 10 strains previously identified as C magnoliae. They found five DNA homology groups and four enzyme groups. One enzyme group was split into two DNA groups. These

50% Glucose D-Glucuronate 10% NaCl/5% glucose +/1 Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free -/I Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at 3 7 T Cadaverine + Growth at 4 0 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen.

+/1

Candida Berkhout / S.A. Meyer et al. Co-Q: 9 (Yamada and Kondo 1972a; Kaneko et al. 1977). Mol% G + C: 36.3, AJ 4718 {T^: Nakase and Komagata 1971f); 35.636.8, 6 strains {T^: Meyer et al. 1975); 36.1, CBS 5611; 36.6, ATCC 20184; 37.3, #36 (CBS 6658) and CBS 6465 {T^: Kaneko et al. 1977); 36.6, CBS 6658; 36.8, CBS 6680 {T^: Su and Meyer 1991).

Fig. 240. C. maltosa, CBS 6680. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 ^im.

Origin of the strains studied: CBS 5611, neutralizing tanks for monosodium glutamate; CBS 5612 (type strain of C. cloacae), mud; CBS 6465 (type strain of C subtropicalis), atmosphere; CBS 6658 (C nouellus), CBS 6680, soil, Japan; CBS 7327, waste water, Germany Type strain: CBS 5611. Comments: Meyer et al. (1975) and Kaneko et al. (1977) employed DNA reassociation to demonstrate that C. maltosa is distinct from C sake and C tropicalis. These species are separated on the basis of maximum temperature for growth, assimilation of soluble starch and growth in the presence of cycloheximide.

Assimilation:

523

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

Cadaverine Creatinine L-Lysine

+

-

+/1

-

+

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + +/1

-

+/1

-

+ +

-

+

-

Additional assimilation tests and other g roYv characteristics: + 2-Keto-D-gluconate Ethylamine D-Glucosamine (N)^ 5-Keto-D-gluconate Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Starch formation Xylitol + L-Arabinitol Urease Arbutin Biotin-free + Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide Nitrite 0.1%) Cycloheximide -

+

Growth at 3 5 T Growth at 37"C Growth at 40°C

+ w

-

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Yamada and Kondo 1972a). Mol% G + C: 47.3, CBS 5151 {T^: Nakase and Komagata 1971d); 50.9, CBS 5151 (BD: Meyer et al. 1984).

Origin of the strain studied: CBS 5151, sea water. Torres Strait, Australia. Type strain: CBS 5151. 64.83. Candida maritima (Siepmann) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983)

64.82. Candida maris (van Uden & Zobell) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis maris van Uden & Zobell (1962)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.0^.0) X (2.5-^.5) [im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is cream-colored, soft, smooth and entire. Fermentation: absent.

Synonyms: Trichosporon maritimum Siepmann (Siepmann and Hohnk 1962) Candida maritima (Siepman) van Uden & H.R. Buckley (1970) nom. inval. Candida pilmaiquensis C. Ramirez & A. Gonzalez (1984g)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are primarily ovoidal, (3.05.0)X(3.5-8.0) |im, single and in pairs; cylindrical cells also are present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells with verticils of ovoidal blastoconidia. Aerobic growth is off-white to cream-colored, soft, smooth to wrinkled, and glistening with an irregular or mycelial border.

524

Fermentation: Glucose Galactose Sucrose Maltose

Vc. Descriptions of anamorphic ascomycetous genera and species

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + +/1 + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate V L-Lysine 5-Keto-D-gluconate n Ethylamine Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol + 10% NaCl/5% glucose L-Arabinitol V Starch formation Arbutin + Urease Propane 1,2 diol V Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine + Growth at SO^'C Creatinine Growth at ST^C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 45.4, type strain (7;^: Meyer et al. 1984); 46.8, CBS 8176 {T^: M.Th. Smith, personal communication).

Origin of the strains studied: CBS 1969, CBS 6069, tanning fluid; CBS 4112, tunnel of ambrosia beetle; CBS 4606, beetle; CBS 5107, sea; CBS 8176 (type strain of C. pilmaiquensis), rotten wood, Chile. Type strain: CBS 5107. 64.84. Candida melibiosica H.R. Buckley & van Uden (1968) Synonyms: Candida parapsilosis (Ashford) Langeron & Talice var. hokkai S. Goto & Yokotsuka (1962b) Torulopsis navarrensis Moriyon & Ramirez (1974) Candida navarrensis (Moriyon & C. Ramirez) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Torulopsis pampelonensis C. Ramirez & A.T. Martinez (1978) Candida pampelonensis (C. Ramirez & A.T. Martinez) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.5-4.5)X(2.5-5.0) |im, single and in pairs.

Dalmau plate culture on corn meal agar: After 7 days at 25''C, primitive pseudohyphae of short, branched chains of cells are present. This type of growth gives a bushy, feathery appearance. Aerobic growth is cream-colored, butyrous, soft, lobated and entire. An occasional tuft of pseudohyphal growth is evident. Fermentation: Glucose Galactose Sucrose Maltose

+ s -/s -/s

Lactose Raffinose Trehalose

+ + V + + + + + +/1 + +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-/s -/s

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-/I V

+

4-/1

+/1

V

+ +/1 + +

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose +/1 Xylitol + Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 2>TC Cadaverine + + Growth at 40*'C Creatinine w/^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 54.5-55.5, 3 strains (7;^: Meyer et al. 1984); 55.9, AJ 4611 {T^: Nakase and Komagata 1971f): 54.1, CBS 5605; 55.1, CBS 6612; 55.6, CBS 6611; 56.8, CBS 5814 {T^: Daniel 1983).

Origin of the strains studied: CBS 5605 (type strain of C parapsilosis var. hokkai), wine; CBS 5814, soil; CBS 6211, insect tunnels in wood; CBS 6611 (type strain of Torulopsis pampelonensis), CBS 6612, (type strain of Torulopsis navarrensis), soil, Spain. Type strain: CBS 5814. Comments: Daniel (1983) employed DNA reassociation and protein electrophoretic techniques to demonstrate the conspecificity of Torulopsis pampelonensis, T navarrensis, C. parapsilosis var. hokkai and C. melibiosica.

64. Candida Berkhout / S.A. Meyer et al.

64.85. Candida membranifaciens^ (Lodder & Kreger-van Rij) Wickerham & K.A. Burton (1954b) Synonyms: Candida melibiosi Lodder & Kreger-van Rij var. membranifaciens (as membranaefaciens) Lodder & Kreger-van Rij (1952) Candida majoricensis Genestar Serra (1956) Procandida majoricensis (Genestar Serra) Novak & Zsolt (1961)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25T, the cells are ovoidal, (2.5-6.0)x(3.58.0) |i-m, single and in clusters. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical or long-ovoidal cells with verticils of ovoidal blastoconidia. Septate hyphae may be present. Aerobic growth is off-white to chalky, dull, powdery, dry, and partly wrinkled with a mycelial border. Fermentation: Glucose Galactose Sucrose Maltose

s -/s s -Is

+ + +/1 + + + + + + + + -/I + + + + v v

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + +

64.86. Candida mesenterica (Geiger) Diddens & Lodder (1942) Synonyms: Pseudomonilia mesenterica Geiger (1910) Azymoprocandida mesenterica (Geiger) Novak & Zsolt (1961) Pseudomonilia albomarginata Geiger (1910) Candida albomarginata (Geiger) Windisch (1953)

Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells. Septate hyphae are present. Aerobic growth is white to cream-colored, dull, wrinkled with a fringed margin.

V

+ + +/1 + +

Additional assimilation tests and other growth characteristics:

Ethylamine 2-Keto-D-gluconate + D-Glucosamine (N)^ 5-Keto-D-gluconate Saccharate n 50% Glucose 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol + Urease L-Arabinitol + Biotin-free Arbutin + Pyridoxine-free Propane 1,2 diol v 0.01%) Cycloheximide Butane 2,3 diol Growth at 35°C Nitrite Growth at 37°C Cadaverine + Growth at 40°C Creatinine L-Lysine v ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 33.4, CBS 2875 {T^ : Stenderup et al. 1972).

Origin of the strains studied: CBS 1952, urine; CBS 2090, scale insect {Pulvinaria sp.), received as Oospora sriniuasii; CBS 2296, leprous ulcer; CBS 2297, tree (Eucalyptus saligna); CBS 2875 (type strain of C. majoricensis), tanning fluid; CBS 4430, CBS 4432, unknown; CBS 6060, Lake Champlain, USA. Type strain: CBS 1952.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, elongate and cylindrical, (1.5-2.0)x(6.0-12.0)^im, in chains and clusters. Pseudohyphal growth is also present. Islets are present or an incomplete pellicle may form.

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

525

Fermentation:

Glucose Galactose Sucrose Maltose

-/s

Lactose Raffinose Trehalose

+ + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

The original spelling, membranaefaciens, has been treated as an orthographic error.

-/I -/I -/I V -/I

+/1 + + + +

+ +/1

526

Vc. Descriptions of anamorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol V Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 2 5 T Cadaverine + Growth at 3 0 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 47.6, one strain {T^\ Meyer and Phaff 1972).

Origin of the strains studied: CBS 602, 2094, beer conduits in breweries; CBS 2095 (type strain of Pseudomonilia albomarginata); CBS 6299, beer; CBS 2210, wort. Type strain: CBS 602. 64.87. Candida methanosorbosa (Abe & Yokote) J.A. Barnett, R.W. Payne & Yarrow (1983) Synonyms: Torulopsis methanosorbosa Abe & Yokote (Yokote et al. 1974) Torulopsis nagoyaensis Asai & Makiguchi (Asai et al. 1976) Candida nagoyaensis (Asai & Makiguchi) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are globose to ovoidal, (3.04.0)X(3.0-5.0) |im, single and in pairs (Fig. 241). Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is off-white to cream-colored, smooth, soft, glistening and entire. Fermentation:

Glucose Galactose Sucrose Maltose

+ s

Lactose Raffinose Trehalose

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + v + + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + 1 + + + + -

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate D-Glucosamine (N)^ 5-Keto-D-gluconate 50% Glucose Saccharate n 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol + Urease L-Arabinitol + Biotin-free Arbutin + Pyridoxine-free Propane 1,2 diol 0.01% Cycloheximide Butane 2,3 diol 0.1% Cycloheximide Nitrite + Growth at 37^C Cadaverine + Growth at 40°C Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: Not determined.

+ -

+ + + +

Origin of the strains studied: CBS 6852 (type strain of Torulopsis nagoyaensis); CBS 6853, sewage, Nagoya, Japan; CBS 7029, soil, Japan. Type strain: CBS 7029. 64.88. Candida milleri Yarrow (1978) Synonyms: Torulopsis acidi-lactici Nakase, Komagata & Konishi (1977) Torulopsis holmii (Jorgensen) Lodder var. acidi-lactici C. Ramirez & Sierra (1956)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (3.5-6.0)X(4.0-7.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25'^C, pseudohyphae are not present. Aerobic growth is off-white to cream-colored, smooth, glistening and entire. ffp:i,^:c^'f-

••••:.• J

J

J

Fig. 241. C. methanosorbosa, CBS 7029. After 3 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 [im.

Fermentation: Glucose Galactose Sucrose Maltose

+ + +

-

Lactose Raffinose Trehalose

-

+ +/s

64. Candida Berkhout / S.A. Meyer et al.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+

-

+

-

+

-

-/I

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

V V

-

V V Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free + V Butane 2,3 diol 0.01% Cycloheximide V Nitrite 0.1% Cycloheximide Cadaverine Growth at 35°C -/I Growth at 37''C Creatinine L-Lysine -

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 46.1-46.8, 3 strains (Yarrow 1978); 48.0-48.3, 3 strains (T-jniNakaseetal. 1977).

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

527

+

-

+ -/I + +

_ + +

_ +

_ _ +

_ -/I -/I + + -/I + +

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+

_ 1 +

_ -/I -/I + +/1

_ _ +

_ + +

_ _ _

Additional assimilation tests and other g row characteristics: 2-Keto-D-gluconate L-Lysine + 5-Keto-D-gluconate Ethylamine + n Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose + Xylitol + 10% NaCl/5% glucose + Starch formation L-Arabinitol Arbutin Urease Propane 1,2 diol Biotin-free 1 Butane 2,3 diol Pyridoxine-free + Nitrite 0.01% Cycloheximide -

Cadaverine + Growth at 3 7 ^ + Creatinine Growth at 40T ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 46.1, 44.3, CBS 2032 (T^: Nakase and Komagata 197If; BD: Kurtzman 1990c, respectively).

Origin of the strains studied: CBS 2664 (type strain of Torulopsis acidi-lactici), from alpechin, Spain; CBS 6897, CBS 8195, sour dough, USA and Finland, respectively. Type strain: CBS 6897. Origin of the strain studied: CBS 2032, miso. Type strain: CBS 2032. Comments: Kurtzman and Robnett (unpublished data) found C humilis and C milleri to have identical sequences Comments: Kurtzman (1990c) employed DNA reassoin a 600-nucleotide region at the 5' end of large subunit ciation studies to demonstrate that the proposed anamorphic/teleomorphic relationship (Yarrow 1984d) between (26S) rDNA, indicating the two taxa to be conspecific. C. mogi and Zygosaccharomyces rouxii is not justified. No significant DNA relatedness between the C. mogii 64.89. Candida mogii Vidal-Leiria (1967) type strain and any of the nine species included in Synonyms: Zygosaccharomyces was revealed. Torulopsis miso Mogi (1938a) nom. nud. Torulopsis miso a var. 1 Mogi (1938a) nom. nud. Torulopsis miso a var. 2 Mogi (1942) nom. nud.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are long-ovoidal, (1.01.5)x(3.0-6.0)(im, single, in pairs and short chains. Pseudohyphae may be present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongated cells, sometimes with verticils of blastoconidia. Aerobic growth is off-white, soft, smooth or wrinkled.

64.90. Candida montana S. Goto & Oguri (1983) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0-3.0)x(4.05.5) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25°C, short, primitive pseudohyphae are present. Aerobic growth is off-white to cream-colored, butryous, soft and entire. Fermentation: absent.

Vc. Descriptions of anamorphic ascomycetous genera and species

528

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + 1 + + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol + Pyridoxine-free Butane 2,3 diol + 0.01% Cycloheximide Nitrite Growth at 30°C Cadaverine + Growth at 35''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Goto and Oguri 1983). Mol% G + C: 35.6, CBS 8057 (7;^ Goto and Oguri 1983).

+ + -

+ +

Origin of the strain studied: CBS 8057, wild grapes {Vitis coignetiae), Japan. Type strain: CBS 8057. Comments: The results here differ from the original description. Goto and Oguri (1983) reported weak fermentation of glucose, very weak assimilation of raffinose, melezitose and a-methyl-D-glucoside, assimilation of glucitol and lactate, growth at 37°C and weak growth in vitamin-free medium.

Fermentation:

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/1 -/I -/I -/I

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/1

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine 5 -Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 30°C Cadaverine Growth at 35°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 35.4, type strain {T^\ Meyer et al. 1984).

Origin of the strains studied: CBS 6524, CBS 6525, CBS 8140, raspberries, UK. Type strain: CBS 6524. 64.92. Candida musae (Nakase) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis musae Nakase (1971b)

Growth in glucose-yeast extract-peptone broth: 64.91. Candida multigemmis (Buhagiar) S.A. Meyer After 3 days at 25°C, the cells are subglobose to & Yarrow (Yarrow and Meyer 1978) ovoidal, (3.0-5.0)x(4.0-8.0)^m, single and in small Synonym: groups (Fig. 242). Torulopsis multigemmis (as T. multis-gemmis) Buhagiar (1975) Dalmau plate culture on corn meal agar: After Growth in glucose-yeast extract-peptone broth: 14 days at 25°C, pseudohyphae are not present, but chains After 3 days at 25°C, the cells are spheroidal to ovoidal, of budding cells are sometimes present. Aerobic growth is (2.5-6.5)x(3.0-6.5)|im, single and in pairs. white, creamy, smooth, soft and entire. Dalmau plate culture on corn meal agar: After Fermentation: + Lactose 14 days at 25°C, pseudohyphae are absent or consist of Glucose Galactose Raffinose short chains of budding cells. Aerobic growth is white, Sucrose Trehalose s smooth, creamy, semi-glossy and entire. Maltose -

529

64. Candida Berkhout / S.A. Meyer et al.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + -/I 1

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1 + + 1 + + 1 1 + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin s Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at WC Cadaverine + Growth at 35°C Creatinine ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 47.8, 48.0, CBS 6381 {T^ Nakase 1971b; T^: unpublished data, respectively).

Origin of the strain studied: Japan. Type strain: CBS 6381.

+ + n

+

Meyer,

CBS 6381, banana,

Comments: Kurtzman and Robnett (1997) found C. fructus and C musae to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific.

64.93. Candida naeodendra van der Walt, E. Johannsen & Nakase (1973) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.0-3.0)x(2.0-5.0)|im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25'^C, pseudohyphae are essentially absent, however, short chains of cells are sometimes present. Aerobic growth is cream-colored, soft, smooth with an entire or irregular border. Fermentation: Glucose Galactose Sucrose Maltose

+ 1 -

Lactose Raffinose Trehalose

+ + 1 + + + + + + + + 1 + 1 +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)' Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 37°C Cadaverine + Growth at 4 0 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 38.3, CBS 6032 {T^ van der Walt et al. 1973).

Origin of the strain studied: CBS 6032, frass of buprestid larvae, South Africa. Type strain: CBS 6032.

Fig. 242. C. musae, CBS 6381. After 5 days in glucose-yeast extractpeptone broth at 2 5 ^ . Bar = 5 |im.

Comments: Kurtzman and Robnett (1997) found C. diddensiae and C naeodendra to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific.

530

Vc. Descriptions of anamorphic ascomycetous genera and species

64.94. Candida nanaspora Saez & Rodrigues de Miranda (1988) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are subglobose to ovoidal, (2.0-3.5)X(3.0-5.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is white, butyrous, smooth, soft and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+

+ + + + + -/I + + 1

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + n + -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine 5 -Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.1% Cycloheximide Cadaverine Growth at 3 7 T Growth at 40''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (C.-R Lee et al. 1994b). Mol% G + C: 36.6, type strain {T^\ Meyer, unpublished data).

+ + -

+ + +

Origin of the strain studied: CBS 7200, male ape {Cebus apella), France. Type strain: CBS 7200. 64.95. Candida natalensis van der Walt & Tscheuschner (1957a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to elongate, (2.5-7.0)x(6.0-14.0)(im, in pairs and chains. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of

elongate cells. Aerobic growth is white, soft, and smooth with an irregular edge. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/1

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + +/1 + + + 1 + + + 1 -

Additional assimilation tests and other growth characteristics: + L-Lysine + 2-Keto-D-gluconate 5-Keto-D-gluconate + Ethylamine + Saccharate D-Glucosamine (N)^ n D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin + Urease Propane 1,2 diol Biotin-free Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide 1 Nitrite + 0.1% Cycloheximide Cadaverine Growth at 3 0 T , Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 37.4, CBS 2935 {T^: Suzuki and Nakase 1988b); 36.8, AJ 4772 (CCY-29-44-1) {T^\ Nakase and Komagata 1971f).

Origin of the strain studied: CBS 2935, soil, South Africa. Type strain: CBS 2935. Comments: This species was considered a synonym of C sake (Meyer et al. 1984), but was restored to species status by Suzuki and Nakase (1988b) as the result of DNA hybridization experiments. Also, Fukazawa et al. (1975) showed that C. natalensis differed from C. sake on the basis of serological analysis and proton magnetic resonance spectra of cell wall mannans, and Montrocher and Claisse (1984) reported that these species differed in antigenic structure as well as the absorption spectra of cytochromes. A new species, C.fragi, described by Suzuki et al. (1991) has physiological properties similar to C natalensis, C. oleophila and C sake, but is distinguished from these species on the basis of DNA relatedness, electrophoretic enzyme patterns and

64. Candida Berkhout / S.A. Meyer et al.

531

proton magnetic resonance (PMR) spectra of the cell wall mannans.

64.97. Candida nitratophila (Shifrine & Phaff) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

64.96. Candida nemodendra (van der Walt, van der Klift & D.B. Scott) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Synonym: Torulopsis nitratophila Shifrine & Phaff (1956)

Synonym: Torulopsis nemodendra van der Walt, van der Klift & D.B. Scott (1971b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0-3.0)x(3.06.0) (im, single and in pairs (Fig. 243).

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are globose to subglobose, (2.2^.3) \im, and occur singly and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is off-white, butyrous, smooth, soft, shiny and entire. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + V + -

+ + +/1 + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Fig. 243. C. nitratophila, CBS 2027. After 3 days in glucose-yeast extract-peptone broth at 25*'C. Bar = 5 (im.

+/1

Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are not present. Aerobic growth is off-white, butyrous, mostly smooth, soft, glossy and entire. Fermentation:

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

n + + + + +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 35°C Growth at 3 7 T

Glucose Galactose Sucrose Maltose

s s/-

Lactose Raffinose Trehalose

Assimilation:

+ + v w

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (J.-D. Lee and Komagata 1980a). Mol% G + C: 43.2, CBS 6280 (7;^: Stenderup et al. 1972); 39.5, one strain {T^\ J.-D. Lee and Komagata 1980a); 42.4, CBS 6280 (7;^: Meyer et al. 1984).

Origin of the strains studied: CBS 6185, CBS 6280, tunnels of beetles. South Africa. Type strain: CBS 6280.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Vc. Descriptions of anamorphic ascomycetous genera and species

532

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine + Ethylamine + 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.1% Cycloheximide + Nitrite Growth at 3 5 T +/w Cadaverine Growth at 3 7 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Yamada and Kondo 1972a). Mol% G + C: 36.6, CBS 2027 {T^: Nakase and Komagata 1971b).

Origin of the strain studied: CBS 2027, bark beetles in a conifer. Type strain: CBS 2027. 64.98. Candida norvegica (Reiersol) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Torulopsis noruegica Reiersol (1958) Paratorulopsis noruegica (Reiersol) Novak & Zsolt (1961) Torulopsis uuae (PoUacci & Nannizzi) Lodder var. miso Mogi (1939) Torulopsis vanzylii van der Walt & van Kerken (1961b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, (3.0-6.0) |im, single and in pairs (Fig. 244). Dalmau plate culture on corn meal agar: After 14 days at 25°C, short, branched chains of cells are sometimes present. Aerobic growth is white, butyrous, smooth, shiny and entire. Fermentation: Glucose Galactose Sucrose Maltose

+/s

-

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+/1

-

-/I

-

V

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+ +/1

-

+ -/I + + +

-

+

-

Additional assimilation tests and other growth characteristics: + Ethylamine 2-Keto-D-gluconate D-Glucosamine (N)^ 5-Keto-D-gluconate n 50% Glucose Saccharate 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol V Urease L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+ + + + +

-

+

Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 30*'C Growth at 35°C

-/I

V V

+

-

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 41.7, CBS 4239 (BD: Stenderup et al. 1972); 40.7, CBS 4239 (BD: Meyer et al. 1984); 41.2 , CBS 4239 (Tengku Zainal Mulok 1988).

Origin of the strains studied: CBS 2669, bottlewashing machine; CBS 2670, washed bottles; CBS 2874, miso {Torulopsis uuae var. miso); CBS 4027, CBS 4239, sputum; CBS 6575, seawater. Type strain: CBS 4239. Comments: Tengku Zainal Mulok (1988) showed by DNA reassociation studies that CBS 1784, a strain from apple must that had been considered a representative of C noruegica, had insignificant DNA relatedness with the type strain of the species. Other strains are under investigation to determine their species identity.

Fig. 244. C noruegica, CBS 4239. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 |im.

64.99. Candida odintsovae^ Bab'eva, Reshetova, Blagodatskaya & Galimova (1989) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are ovoidal, long ovoidal to cylindroidal, (2.0^.5)x (2.5-11.0) ^im, single and with buds. Some cells are slightly curved while others appear claviform or somewhat triangular or tear-drop shaped.

The original spelling, Candida odintsouii, has been treated as an orthographic error.

64. Candida Berkhout / S.A. Meyer et al.

Growth in yeast nitrogen base+ 0.5% glucose: After 3 days at 25°C, a thick, folded pellicle is present and growth adheres to the walls of the tube. Dalmau plate culture on corn meal agar: After 7 days at 25°C, abundant, entwined pseudohyphal growth is present. Some cells are curved and some of the growth appears 'bushy' or feathery and does not extend far from the streak. Aerobic growth is white to off-white, smooth, and dull to somewhat chalky with a mycelial margin. Fermentation: Glucose Galactose Sucrose Maltose

533

64.100. Candida oleophila Montrocher (1967) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, a few cells are spheroidal, but most are ovoidal or long-ovoidal to elongate, (2.9-4.3) x (4.36.5) |im. They occur singly, in pairs, and in short branched and unbranched chains. Slender cylindrical cells, (1.53.6)X(4.3-9.4) fxm, are also present, as well as cells that are slightly curved. A thin, delicately wrinkled pellicle is present (Fig. 245).

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

AA-Acetyl-D-glucosamine Methanol Ethanol + Glycerol + Erythritol Ribitol 1 Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside + Salicin + D-Gluconate + DL-Lactate + Succinate + Citrate + Inositol Hexadecane Nitrate Vitamin-free -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine + 5 -Keto-D-gluconate Ethylamine + Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.01% Cycloheximide Cadaverine Growth at ?>TC + Creatinine Growth at 40°C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Bab'eva et al. 1989). Mol% G + C: 36.0-36.6, 5 strains (HPLC: Bab'eva et al. 1989); 38.3, CBS 6025 {T^'. Meyer, unpublished data).

Origin of the strains studied: CBS 6025, CBS 6026, sap of birch (Betula verrucosa), Russia. Type strain: CBS 6026. Comments: Bab'eva et al. (1989) reported the fermentation of maltose (weak, slow), the assimilation of 5-ketogluconate and the maximum growth temperature of 42°C. They pointed out that the most characteristic feature of this species is its high glucosidase activity.

Fig. 245. C. oleophila, CBS 2219. After 5 days in glucose-yeast extractpeptone broth at 25*'C. Bar = 5 |im.

Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells, sometimes with verticils of ovoidal blastoconidia. Aerobic growth is off-white, dull, both smooth and delicately wrinkled, and the margin is usually entire with a few tufts of pseudohyphal growth. Fermentation: Glucose Galactose Sucrose Maltose

+ +/s -/I

Lactose Raffinose Trehalose

-/I

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-/I -/I

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/1

+ +/1

Vc. Descriptions of anamorphic ascomycetous genera and species

534

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine

+ n n

-

+/1

-

+

-

+

-

growth

L-Lysine Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.1% Cycloheximide Growth at 30''C Growth at 3 5 T

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Nakase et al. 1988b). Mol% G + C: 40.7, CBS 2219; 41.5, CBS 4371 and CBS 6106 {T^: Meyer et al. 1984); 42.2, NRRL Y-2317 (CBS 2219) {T^: Nakase and Komagata 197If); 43.7, UCD-FST 62-4 = CBS 2219 {T^: Meyer and Phaff 1972); 41.7, 40.1, CBS 2219 {T^ and HPCL, respectively: Nakase et al. 1988b).

Origin of the strains studied: CBS 2219, olives, Italy; CBS 2220, a flower; CBS 4371, cider, UK; CBS 6106, tonic water. Type strain: CBS 2219. Comments: The three strains identified as C oleophila were at one time included in C sake. Meyer and Simione (1978; unpublished data) showed by DNA reassociation that these strains were C oleophila. Fukazawa et al. (1975) demonstrated that C. oleophila and C. sake differed on the basis of antigenic structure and the proton magnetic resonance spectra of their cell wall mannans. Also, Montrocher (1980) demonstrated that these species are serologically distinct and Montrocher and Claisse (1984) showed that they have different cytochrome absorption spectra as well as antigenic differences. Three species, C. rignihuensis, C. railenensis and Apiotrichum osualdi, described by Ramirez and Gonzalez (1984c,g), were thought to be members of C. oleophila (Barnett et al. 1990). Tengku Zainal Mulok (1988) showed by DNA reassociation that the latter two species were not representatives of C oleophila, but they themselves are conspecific. C. railenensis has priority. C. rignihuensis and several strains in the CBS collection considered to be members of C. oleophila based on morphological and physiological properties demonstrated different whole cell protein electrophoretic patterns and different nuclear DNA restriction fragment length polymorphisms (Park and Meyer, unpublished data). These strains have been removed from C. oleophila for fijrther study. C. fragi, 3. new species described by Suzuki et al. (1991) has physiological properties similar to C oleophila, C. sake and C. natalensis, but it is distinct from them on the basis of DNA relatedness, electrophoretic enzyme patterns and proton magnetic resonance (PMR) spectra of the cell wall mannans. These investigators noted that C. fragi differs from C. oleophila by its inability to utilize trehalose.

to ferment galactose and to grow in the presence of lOOppm cycloheximide. 64.101. Candida oregonensis Phaff & do CarmoSousa (1962) Synonym: Candida obtusa Dietrichson ex van Uden & H.R. Buckley var. oregonensis (Phaff & do Carmo-Sousa) Montrocher (1967)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0-3.5)x(2.55.0) ^m, single and in chains. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongate cells, often with dense verticils of ovoidal blastoconidia. Aerobic growth is white to cream-colored, butyrous, smooth, glistening and entire. Fermentation: Glucose Galactose Sucrose Maltose

s s

Lactose Rafifinose Trehalose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine

+ n n

Assimilation:

-

+ + + +

-

+

-

+

+

-

-/I -/I + +

-

+

-

+

-

+/

-

+ + + + 1

-

+ +

-

1

Additional assimilation tests and other g;roi characteristics:

V

-

+

-

+

-

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 30°C Growth at SS^'C

+

-

+

-/ +

-

L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 48.1, 48.0, type strain {T^: Meyer and Phaff 1972; 7;^: Nakase and Komagata 197If, respectively).

Origin of the strains studied: CBS 5036, insect frass; CBS 5623, alpechin. Type strain: CBS 5036.

535

64. Candida Berkhout / S.A. Meyer et al.

64.102. Candida ovalis Kumamoto & Yamamoto (Kumamoto et al. 1986) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, (2.5^.5)x(3.0^.5)|im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are not present. Aerobic growth is white to cream-colored, butyrous, moist, soft and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

+ + + + + + 1 + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1%) Cycloheximide Nitrite Growth at 3 5 ^ Cadaverine + Growth at 37*'C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Kumamoto et al. 1986). Mol% G + C: 35.8, CBS 7298 {T^ Kumamoto et al. 1986).

Origin of the strain studied: CBS 7298, soil, Japan. Type strain: CBS 7298. 64.103. Candida palmioleophila Nakase & M. Itoh (Nakase et al. 1988a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are primarily globose with some that are slightly ovoidal, (1.5-4.0)x(l.5-5.0)[im, and occur singly, in pairs, short chains and small clusters.

Fig. 246. C. palmioleophila, CBS 7418. After 3 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 |im.

A thin pellicle is present which eventually drops to the bottom of the tube (Fig. 246). Dalmau plate culture on corn meal agar: After 14 days at 25°C, primitive pseudohyphae consisting of short, branched chains of ovoidal cells are present. Aerobic growth is white, butyrous, smooth, soft and entire. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + + + 1 -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin 1 Biotin-free Propane 1,2 diol + Pyridoxine-free Butane 2,3 diol + 0.01% Cycloheximide Nitrite + Growth at 37T Cadaverine + Growth at 40T Creatinine ^ Utilization of D-glucosamine as c source of nitrogen.

+ + -

+ + + +

Vc. Descriptions of anamorphic ascomycetous genera and species

536

Co-Q: 9 (Nakase et al. 1988a). Mol% G + C: 39.4, 39.7, CBS 7418 {T^ and HPLC: Nakase et al. 1988a, respectively).

Origin of strain studied: CBS 7418, soil, Japan. Type strain: CBS 7418. Comments: Nakase et al. (1988a) pointed out that C palmioleophila has characteristics similar to C famata and C saitoana, but can be differentiated from them on the basis of its high maximum growth temperature. Furthermore, DNA reassociation studies support the separation of these species. Interestingly, these investigators found 40.3% DNA relatedness between C. palmioleophila and C parapsilosis, but also revealed that C palmioleophila lacks antigen 13 which is specific for antigenic Group IV of which C. parapsilosis is a member.

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate + D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at 35T Cadaverine + Growth at 3TC Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 41.5, CBS 8005 (7;, : Meyer, unpublished data).

+ + -

+ + + w -

64.104. Candida paludigena Golubev & Blagodatskaya (Golubev et al. 1981) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0-3.5)x(4.07.0) (im, single and in pairs (Fig. 247). Pseudohyphae may be present. Dalmau plate culture on corn meal agar: After 14 days at 25*'C, well-developed pseudohyphae and septate hyphae are present. Aerobic growth is white, butyrous, glistening, and smooth with a fringed border. Fermentation:

Glucose Galactose Sucrose Maltose

s/-

-

Lactose Raffinose Trehalose

-

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + +

-

-/I +

-

+ +

-

+

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1

Fig. 247. C. paludigena, CBS 8005. After 5 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 |im.

Origin of the strain studied: CBS 8005, high-moor peat near Moscow. Type strain: CBS 8005. Comments: Kurtzman and Robnett (1997) found C paludigena and C castrensis to differ by only two nucleotides in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific.

-

+

-

-/I

-

+ + +

-

+ + +

-

64.105. Candida parapsilosis (Ashford) Langeron & Talice (1932) Synonyms: Monilia onychophila Pollacci & Nannizzi (Marengo 1926) Monilia parapsilosis Ashford (1928) Mycocandida parapsilosis (Ashford) Dodge (1935) Mycotorula vesica Harrison (1928) Blastodendrion globosum Zach (Wolfram and Zach 1934a) Schizoblastosporion globosum (Zach) Dodge (1935) Blastodendrion gracile Zach (Wolfram and Zach 1934a) Schizoblastosporion gracile (Zach) Dodge (1935) Blastodendrion intestinale Mattlet var. epidermicum Ciferri & Alfonseca (1931) Castellania epidermica (Ciferri & Alfonseca) Dodge (1935) Mycotoruloides unguis (Emile-Weil & Gaudin) Langeron & Talice (1932)

64. Candida Berkhout / S.A. Meyer et al. Saccharomyces uercitillatus Dietrichson (1954) Saccharomyces vossii Dietrichson (1954) Zymopichia vossii (Dietrichson) Novak & Zsolt (1961) Candida parapsilosis (Ashford) Langeron & Talice var. intermedia van Rij & Verona (1949) Brettanomyces petrophilum Takeda, Iguchi, Tsuzuki & Nakano (1972) Torulopsis larvae Kawano, Kojima, Obosawa & Morinaga (1976) nom. inval. Candida osornensis C. Ramirez & A. Gonzalez (1984f)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (3.0^.0)x(5.08.0) (Jim, single and in pairs (Fig. 248). Cylindrical cells up to 20 |jim long, as well as pseudohyphae, may also be present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells with clusters or chains of blastoconidia. Aerobic growth is white, butyrous, soft, smooth and entire.

Additional assimilation tests and other characteristics:

537

growth

+ Ethylamine + 2-Keto-D-gluconate -/I D-Glucosamine (N)^ 5 -Keto-D-gluconate + n 50% Glucose Saccharate + 10% NaCl/5% glucose D-Glucuronate +/1 Starch formation Xylitol -/I Urease L-Arabinitol Biotin-free Arbutin + -/I Pyridoxine-free Propane 1,2 diol 0.01% Cycloheximide V Butane 2,3 diol 0.1% Cycloheximide Nitrite Cadaverine + Growth at 3 7 T + Creatinine V Growth at 40°C L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 40.0, CBS 604 {T^: Meyer and PhaflF 1969); 40.5, CBS 604 {T^: Meyer and Phaflf 1972); 40.8, CBS 604 {T^: Stenderup and Bak 1968); 40.5, CBS 6318 {T^: Meyer, unpubHshed data); 39.3^0.0, 6 strains {T^\ Nakase and Komagata 197If); 40.5-41.7, 8 strains (7;„: Su and Meyer 1991).

Origin of the strains studied: CBS 604, sprue, Puerto Rico; CBS 1954, olives, Italy; CBS 2194, nail (Blastodendrion globosum); CBS 2196, skin {Blastodendrion intestinale var. epidermicum); CBS 2197, bladder {Mycotorula vesica); CBS 2211, toe; CBS 2215, CBS 2216, pickled cucumbers; CBS 2315, nail (Monilia onychophila); CBS 2915 (Saccharomyces vossii)', CBS 2916, patient {Saccharomyces verticillatus), Norway; CBS 6318, CBS 8050, unknown; CBS 8181 (type of C osornensis), rotten tree trunk, Chile. Type strain: CBS 604. Fig. 248. C parapsilosis, CBS 604. After 5 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 [xm.

Fermentation: Glucose Galactose Sucrose Maltose

+ V

-/s -/s

Lactose Raffinose Trehalose

-/

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/1 + +

-

+

-

+

+ +

-

V

V

-

+ +

-

+/

-

+ + +

-

+/

-

+ +

-

+/

-

Comments: Candida osornensis demonstrated 100% DNA reassociation with the type strain of C parapsilosis (B. Roy and S.A. Meyer, unpublished data). Lin et al. (1995) showed that strains identified as C parapsilosis based on physiological and morphological characteristics fell into three groups. These groups were defined on the basis of electrophoretic profiles of several enzymes and nucleotide sequences of the internally transcribed spacer, ITSl, next to the 5.8S RNA gene. Two groups have been confirmed by DNA reassociation studies (B. Roy and Meyer, unpublished data). In earlier studies, Meyer and Phaff (1972) showed the lack of DNA relatedness between the type strains of C. parapsilosis and Lodderomyces elongisporus did not support the proposed anamorphic/teleomorphic relationship of these species. Then, Nakase et al. (1979) demonstrated two different forms of C parapsilosis with similar physiological and serological properties and nuclear magnetic resonance profiles of cell wall mannans. Strains designated C parapsilosis Form I were L-arabinose positive and included the type strain, whereas strains designated C. parapsilosis Form II were L-arabinose negative and considered imperfect forms of L. elongisporus. Later, Yamazaki and

538

Vc. Descriptions of anamorphic ascomycetous genera and species

Komagata (1982a) compared C parapsilosis Form I and Form II on the basis of electrophoretic patterns of ten enzymes and supported the conclusions of Nakase and coworkers. Hamajima et al. (1987) employed DNA base composition and DNA reassociation studies to show that the strains designated C parapsilosis Form II were, indeed, anascosporogenous strains of L. elongisporus. It is apparent that the criteria presently employed to identify strains of C parapsilosis are inadequate. The molecular studies being conducted in several laboratories around the world will help to define the 'C. parapsilosis complex' and provide the criteria necessary to identify the species.

64.106. Candida pararugosa Nakase, Komagata & Fukazawa (1978) Synonym: Cryptococcus aggregatus Anderson (1917)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are cylindrical, (1.53.0)X(6.0-23.0) |im, single, in pairs and short chains (Fig. 249). A white, creeping pellicle composed of tiny, spherical islands like styrofoam discs, covers the entire surface. After one month the pellicle is complete, folded, rough and thick. Dalmau plate culture on corn meal agar: After 14 days at 25°C, abundant pseudohyphae consist of long, branched chains of cylindrical cells. Aerobic growth is white, raised, and wrinkled to rough with a mycelial border. Fermentation: absent.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine + 5-Keto-D-gluconate Ethylamine + Saccharate n D-Glucosamine (N)^ D-Glucuronate 50% Glucose + 10% NaCl/5% glucose Xylitol L-Arabinitol Starch formation Arbutin Urease + Biotin-free Propane 1,2 diol -/ Butane 2,3 diol Pyridoxine-free + Nitrite 0.01% Cycloheximide -

Cadaverine + Growth at SV^'C + Creatinine Growth at 40"C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 48.3, AJ 4645 (CBS 1010) (T^ Nakase and Komagata 197If; Tn,: Nakase etal. 1978).

Origin of the strains studied: CBS 1010, from feces, received as Cryptococcus aggregatus; CBS 5849, gut of a gecko {Anatolis bartchi). Type strain: CBS 1010. Comments: The results here differ from the original description in the ability to assimilate glycerol, mannitol, D-glucitol, lactate and succinate. 64.107. Candida peltata (Yarrow) S.A. Meyer & Ahearn (1983)

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Fig. 249. C. pararugosa, CBS 1010. After 5 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 ^im.

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + -

+ + 1 + -

Synonyms: Torulopsis peltata Yarrow (1968) Selenotila peltata (Yarrow) Yarrow (1969b) Selenozyma peltata (Yarrow) Yarrow (von Arx et al. 1977)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to lunate, (2.03.5)X(3.0-5.0) |im, single and in pairs. A pellicle may be present. Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are not present. Aerobic growth is white to cream-colored, butyrous, and smooth with an entire margin. Fermentation: Glucose Galactose Sucrose Maltose

+ s -

Lactose Raffinose Trehalose

-

64. Candida Berkhout / S.A. Meyer et al.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/1

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + +/1 + +/1 + + + + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol + Pyridoxine-free Butane 2,3 diol + 0.1% Cycloheximide Nitrite Growth at 3 7 ^ Cadaverine + Growth at 40''C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strains studied: CBS 5564, non-mucoid variant; CBS 5576, from mastitis milk, UK. Type strain: CBS 5576. 64.108. Candida petrohuensis C. Ramirez & A. Gonzalez (1984h) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are subglobose to ovoidal.

539

(3.0-4.5)X(3.0-6.0) [im, single and in pairs (Fig. 250). After one month a ring and a thin pellicle may be present. Dalmau plate culture on corn meal agar: After 14 days at 25°C, short, dense chains of ovoidal cells are present. Aerobic growth is white to cream-colored, butyrous, smooth, soft and entire. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + +/1 + -/I -/I

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1 + + 1 1 + 1 -/I 1 + -

Additional assimilation tests and other growth characteristics: L-Lysine + 2-Keto-D-gluconate Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate 1 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.1% Cycloheximide + Nitrite Growth at 2 5 T + Cadaverine Growth at 3 0 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 46.1, CBS 8173 {T^: Tengku Zainal Mulok 1988).

Origin of the strain studied: CBS 8173, rotten wood, Chile. Type strain: CBS 8173. Comments: Kurtzman and Robnett (1997) found C petrohuensis, C. ancudensis and C. drimydis to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, thus indicating the three taxa to be conspecific. 64.109. Candida pignaliae (F.H. Jacob) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis pignaliae F.H. Jacob (1970)

Fig. 250. C. petrohuensis, CBS 8173. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 ^m.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25T, the cells are globose, (3.5-7.0) ^im, single, in pairs and small groups. Dalmau plate culture on corn meal agar: After

540

Vc. Descriptions of anamorphic ascomycetous genera and species

14 days at 25°C, pseudohyphae are not present. Aerobic growth is white to cream-colored, butyrous, smooth, glistening and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

+ -/I + + + -/I -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Arbutin Urease Propane 1,2 diol 1 Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.1% Cycloheximide Cadaverine Growth at 30°C Creatinine Growth at BS^C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (C.-F. Lee et al. 1994b). Mol% G + C: 42.7, CBS 6071 (BD: Meyer et al. 1984).

+ + -

+ + +

Fig. 251. C. pini, CBS 970. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 [im.

5.0) |im, single, in pairs and small groups (Fig. 251). Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. Aerobic growth is white to cream-colored, soft, mucoid and entire. Fermentation: Glucose Galactose Sucrose Maltose

s -

Lactose Raffinose Trehalose

-/s

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + +

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + -

Origin of the strain studied: CBS 6071, tanning fluid, Additional assimilation tests and other growth France. characteristics: Type strain: CBS 6071. Comments: The value 43.7 mol% G + C for this species reported by Stenderup et al. (1972) should have been 42.7. 64.110. Candida pint (Lodder & Kreger-van Rij) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Torulopsis pinus Lodder & Kreger-van Rij (1952) Paratorulopsis pinus (Lodder & Kreger-van Rij) Novak & Zsolt (1961)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose, (3.5-5.0)x(3.5-

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+ + -

+ +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 25°C Growth at WC

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Yamada and Kondo 1972a). Mol% G + C: 37.3, type strain {T^: Nakase and Komagata 1971d).

64. Candida Berkhout / S.A. Meyer et al.

Origin of the strain studied: CBS 970, water-logged heart of a pine tree. Type strain: CBS 970. 64.111. Candida populi Hagler, Mendon^a-Hagler & Phaff (1989) Growth in glucose-yeast extract-peptone broth: After 3 days at IS^'C, the cells are uniformly globose, (1.02.0) |im, and occur singly, budding in short chains and clusters. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. However, there may be some short chains of cells evident. Aerobic growth

Glucose Galactose Sucrose Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

_ +

-

+ + + +

-

+

-

+ + + + + 1

Lactose Raflfinose Trehalose

_ _ w/s

n

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to short ovoidal, (4.0-5.0)x(4.0-6.0)[xm, single and in pairs. A ring and a sediment are present. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells with verticils of subglobose to ovoidal blastoconidia. Aerobic growth is white to cream-colored, butyrous, dull, dry, mostly smooth with some wrinkled areas and fringed margins. Glucose Galactose Sucrose Maltose

+ + + s

Lactose Raflfinose Trehalose

+ + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

Assimilation: 7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+

-

+ + +/1 + +

-

+ +

-

+

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate

64.112. Candida pseudointermedia Nakase, Komagata & Fukazawa (1976)

Fermentation:

IS wiiiLC, u u i y i u u s ., M l l U U l l l , S U l l clllU CllUlC.

Fermentation:

541

Ethylamine D-Glucosamine (N)^

+

—

Saccharate D-Glucuronate Xylitol L-Arabinitol

n + +/1

50% Glucose 10% NaCl/5%) glucose Starch formation Urease

Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite

+ + + +

Biotin-free Pyridoxine-free 0.1%) Cycloheximide Growth at 30''C

n n + +

Cadaverine Creatinine L-Lysine

+

Growth at 35°C Growth at 2>TC

V

+

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+ + -/I -/I +

-

+ 1 +

n

-

+

-

+ 1 + + + + +

-

+ +

-

+

-

Additional assimilation tests and other g;roi characteristics:

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol

+ n n

L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

-

— + +

+

-

Ethylamine D-Glucosamine (N)^ 50%) Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1%) Cycloheximide Growth at 35°C Growth at 3 7 T

+

+

+ +

_ + 1 +

-

,^ Utilization of D-glucosamme as a source ot nitrogen. Co-Q: 8 (Hagler et al. 1989). MoI% G + C: 37.4-38.9, 6 strains (BD: Hagler et al. 1989).

^ Utilization of D-glucosamine as a source of nitroeen. Co-Q: Not determined. Mol% G + C: 44.9, CBS 6918 {T^ : Nakase et al. 1976).

Origin of the strains studied: CBS 7351, 7352, 7353, exudates of trees (Populus and Betula species). Type strain: CBS 7351.

Origin of the strain studied: CBS 6918, fish paste. Japan. Type strain: CBS 6918.

542

Vc. Descriptions of anamorphic ascomycetous genera and species

64.113. Candida pseudolambica M.Th. Smith, Foot & KuU (1989a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are mostly globose or slightly ovoidal, (3.0-5.0)x(3.0-5.0)(im, and occur singly. Some pairs and small clusters are present (Fig. 252). Dalmau plate culture on corn meal agar: After 14 days at 25°C, primitive pseudohyphae are present. Aerobic growth is white to cream-colored, butyrous, smooth and entire. Fermentation: Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Fig. 252. C. pseudolambica, CBS 2063. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 |im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/1

+/1

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ -

+ +

64.114. Candida psychrophila (S. Goto, Sugiyama & lizuka) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

+

Growth in glucose-yeast extract-peptone broth: After 3 days at IS'^C, the cells are spheroidal, (2.54.5) |im, single, in pairs or small clusters.

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 3 5 T Cadaverine + Growth at 3 7 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 30.8-31.4, 5 strains {T^: Smith etal. 1989a).

to be a new species after comparisons by DNA/DNA hybridization (Smith et al. 1989a). Two other species with similar mol% G + C, C. ethanolica (29.3) and C. rugopelliculosa (30.0), also showed no significant DNA relatedness with C. pseudolambica.

+ + +

Synonym: Torulopsis psychrophila S. Goto, Sugiyama & lizuka (1969)

Dalmau plate culture on corn meal agar: After 14 days at 15°C, pseudohyphae are absent. Aerobic growth is white, butyrous, smooth, soft and entire. Fermentation: absent. Assimilation:

+ + +

Origin of the strains studied: CBS 2058, feces; CBS 2063, silage, UK; CBS 2067 (ATCC 4673), CBS 4325 and CBS 4326, soil, Finland. Type strain: CBS 2063. Comments: The strains included in this species were formerly identified as C. lambica, but were determined

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + +/1 + + n -

543

64. Candida Berkhout / S.A. Meyer et al.

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 19°C Cadaverine Creatinine * Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 36.3, 35.9, CBS 5956 {T^\ Nakase and Komagata 1971d; T^\ Meyer etal. 1984).

Origin of the strain studied: CBS 5956, penguin dung, Antarctica. Type strain: CBS 5956. Comments: The only isolate of this species does not grow at temperatures above \TC. The tests here were performed at 15°C.

64.115. Candida pulcherrima (Linder) Windisch (1940) See Metschnikowia pulcherrima'. p. 264

64.116. Candida quercitrusa (van Uden & do Carmo-Sousa) S.A. Meyer & Phaff ex S.A. Meyer & Yarrow (1998) Synonyms: Candida parapsilosis (Ashford) Langeron & Talice var. querci van Uden & do Carmo-Sousa (1959) Candida quercitrusa (van Uden & do Carmo-Sousa) S.A. Meyer & Phaff (1972) nom. inval. Candida quercus (van Uden & do Carmo-Sousa) Montrocher & Claisse (1984) (as C. querci) [non Candida quercuum Nakase (1971b)]

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0-5.0)x(4.57.0) |im, single, in pairs and small groups. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells. Aerobic growth is white, butyrous, soft, and smooth to delicately wrinkled.

Fermentation: Glucose Galactose Sucrose Maltose

+ V

-/s -/s

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + V 1 +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-/I

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate + D-Glucosamine (N)^ 5-Keto-D-gluconate + 50% Saccharate n 50%) Glucose -/I 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol 1 Urease L-Arabinitol Biotin-free Arbutin Pyridoxine-free Propane 1,2 diol 0.01% Butane 2,3 diol 0.01% Cycloheximide -/I 0.1% Cycloheximide Nitrite Growth at 35T Cadaverine + Growth at 37T Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). MoI% G + C: 41.5, CBS 4412 {T^: Meyer and Phaff 1972); 39.5 {T^: Nakase and Komagata 197If); 40.0 {T^\ Su 1990).

Origin of the strain studied: CBS 4412, insect frass on an oak tree. Type strain: CBS 4412. Comments: Meyer and Phaff (1972) employed DNA hybridization to show that C. parapsilosis var. querci was distinct from C. parapsilosis and stated that it should be considered a separate species. However, they did not formally name it. Montrocher and Claisse (1984) used cytochrome absorption spectra and serological procedures to compare these two yeasts and came to the same conclusion. They proposed the name C. quercus (published as querci). However, this is a later homonym of C quercuum Nakase (1971b) and, therefore, invalid under Article 64.2 of the International Code of Botanical Nomenclature. In the previous edition of The Yeasts, A Taxonomic Study, the name C quercitrusa was used for this yeast (Meyer et al. 1984). This name was validated by Meyer and Yarrow (1998). 64.117. Candida quercuum Naliase (1971b) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to elongate, (1.5-2.5)X(5.0-9.0) [im, single and in pairs (Fig. 253).

Vc. Descriptions of anamorphic ascomycetous genera and species

544

Origin of the strain studied: CBS 6422, exudate of an oak tree. Type strain: CBS 6422. 64.118. Candida railenensis C. Ramirez & A. Gonzalez (1984c)

.plirp:: ;^:l/i

Synonym: Apiotrichum osvaldi C. Ramirez & A. Gonzalez (1984d)

Fig. 253. C quercuum, CBS 6422. After 3 days in glucose-ycast extractpeptone broth at 25*^0. Bar = 5 |im.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are spheroidal to ovoidal or cylindrical, (2.5-4.5) x (4.5-7.5) [im, single, in pairs and chains (Fig. 254). Pseudohyphae are present. A thin, waxy pellicle is evident. After 30 days a thick pellicle is present.

Dalmau plate culture on corn meal agar: After 7 days at 25*'C, pseudohyphae consist of branched chains of elongate cells with globose to ovoidal blastoconidia. Aerobic growth is white, butyrous, smooth, dull, dry and entire. Fermentation: Glucose Galactose Sucrose Maltose

w -

Lactose Raffinose Trehalose

+ + + + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

+ + + + + + + + + + -

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate L-Lysine 5 -Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine Growth at 35°C Creatinine Growth at 37"C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 38.3, CBS 6422 {T^: Nakase 1971b); 39.5, CBS 6422 {T^: Meyer, unpublished data).

Fig. 254. C. railenensis, CBS 8165. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 |im.

Dalmau plate culture on corn meal agar: After 7 days at 25°C, abundant pseudohyphae with branched chains of cells and ovoidal to elongated blastoconidia are present. True hyphae are also present. Aerobic growth is creamcolored, dull, lacy, and raised with a lobed margin. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+ + + + + + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + 1 +

s

64. Candida Berkhout / S.A. Meyer et al.

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol 1 Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at SOT Cadaverine + Growth at 3 5 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 42.0, CBS 8164; 41.5, CBS 8165 (7;^: Tengku Mulok 1988).

+ + +/s -/I + + +

Zainal

545

7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells with verticils of ovoidal blastoconidia. Aerobic growth is white and wrinkled with a fringed border. Fermentation: Glucose Galactose Sucrose Maltose

+ V +

Lactose Raffinose Trehalose

+ + V + + + + + + + V + V +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Origin of the strains studied: CBS 8164, rotten trunk of Nothofagus dombeyii; CBS 8165, rotten truck of Nothofagus obliqua, Chile. Type strain: CBS 8164. Comments: This species and its synonym were considered to be synonyms of C. oleophila (Barnett et al. 1990). However, DNA reassociation studies confirmed that they are not members of C oleophila. C. railenensis and Apiotrichum osvaldi are conspecific and showed no significant DNA relatedness with C oleophila. C. railenensis and its synonym also showed no significant DNA Additional assimilation tests and other growth relatedness with C. sake (Tengku Zainal Mulok 1988). characteristics: 64.119. Candida reukaufii (Griiss) Diddens & Lodder (1942) See Metschnikowia reukaufii: p. 265 64.120. Candida rhagii Jurzitza, Kiihlwein & Kreger-van Rij (1960) Synonym: Candida tropicalis (Castellani) Berkhout var. rhagii Diddens & Lodder (1942)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0^.0) x (4.06.0) |im, single and in pairs (Fig. 255). Dalmau plate culture on corn meal agar: After

2-Keto-D-gluconate L-Lysine 5-Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol +/1 Starch formation Arbutin + Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine Growth at 35''C Creatinine Growth at 2>TC ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 42.4, CBS 4237 {T^: Meyer and Phafif 1972).

Origin of the strains studied: CBS 618, CBS 4237, CBS 4284, from insects and their larvae. Type strain: CBS 4237. Comments: Kurtzman and Robnett (1997) found C rhagii and Pichia heimii to differ by only two nucleotides in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be either conspecific or sibling species.

Fig. 255. C. rhagii, CBS 4237. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 [im.

64.121. Candida rugopelliculosa Nakase (1971a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are mostly ovoidal to elongate, (2.8-5.6)x(5.6-11.2) (im, single, in pairs and short chains. Some spherical cells are present. A wrinkled, folded pellicle is present.

Vc. Descriptions of anamorphic ascomycetous genera and species

546

Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells with verticils of blastoconidia. Aerobic growth is white to off-white with raised, folded areas and a mycelial border. Fermentation: Glucose Galactose Sucrose Maltose

+ -

Lactose Raffinose Trehalose

Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of densely branched chains of elongate cells. Aerobic growth is off-white, wrinkled and fringed with mycelium. Fermentation: absent. Assimilation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are elongate, (1.52.5)X (5.0-11.0) [im, single and in pairs. Islets or a pellicle are present.

+ +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + +

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)' Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol ~ Urease Arbutin Biotin-free Propane 1,2 diol 1 Pyridoxine-free Butane 2,3 diol 0.01%) Cycloheximide Nitrite Growth at 37''C Cadaverine + Growth at 40''C Creatinine ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 30.0, CBS 6377 {T^ Nakase 1971a).

+ + +

-

1

-

+ +

-

+

-

Origin of the strain studied: CBS 6377, from soybean protein factory in Japan. Type strain: CBS 6377. 64.122. Candida rugosa (Anderson) Diddens & Lodder (1942) Synonyms: Monilia rugosa (Castellani) Castellani & Chalmers (1913) Mycoderma rugosa Anderson (1917) Mycotorula rugosa (Saito) Harrison (1928) 1 Candida rugosa (Anderson) Diddens & Lodder var. elegans Dietrichson (1954) lAzymocandida rugosa (Anderson) Novak & Zsolt (1961)

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v V -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/1 +/1

V

+/1 V

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol -/I Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol +/1 Pyridoxine-free Butane 2,3 diol + 0.01% Cycloheximide Nitrite Growth at 2>TC Cadaverine + Growth at 40°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 50.2-50.7, 4 strains {T^\ Nakase et al. 1978).

+ +

Origin of the strains studied: CBS 613, feces of man; CBS 2016, feces of cow; CBS 2274, unknown, from R. Ciferri; CBS 2275, CBS 2277, rancid butter; CBS 6314, unknown, from J.R van der Walt; CBS 7138, soil in the Netherlands. Type strain: CBS 613. 64.123. Candida saitoana Nakase & M. Suzuki (1985b) Synonyms: Torula Candida Saito (1922) Torulopsis Candida (Saito) Lodder (1934) Cryptococcus candidum (Saito) Skinner (1950) Torulopsis Candida (Saito) Lodder var. marina Kawano, Kojima, Ohosawa & Morinaga (1976)

64. Candida Berkhout / S.A. Meyer et al.

547

Origin of strains studied: Japan; CBS 8046, fish food. Type strain: CBS 940.

Fig. 256. C. saitoana, CBS 940. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 |im.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (5.0-8.0)x(5.0-10.0) [Jim, single and in pairs (Fig. 256). Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are either absent or primitive pseudohyphae are present. Aerobic growth is off-white, smooth, shiny and entire. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + v + + v + v + v v v

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Comments: This species is similar to C.famata, but differs from it by growing on propane 1,2 diol. Nakase and Suzuki (1985b) distinguished C saitoana from C.famata and C naganishii (teleomorph of Debaryomyces nepalensis) by proton magnetic resonance spectra of mannans, serological characterization and electrophoretic mobilities of glucose-6-phosphodehydrogenase. As pointed out by these authors, the name Torula Candida Saito 1922 has priority. However, it cannot be used because the combination Candida Candida is a tautonym. Therefore, they chose the name Candida saitoana, in honor of Dr. Saito who described Torula Candida. Suzuki and Nakase (1993) described a new species, C pseudoglaebosa, which resembles C saitoana and C. glaebosa. See comments for C. glaebosa. MAIA. Candida sake (Saito & Oda) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) Synonyms: Eutorulopsis sake Saito & Oda (1934) Torulopsis sake (Saito & Oda) Lodder & Kreger-van Rij (1952) Candida sake (Saito & Oda) van Uden & H.R. Buckley (1970) nom. inval. Torula lambica Kufferath (1925) Mycotorula lambica Harrison (1928) Candida tropicalis (Castellani) Berkhout var. lambica (Harrison) Diddens & Lodder (1942) Candida uanriji Capriotti (1958f) Candida salmonicola Komagata & Nakase (1965) Candida australis S. Goto, Sugiyama & lizuka (1969)

+ + w v

Additional assimilation tests and other growth characteristics:

Ethylamine 2-Keto-D-gluconate + D-Glucosamine (N)^ 5-Keto-D-gluconate n 50% Glucose Saccharate n 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol + Urease L-Arabinitol v Biotin-free Arbutin + Pyridoxine-free Propane 1,2 diol + 0.01% Cycloheximide Butane 2,3 diol + 0.1%Cycloheximide Nitrite v Growth at 35''C Cadaverine + Growth at 37T Creatinine Growth at 40*'C L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 {T^\ Nakase and Suzuki 1985b). Mol% G + C: 36.3-37.5, 6 strains (Nakase and Suzuki 1985b).

CBS 940, atmosphere,

+ v 1 v + + -/I v v v

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are spheroidal, ovoidal, elongate or cylindrical, (2.5-5.0)x(3.0-6.0)fim, and occur singly, in pairs, short chains and small clusters (Fig. 257). Pseudohyphae may be present. A ring, islets and a thin pellicle may be formed. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae may consist merely of a few short chains of cells or of long, branched chains of cylindrical cells with well-differentiated blastoconidia. Aerobic growth varies from smooth to lacy and wrinkled, white to off-white, creamy and soft. The margin may be entire or irregular. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Vc. Descriptions of anamorphic ascomycetous genera and species

548

CBS 5740, soil; CBS 5957, water, Antarctica; CBS 6716, CBS 6717, CBS 6718, water, Chesapeake Bay, U.S.A. Type strain: CBS 159.

Fig. 257. C. sake, CBS 159. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 ^m.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + v + + + v v

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

v + + v + + v v v v + v v v

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+ v n V v v + +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide Growth at 2 5 T Growth at 30°C Growth at 3 5 T

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C; 37.8^1.0, 10 strains {T^: Meyer et al. 1975); 39.3, CBS 159; 39.3, CBS 617 {T^: Kaneko et al. 1977); 40.1, CBS 159; 39.7, JMC 1595 (CBS 5690) {T^: Suzuki and Nakase 1988b).

Origin of the strains studied: CBS 159, sakemoto; CBS 617, Iambic beer (type strain of Torula lambica); CBS 1939, beer conduit in brewery, Sweden; CBS 2282, CBS 2283, egg yolk; CBS 2920 (type strain of C uanrijiae), CBS 2921, soil; CBS 5093, grape juice; CBS 5690, frozen salmon (type strain of C salmonicola);

Comments: Meyer and Phaff (1972) reported a high degree of DNA relatedness between C sake and C salmonicola type strains. Suzuki and Nakase (1988b) obtained similar results. Also, DNA reassociation studies confirmed the identity of CBS 617, CBS 2920, CBS 6716 and CBS 6717 as C sake (Meyer et al. 1975). This study, as well as another study (Kaneko et al. 1977), showed the lack of significant DNA relatedness between C. sake, C. maltosa and C tropicalis. Fukazawa et al. (1975) studied fifteen strains of C sake on the basis of their serological properties and proton magnetic resonance spectra and found that the strains could be divided into four groups. Group I included the type strains of C sake, C. tropicalis var. lambica, C. salmonicola and C uanrijiae. Group II was represented by the type strains of C. maltosa, C. cloacae and C. subtropicalis. The type strains of C. oleophila and C natalensis were members of Group III and Group IV, respectively. Montrocher (1980) found similar results with an immunoelectrophoretic technique. Both of these investigations concur with the DNA studies. The degree of variability exhibited by the strains included in C sake is indicative that heterogeneity still exists and additional molecular studies are needed to determine the identity of these strains. A new species, C. fragi, isolated from a fermenting strawberry, has physiological properties similar to C sake, as well as C. oleophila and C. natalensis, but it is distinct from them on the basis of DNA relatedness, electrophoretic enzyme patterns and proton magnetic resonance spectra of the cell wall mannans (Suzuki et al. 1991). Kurtzman and Robnett (1997) found C sake and C. austromarina to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. 64.125. Candida salmanticensis (Santa Maria) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) Synonyms: Torulopsis salmanticensis Santa Maria (1963a) Candida salmanticensis (Santa Maria) van Uden & H.R. Buckley (1970) nom. inval.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (3.0-5.0)X(4.0-8.0) |im, and occur singly, in pairs and in clusters (Fig. 258). Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of chains of cylindrical cells with verticils of ovoidal blastoconidia. Aerobic growth is white to cream-colored, dull, and smooth with an entire border.

64. Candida Berkhout / S.A. Meyer et al.

549

64.126. Candida santamariae Montrocher (1967) Synonym: Candida krusei (Castellani) Berkhout var. saccharicola Santa Maria (1959b)

Fig. 258. C salmanticensis, CBS 5121. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 [im.

Growth in glucose-yeast extract-peptone broth: After 3 days at IS^'C, the cells are ovoidal to elongate, (3.5-7.0)x(6.5-12.0)|im. Some single and budding cells are evident, but most of the growth is pseudomycelial. An incomplete pellicle is present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of extensively branched chains of cylindrical cells, sometimes with blastoconidia singly or in short chains. Aerobic growth is off-white to beige, creamy, smooth to irregular, soft, dull, with a mycelial border. Fermentation:

Fermentation: Glucose Galactose Sucrose Maltose

+ s + +

Lactose Raffinose Trehalose

+ + + + + + + -/I + + + + + + +

+ -

Lactose Raffinose Trehalose

+

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + v + + -

Assimilation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Glucose Galactose Sucrose Maltose

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaUcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate + D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5%) glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol + Pyridoxine-free Butane 2,3 diol + 0.1%) Cycloheximide Nitrite Growth at WC Cadaverine + Growth at 35"C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 45.5, CBS 5121 (BD: Meyer et al. 1984).

Origin of the strain studied: CBS 5121, alpechin (residue from preparation of olive oil). Type strain: CBS 5121.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + L-Lysine + 5 -Keto-D-gluconate 1 Ethylamine + Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol + 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin + Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide + Cadaverine + Growth at WC + Creatinine Growth at 35°C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 36.3, 38.8, 37.3, CBS 4515 {T^: Nakase and Komagata 197If; Meyer et al. 1984; Meyer, unpublished data; respectively).

Origin of strains studied: CBS 4515, sugar, Spain. Type strain: CBS 4515. Comments: In the original description of C. santamariae (Montrocher 1967), sucrose utilization and galactose

550

Vc. Descriptions of anamorphic ascomycetous genera and species

fermentation were recorded as positive. Van Uden and Buckley (1970) determined that these results were negative and attributed the difference to the techniques Montrocher used, which were test periods of up to three months. Also, a strain designated as C. santamariae var. membranifaciens Montrocher (1967) (isolated from an insect, Hymenochaete rubiginosa, in France, CBS 5838) was originally described as differing from the species in sucrose utilization, galactose fermentation and pellicle formation. Without studying this strain, van Uden and Buckley questioned its status as a variety since the type strain of C. santamariae failed to utilize sucrose and failed to ferment galactose. Meyer et al. (1984) noted that the mol% G + C was significantly higher (46%) for the varietal strain and stated that more studies needed to be done to identify this strain. (The reported value of 46% was an error. It should have been 44.6%). This was the value reported by Stenderup et al. 1972.) Nevertheless, this value is still significantly higher than that of the C. santamariae type strain. Other data (Meyer, unpubHshed data) places the mol%o G + C at 37.3-38.5, based on two T^ determinations. These GC values are closer to that of the type strain of C santamariae. DNA reassociation studies will resolve the relationship of these two strains. Since the taxonomic position of C santamariae var. membranifaciens remains uncertain, it is not included as a variety of the species at this time. Kurtzman and Robnett (1997) found C beechii and C santamariae to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. 64.127. Candida santjacobensis C. Ramirez & A. Gonzalez (19841) Growth In glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.0-3.5)X(2.0-5.0) |im, single and in pairs (Fig. 259). Dalmau plate culture on corn meal agar: After 14 days at 25°C, a few, short pseudohyphae are formed outside the coverslip. Aerobic growth is creamy, off-white, soft and entire.

Fig. 259. C. santjacobensis, CBS 8183. After 5 days in glucose-yeast extract-peptone broth at 2 5 ^ . Bar = 5 |im.

Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s s

+ + + + + + +

-

+ + +

-

+ + + + -/I +

Lactose Raflfinose Trehalose

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

s

-

+ + + +

-

1 1 + + +

-

+ + +

Additional assimilation tests and other g;ro\^ characteristics: 2-Keto-D-gluconate + L-Lysine 5 -Keto-D-gluconate n Ethylamine D-Glucosamine (N)^ Saccharate D-Glucuronate + 50% Glucose 10% NaCl/5% glucose Xylitol 1 Starch formation L-Arabinitol 1 Arbutin + Urease Propane 1,2 diol Biotin-free Pyridoxine-free Butane 2,3 diol Nitrite 0.1% Cycloheximide + Growth at 30T Cadaverine Growth at 35°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 48.5, type strain (T^: Meyer, unpublished data).

+ + +

-

1 + + w/-

-

Origin of the strain studied: CBS 8183, rotten wood, Chile. Type strain: CBS 8183. 64.128. Candida savonica Sonck (1974) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, cells have various shapes, mostly ovoidal or ellipsoidal and cylindroidal, (2.8-8.4)x(5.611.2)|im, and occur singly, in pairs and in short chains. After one month a thick sediment is evident. The sediment appears clumpy, but on shaking becomes homogeneous. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of extensively branched chains of elongate cells with single or short chains of blastoconidia. Aerobic growth is off-white, smooth, butyrous, flat and exhibits a mycelial border. Fermentation: Glucose Galactose Sucrose Maltose

+ s -

Lactose Raffinose Trehalose

s

64. Candida Berkhout / S.A. Meyer et al.

Assimilation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

1

A/^-Acetyl-D-glucosamine +/1 Methanol Ethanol + Glycerol + Erythritol Ribitol + Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside Salicin + D-Gluconate DL-Lactate Succinate + Citrate + Inositol Hexadecane Nitrate Vitamin-free 1

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at 30^C Cadaverine + Growth at 35°C Creatinine ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 48.0, CBS 6563 {T^ : Meyer et al. 1984).

+ + n + 1 1 + + w

Origin of the strain studied: CBS 6563, birch log, Finland. Type strain: CBS 6563. 64.129. Candida schatavii (Kockova-Kratochvilova & Ondrusova) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis schatavii Kockova-Kratochvilova & Ondrusova (1971)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to elongate, (2.9-5.8)x(3.6-7.2) |Jim, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells with a few ovoidal blastoconidia. Aerobic growth is white to cream-colored, smooth, moist and glistening, and has a fringed margin. Fermentation: Glucose Galactose Sucrose Maltose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+

-

1

-

-/I +

-

1

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

-

+ +

-

+

-

+ +

-

+/

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Ethylamine + + n 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate n 50% Glucose -/I D-Glucuronate 10% NaCl/5% glucose 1 Starch formation Xylitol Urease L-Arabinitol Arbutin Biotin-free + Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide + Nitrite Growth at 35T + + Growth at 37°C w/Cadaverine Growth at 40''C Creatinine + L-Lysine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 44.6, 43.7, CBS 6452 {T^\ Meyer et al. 1984; T^::Me unpublished data, respectively).

Origin of the strain studied: CBS 6452, pileus of a fungus (Fomitopsis pinicola). Type strain: CBS 6452. 64.130. Candida sequanensis Saez & Rodrigues de Miranda (1984) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoidal, (2.57.5) jim, single and in pairs (Fig. 260). Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. Aerobic growth is white, flat and glossy, with a lobate margin. Fermentation:

Lactose Raffinose Trehalose

551

Glucose Galactose Sucrose Maltose

+ s

-

Lactose Raffinose Trehalose

Fc. Descriptions of anamorphic ascomycetous genera and species

552

Msii

sTj^

Candida shehatae var, insectosa Kurtzman (1990b) Candida shehatae var. lignosa Kurtzman (1990b) -f

ififcis-

\

Growth in glucose-yeast extract-peptone broth: After 3 days at IS^'C, the cells are globose to ovoidal, (2.04.5)x(3.5-6.0)(im, and occur singly, in pairs and short chains (Fig. 261). Pseudohyphae are also present.

Fig. 260. C. sequanensis, CBS 8118. After 3 days in glucose-yeast extract-peptone broth at 25''C. Bar = 5 fxm.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + +

-

1 + +

-

+

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1

-

+ + + +

-

+ +

-

+ 1

-

+ +

-

1

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + L-Lysine + 5 -Keto-D-gluconate n Ethylamine + Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose + Xylitol + 10% NaCl/5% glucose + L-Arabinitol + Starch formation Arbutin + Urease Biotin-free Propane 1,2 diol + Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide + Growth at 2 5 T + Cadaverine Creatinine Growth at WC ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.6, type strain {T^\ Saez and Rodrigues de Miranda 1984).

Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consist of branched chains of elongate cells with globose to ovoidal blastoconidia. Aerobic growth is white to cream-colored, glistening, and smooth with a reticulated margin. Fermentation: Glucose Galactose Sucrose Maltose

+ +

_

Lactose Raffinose Trehalose

_ _

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

+

+/s

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ + + + -/I

-

-/I + + + V V

+

_ V

-

+ + V

+

-

+ + + + V

+ +

_ +

_ _

^•^" -&^«.>^wM'^^r / j ^ ' ' J

Origin of the strain studied: CBS 8118, oats. Type strain: CBS 8118. 64.131. Candida shehatae H.R. Buckley & van Uden (1967) This species has three varieties: Candida shehatae H.R. Buckley & van Uden var. shehatae (1990)

Fig. 261. C. shehatae var. shehatae, CBS 7261. After 3 days in glucoseyeast extract-peptone broth at 25°C. B a r = 5 ^im.

64. Candida Berkhout / S.A. Meyer et al.

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate n 50% Glucose D-Glucuronate 10% NaCl/5% glucose V Xylitol +/1 Starch formation L-Arabinitol -/I Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide + Nitrite 0.1% Cycloheximide V Cadaverine + Growth at 30"C + Creatinine Growth at 35T L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 41.2, one strain (T^: Nakase and Komagata 1971f); 41.2, one strain (T^: Vaughan-Martini 1984); 41.2^3.4,4 strains {T^: Tengku Zainal Mulok 1988); 43.5^3.7, 3 strains (BD: Kurtzman 1990b).

553

var. lignosa because the tests are terminated after 3 weeks. If they were allowed to run 4 weeks, latent or negative reactions were noted. 64.132. Candida silvae Vidal-Leiria & van Uden (1963) Growth in glucose-yeast extract-peptone broth: After 3 days at 25^C, the cells are ovoidal, (2.0-4.0)x(3.06.0) |Lim, single and in pairs (Fig. 262). Islets and a ring may be present. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of elongate cells with verticils of ovoid blastoconidia. Aerobic growth is white, butyrous, soft, mostly smooth, somewhat glistening and entire.

Supplementary descriptions of C shehatae varieties: Variety insectosa: L-sorbose, -; L-arabinose, -; erythritol, -; L-arabinitol, -; gelatin liquefaction, w; 0.1% cycloheximide, +; mol% G + C: 44.4, 44.6, 2 strains (Kurtzman 1990b). Variety lignosa: L-sorbose, +; L-arabinose, v; galactitol, v; D-gluconate, -; DL-lactate, w; L-arabinitol, -; 0.1% cycloheximide, +; mol% G + C: 44.1, type strain (Kurtzman 1990b). Origin of the strains belonging to the variety shehatae: CBS 5712, rose-hip, Canada; CBS 5813, dead insect-invaded pine tree; CBS 7261, CBS 7263, forest soil, South Africa; CBS 2779, soil. South Africa. Type strain: CBS 5813.

Fig. 262. C. siluae, CBS 5498. After 3 days in glucose-yeast extractpeptone broth at 25°C. Bar = 5 |im.

Origin of the strains belonging to the variety insectosa: CBS 4286, an insect, Leptura maculicornis; Fermentation: Glucose CBS 4287, an insect, Leptura cerambyciformis. Galactose Type strain: CBS 4286. Sucrose Origin of the strain belonging to the variety lignosa: CBS 4705, wood. Type strain: CBS 4705. Comments: Vaughan-Martini (1984) showed by DNA reassociation that C shehatae was not the anamorph of Pichia stipitis. This was confirmed by Tengku Zainal Mulok (1988) and by Kurtzman (1990b). Kurtzman's studies not only included DNA reassociation, but ribosomal RNA sequence comparisons. He also found that the strains of C. shehatae formed three DNA groups with about 50%) DNA reassociation between members of the different groups. He designated three varieties, C shehatae var. shehatae, var. insectosa, and var. lignosa, and found that the physiological properties that separate these varieties are the utilization of galactitol and lactate by var. lignosa and the weak liquefaction of gelatin by var. insectosa. Our results were variable for the utilization of galactitol by

Maltose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

s

+

V

-

Lactose Raffinose Trehalose

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +/1

-

+/1

-

+ +

-

-/I

V

+ V

-

Vc. Descriptions of anamorphic ascomycetous genera and species

554

Additional assimilation tests and other growth characteristics: + 2-Keto-D-gluconate L-Lysine -

Ethylamine + 5-Keto-D-gluconate n n Saccharate D-Glucosamine (N)' 50% Glucose D-Glucuronate _ _ Xylitol _ 10% NaCl/5% glucose _ Starch formation L-Arabinitol _ _ Arbutin Urease _ _ Biotin-free +/1 Propane 1,2 diol -/I Butane 2,3 diol Pyridoxine-free 0.01% Cycloheximide Nitrite + Growth at 2>TC V Cadaverine Growth at 40°C Creatinine _ ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Suzuki et al. 1994). Mol% G + C: 39.5, CBS 5498 {T^: Suzuki etal. 1994); 44.0,CBS 5497 (BD: Meyer etal. 1984).

Origin of the strains studied: CBS 988, yeast cake; CBS 1520, vagina; CBS 2832, sputum; CBS 5497, CBS 5498, horse intestine. Type strain: CBS 5498. Comments: Suzuki et al. (1994) described a new species, C stellimalicola, that resembles C silvae, C. diversa and C karawaiewii in physiological and morphological properties. C stellimalicola is differentiated from C silvae on the basis of a vitamin requirement. See Comments for C diversa for more information.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + 1 + + + +

-

+ + +

-

+ + 1 + +

-

7^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ + + +

-

+ + + + +

-

+ +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine + 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine

n n

-

+ + +

-

+

-

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide Growth at 37T Growth at 40°C

+

-

+

-/ +

-

+

-

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 40.5, 41.7, CBS 6274 {T^ van der Walt et al. 1971a; BD: Meyer et al. 1984, respectively).

64.133. Candida silvanorum van der Walt, van der Klift & D.B. Scott (van der Walt et al. 1971a)

Origin of the strain studied: CBS 6274, beetle-infested tree. South Africa. Type strain: CBS 6274.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.0-3.5)X(2.0-4.0) |im, single, in pairs, small chains and groups.

64.134. Candida silvatica (van der Walt, van der Klift & D.B. Scott) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Dalmau plate culture on corn meal agar: After 7 days at 25°C, well-developed pseudohyphae consist of long chains of slender elongate cells with verticils of usually triangular blastoconidia. Aerobic growth is white to cream-colored, butyrous with a raised, wrinkled central area and an entire or fringed margin. Fermentation:

Glucose Galactose Sucrose Maltose

+ s s s

Lactose Raffinose Trehalose

Synonym: Torulopsis silvatica van der Walt, van der Klift & D.B. Scott (1971b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, (2.0^.0) ^im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. Aerobic growth is white to slightly cream-colored, butyrous, smooth and entire. Fermentation: absent.

64. Candida Berkhout / S.A. Meyer et al.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

1

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+ +

-

+ +

-

n

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine + -

n Ethylamine 5-Keto-D-gluconate Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose Starch formation L-Arabinitol Arbutin -/I Urease Propane 1,2 diol Biotin-free Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Cadaverine + Growth at 37T Creatinine Growth at 40"C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 55.6, CBS 6277 {T^ : Meyer et al. 1984).

+

-

n

-

+

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflhnose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

555

+ +

-

+ + + +

-

+ + +

-

+ + + + +

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ + + +

-

+ + + + 1 + + +

-

+

Additional assimilation tests and other g;roi characteristics: 2-Keto-D-gluconate L-Lysine + -

5 -Keto-D-gluconate n Ethylamine n Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol + 10% NaCl/5% glucose + Starch formation L-Arabinitol Arbutin + Urease Propane 1,2 diol + Biotin-free Butane 2,3 diol + Pyridoxine-free Nitrite 0.01% Cycloheximide Cadaverine + Growth at 2>TC Growth at WC Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 36.6, CBS 6269 {T^ : Meyer et al. 1984).

+

-

+ +

-

+ +

-

+

-

Origin of the strain studied: CBS 6277, beetle-infested tree, South Africa. Type strain: CBS 6277.

Origin of the strain studied: CBS 6269, beetle-infested tree. South Africa. Type strain: CBS 6269.

64.135. Candida silvicultrix van der Walt, D.B. Scott & van der Klift (1972)

64.136. Candida solani Lodder & Kreger-van Rij (1952)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to short-ovoidal, (2.5-6.0) X (4.5-7.0) |im, single and in pairs.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, sometimes slightly elongated, (3.5-5.5)x(6.0-11.0) |im, single, in pairs and short chains (Fig. 263).

Dalmau plate culture on corn meal agar: After 7 days at 25°C, abundant development of pseudohyphae is present. Pseudohyphae consist of branched chains of elongate cells with dense verticils of blastoconidia. Aerobic growth is off-white, butyrous, smooth, and shiny with both an entire and a fringed border.

Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consist of branched chains of cylindrical cells with ovoidal blastoconidia. Aerobic growth is off-white, butyrous, smooth, soft, flat, and dull with a slightly irregular edge.

Fermentation:

Fermentation:

Glucose Galactose Sucrose Maltose

+ + + s

Lactose Raffinose Trehalose

Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

556

Vc. Descriptions ofanamorphic ascomycetous genera and species

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are globose to ovoidal, (2.55.0)X(4.0-6.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. However, there are small clusters of chained cells. Aerobic growth is offwhite, butyrous, soft, smooth, shiny and entire to slightly lobed. Fermentation:

Fig. 263. C. solani, CBS 1908. After 3 days in glucose-yeast extractpeptone broth at 25''C. Bar = 5 jim.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v + + + + + + -

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + v + + + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + 5-Keto-D-gluconate Ethylamine D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol + Pyridoxine-free Butane 2,3 diol + 0.01% Cycloheximide Nitrite Cadaverine + Growth at 30°C Growth at 3 5 ^ Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (Yamada and Kondo 1972a). Mol% G + C: 41.9, CBS 1908 {T^: Meyer and Phaff 1972).

+ +

-

+

-

Origin of the strain studied: CBS 1908, potato-starch mill. Type strain: CBS 1908. 64.137. Candida sonorensis (M.W. Miller, Phaff, Miranda, Heed & Starmer) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis sonorensis M.W. Miller, Phaff, Miranda, Heed & Starmer (1976a)

Glucose Galactose Sucrose Maltose

+ -

Lactose Raflfinose Trehalose

+ + + + v -

A'^-Acetyl-D-glucosamine Methanol + Ethanol + Glycerol 1 Erythritol Ribitol + Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside Salicin + D-Gluconate DL-Lactate 1 Succinate + Citrate Inositol Hexadecane Nitrate Vitamin-free -

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin + Biotin-free Propane 1,2 diol -/I Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at 37''C Cadaverine + Growth at 40°C Creatinine ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (J.-D. Lee and Komagata 1980a). Mol% G + C: 36.0-36.1, 2 strains (BD: Miller et al. 1976a).

+ + -

+ + + +

Origin of the strains studied: CBS 6792, CBS 6793, cacti, Mexico and USA. Type strain: CBS 6792. 64.138. Candida sophiae-reginae C. Ramirez & A. Gonzalez (1984g) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are long-ovoidal, ellipsoidal or cylindrical, (2.0-4.5) x (6.0-10.0) |im, single, in pairs and short chains (Fig. 264).

557

64. Candida Berkhout / S.A. Meyer et al. Co-Q: Not determined. Mol% G + C: 39.3, CBS 8175 {T^: Tengku Zainal Mulok 1988).

Origin of the strain studied: CBS 8175, rotten wood, Chile. Type strain: CBS 8175. 64.139. Candida sorbophila (Nakase) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis sorbophila Nakase (1975)

Fig. 264. C. sophiae-reginae, CBS 8175. After 3 days in glucose-yeast extract-peptone broth at 25^0. Bar = 5 |im.

Dalmau plate culture on corn meal agar: After 7 days at 25°C, well-developed pseudohyphae with branched chains of cells possessing clusters of oval blastoconidia are present. Aerobic growth is white, butyrous, and glistening. The margin is entire to irregular. Fermentation: Glucose Galactose Sucrose Maltose

+ s

-

Lactose Raflhnose Trehalose

-

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoidal, (2.03.5)x(3.0-4.0)|im, single and in pairs (Fig. 265). Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent or consist of short, branched chains of ovoid cells. Aerobic growth is white, butyrous, smooth, glistening and entire.

fS r^. %^f%afeii!

s

1

+

-

+

-

1

-

i^y0^s

•^•; • ; , , : , • •

"'

^i

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + +

liiliiip

'

uliiiiiif ^: jiiili;: oi^

/^^^Pf'vjSHEflf

-

M

••©• •

MM :,,:mgM •i''"rl¥f....,0^ ;-;; •^4*#^' ^^•&m

:M:i^ •s •;.;:;!

'•

i ^ r'U^

WWi

Kmm mm .s-'M.

V d i;

M

^

#" :|

Jiliili ^:.mmm m:MMM: r mtim m-^.^i LJ^"''^^^^mMg;M-n iNT •-, • • • t ^ ~ ' * - p * ^ ' ^ f 5 m^^^ ' *^

^mm ''::mMi,.m.^ JT

+ + 1

Fig. 265. C. sorbophilcI, CBS 6739. After 4 days in elucose-y extract-peptone broth at 25''C. Bar = 5nm.

+ +

Fermentation: abs;ent.

_

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + L-Lysine n 5-Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose + Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.01% Cycloheximide + Cadaverine Growth at 2 5 ^ Creatinine Growth at 30°C ^ Utilization of D-glucosamine as a source of nitrogen.

^ '^^^.^^

^C^ ^^^^M^^m

w

iim + + + + +

/

Wk0f^^-':W^^''^0^., Wm§!&Miiii'liii f»j:fg^i:mWr' iS'-'^''[ ^1 ' ;:|p:| 0mfW:^^^^^^^

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose 'L-Rhamnose -D-Glucosamine

r

+ +

-

+

-

+

-

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D - ( jlucosamine

+ + +

_ 1 V

-

jV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+/1 1

_ + +

-

+

-

+/1

-

558

Vc. Descriptions of anamorphic ascomycetous genera and species

Additional assimilation tests and other growth characteristics:

Ethylamine 2-Keto-D-gluconate D-Glucosamine (N)^ 5-Keto-D-gluconate 50% Glucose Saccharate n 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol 1 Urease L-Arabinitol Biotin-free Arbutin Pyridoxine-free Propane 1,2 diol 0.1%) Cycloheximide Butane 2,3 diol Growth at 3 5 T Nitrite Growth at 2>TC Cadaverine + Growth at 4 0 T Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 50.0, CBS 6739 {T^ : Nakase 1975).

+ -

+ -/I + + v

Origin of the strains studied: CBS 6739, ionexchange resin in a guanine monophosphate factory, Japan; CBS 7062, unknown, Switerland; CBS 7266, soil. South Africa. Type strain: CBS 6739.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to long-ovoidal, (3.0-6.0)X(4.0-8.4) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of branched chains of ovoidal cells with clusters of blastoconidia. Aerobic growth is off-white, butyrous, smooth, and soft with an entire to an irregular margin. Fermentation: s -

Lactose Raffinose Trehalose

+ + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Citrate Inositol Hexadecane Nitrate Vitamin-free

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide Growth at 3 5 T Growth at 2>TC Growth at 40°C

+ + +

+ + V

1

-

+

-

+ V

-

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 39.8, 39.9, 2 strains {T^: Nakase 1971c); 40.7, CBS 2120, CBS 2121 ( r ^ : Meyer, unpublished data).

Origin of the strains studied: CBS 2120, fermenting cacao; CBS 2121, palm wine; CBS 6378, pineapple; CBS 8042, Euphorbia species. Type strain: CBS 6378. 64.141. Candida spandovensis (Henninger & Windisch) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

64.140. Candida sorboxylosa Nakase (1971c)

Glucose Galactose Sucrose Maltose

Additional assimilation tests and other growth characteristics:

Synonym: Torulopsis spandovensis Henninger & Windisch (1976b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to short-ovoidal, (2.5-3.5)x(3.0-4.5)|im, single and in pairs (Fig. 266). Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent or short chains of budding cells are present. Aerobic growth is white, butyrous, shiny, convex and entire. ]Fermentation (alucose (jralactose <Sucrose ]Vlaltose

-

+ +

Lactose Raffinose Trehalose

>i^^ft~^^^<^^^^H

illllliH^^^

;

fzim^i^^^-'^^

,:;;:;• ::;:;;:;::::P?

:;:pC'^^'

-^^^P^"^•>-'ii'-:i^^

•••^^

: ^ ^ W

••

:

1P»5-i:-

||rf^.,::::::>:r:.:fil

11 ^

+ + +

::;;:-:*!:

1 1

MM::\m:--^--$\ • • : • • •

i,...^PI 1'^' mMMM^:0m^

^^^^^^^H

'••

]Fig. 266. C. spaUi

-

(extract-peptone

br

f

0 - ' " ^ - ^ " '

64. Candida Berkhout / S.A. Meyer et al.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Assimilation: + + + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + 1 + 1 -

Additional assimilation tests and other growth characteristics:

L-Lysine 2-Keto-D-gluconate v Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol v Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 30"C Cadaverine + Growth at 35T Creatinine ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 52.7, CBS 6875 {T^ : Meyer et al. 1984).

+ + + 1 + +

Origin of the strains studied: CBS 5511, CBS 6875, beer, Germany. Type strain: CBS 6875. 64.142. Candida stellata (Kroemer & Krumbholz) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonyms: Saccharomyces stellatus Kroemer & Krumbholz (Krumbholz 1931) Torulopsis stellata (Kroemer & Krumbholz) Lodder (1932) Cryptococcus stellatus (Kroemer & Krumbholz) Skinner (1947a) Saccharomyces bacillaris Kroemer & Krumbholz (Krumbholz 1931) Torulopsis bacillaris (Kroemer & Krumbholz) Lodder (1932) Cryptococcus bacillaris (Kroemer & Krumbholz) Skinner (1947a) Brettanomyces italicus Verona & Florenzano (1947)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoidal, (4.05.5)X(4.0-6.0) |im, single and in pairs.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

559

+

-

-/I +

-

+

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n -

Additional assimilation tests and other growth characteristics:

Ethylamine 2-Keto-D-gluconate D-Glucosamine (N)^ 5-Keto-D-gluconate 50% Glucose Saccharate n +/1 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol Urease L-Arabinitol Biotin-free Arbutin Pyridoxine-free Propane 1,2 diol 0.01% Cycloheximide Butane 2,3 diol Growth at SOT Nitrite Growth at 35T Cadaverine Growth at 3TC Creatinine L-Lysine + ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: 8 (Yamada and Kondo 1972a). Mol% G + C: 42.0, one strain {T^: Nakase and Komagata 1971d).

Origin of the strains studied: CBS 157, wine grapes; CBS 1713, wine; CBS 1779, tea-beer; CBS 4729, fruit fly (Drosophila pinicola); CBS 6100, unknown. Type strain: CBS 157. 64.143. Candida succiphila J.-D. Lee & Komagata (1980b) Synonym: Candida methanolophaga Kumamoto & Yamamoto (Kumamoto et al. 1986)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2.0^.5)X(3.0-6.0) [im, single, in pairs and short chains (Fig. 267).

Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. Aerobic growth is white, butyrous, soft, glossy and entire.

Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. Aerobic growth is white to slightly cream-colored, smooth, butyrous, soft, glistening and entire.

Fermentation:

Fermentation:

Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+/1 -

Glucose Galactose Sucrose Maltose

Lactose Raflfinose Trehalose

Vc. Descriptions of anamorphic ascomycetous genera and species

560

64.144. Candida suecica Rodrigues de Miranda & Norkrans (1968) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, long ovoidal, ellipsoidal or cylindrical, (2.2-3.6)x(5.8-13.7) jim, single, in pairs and short chains (Fig. 268). Pseudohyphae are present. Growth in yeast nitrogen base+ 0.5% glucose: After 3 days at 25°C, a delicately wrinkled pellicle is present.

Fig. 267. C. succiphila, CBS 7297. After 3 days in glucose-yeast extract-peptone broth at 25^C. Bar = 5 |im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Dalmau plate culture on corn meal agar: After 7 days at 25*'C, abundant pseudohyphae are present and consist of branched chains of cylindrical cells, many with verticils of ovoidal blastoconidia. Aerobic growth is white, smooth and wrinkled, soft, and dry with a lobed margin. Fermentation: Glucose Galactose Sucrose Maltose

-/I -

Lactose Raffinose Trehalose

+ + + + -/I + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation:

+/1

-/I

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + L-Lysine 5-Keto-D-gluconate n Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol + 10% NaCl/5% glucose L-Arabinitol + Starch formation Arbutin + Urease Propane 1,2 diol -/I Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.1% Cycloheximide +/1 Cadaverine Growth at 3 7 T +/w Growth at 4 0 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 7 (J.-D. Lee and Komagata 1980a); 7 (C.-E Lee et al. 1994b). Mol% G + C: 40.9, CBS 8003 {T^: J.-D. Lee and Komagata 1980a); 41.2, CBS 7297 (7;^: Kumamoto et al. 1986); 40.0, CBS 8003; 39.5, CBS 7297 (HPLC: C.-E Lee et al. 1994b).

Origin of the strains studied: CBS 8003, sap of a peach tree, Japan; CBS 7297, oil field, Japan. Type strain: CBS 8003.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-/I + + + + + + -/I +/1 -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin v Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01% Cycloheximide Nitrite Growth at 25''C + Cadaverine Growth at 3 0 T Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 42.7, 42.4, CBS 5724 {T^: Meyer et al. 1984; BD: Kurtzman 1987a, respectively).

Comments: C.-F. Lee et al. (1994b) found identical chromosomal DNA banding patterns and 90% DNA Origin of the strain studied: CBS 5724, sea water, relatedness between the type strains of C. methanolophaga Sweden. and C succiphila to confirm their conspecificity. Type strain: CBS 5724.

64. Candida Berkhout / S.A. Meyer et al.

561

Additional assimilation tests and other growth characteristics:

Fig. 268. C. suecica, CBS 5724. After 5 days in glucose-yeast extractpeptone broth at IS^'C. Bar = 5 |im.

64.145. Candida tanzawaensis Nakase & M. Itoh (Nakase et al. 1988b) Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are ovoidal, (1.0-2.0) x (1.54.0) [im, and occur singly or in pairs. Short, branched chains of cells are also present. Other cells are long ovoidal or elongate (lOjim and longer), and slender; some are branched. There is abundant pseudohyphal development. A pellicle appears to have dropped from the surface and the liquid is flocculant. Growth in yeast nitrogen base+ 0.5% glucose: After 3 days at 25°C, a wrinkled pellicle is present. Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consist of long, branched chains of cells with globose to ovoidal blastoconidia occurring singly or in small verticils. Septate hyphae may be present. Aerobic growth is white, dull, and irregular. The margin is fringed. Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ +

-

+ + + +

-

+

-

Lactose Raffinose Trehalose

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

L-Lysine + 2-Keto-D-gluconate + Ethylamine + 5-ICeto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose i)-Glucuronate 10% NaCl/5% glucose + Xylitol Starch formation I -Arabinitol Urease Arbutin + Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.01%) Cycloheximide Nitrite Growth at 30T + Gadaverine + Growth at 35T Creatinine ' Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Nakase et al. 1988b). Mol% G + C: 45.1, 44.1, CBS 7422 (T^ and HPLC, respectively: Nakase et al. 1988b.

Origin of the strains studied: CBS 7422, moss (Polytrichum commune), Mt. Tanzawa, Japan. Type strain: CBS 7422. Comments: In the original description of C tanzawaensis, Nakase et al. (1988b) reported D-arabinose positive or latent, ribose variable, galactitol, L-rhamnose and soluble starch negative or weakly positive, growth on 50% glucose weakly positive and growth at 35°C positive. These investigators recognized the physiological similarities between C tanzawaensis, C. kruisii and C oleophila and found the mol% G + C for C. oleophila (41.7%) lower than that of C. tanzawaensis (45.1%) and C kruisii (45.4%). DNA reassociation confirmed that these species are distinct. 64.146. Candida tenuis Diddens & Lodder (1942) Synonym: Mastigomyces philippovii Imshenetskii & Kriss (1933)

-

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C, the cells are ovoidal to cylindroidal or elongate, (1.5-3.5)x(2.0-7.0)|im, single, in pairs, chains and clusters (Fig. 269). Pseudohyphae may be present.

+

Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consist of branched chains of cylindrical cells, sometimes with verticils of ovoidal

w

-

1 +

-

+

-

+ + + +

-

+ +

-

Fig. 269. C. tenuis, CBS 615. After 3 days in glucose-yeast extractpeptone broth at 25T. Bar = 5 [im.

Vc. Descriptions of anamorphic ascomycetous genera and species

562

blastoconidia. Septate hyphae may be present. Aerobic growth is off-white, creamy, lacy to wrinkled, with a fringed border. Fermentation: Glucose Galactose Sucrose Maltose

V V -/s -/s

Lactose Raffinose Trehalose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+/1 -/I +/1

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/1 + + +/1 V

+ + -/I

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

+/1

-/I +

Ethylamine D-Glucosamine (N)^ 50% 50%) Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide U.1% Growth at 30°C Growth at 35''C

-/I

v +/w

+

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 44.0, CBS 615 {T^: Stenderup and Bak 1968); 43.8, one strain (Miranda et al. 1982); 43.2, AJ 4667 {T^\ Nakase and Komagata 197If); 44.4, CBS 7047 {T^: Meyer, unpublished data).

64.147. Candida tepae Grinbergs (1967) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C the cells are globose to ovoidal, (3.05.0)X(4.0-9.0) jim, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25°C, pseudohyphae consist of densely branched chains of ovoidal cells. Aerobic growth is off-white, butyrous, smooth, soft, mostly entire, but with a few tufts of pseudomycelical development. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 1 + + + 1 1 -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate L-Lysine 5 -Keto-D-gluconate Ethylamine D-Glucosamine (N)^ Saccharate D-Glucuronate 50% Glucose 10% NaCl/5% glucose Xylitol Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol 0.1% Cycloheximide Nitrite Growth at 25''C Cadaverine Growth at 30°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 41.0, CBS 5115 ( r ^ : Meyer et al. 1984).

Origin of the strains studied: CBS 5115, rotten wood (Laurelia philippiana). Type strain: CBS 5115. Origin of the strains studied: CBS 615, CBS 2308, Comments: Kurtzman and Robnett (1997) found CBS 2309, CBS 2885, CBS 4113, CBS 4285, CBS C tepae, C. antillancae and C bondarzewiae to have 4435, bark beetles; CBS 7047 (neotype of Mastigomyces identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, thus indicating the philippovii), litter of coniferous forest. three taxa to be conspecific. Type strain: CBS 615. Comments: Kurtzman and Robnett (1997) examined the LSU rRNA gene sequence of CBS 7047 (neotype of Mastigomyces philippovii) and found it to have only one nucleotide difference from the type strain of C tenuis.

64.148. Candida torresii (van Uden & Zobell) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis torresii van Uden & Zobell (1962)

64. Candida Berkhout / S.A. Meyer et al.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal to long-ovoidal, (1.5-2.5)x(3.5-7.0)|im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25*^0, pseudohyphae are absent. Aerobic growth is off-white, smooth, butyrous and entire. Fermentation: Glucose Galactose Sucrose Maltose

+/s

-

Lactose Raffinose Trehalose

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1

+/s

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 +/1

-

+ +

-

+

-

-

+ +

-

+/1

-

+ +

-

+ 1

-

+ -/I

+/1 Additional assimilation tests and other growth characteristics: -/I

2-Keto-D-gluconate + L-Lysine + 5 -Keto-D-gluconate n Ethylamine + Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose s Xylitol + 10% NaCl/5% glucose + L-Arabinitol Starch formation Arbutin + Urease V Propane 1,2 diol V Biotin-free Butane 2,3 diol Pyridoxine-free + Nitrite 0.01% Cycloheximide Cadaverine + Growth at SO^C + Creatinine Growth at SS^C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 52.0, AJ 4937 {T^: Nakase and Komagata 1971f); 51.7, 51.7, CBS 5152 (BD: Meyer et al. 1984; 7;^: Ribeiro 1995, respectively).

Origin of the strains studied: CBS 5152, sea water, Torres Strait, Australia; CBS 6035, tunnels of bark beetles in Ficus sycomorus, South Africa. Type strain: CBS 5152. 64.149. Candida tropicalis (Castellani) Berkhout (1923) Synonyms: Oidium tropicale Castellani (1910) Monilia tropicalis (Castellani) Castellani & Chalmers (1913) Endomyces tropicalis Castellani (1911) [non Endomyces tropicalis Acton 1919]

563

Atelosaccharomyces tropicalis (Castellani) Froilano de Mello (Froilano de Mello and Gonzaga Femandes 1918) Myceloblastanon tropicale (Castellani) Ota (1928) Castellania tropicalis (Castellani) Dodge (1935) Procandida tropicalis (Castellani) Novak & Zsolt (1961) Monilia Candida Bonorden (1851) Monilia Candida Hansen (1888a) Saccharomyces linguae-pilosae Lucet (1901) Cryptococcus linguae-pilosae (Lucet) Gedoelst (1902) Myceloblastanon linguae-pilosae (Lucet) Ota (1928) Torulopsis linguae-pilosae (Lucet) de Almeida (1933) Castellania linguae-pilosae (Lucet) Dodge (1935) Monilia bonordenii Vuillemin (1911) Candida bonordenii (Vuillemin) Basgal (1931) Endomyces paratropicalis Castellani (1911) Monilia paratropicalis (Castellani) Castellani & Chalmers 1913) Atelosaccharomyces paratropicalis (Castellani) Froilano de Mello (Froilano de Mello and Gonzaga Femandes 1918) Myceloblastanon paratropicale (Castellani) Ota (1928) Candida paratropicalis (Castellani) Basgal (1931) Mycocandida paratropicalis (Castellani) Guerra (1935) Castellania paratropicalis (Castellani) Dodge (1935) Candida paratropicalis J.G. Baker, Salkin, Pincus & D'Amato (1981) [non Candida paratropicalis (Castellani) Basgal (1931)] Endomyces bronchialis Castellani (1912b) Monilia bronchialis Castellani (Castellani and Chalmers 1913) Myceloblastanon bronchiale (Castellani) Ota (1928) Candida bronchialis (Castellani) Basgal (1931) Castellania bronchialis (Castellani) Dodge (1935) Endomyces entericus Castellani (1912b) Monilia enterica (Castellani) Castellani & Chalmers (1913) Myceloblastanon entericum (Castellani) Ota (1928) Candida enterica (Castellani) de Almeida (1933) Castellania enterica (Castellani) Dodge (1935) Monilia faecalis (Castellani) Castellani & Chalmers (1913) Myceloblastanon faecalis (Castellani) Ota (1928) Castellania faecalis (Castellani) Dodge (1935) Endomyces insolitus Castellani (1912a) Monilia insolita (Castellani) Castellani & Chalmers (1913) Myceloblastanon insolitum (Castellani) Ota (1928) Candida insolita Redaelli (Graziano 1930) Castellania insolita (Castellani) Dodge (1935) Endomyces niveus Castellani (1912a) Monilia niuea (Castellani) Castellani & Chalmers (1913) Myceloblastanon niveum (Castellani) Ota (1928) Candida niuea (Castellani) Basgal (1931) Castellania niuea (Castellani) Dodge (1935) Endomyces burgessi Castellani (1913) Monilia burgessi Castellani (Castellani and Chalmers 1913) Castellania burgessi (Castellani) Dodge (1935) Endomyces perryi Castellani (1913) Parendomyces perryi (Castellani) Dodge (1935) Parasaccharomyces candidus Anderson (1917) Myceloblastanon candidum Ota (1928) Endomyces cruzi Froilano de Mello & Paes (1918) Zymonema cruzi (Froilano de Mello & Paes) Dodge (1935) Monilia metatropicalis Castellani (Castellani and Chalmers 1919) Castellania metatropicalis (Castellani & Chalmers) Dodge (1935) Monilia pseudobronchialis Castellani (Castellani and Chalmers 1919) Monilia accraensis Macfie (1921) Candida vulgaris Berkhout (1923) Geotrichoides vulgaris (Berkhout) Langeron & Talice (1932) Blastodendrion irritans Mattlet (1926) Parasaccharomyces irritans (Mattlet) Dodge (1935) Blastodendrion kayongosi Mattlet (1926) Cryptococcus kayongosi (Mattlet) Nannizzi (1934) Torulopsis tonsillae Camevale-Ricci (1926)

564

Vc. Descriptions of anamorphic ascomycetous genera and species

Monilia issavi Mattlet (1926) Syringospora issavi (Mattlet) Dodge (1935) Mycotorula interdigitalis Redaelli apud Flarer (1931) Mycotorula dimorpha Redaelli & Ciferri (Ciferri and Redaelli 1935) Syringospora dimorpha (Redaelli & Ciferri) Dodge & Moore (1936) Mycotorula trimorpha Redaelli & Ciferri (Ciferri and Redaelli 1935) Mycotoruloides trimorpha (Redaelli & Ciferri) Dodge & Moore (1936) Monilia aegyptiaca Khouri (1932) Castellania aegyptiaca (Khouri) Dodge (1935) Monilia argentina Vivoli, Avellaneda & de Bardessi (1932) Mycotoruloides argentina (Vivoli, Avellaneda & de Bardessi) Dodge (1935) Cryptococcus mattleti Nannizzi (1934) Castellania accraensis (Macfie & Ingram) Dodge (1935) Monilia murmanica Plevako and Cheban (1935) Parasaccharomyces talicei Dodge (1935) Pseudomonilia miso Mogi (1942) Mycotorula japonica Yamaguchi (1943) Candida benhamii Novak & Vitez (1964) Candida citrica Furukawa, Matsuyoshi, Minoda & K. Yamada (1977) Candida bimundalis Wickerham & Santa Maria var. chlamydospora Nowakowska-Waszczuk & Pietka (1983) Torulopsis Candida (Saito) Lodder var. nitratophila NowakowskaWaszczuk & Pietka (1983)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25''C the cells are subglobose to ovoidal, (3.5-7.0)x(5.5-10.0)|im, single and in pairs. Dalmau plate culture on corn meal agar: After 7 days at 25''C, pseudohyphae consist of branched chains of cylindrical cells with blastoconidia formed singly or in verticils; septate hyphae are usually present. Aerobic growth is white, smooth, butyrous, and soft with a fringed border.

Fermentation:

Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

Lactose Raffinose Trehalose

-

+/

+

+ + V V

+ +/1 +

-

V

-

+ . +

-

-/I

-

V

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ V

-

+/

-

+ + V V V V

+ +/

-

+

-

V

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine

+ + n

-

+/1

-

+ -/I

-

+

-

L-Lysine Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.1%) Cycloheximide Growth at ?>TC Growth at 40X

growth + +

-

+/1 1

V

+ + + +

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 34.9, one strain {T^: Stenderup and Bak 1968); 34.9, UCD-FST 60-31 ( 7 ^ : Meyer and Phaflf 1969); 35.0, one strain {T^\ Nakase and Komagata 1968a); 34.4-35.4, 3 strains {T^: Nakase and Komagata 1971f) 36.1, CBS 94; 35.1, CBS 6320; 35.9, CBS 5701 {T^: Meyer et al. 1975); 34.1, IFO 0006; 34.4, ATCC 750 {T^\ Kaneko et al. 1977); 33.2, GSU 59; 34.6, GSU 372 and 446 {T^: Ahearn et al. 1977); 35.6, 2 strains {T^\ Su and Meyer 1991).

Origin of the strains studied: CBS 94, human; CBS 642, unknown; CBS 643, kefyr; CBS 2310 (type strain of C. vulgaris), unknown; CBS 2311, unknown, from O. Winge; CBS 2313 (type strain of Mycotorula dimorpha, interdigital infection); CBS 2314 {Mycotorula trimorpha), child's feces; CBS 2317, fodder yeast; CBS 2318, sprue in Puerto Rico (Ashford 1917); CBS 2320, unknown, from Dessy; CBS 4913, unknown, from Sawai as Mycotorula japonica', CBS 5701 (type strain of C benhamii), infected nail; CBS 6320 (citric-acid producer); CBS 6361, CBS 6362, blood (Ahearn et al. 1977); CBS 6400, soil, Japan; CBS 6628, CBS 6632, unknown; CBS 6719, water; CBS 7097, human, Japan; CBS 8072 (type strain of C paratropicalis Baker et al. 1981), blood; CBS 8250 (type strain of C bimundalis var. chlamydospora), CBS 8252 (type strain of Torulopis Candida var. nitratophila), fermentation vats, Poland. Type strain: CBS 94. Comments: Meyer et al. (1975) and Kaneko et al. (1977) performed DNA reassociation experiments to confirm that C. tropicalis, C. maltosa and C sake are distinct species. These species are physiologically similar, but can be separated on growth at 35''C (C sake, negative; C. tropicalis, C. maltosa, positive) and the assimilation of soluble starch (C. maltosa, C. sake, negative; C. tropicalis, positive). 64.150. Candida tsuchiyae Nakase & M. Suzuki (1985d) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to ovoidal, (3.55.0)x(4.5-6.0)|im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are absent. Aerobic growth is white, smooth, butyrous and entire.

64. Candida Berkhout / S.A. Meyer et al

565

Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

f f*w

0^- f f

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + -

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate D-Glucosamine (N)^ Saccharate 50% Glucose D-Glucuronate 10% NaCl/5% glucose Xylitol 1 Starch formation L-Arabinitol Urease Arbutin Biotin-free Propane 1,2 diol Pyridoxine-free Butane 2,3 diol n 0.1% Cycloheximide Nitrite Growth at 2 5 T Cadaverine + Growth at 30°C Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q; 9 (Nakase and Suzuki 1985d). Mol% G + C: 47.4, 47.6, 2 strains (T^: Nakase and Suzuki 1985d).

Origin of the strain studied: CBS 7195, moss, Japan. Type strain: CBS 7195. 64.151. Candida utilis (Henneberg) Lodder & Kreger-van Rij (1952) See Pichia jadinii: p. 314 64.152. Candida vaccinii Tokuoka, Ishitani, S. Goto & Komagata (1987) Growth in glucose-yeast extract-peptone broth: After 3 days at 25^C, the cells are predominantly globose with some that are slightly ovoidal, (2.0-5.0 |im). Short chains are more frequent than single cells (Fig. 270).

Fig. 270. C. vaccinii, CBS 7318. After 3 days in glucose-yeast extractpeptone at 25''C. Bar = 5 |Lim.

Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are absent. Aerobic growth is off-white to beige, smooth and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ + -

Lactose Raffinose Trehalose

+ +/1 + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

1 n 1 + + + +

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 37"C Growth at 40°C

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Tokuoka et al. 1987). Mol% G + C: 52.0, CBS 7318 {T^\ Tokuoka et al. 1987).

+ + + n n 1 +/w

566

Vc. Descriptions of anamorphic ascomycetous genera and species

Origin of the strain studied: CBS 7318, flower of blueberry (Vaccinium sp.), Japan. Type strain: CBS 7318. Comments: This species is phenotypically similar to C magnoliae, but they differ by ca. 8mol% G + C. No other characteristic seems to distinguish these two species. See comments for C. magnoliae. Also, C uaccinii shares properties in common with C etchellsii and C uersatilis. 64.153. Candida valdiviana Grinbergs & Yarrow (1970a) Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (2.0^.0)X (4.0-6.5) jim, single and in pairs (Fig. 271). Dalmau plate culture on corn meal agar: After 14 days at 25T, pseudohyphae consist of branched chains of elongate cells with verticils of ovoidal blastoconidia. Aerobic growth is white, creamy, smooth, glistening and entire. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

n

+/1

+/1

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/1 -/I -/I + +

+/1 -/I + + + 1 +

>^:^'..^/-

•|f*;.;. fr-;: ^^^40

2-Keto-D-gluconate L-Lysine 5 -Keto-D-gluconate Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose Xylitol 10% NaCl/5% glucose L-Arabinitol Starch formation Arbutin Urease Propane 1,2 diol Biotin-free Butane 2,3 diol Pyridoxine-free Nitrite 0.1% Cycloheximide Cadaverine Growth at 3 0 T Creatinine Growth at 3 5 T ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 55.3, CBS 5721 (BD: Meyer et al. 1984).

Origin of the strains studied: CBS 5721, sputum. Chile; CBS 6247, insect frass, Spain. Type strain: CBS 5721. 64.154. Candida valida (Leberle) van Uden & H.R. Buckley (1970) See Pichia membranifaciens: p. 319 64.155. Candida vanderwaltii (Vidal-Leiria) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other growth characteristics:

\0m^

Fig. 271. C valdiviana, CBS 5721. After 3 days in glucose-yeast extract-peptone at 25°C. Bar = 5 ^im.

Synonym: Torulopsis uanderwaltii Vidal-Leiria (1966b)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are ovoidal, (2.0-3.0)x(4.06.0) |im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are usually absent, sometimes short, dense chains of ovoidal cells are present. Aerobic growth is off-white to cream-colored, shiny, soft, smooth and entire. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + -/I

+ + + 1 1 -

iV-Acetyl-D-glucosamine n Methanol Ethanol Glycerol + Erythritol Ribitol + Galactitol 1 D-Mannitol + D-Glucitol + a-Methyl-D-glucoside Salicin D-Gluconate • DL-Lactate Succinate + Citrate + Inositol Hexadecane n Nitrate + Vitamin-free -

64. Candida Berkhout / S.A. Meyer et al.

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate v D-Glucosamine (N)^ 5-Keto-D-gluconate n 50% Glucose Saccharate 10% D-Glucuronate 10%) NaCl/5% NaCl/5%o glucose Starch formation Xylitol + Urease L-Arabinitol + Biotin-free Arbutin Pyridoxine-free Propane 1,2 diol 0.1%) Cycloheximide Butane 2,3 diol 1 Growth at 30T Nitrite + Growth at 35°C Cadaverine + Growth at 2>TC Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 49.7, CBS 5524 {T^: Stenderup et al. 1972).

+ n

Origin of the strain studied: CBS 5524, winery, South Africa. Type strain: CBS 5524. 64.156. Candida vartiovaarae (Capriotti) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) Synonyms: Torulopsis vartiovaarae (as T. vartiovaarai) Capriotti (1961e) Candida vartiovaarae (Capriotti) van Uden & H.R. Buckley, (1970) nom. inval.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are subglobose to ovoidal, (3.0-5.0)x(5.5-8.0)!im, single and in pairs (Fig. 272). Van Uden and Buckley (1970) reported that a pellicle may be formed. This was not confirmed. Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are sometimes formed, and consist of branched chains of elongate to cylindrical cells, sometimes with dense verticils of subglobose to ovoidal blastoconidia. Aerobic growth is off-white to cream-colored, somewhat dull, soft, smooth and entire. Fermentation: Glucose Galactose Sucrose Maltose

+ + v

Lactose Raffinose Trehalose

-

567

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + v + +

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate D-Glucosamine (N)^ 5-Keto-D-gluconate 50% Glucose Saccharate n 10% NaCl/5% glucose D-Glucuronate Starch formation Xylitol + Urease L-Arabinitol Biotin-free Arbutin + Pyridoxine-free Propane 1,2 diol + 0.01% Cycloheximide Butane 2,3 diol + Growth at 25*'C Nitrite + Growth at SOT Cadaverine + Growth at 35T Creatinine L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 48.8, CBS 4289 (7^: Meyer et al. 1984).

Origin of the strains studied: CBS 4289 and CBS 4290, soil, Finland; CBS 6720, water, U.S.A.; CBS 2895, cider, U.K. Type strain: CBS 4289. 64.157. Candida versatilis (Etchells & T.A. Bell) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Synonyms: Brettanomyces versatilis Etchells & T.A. Bell (1950b) Torulopsis versatilis (Etchells & T.A. Bell) Lodder & Kreger-van Rij (1952) Torulopsis anomala Lodder & Kreger-van Rij (1952) Torulopsis mannitofaciens Onishi & T. Suzuki (1969a) Candida mannitofaciens (Onishi & T. Suzuki) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Torulopsis halophilus Onishi (1957) nom. inval. Candida halophila Yarrow & S.A. Meyer (1978) Candida rhodohalophila Mori (Suzuki et al. 1992) nom. nud. Debaryomyces tamarii Y. Ohara & Nonomura (1954c) Pichia tamarii (Y. Ohara & Nonomura) Campbell (1973) Torulaspora tamarii (Y Ohara & Nonomura ex van der Walt & E. Johannsen) van der Walt & E. Johannsen (1975a) Fig. 272. C. vartiovaarae, CBS 4289. After 3 days in glucose-yeast Debaryozyma tamarii (Y Ohara & Nonomura ex van der Walt & extract-peptone at 25''C. Bar = 5 |im. E. Johannsen) van der Walt & E. Johannsen (1978)

Vc. Descriptions of anamorphic ascomycetous genera and species

568

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are globose to subglobose, 3.0-6.0 (im, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae are absent. Aerobic growth is off-white to beige, glistening soft, smooth and entire. Fermentation: Glucose Galactose Sucrose Maltose

s s v v

Lactose Raffinose Trehalose

-/s -/s

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ +/1 + -/I +

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assimilation tests and other characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

-/I + +

-/I v -/I v +/1 v + -

growth

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide 0.1% Cycloheximide Growth at 25°C Growth at 3 0 T Growth at 35°C

^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 45.4-46.6, 3 strains {T^\ Nakase and Komagata 1971d); 53.7, CBS 1752 {T^\ Meyer et al. 1984); 47.5, type strain of C. mannitofaciens (BD: Meyer et al. 1984); 46.4, one strain of Debaryomyces tamarii (BD: Price et al. 1978); 45.0, type strain; 46.2, type strain of C. mannitofaciens; 44.1, type strain of C halophila; 45.4, JCM 5957 and JCM 5974; 46.0, JCM 5958 {T^: Suzuki et al. 1992).

Origin of the strains studied: Fermenting cucumber brines in U.S.A. (8, including CBS 1731, type strain of Torulopsis anomala; CBS 1752, type strain of C versatilis)'. CBS 5007, sugar, Mauritius; soy mash (3, including CBS 5981, type strain of C. mannitofaciens; CBS 4019, type strain of C halophila; CBS 4333, type strain of Debaryomyces tamarii). Type strain: CBS 1752.

Comments: Suzuki et al. (1992) demonstrated the conspecificity of C. uersatilis, C. mannitofaciens, C. halophila, Debaryomyces tamarii and two strains designated ' C rhodohalophila' in studies that included DNA base compositions and reassociations, electrophoretic patterns of enzymes, and proton magnetic resonance (PMR) spectra of cell wall mannans. F.-L. Lee et al. (1992) performed DNA reassociations on these same species and also reported their conspecificity. The proper identification of D. tamarii is welcomed since this yeast did not fit well in Debaryomyces. Previously, it was noted that it had a higher mol% G + C than the other species in Debaryomyces (Nakase and Komagata 1971a, Price et al. 1978) and that it was widely separated from other species of Debaryomyces by ribosomal RNA comparisons (Kurtzman and Robnett 1991, Yamada et al. 1991a). Although D. tamarii was described as having spherical warty-walled ascospores, no one has been able to confirm this claim. [The mol% G + C value, 53.7%, previously reported for the type strain of C. uersatilis (Meyer et al. 1984) is most likely an error; possibly a culture mix-up with strains of C etchellsii (52.6%) that have similar CBS numbers.!

64.158. Candida vinaria Y. Ohara, Nonomura & Yunome ex M.Th. Smith (1973) Growth in glucose-yeast extract-peptone broth: After 3 days at 25^C, the cells are ovoidal, (1.5-2.5)x(3.07.0) jim, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25''C, pseudohyphae consist of branched chains of elongate cells, sometimes with a few ovoidal blastoconidia. Aerobic growth is off-white, shiny, butyrous, smooth and entire. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + -/I -/I +/1

7^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

64. Candida Berkhout / S.A. Meyer et al.

Additional assimilation tests and other growth characteristics: + 2-Keto-D-gluconate L-Lysine 5 -Keto-D-gluconate + Ethylamine Saccharate D-Glucosamine (N)^ D-Glucuronate 50% Glucose — Xylitol 10% NaCl/5% glucose + L-Arabinitol Starch formation — — Arbutin Urease _ _ Propane 1,2 diol + Biotin-free _ Butane 2,3 diol + Pyridoxine-free Nitrite 0.1% Cycloheximide + Cadaverine Growth at WC + _ Creatinine Growth at 35°C ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 44.1, type strain (T^i^,: Nakase and Komagata 197 If).

Origin of the strain studied: CBS 4077, graLpe must, Japan. Type strain: CBS 4077. 64.159. Candida vini (Vallot ex Desmazieres) van Uden & H.R. Buckley ex S.A. Meyer & Ahearn (1983) Synonyms: Mycoderma vini Vallot ex Desmazieres (1827) [non Mycoderma vini Grawitz 1877; nee Mycoderma vini de Rossi 1917] Mycokluyveria vini (Vallot ex Desmazieres) Ciferri & Redaelli (1947) Candida vini (Vallot ex Desmazieres) van Uden & H.R. Buckley (1970) nom. inval. Mycoderma cerevisiae Desmazieres (1827) Mycokluyveria cerevisiae (Desmazieres) Ciferri & Redaelli (1947) Saccharomyces mycoderma Reess (1870) Candida mycoderma (Reess) Lodder & Kreger-van Rij (1952) Azymocandida mycoderma (Reess) Novak & Zsolt (1961) Mycoderma gallica Leberle (1909) Mycoderma vini Vallot ex Desmazieres var. paradoxa Zimmermann (1938)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25T, the cells are ovoidal, (3.5-5.5)x(4.58.0) |im, single, in pairs, and small groups or chains. After one month, islets and an incomplete pellicle may be present. Growth in yeast nitrogen base + 0.5% glucose: After 5 days at 25*^0, a pellicle may be present. Dalmau plate culture on corn meal agar: After 14 days at IS^'C, pseudohyphae consist of branched chains of elongate cells, sometimes with oval blastoconidia. Aerobic growth is off-white, dull, and creamy, with a slightly granular surface area and a fringed border. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raflfinose Trehalose

569

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A^^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

-/ -/ + +

-

V

+

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Arbutin Propane 1,2 diol Butane 2,3 diol Nitrite Cadaverine Creatinine L-Lysine

V

n n

V

-

+

-

+

Ethylamine D-Glucosamine (N)^ 50% Glucose 10% NaCl/5% glucose Starch formation Urease Biotin-free Pyridoxine-free 0.01% Cycloheximide Growth at 2 5 T Growth at 30''C Growth at 35°C

+

-

-/I +

-

+ V

-

^ Utilization of D-gl ucosamine as a source of nitrogen. Co-Q: Not determined. M o l % G + C: 34.1, CBS 639 (BD: Meyer et al. 1984); 32.0, CBS 633; 35.4, CBS 639 (7;„: Stenderup et al. 1972); 32.2, CBS 2122; 33.2, CBS 2119 {T^: Meyer, unpublished data)

Origin of the strains studied: CBS 634, unknown, received from W.B. Bierberg as Mycoderma cerevisiae; CBS 639, sour wine; CBS 640, cloudy wine (type of Mycoderma vini var. paradoxus); CBS 2099, perry; CBS 2109, CBS 2119, wine; CBS 2122, beer. Type strain: CBS 639 (neotype, van Uden and Buckley 1970, p. 1073). Comments: Many strains sporulate on 5% Difco malt agar, either alone or more commonly when mixed with a compatible mating type and form hat-shaped ascospores. From preliminary protein electrophoresis studies and DNA comparisons, the strains included in this taxon do not represent a single species (S. Lee and Meyer, unpublished data). Kurtzman and Robnett (unpublished data) found the type strains of C. vini and Pichiafluxuum to have identical sequences in a 600-nucleotide region at the 5^ end of large subunit (26S) rDNA, indicating the two taxa to be conspecific.

570

Vc. Descriptions oj'anamorphic ascomycetous genera and species

64.160. Candida viswanathii Viswanathan & H.S. Randhawa ex R.S. Sandhu & H.S. Randhawa (1962)

Additional assimilation tests and other growth characteristics:

Synonyms: Candida uiswanathii Viswanathan & Randhawa (1959) nom. inval. Trichosporon lodderae (as T lodderi) Phaff, Mrak & Williams (1952) Fermentotrichon lodderae (Phaff, Mrak & Williams) Novak & Zsolt (1961) Candida lodderae (Phaff, Mrak & Williams) S.A. Meyer & Ahearn (1983) [non Candida lodderae Kumbhojkar (198 l)]

Growth in glucose-yeast extract-peptone broth: After 3 days at 25OC, the cells are subglobose to ovoidal, (3.5-7.0) x (5.0-9.0) pm, and occur singly and in pairs. Some cylindrical cells and pseudohyphae may also be present (Fig. 273). Dalmau plate culture on corn meal agar: After 7 days at 25OC, pseudohyphae consist of branched chains of long, cylindrical cells with small verticils of ovoidal blastoconidia; septate hyphae may also be present. Aerobic growth is off-white to chalky-white, dull, dry to powdery, smooth and butyrous or lacy to wrinkled with a mycelial edge. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xvlose

+

s v

+ +

+ v

+ + +

+ -

-

+

-

+ + -/I -

-/I L-Rhamnose D-Glucosamine

-

-11

Lactose Raffinose Trehalose

N-Acetyl-D-glucosamine

Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaIicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + -

+ -

+ +

+ +/I

2-Keto-D-gluconate + Ethylamine + 5-Keto:~-gluconate + D-Glucosamine (N)' Saccharate n 50% Glucose + 10% NaCI/5% glucose + D-Glucuronate Xylitol +/I Starch formation L-Arabinitol -/I Urease + Biotin-free Arbutin Propane 1,2 diol Pyridoxine-free + Butane 2 , 3 diol 0.1% Cycloheximide + Nitrite Growth at 35°C + Cadaverine + Growth at 37°C + Creatinine Growth at 40°C v L-Lysine + Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 46.3, type strain, CBS 4024 (T,: Meyer and Phaff 1972); 45.6, one strain (T,: Nakase and Komagata 1971g); 45.9, CBS 4024; 45.6, CBS 1924 (T,: Duncan and Meyer, unpublished data). -

'

Origin of the strains studied: CBS 4024, cerebrospinal fluid, India; CBS 5362, sputum, India; CBS 1924, shrimp (Peneaus setiferus), from Gulf of Mexico. Type strain: CBS 4024. Comments: Kurtzman and Robnett (1997) found only two nucleotide differences in the comparison of rRNA gene sequences between the type stains of C. viswanathii and C. lodderae. Mol% G + C contents are similar and first derivative curves of the thermal denaturations are identical (Duncan and Meyer, unpublished data). Saccharornyces pleornorphus Lodder (1932) had been considered a synonym of C. lodderae. Slight physiological differences exist between these strains. Molecular comparisons of these strains are being done to determine the status of S. pleornorphus

-

+

+-

+ -

64.161. Candida wickerhamii (Capriotti) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Synonym: Torulopsis wickerhamii Capriotti (19588)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25"C, the cells are globose to subglobose, (3.04.5) x(3.04.5) pm, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25OC, pseudohyphae are absent. Aerobic growth is off-white to cream-colored, smooth, soft, and entire. Fermentation: Fig. 273. C. uiswanathii, CBS 1924. After 3 days in glucose-yeast extract-peptone broth at 25°C. Bar = 5 km.

Glucose Galactose Sucrose Maltose

+ -

-

Lactose Raffinose Trehalose

571

64. Candida Berkhout / S.A. Meyer et al.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ V

-

+ + 1 + + -/I

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+

-

+ +

-

+

V

-

+ +

-

+

-

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate

V

L-Lysine

5-Keto-D-gluconate n Ethylamine Saccharate D-Glucosamine (N)^ _ 50% Glucose D-Glucuronate 1 Xylitol 10% NaCl/5% glucose _ Starch formation L-Arabinitol Arbutin + Urease + Propane 1,2 diol Biotin-free 1 Butane 2,3 diol Pyridoxine-free + 0.1% Cycloheximide Nitrite Growth at 35T Cadaverine + Growth at 2>TC Creatinine ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 38.1, CBS 2928 {T^ : Meyer et al. 1984).

+

+

_ n

_ + + V

_

Origin of the strains studied: CBS 2928, silage, Italy; CBS 6395, insect tunnels in timber. South Africa. Type strain: CBS 2928. 64.162. Candida xestobii Yarrow & S.A. Meyer (1978) Synonym: Torulopsis xestobii Jurzitza (1970) nom. nud.

Growth in glucose-yeast extract-peptone broth: After 3 days at 25*'C, the cells are globose to ovoidal, (2.23.6)X(2.9-4.3) |Jim, single and in pairs. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae are absent. Aerobic growth is off-white to beige, smooth, glistening, soft and entire. Fermentation: Glucose Galactose Sucrose Maltose

Lactose Raffinose Trehalose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + -/I +

-

1 1 -/I

-

+ +

-

1

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

1

-

+ -/I

-

1 +

-

n

Additional assimilation tests and other g;rowth characteristics: +

2-Keto-D-gluconate + Ethylamine + 5-Keto-D-gluconate n D-Glucosamine (N)^ n Saccharate 50% Glucose _ _ D-Glucuronate 10% NaCl/5% glucose Xylitol + Starch formation L-Arabinitol + Urease Arbutin -/I Biotin-free Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.1% Cycloheximide + Nitrite Growth at 25^C + Cadaverine + Growth at 30"C w Creatinine Growth at 35°C L-Lysine + ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: Not determined. Mol% G + C: 47.8, CBS 5975 (7;^,: Stenderup et al. 1972); 48.7, CBS 5975 (BD: Meyer et al. 1984).

Origin of the strain studied: CBS 5975, bark beetles (Xestobium plumbeum). Type strain: CBS 5975. Comments: Kurtzman and Robnett (1997) found C fukuyamaensis and C. xestobii to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. Furthermore, the sequence of Pichia guilliermondii differed by only one nucleotide, suggesting that it is the teleomorph of these two anamorphic taxa. 64.163. Candida zeylanoides (Castellani) Langeron & Guerra (1938) Synonyms: Monilia zeylanoides Castellani (1920) Mycotorula zeylanoides (Castellani) Redaelli & Ciferri (Ciferri and Redaelli 1935) Parendomyces zeylanoides (Castellani) Dodge (1935) Pseudomonilia zeylanoides (Castellani) Dodge & Moore (1936) Azymocandida zeylanoides (Castellani) Novak & Zsolt (1961) Cryptococcus macroglossiae Castellani (1925) Monilia macroglossiae Castellani (1925) Torulopsis macroglossiae (Castellani) Castellani & Jacono (1933) Mycocandida macroglossiae (Castellani) Redaelli & Ciferri (Ciferri and Redaelli 1935)

Vc. Descriptions of anamorphic ascomycetous genera and species

572

Blastodendrion macroglossiae (Castellani) Langeron & Guerra (1935) Parendomyces macroglossiae (Castellani) Dodge (1935) Monilia zeylanoides Castellani var. macroglossiae Castellani (1937a) Cryptococcus uuae Pollacci & Nannizzi (Motta 1926) Monilia uuae (Pollacci & Nannizzi) Vuillemin (1931) Torulopsis uuae (Pollacci & Nannizzi) Lodder (1934) Syringospora uuae (Pollacci & Nannizzi) Dodge (1935) Blastodendrion canis von Szilvinyi (1934) Monilia parazeylanoides Castellani (1937a) Pichia dubia Dietrichson (1954) Trichosporon piscium Siepmann (Siepmann and Hohnk 1962) Candida iberica C. Ramirez & C. Gonzalez (1972)

Growth in glucose-yeast extract-peptone broth: After 3 days at 25°C, the cells are oval to elongate, (2.5-7.0)X (5.0-10.0) [i-m, single, in pairs and short chains. After one month a pellicle may be present. Dalmau plate culture on corn meal agar: After 14 days at 25°C, pseudohyphae consist of branched chains of cylindrical cells, often with verticils of oval blastoconidia. Aerobic growth is off-white to creamcolored, shiny, smooth to wrinkled and entire to fringed. Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-/s -

Lactose Raffinose Trehalose

-/s

+ -/I +/1

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/1

-

-/I +

-

-/I

V

+

V

-

+ +

-

V

+/1

-

+ +

-

V

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Ethylamine v 5-Keto-D-gluconate + D-Glucosamine (N)^ Saccharate n 50% Glucose v D-Glucuronate 10% NaCl/5% glucose v Xylitol Starch formation L-Arabinitol Urease Arbutin v Biotin-free v Propane 1,2 diol Pyridoxine-free + Butane 2,3 diol 0.1% Cycloheximide + Nitrite v Growth at SOT + Cadaverine v Growth at SS^'C v Creatinine Growth at 37°C w/L-Lysine v ^ Utilization of D-glucosamine as a source of nitrogen. Co-Q: 9 (Yamada and Kondo 1972a). Mol% G + C: 57.6, CBS 619 (7;^: Stenderup and Bak 1968); 54.5,

2 strains (7;„: Nakase and Komagata 1968a); 55.9, ATCC 7351 (CBS 619); 54.7, AJ 4741 (T^: Nakase and Komagata 197If).

Origin of the strains studied: CBS 619, blastomycotic macrdglossia, Sri Lanka; CBS 641, CBS 2328, chilled beef, Australia; CBS 947, throat; CBS 1922, unknown; CBS 2000, sputum, Norway; CBS 2326, dog's skin; CBS 2329, probably human; CBS 4909, sea water; CBS 5122, skin; CBS 5262, dolphin's skin; CBS 5446, 5447, salami, Yugoslavia; CBS 5718, red clover, Canada; CBS 6134, 6135, feces, Finland; 6165, probably human; CBS 6391, 6408, 6409, 6410, 6411, sausages, Spain. Type strain: CBS 619 (neotype, Diddens and Lodder 1942, p. 304). Comments: Kurtzman and Robnett (1997) found C. krissii and C zeylanoides to have identical sequences in a 600-nucleotide region at the 5' end of large subunit (26S) rDNA, indicating the two taxa to be conspecific. Comments on the genus Viljoen and Kock (1989b) presented a chronological account of the history of the genus Candida Berkhout with the rationale of various investigators for the changes that took place until the delimitation of the genus to anamorphs with only ascomycetous affinity. Several investigators (von Arx and Weijman 1979, Moore 1980, Golubev 1981, Weijman and Rodrigues de Miranda 1988) reclassified the basidiomycetous Candida species and transferred them to other genera. Van der Wak (1987) made the necessary changes to separate the ascomycetous and basidiomycetous anamorphic yeasts into appropriate families. He reinstated the family name Candidaceae for the ascomycetous anamorphic yeasts (to which Candida was assigned) and restricted the family Cryptococcaceae to basidiomycetous anamorphs and the family Sporobolomycetaceae to anamorphs termed ustomycetous. Weijman and Rodrigues de Miranda (1988) compared members of the genus Candida on the basis of carbohydrate patterns of intact whole cell hydrolyzates. They found three groups. The first group represented ascomycetous yeasts where mannose dominated, and rhamnose, fijcose and xylose were absent. The basidiomycetous yeasts were distributed in the other two groups; one characterized by the presence of xylose and low mannose and the other by the presence of fiacose and/or rhamnose with significant amounts of mannose. Then, Weijman et al. (1988) redefined the genus Candida, emended Cryptococcus and Rhodotorula, and transferred the basidiomycetous 'Candida' species to the appropriate emended genera. Although the species with a basidiomycetous affinity have been removed from the genus, Candida still remains heterogeneous. The mol% G + C ranges from 30-62.7%, Co-Q 6, 7, 8 and 9 are present, fermentation may be absent to strong, cells vary in shape and size, and assimilatory properties vary. Candida species that were found to sporulate have teleomorphic states in eleven different genera. The taxonomic boundaries of Candida still remain

64. Candida Berkhout / S.A. Meyer et al.

broad and essentially any asexual yeast that does not fit the criteria of some other genus will find its way into Candida. In particular, Candida acts as a depository for all the asexual yeasts with ascomycetous affinity except those with: (a) acetic acid production (Brettanomyces), (b) bipolar budding on a broad base (Kloeckem and Schizoblastosporion), (c) triangular cells (Trigonopsis), (d) blastoconidia formed on sympodulae (Sympodiomyces) or on pedicils or denticles (Blastobotrys), (e) dichotomously branched terminal pseudohyphal cells (Botryozyma), (f) needle-shaped terminal conidia (Aciculoconidium), and (g) arthroconidia (Arxula, Geotrichum), (h) carotenoid pigments {Lalaria, Oosporidium, Saitoella), (i) extracellular starch-like compounds (Myxozyma). In some instances, Candida is a temporary repository for a species until ascosporulation is observed and it can be placed in a teleomorphic genus. Some species are represented by only a single strain. A number of Candida species have been found to sporulate, either independently or when strains are mixed and mating types are revealed. The list of Candida species presented here includes some species that have teleomorphic counterparts. Some are often isolated as single mating types, such as C. guilliermondii and C lusitaniae, or others are well-known species whose relationship to the teleomorph was established by DNA reassociation (C krusei, C sorbosa). In addition, there are other species that were at one time included in Candida, but because they were found to sporulate are not listed in Candida, but in the appropriate ascomycetous genera. These species (anamorph/teleomorph) are crossreferenced in the index. When sporulation is elusive, molecular techniques can be used to resolve relationships. DNA-DNA reassociation and ribosomal RNA gene sequencing are techniques that have been employed to determine anamorphic/teleomorphic relationships, as well as conspecificity of Candida species and proper identity of strains within a species. These techniques have been particularly usefiil in resolving the correct status of a number of Candida species. Some species that were published while this chapter was being prepared are not included, namely: C fragi Suzuki, Nakase & Kukazawa (1991), C pseudoglaebosa Suzuki & Nakase (1993), C sojae Nakase, Suzuki, Takashima, Miyakawa, Kagaya, Fukazawa & Komagata (1994b), C stellimalicola Suzuki, Nakase & Komagata (1994), C. cellulolytica and C. fukuyamaensis Nakase, Suzuki, Takashima, Hamamoto, Hatano & Fukui (1994c), and C. dubliniensis Sullivan, Westerneng, Haynes, Bennett & Coleman (1995). C. fragi has physiological properties similar to C sake, C oleophila and C. natalensis, but it is distinct from them on the basis of DNA relatedness, electrophoretic enzyme patterns and proton magnetic

573

resonance (PMR) spectra of the cell wall mannans. C. sojae, a species isolated from an extraction process of water-soluble substances of defatted soybean flakes, has some similarity to C. albicans and C. tropicalis. However, it is distinguished from these species on mol% G + C, electrophoretic enzyme patterns and the PMR spectra of cell wall mannans. C. stellimalicola, a species isolated from Ma-Fueng (star apple) in Thailand, shows some similarity to C diversa, C silvae and C. karawaiewii. It was distinguished from these species by DNA reassociation, proton magnetic resonance spectra of the cell wall mannans and serological characteristics of cell surface antigens. C cellulolytica and C. fukuyamaensis are both cellulolytic yeasts isolated from natural habitats by enrichment techniques. The latter species has some similarities with C. famata, C guilliermondii and C salmanticensis, but can be differentiated from them on various criteria. C dubliniensis was recently described for a number of strains isolated from HIV-infected patients and uninfected persons. It has characteristics that resemble C. albicans. It is germ-tube positive and produces chlamydospores in abundance. Its physiological profile is nearly identical to that of C albicans. Sullivan et al. (1995) employed several molecular biological techniques to compare strains of this species with C albicans strains. C albicans serotype A and serotype B strains and the type strain and one other strain of C stellatoidea were included in the study. The results showed that the strains of C. dubliniensis were distinct from the C. albicans strains. See the comments section of C albicans for more information. Species of uncertain affiliation: C santamariae var. membranifaciens and C rignihuensis were previously included in C. santamariae and C oleophila, respectively. C molischiana was previously considered the anamorph of Pichia capsulata. However, this relationship is not supported by ribosomal RNA gene sequence comparisons (Kurtzman, personal communication). Also, the status of Saccharomyces pleomorphus, a strain previously considered a synonym of C lodderae, is questioned because the type strain of C lodderae was found to be conspecific with C uiswanathii. Species complexes: Some species are heterogeneous. They include unrelated strains whose relationships have not been resolved. C. sake and C oleophila are excellent examples. C. intermedia, C. rugosa, C tenuis and C. zeylanoides show much variability and are possibly heterogeneous. Others, such as C. parapsilosis and C haemulonii have been shown to have two or more distinct genomic types (refer to the comments section of the species descriptions for more information).

574

Vc. Descriptions of anamorphic ascomycetous genera and species

65. Geotrichum Link:Fries G.S. de Hoog, M.Th. Smith and E. Gueho Diagnosis of the genus Colonies are white, farinose or hairy, usually dry, and consist of true hyphae which disarticulate into rectangular arthroconidia. Additionally, mostly sympodially produced conidia may be present. Budding is absent. Chlamydospores and endoconidia may be present. Septa have micropores. Fermentation is mostly absent. Nitrate is not assimilated. Extracellular starch is not produced. Diazonium blue B reaction is negative. Teleomorph genera: Dipodascus, Galactomyces. Type species Geotrichum candidum Link:Fries Species accepted 1. Geotrichum 2. Geotrichum 3. Geotrichum 4. Geotrichum 5. Geotrichum 6. Geotrichum 7. Geotrichum 8. Geotrichum p. 188 9. Geotrichum 10. Geotrichum 11. Geotrichum

candidum Link:Fries (1832): see Galactomyces geotrichum, p. 210 capitatum (Diddens & Lodder) von Arx (1977): see Dipodascus capitatus, p. 186 citri-aurantii (Ferraris) E.E. Butler (1988): see Galactomyces citri-aurantii, p. 209 clavatum de Hoog, M.Th. Smith & Gueho (1986) decipiens (L. Tulasne & R. Tulasne) W. Gams (1983): see Dipodascus armillariae, p. 184 fermentans (Diddens & Lodder) von Arx (1977) fragrans (Berkhout) Morenz ex Morenz (1964) ingens (van der Walt & van Kerken) de Hoog, M.Th. Smith & Gueho (1997): see Dipodascus ingens, klebahnii (Stautz) Morenz (1964) ludwigii (E.G. Hansen) Fang, Cheng & Chu (1966): see Dipodascus magnusii, p. 189 sericeum (Stautz) de Hoog, M.Th. Smith & Gueho (1986): see Dipodascus ovetensis, p. 190

Physiological and morphological key to species of Geotrichum, Dipodascus and Galactomyces See Table 62. 1. 2(1). 3(2). 4(3). 5(3). 6(2). 7(6).

a b a b a b a b a b a b a

D-Xylose assimilated —> 2 D-Xylose not assimilated -^ 11 Cellobiose assimilated -^ 3 Cellobiose not assimilated -^ 6 Salicin assimilated -^ 4 Salicin not assimilated -^ 5 D-Glucitol assimilated D-Glucitol not assimilated L-Sorbose assimilated L-Sorbose not assimilated Maltose assimilated Maltose not assimilated -^ 7 Growth in vitamin-free medium

b a b 9(8). a b 10(9). a

Absence of growth in vitamin-free medium Mannitol assimilated -^ 9 Mannitol not assimilated Growth at 37°C Absence of growth at 3 7 ^ -^ 10 Ribitol assimilated

b 11(1). a b 12(11). a b

Ribitol not assimilated Sucrose assimilated Sucrose not assimilated —^ 12 Cellobiose assimilated Cellobiose not assimilated -^ 13

8(7).

Geotrichum fermentans: Dipodascus spicifer: Dipodascus macrosporus: Dipodascus armillariae: Dipodascus geniculatus:

p- 576 p- 191 p- 189 p- 184 p- 187

Galactomyces geotrichum: Geotrichum klebahnii:

p- 210 p- 578

Galactomyces reessii: Dipodascus australiensis:

p- 212 p- 185

Dipodascus aggregatus: Galactomyces citri-aurantii: Dipodascus albidus: Dipodascus magnusii:

p- 182 p- 209 p- 183 p- 189

Geotrichum clavatum:

p. 575

-^ 8

575

65. Geotrichum Link.Fries / G.S. de Hoog, M.Th. Smith and E. Gueho 13(12). a b 14(13). a b 15(14). a b 16(14). a b 17(16). a b

Culture odor strongly fruity Culture odor insignificant or faintly fruity —> 14 D-Glucitol assimilated -» 15 D-Glucitol not assimilated ^ 1 6 Citrate assimilated Citrate not assimilated Hyphae markedly constricted at septa Hyphae not markedly constricted at septa —> 17 Growth at 37°C Absence of growth at 37°C

Geotrichum fragrans:

p. 577

Dipodascus tetrasperma: p. 192 Dipodascus ambrosiae: p. 184 Dipodascus ingens: p. 188 Dipodascus capitatus: p. 186 Dipodascus ovetensis: p. 190

Table 62 Key characters of species in the genera Geotrichum, Dipodascus and Galactomyces Assimilation^

Species Sor

Sue

Mai

Cel

Xyl

Rbl

Growth'' Mtl

Gk

Sal

Cit

Vfree

37T

~

-

+ +

+

-

-

+

V

+

+

~

+

+

-

+

Geotrichum clauatum

+

+

G. fermentans

+

+/w

G. fragrans

+

Septal constrict'

+

G. klebahnii Dipodascus

Fruity odor'^

aggregatus

+ +

D. albidus D. ambrosiae

V

D. armillariae

-

D. australiensis

+

+

D. capitatus

V

-

D. geniculatus

+

+

D. ingens

V

-

D. macrosporus

+

+

D. magnusii

+

+

D. ouetensis

V

~

D. spicifer

+ +

+

+

+

G. geotrichum

+

+

G. reessii

+

+

D. tetrasperma Galactomyces aurantii

citri-

V

-

V

-

+

+

-

V

+

V

V

_

V

• +

-

^ Abbreviations: Sor, L-sorbose; Sue, sucrose; Mai, maltose; Cel, cellobiose; Xyl, D-xylose; Rbl, ribitol; Mtl, D-mannitol; Git, D-glucitol; Sal, salicin; Cit, citrate. ^ Abbreviations: Vfree, in vitamin-free medium; 37''C, at 37''C. ^ Culture produces a strong fruity odor. ^ Hyphae are markedly constricted at the septa.

Systematic discussion of the species 65.1. Geotrichum candidum Link:Fries (1832) See under teleomorph Galactomyces geotrichum: p. 210.

65.4. Geotrichum clavatum de Hoog, M.Th. Smith & Gueho (1986)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22T, colonies are 1565.2. Geotrichum capitatum (Diddens & Lodder) 17 mm in diameter, glassy-white, flat, smooth and tough. von Arx (1977a) Expanding hyphae are in loose bundles and break up into See under teleomorph Dipodascus capitatus: p. 186. rectangular cells of variable size, (2.8-4.0)x(6-20)|i-m. Terminal parts of hyphae may swell and become thick65.3. Geotrichum citri-aurantii (Ferraris) E.E. walled; the widest cell at the apex measures 8 x 11 [lim Butler (Butler et al. 1988) See under teleomorph Galactomyces citri-aurantii: p. 209. (Fig. 274).

Vc. Descriptions of anamorphic ascomycetous genera and species

576

(CBS 2465), from human patient with asthma, Orie, Netherlands. Type strain: CBS 425.71. Comments: This is one of the arthroconidial opportunists involved in human systemic mycoses, particularly in connection with pulmonary disorders. For a discussion on emerging systemic opportunists, see under Dipodascus capitatus. 65.5. Geotrichum decipiens (L. Tulasne & R. Tulasne) W. Gams (1983) See under teleomorph Dipodascus armiUariae: p. 184. 65.6. Geotrichum fermentans (Diddens & Lodder) von Arx (1977a) Synonyms: Trichosporon fermentans Diddens & Lodder (1942) Fermentotrichon fermentans (Diddens & Lodder) Novak & Zsolt (1961)

Fig. 274. G. clavatum, CBS 576.82, 425.71. MEYA, 22T. Branching pattern arthroconidia and swollen terminal cells.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

-

n

_ -

A'^-Acetyl-D-g lucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-g lucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + +

_ _ _ _ +

_ V

+ +

-

n

_ -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37T + Arbutin + Co-Q: Not determined. Mol% G + C: 31.1-33.2, CBS 425.71, CBS 576.82 {T^: de Hoog et al. 1986).

Origin of the strains studied: CBS 425.71, from human lung tissue, Ahearn, Atlanta, U.S.A.; CBS 576.82

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22''C, colonies are 35^0 mm in diameter, whitish, moist and somewhat raised, with straight and sharp margins that later become fimbriate margins. Expanding hyphae are straight, initially remotely septate, later every 20-60 |im; main branches are 5-7 ^m wide, lateral branches are 2.5^.0 ^m wide, and disarticulate into arthroconidia, (2.8-4.0) x (8-30) |im. Hyphae that form later often remain intact and develop short grape-like branches composed of ellipsoidal cells (Fig. 275). Fermentation: Glucose Galactose Sucrose Maltose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose

Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + -

Lactose Raffinose Trehalose

n

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + +

V

-

+ +

-

+/

-

+ + +

-

n

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37°C v Arbutin + Co-Q: Not determined. Mol% G + C: 42, CBS 439.83 {T^: Gueho 1979), 46.1^6.2, CBS 409.34, CBS 439.83 (BD: Gueho et al. 1984).

65. Geotrichum Link:Fries / G.S. de Hoog, M.Th. Smith and E. Gueho

577

4-7 |im wide, and mostly without secondary branching. Hyphae disarticulate into rectangular arthroconidia, (47)x(10-18)|im, often with some annellations at one or both ends, and they are intermingled with smaller conidia from lateral branches. Endoconidia, chlamydospores and rhizoids may be present (Fig. 276). Fermentation: Glucose Galactose Sucrose Maltose

+ V

-

Lactose Raffinose Trehalose

Assimilation:

Fig. 275. G. fermentans, CBS 2529. MEYA, 22°C. Expanding hyphae, blasto- and arthroconidia.

Origin of the strains studied: CBS 439.83 (CBS 2529, NRRL Y-1492, ATCC 10675) from wood pulp, Rennerfelt, Sweden; from wood pulp mill (1); from tanned sheep skin (1). Type strain: CBS 439.83. Comments: One of the main characteristics of this species is the relatively long and narrow conidia which do not inflate after detachment, and the local, grape-like lateral branchlets. 65.7. Geotrichum fragrans (Berkhout) Morenz ex Morenz (1964) Synonyms: Oospora fragrans Berkhout (1923) Cylindrium fragrans (Berkhout) Burns (1933) Endomyces lactis (Fresenius) Windisch var. fragrans (Berkhout) Windisch(1951) Oidium suaueolens Krzemecki (1913) Oospora gigas Smit & Meyers (1928) Geotrichum magnum Saez (1968a) Geotrichum fici S. Goto, Yamakawa & Yokotsuka (1975b) Geotrichum rectangulatum S. Goto, Yamakawa & Yokotsuka (1975b)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 25-30 mm in diameter, whitish, tough, hispid with creeping hyphal fascicles, and produce a strong fruity odor. Expanding hyphae are straight and stiff, unilaterally branched at acute angles, main branches are 7-12 |im wide, lateral branches are

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

n

-

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

n

-

n + +

V V

-

+ + V

-

n

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37T Arbutin Co-Q: Not determined. Mol% G + C: 42.2-443, 5 strains (T^: de Hoog et al. 1986).

v

Origin of the strains studied: CBS 140.25, type strain of Oospora gigas, from fruit juice of Arenga, Smit; CBS 152.25, type strain of Oidium suaueolens, from water, Krzemecki; CBS 126.76, type strain of Geotrichum rectangulatum, from oily debris. Goto, Japan; CBS 111.16, type strain of G. fici, from fig (Ficus sp.) Goto, Japan; palm wine (1); mash of maize (1); from human pulmonary infections (2). Type strain: CBS 152.25. Comments: Oidium suaueolens is the oldest epithet available for this taxon, but the combination Geotrichum suaueolens had already been made for a species now known as Moniliella suaueolens. The well-known name Geotrichum fl-agrans can therefore be maintained. De Hoog et al. (1986) found that several strains of the species show a very low degree of DNA/DNA reassociation, which would point to taxonomic heterogeneity. Thus far no usable key features are available to distinguish these sibling taxa. The species is regularly found in nutrientrich, liquid substrates, particularly in industrial waste water.

Vc. Descriptions of anamorphic ascomycetous genera and species

578

°ooO

Fig. 276. G. fragrans, various CBS strains. MEYA, 22''C. Expanding hyphae with penicillate arthroconidia and conidia with annellated zones.

Fig. 277. G. klebahnii, various CBS strains. MEYA, 22''C. Expanding hyphae and arthroconidia.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose 65.9. Geotrichum klebahnii (Stautz) Morenz (1964) Lactose Synonyms: Melibiose Trichosporon klebahnii Stautz (1931) Raffinose Endomyces lactis (Fresenius) Windisch var. klebahnii (Stautz) Windisch Melezitose (1951) Inulin Trichosporon penicillatum do Carmo-Sousa (1965) Soluble starch Geotrichum penicillatum (do Carmo-Sousa) von Arx (1977a) D-Xylose Growth on 4% malt extract/0.5% yeast extract L-Arabinose agar: After 10 days at 20-22°C, colonies are 25-30 mm D-Arabinose D-Ribose in diameter, glassy-white, moist, somewhat raised and L-Rhamnose slightly veined, with margins that arefimbriate,and finally D-Glucosamine

65.8. Geotrichum ingens (van der Walt & van Kerken) de Hoog, M.Th. Smith & Gueho (1997a) See under teleomorph Dipodascus ingens: p. 188.

hairy. Expanding hyphae are septate every 40-80 |im, 3.5-5.0 ^im in width, with slight differentiation of main and lateral branches. Hyphae locally disarticulate into cubic arthroconidia measuring (2.8-3.2)x(4.5-9.0) [xm (Fig. 277). Fermentation:

Glucose Galactose Sucrose Maltose

+ w/-

-

Lactose Raffinose Trehalose

+ + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + v + + + + v n +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 37*'C Arbutin Co-Q: Not determined. Mol% G + C: 40.1^0.7, CBS 179.30, CBS 627.74 (BD: Gueho et al. 1984).

Origin of the strains studied: CBS 179.30, from slime flux of yew {Taxus baccata), Stautz; CBS 627.74 (CBS 5586, ATCC 18019), type strain of T. penicillatum, from

65. Geotrichum Link:Fries / G.S. de Hoog, M.Th. Smith and E. Gueho

slime flux of elm (Ulmus sp.), Phaff; from wood pulp (1); from sewage filter (1). Type strain: CBS 179.30. Comments: The occurrence of this species in slime flux of trees is striking. It is probably selected by high concentrations of sugars. It was also reported from corn pulp (Glanser and Ban 1983) and sugar cane bagasse (Pou et al. 1985). G. klehahnii is close to G. clavatum, but differs in growth with D-xylose. The ecological preferences of the two species are markedly different; G. clavatum is a human pathogen. An additional species that can be found in tree exudates is the Geotrichum

579

anamorph of Dipodascus australiensis. The latter species is non-fermentative and cannot grow without vitamins. G. ludwigii from oak slime flux has a much larger micromorphology 65.10. Geotrichum ludwigii (E.C. Hansen) Fang, Cheng & Chu (1966) See under teleomorph Dipodascus magnusii: p. 189. 65.11. Geotrichum sericeum (Stautz) de Hoog, M.Th. Smith & Gueho (1986) See under teleomorph Dipodascus ouetensis: p. 190.

Vc. Descriptions of anamorphic ascomycetous genera and species

580

66. Kloeckera Janke M.Th. Smith Diagnosis of the genus Asexual reproduction is by bipolar budding in basipetal succession on a narrow base. Cells are apiculate, ovoidal to long-ovoidal or elongate. Pseudohyphae are absent, or if present, rarely well-developed. Ascospores are not produced. Glucose is fermented. Nitrate is not assimilated. Inositol and pantothenate are required for growth. Acetic acid is not produced. Diazonium blue B reaction is negative. The teleomorphic genus is Hanseniaspora. Type species Kloeckera apiculata (Reess emend. Klocker) Janke Species accepted \. Kloeckera 2. Kloeckera 3. Kloeckera 4. Kloeckera 5. Kloeckera 6. Kloeckera 7. Kloeckera

africana (Klocker) Janke (1928): see Hanseniaspora vineae, p. 219 apiculata (Reess emend. Klocker) Janke (1928): see Hanseniaspora uuarum, p. 217 apis Lavie ex M.Th. Smith, Simione & S.A. Meyer (1977): see Hanseniaspora guilliermondii, p. 215 corticis (Klocker) Janke (1928): see Hanseniaspora osmophila, p. 216 japonica Saito & Ohtani (1931): see Hanseniaspora valbyensis, p. 218 javanica (Klocker) Janke (1928): see Hanseniaspora occidentalis, p. 215 lindneri (Klocker) Janke (1928)

Key to species See Table 63. 1. 2(1). 3(2). 4(3). 5(4). 6(4).

a b a b a b a b a b a b

Growth at 2>TC Growth absent at 37°C -^ 2 Sucrose fermented Sucrose not fermented -^ 3 2-Keto-D-gluconate assimilated 2-Keto-D-gluconate not assimilated —> 4 Growth absent with 0.01% cycloheximide -^ 5 Growth present with 0.01% cycloheximide -^ 6 Growth at 34''C Growth absent at 34°C Growth at 30°C Growth absent at 30"C

K. apis:

p. 581

K. jauanica: p. 581 K. apiculata: p. 580

K. africana: K. corticis: K. lindneri: , K. japonica:

p. p. p. p.

580 581 581 581

Table 63 Key characters of species in the genus Kloeckera Species

Kloeckera africana K. apiculata K apis K corticus K. japonica K jauanica K. lindneri

Growth

Sucrose fermentation

Assimilation of 2-keto-D-gluconate

-

-

-

+ +

+ +

-

-

+

-

Systematic discussion of the species 66.1. Kloeckera africana (Klocker) Janke (1928) See teleomorph Hanseniaspora vineae van der Walt & Tscheuschner: p. 219.

With 0.01% cycloheximide

+

-

+

At 30°C

At 34°C

+ + + +

+ n +

-

+ +

-

n n

At 37''C

+

-

66.2. Kloeckera apiculata (Reess emend. Klocker) Janke (1928) See teleomorph Hanseniaspora uuarum (Niehaus) Shehata, Mrak & Phaff: p. 217.

66. Kloeckera Janke / M. Th. Smith

581

66.3. Kloeckera apis Lavie ex M.Th. Smith, Simione Additional assimilation tests and other growth & S.A. Meyer (1977) characteristics: 0.01% Cycloheximide + See teleomorph Hanseniaspora guilliermondii Pijper: 2-Keto-D-gluconate Starch formation Growth at 3 4^0 p. 215. 66.4. Kloeckera corticis (Klocker) Janke (1928) See teleomorph Hanseniaspora osmophila (Niehaus) Shehata, Mrak & Phaff: p. 216.

Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strain studied: CBS 285, soil, Java, Kufferath. Type strain: CBS 285, isolated by Kufferath. Comments: Kloeckera lindneri shows poor growth in 66.5. Kloeckera japonica Saito & Ohtani (1931) the media used for growth tests. However, growth is See iQlQomoxxi^ Hanseniaspora valhyensis Klocker: p. 218. stimulated by the addition of yeast autolyzate to the media. 66.6. Kloeckera javanica (Klocker) Janke (1928) See teleomorph Hanseniaspora occidentalis M.Th. Smith: Comments on the genus p. 215. In 1978, Meyer et al. correlated the six anamorphic 66.7. Kloeckera lindneri (Klocker) Janke (1928) Kloeckera species with six teleomorphic species in Synonym: Hanseniaspora from comparisons of DNA relatedness. Pseudosaccharomyces lindneri Klocker (1912b) The status of K. lindneri was not settled by these Growth in glucose-yeast extract-peptone water: authors since the type strain was not available during After 2 days at 25''C, cells are apiculate, ovoidal or their study. However, from the physiology, this species elongate, (2.0-4.5)x (4.0-9.5) jim, single or in pairs. does not appear to be a synonym of any of the known Reproduction is by bipolar budding. Sediment is present. species of Hanseniaspora. This possibility is supported After one month a thin ring is formed. by the rDNA sequence data obtained by Boekhout et al. Growth on glucose-yeast extract-peptone agar: (1994) in a study on the phylogenetic relationships After one month the streak culture is white to cream- of Hanseniaspora, Kloeckera and other genera. These colored, and smooth and glossy; in cross section there is authors suggested that K. lindneri may represent an anamorph of a Hanseniaspora species closely related to a raised center and a flat periphery. H. uvarum, H guilliermondii and H ualbyensis. Yamada Dalmau plate cultures on potato agar: Pseuet al. (1993) determined the phylogenetic relationships of domycelium is absent. species of the apiculate yeast genera Wickerhamia and Fermentation: Kloeckera on the basis of the partial sequences of 18S Glucose + Lactose and 26S ribosomal RNAs. The single species Wickerhamia Galactose Raffinose fluorescens was found to be phylogenetically separate Sucrose Trehalose Maltose from species of Kloeckera and Hanseniaspora. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

V

-

n

-

582

Vc. Descriptions of anamorphic ascomycetous genera and species

67. Lalaria R.T. Moore R.T. Moore Introduction The order Taphrinales is dimorphic: the teleomorphic phase is myceUal and obUgately parasitic on a variety of plant hosts while the anamorphic phase is saprobic and yeastlike. The holomorphic biosystematics of these fungi - the development of biological species concepts for them - has been impeded by the lack of anamorph names for their yeast phases. Only three of the seven genera are available from major commercial culture collections: Protomyces, Protomycopsis and Taphrina. Most of the Taphrina species were isolated by Mix in the course of his many years of study of the genus. Mix (1954) examined 74 isolates, representing 26 species and 55 host forms for their ability to use 32 different carbon compounds. All isolates gave a common response to 12 compounds. All but the two isolates of T. polystichi used xylose and all but the isolates of T. polystichi and the isolate of T. nana used succinic acid. The isolates exhibited various responses to 18 other compounds. In an earlier paper, Mix (1953) examined the ability of these isolates to utilize nitrogen compounds and found that they could all utilize urea and asparagine. Little serious attention has been given subsequently to the systematic characterization of these yeast forms, and to providing them with standard descriptions. Despite their economic importance they have been largely ignored by plant pathology and although Mix (1935) said that the yeast-phase should be common on plant surfaces and probably in the soil, there is no mention of these species in this literature (e.g., do Carmo-Sousa 1969a, Last and Price 1969, Preece and Dickinson 1971, Phaff and Starmer 1987). Moore (1990), recognizing that part of the problem was the lack of a name to identify the anamorph phase, proposed the name Lalaria as an omnium gatherum for all the form-species in the order. He recast Mix's data, originally set out in paragraph style, in tabular form. Despite the datedness and, by current standards, incompleteness of these data, they are still the only comprehensive information that we have on these forms. Consequently, the recognized species of Lalaria are, at present, all anamorphs of species of Taphrina. Although they are defined strictly on the basis of small differences on a limited number of physiological tests, they do parallel the respective teleomorphs, indicating that they probabably are taxonomically distinct. Diagnosis of the genus Colonies are pinkish or sometimes yellowish due to carotenoid pigments; budding is holoblastic. The species are diazonium blue B and urease negative; species assimilate glucose, maltose, sucrose, trehalose, melezitose, inulin, urea and asparagine, but not lactose, L-rhamnose, erythritol, inositol, or ammonium acetate. They do not ferment glucose, form extracellular starch-like compounds and do not require thiamine. They have Co-Q 10, and a temperature maximum of 28°C, though many isolates grow poorly above about 20''C. Type species Lalaria populina R.T. Moore Species accepted 1. Lalaria americana R.T. Moore (1990) Teleomorph: Taphrina americana Mix Host: Betula fontinalis Sargent Origin: Mix (1954), no. 1 (CBS 331.55) 2. Lalaria caerulescens R.T. Moore (1990) Teleomorph: Taphrina caerulescens (Montague & Desmazieres) Tulasne Host: Quercus alba L. Origin: Mix (1954), no. 5 (CBS 351.35) 3. Lalaria carnea R.T. Moore (1990) Teleomorph: Taphrina carnea Johanson Host: Betula intermedia Thomas Origin: Mix (1954), no. 21 (CBS 332.55, MUCL 30956) 4. Lalaria cerasi R.T. Moore (1990) Teleomorph: Taphrina cerasi (Fuckel) Sadebeck Host: Prunus avium L. Origin: Mix (1954), nos. 22, 23, 24 (CBS 275.28)

67. Lalaria R. T. Moore / R.T. Moore

5. Lalaria coccinea R.T. Moore (1990) Teleomorph: Taphrina caerulescens (Montagne & Desmazieres) Tulasne Host: Quercus coccinea Miinch Origin: Mix (1954), no. 7 (CBS 333.55) 6. Lalaria communis R.T. Moore (1990) Teleomorph: Taphrina communis (Sadebeck) Giesenhag Host: Prunus americana Marsh Origin: Mix (1954), nos. 27, 28, 29 (CBS 352.35) 7. Lalaria confusa R.T. Moore (1990) Teleomorph: Taphrina confusa (Atkinson) Giesenhag Host: Prunus uirginiana L.; P a var. demissa Torrey Origin: Mix (1954), no. 39 (CBS 375.39) 8. Lalaria dearnessii R.T. Moore (1990) Teleomorph: Taphrina dearnessii Jenkins Host: Acer rubrum L. Origin: Mix (1954), no. 40 (CBS 334.55) 9. Lalaria deformans R.T Moore (1990) Teleomorph: Taphrina deformans (Berkeley) Tulasne Host: Prunus communis L.; P persica L. Origin: Mix (1954), nos. 41, 42 (CBS 356.35, MUCL 30957) 10. Lalaria farlowii R.T Moore (1990) Teleomorph: Taphrina farlowii Sadebeck Host: Prunus serotina Ehrhart Origin: Mix (1954), nos. 45, 46 (CBS 376.39) 11. Lalaria flauorubra R.T Moore (1990) Teleomorph: Taphrina flauorubra Ray Host: Prunus besseyi Bailey Origin: Mix (1954), nos. 47, 48 (CBS 377.39) 12. Lalaria johansonii R.T. Moore (1990) Teleomorph: Taphrina johansonii Sadebeck Host: Populus tremuloides Michaux Origin: Mix (1954), nos. 49, 50 (CBS 378.39) 13. Lalaria letifera R.T. Moore (1990) Teleomorph: Taphrina letifera (Peck) Saccardo Host: Acer spicatum Lamarck Origin: Mix (1954), no. 51 (CBS 335.55) 14. Lalaria nana R.T. Moore (1990) Teleomorph: Taphrina nana Johanson Host: Betula nana L. Origin: Mix (1954), no. 52 (CBS 336.55) 15. Lalaria polystichi R.T. Moore (1990) Teleomorph: Taphrina polystichi Mix Host: Polystichum acrostichoides (Michaux) Schott Origin: Mix (1954), nos. 53, S4 (CBS 379.39) 16. Lalaria populi-salicis R.T. Moore (1990) Teleomorph: Taphrina populi-salicis Mix Host: Populus trichocarpa Torrey & Gray Origin: Mix (1954), no. 58 (CBS 419.54) 17. Lalaria populina R.T. Moore (1990) Teleomorph: Taphrina populina Fries Host: Populus nigra L. Origin: Mix (1954), nos. 55, 56 (CBS 337.55, MUCL 30958) 18. Lalaria pruni-subcordatae R.T. Moore (1990) Teleomorph: Taphrina pruni-subcordatae (Zeller) Mix Host: Prunus subcordata Bentham Origin: Mix (1954), no. 62 (CBS 381.39)

58

584

Vc. Descriptions of anamorphic ascomycetous genera and species

19. Lalaria purpurascens R.T. Moore (1990) Teleomorph: Taphrina purpurascens Robinson Host: Rhus copallina L. Origin: Mix (1954), no. 63 (CBS 338.55) 20. Lalaria robinsoniana R.T. Moore (1990) Teleomorph: Taphrina robinsoniana Giesenhag Host: Alnus rugosa (Du Roi) Sprengel; A. serrulata (Alton) Willdenow Origin: Mix (1954), nos. 64, 67, 69 (CBS 382.39, CBS 383.39) 21. Lalaria tosquinetii R.T. Moore (1990) Teleomorph: Taphrina tosquinetii (Westendorp) Tulasne Host: Alnus glutinosa Gaertner Origin: Mix (1954), nos. 74, 75 (CBS 276.28) 22. Lalaria ulmi R.T. Moore (1990) Teleomorph: Taphrina ulmi (Fuckel) Johanson Host: Ulmus rubra Muhlenberg Origin: Mix (1954), nos. 77, 78 (CBS 420.54) 23. Lalaria uirginica R.T. Moore (1990) Teleomorph: Taphrina uirginica Sadebeck Host: Ostrya virginiana (Miller) K. Koch Origin: Mix (1954), no. 79 (CBS 340.55) Key to isolates The following key is to all isolates studied by Mix (some of which have been recognized in Lalaria). This key points up the fact that several hosts have species complexes, particularly Quercus and Betula. The three isolates identified as T. betulina Rostrup (nos. 2 ^ ) were originally separate species of Taphrina: respectively, T betulina and T lapponica Juel on Betula intermedia Thomas (one of which is CBS 417.54) and T turgida on B. pendula Roth; the original classification is supported by the fact that they key out separately. The 16 isolates of T caerulescens on Quercus (nos. 5-20) key out to 14 taxa. In the traditional practice of yeast taxonomy, each terminal entry might be considered a separate species. Only the two species for which cultures are available (L. coccinea and L. caerulescens) have been accepted in Lalaria (Moore 1990). This key has been constructed using Mix's (1954) data. Key to the anamorphs of Taphrina and species of Lalaria: {Host} species and numbers are from Mix (1954). See Table 64. 1.

a b 2(1). a b 3(2). a b 4(3). a b 5(4). a b 6(4). a b 7(6). a b 8(3). a b 9(8). a b 10(9). a b 11(9). a b 12(8). a b 13(12). a b 14(2). a b

Galactose assimilated -^ 2 Galactose not assimilated -^ 28 D-Ribose assimilated —> 3 D-Ribose not assimilated -^ 14 Galactitol assimilated -^ 4 Galactitol not assimilated —> 8 Soluble starch assimilated -^ 5 Soluble starch not assimilated -^ 6 Melibiose assimilated Melibiose not assimilated Ethanol assimilated Ethanol not assimilated -^ 7 Citric acid assimilated Citric acid not assimilated D-Mannitol assimilated -^ 9 D-Mannitol not assimilated —> 12 Raffinose assimilated -^ 10 Raffinose not assimilated -^ 11 Salicin assimilated Salicin not assimilated Salicin assimilated Salicin not assimilated L-Sorbose assimilated -^ 13 L-Sorbose not assimilated Melibiose assimilated Melibiose not assimilated L-Arabinose assimilated -^ 15 L-Arabinose not assimilated -^ 23

L. confusa T. caerulescens {Quercus velutina]: 18/19 T. caerulescens {Q. maxima}: 13/14 T. caerulescens [Q. palustris}: 16 T. caerulescens {Q. bushii]: 6

L.

pruni-subcordatae L. communis L. uirginica T. cerasi {Prunus pennsyluanica): 25/26 L nana T. communis {Prunus sp.}: 36/37 T. communis {PK nigra}: 35

Table 64 Key characteristics of species assigned to Lalaria

Species

Assimilation a Gal

Cel -

Me1

Raf

SS

Xyl

Ara

Rbo

Etb

Ureaseb

Gly

Rbi

+

-

W

+ +

+ +

+

L. curnea

+ +

L. cerusi

+

+

-

L. coccineu

+ +

L. dearnessii

+ + + +

L. deformans

-

+

L. farlowii

+

L. jiauorubra

+

+ +

L. johansonii

+ +

+ + + + + + + + +

Lalaria americana

L. caerulescens

L. communis L. confusa

L. letifera L. nana

~

~

+ +

+ + +

L. polystichi

-

-

L. populi-salicis

+

L. populina

+

+ +

L. pruni-subcordutue

+

+

L. purpurascens

-

+ + + + +

L. robinsoniunu

+

L. tosquinetii

-

L. ulmi

+ +

L. uirginica

+ + + +

+ +

Gat

Mnt

Glt

Sal

sue

-

-

+ +

+ +

-

+ +

+

W

+ + + ~

+

-

+

-

W

~

+ + + + + + + + + +

+ + +

+ +

+

+

+ +

W

+ + +

+

+

+ + + + + + +

-

W

+

+

W

W

+

-

W

-

W

-

-

-

-

+

-

~

~

+ +

+ +

W

+ + +

~

W

~

-

-

+ +

+ +

+ + +

+ + +

W

+ + + W

+

-

+ + + +

+

+ +

~

Cit

+ + + +

+

~

+

+ +

+

+

+ +

+

+

+

+ + +

+ +

-

10

+

+ -

10

Y

L

a 3

~

10

-

+ + -

+

Data from Mix (1953) (for NO,), and Mix (1954) (others). Abbreviations: Gal, galactose; Sor, L-sorbose; Cel, cellobiose; Mel, melibiose; Raf, raffinose; SS, soluble starch; Xyl, o-xylose; Ara, L-arabinose; Rho, o-ribose; Eth, ethanol; Gly, glycerol; Rbi, ribitol; Gat, galactitol; Mnt, o-mannitol; Glt, D-glucitol; Sal, salicin; SUC,succinic acid; Cit, citric acid; NO3, nitrate. Data from Moore and Flinn (1991) (spp. nos. 3, 17). Data from Yamada et al. (1983) (sp. no. 4), Yamada et al. (1987b) (sp. no. 9), and Moore and Flinn (1991) (spp. nos. 3, 17). a

h

+

-

-

CoQ'

586 15(14; a b 16(15 a b 17(16 a b 18(16; a b 19(15 a b 20(19 a b 21(20; a b 22(19; a b 23(14 a b 24(23; a b 25(24 a b 26(24; a b 27(23 a b 28(2). a b 29(28; a b 30(29; a b 31(30; a b 32(31 a b 33(31 a b 34(30; a b 35(29 \. a b 36(35 a b 37(35 a b 38(37 a b 39(28 a b 40(39; a b 41(40; a b 42(41 a b 43(41 a b 44(39; a b 45(44; a b 46(45 a b 47(45; a b

Vc. Descriptions of anamorphic ascomycetous genera and species Soluble starch assimilated -^ 16 Soluble starch not assimilated -^ 19 Melibiose assimilated —> 17 Melibiose not assimilated -^ 18 Raffinose assimilated Raffinose not assimilated Nitrate assimilated Nitrate not assimilated Cellobiose assimilated -^ 20 Cellobiose not assimilated —^ 22 Melibiose assimilated Melibiose not assimilated -^ 21 Raffinose assimilated Raffinose not assimilated L-Sorbose assimilated L-Sorbose not assimilated Soluble starch assimilated -^ 24 Soluble starch not assimilated —>• 27 Glycerol assimilated ^25 Glycerol not assimilated -^ 26 L-Sorbose assimilated L-Sorbose not assimilated Citric acid assimilated Citric acid not assimilated Citric acid assimilated Citric acid not assimilated Raffinose assimilated -^ 29 Raffinose not assimilated ^39 L-Sorbose assimilated -^ 30 L-Sorbose not assimilated ^35 D-Ribose assimilated -^ 31 D-Ribose not assimilated -^ 34 L-Arabinose assimilated —^32 L-Arabinose not assimilated —^33 Melibiose assimilated Melibiose not assimilated Citric acid assimilated Citric acid not assimilated Melibiose assimilated Melibiose not assimilated Melibiose assimilated - ^ 3 6 Melibiose not assimilated - ^ 3 7 Soluble starch assimilated Soluble starch not assimilated D-Mannitol assimilated ^38 D-Mannitol not assimilated D-Ribose assimilated D-Ribose not assimilated Cellibiose assimilated -^ 40 Cellobiose not assimilated —» 44 Ribitol assimilated -^ 41 Ribitol not assimilated -^ 48 Citric acid assimilated -^ 42 Citric acid not assimilated -^ 43 Melibiose assimilated Melibiose not assimilated Ethanol assimilated Ethanol not assimilated L-Sorbose assimilated L-Sorbose not assimilated —> 45 Citric acid assimilated —^ 46 Citric acid not assimilated —^ 47 Melibiose assimilated Melibiose not assimilated L-Arabinose assimilated L-Arabinose not assimilated

T. sacchari {Acer saccharum}: 70/71 T. betulina {Betula intermedia): 3 T. ulmi {Ulmus alata}: 76 L. ulmi

L. dearnessi L. carnea T. caerulescens {Q. marilandica}: 12 T. caerulescens {Q. prinoides}: 17 L. americana

T. communis {PK angustifolia): 30/31/32 T. confusa {Pr uirginiana}: 38 T. betulina {B. pendula}: 4 T. potentillae {Potentilla arguta}: 59 T. epiphylla {Alnus incana}: 43/44 T. caerulescens {Q. nigra}: 15

T. communis {Pr maritima}: 34 L. coccinea T. communis {Pr lanata}: 33 T. caerulescens {Q. laurifolia): 10 L. purpurascens L. cerasi

L. robinsoniana L. farlowii L. flauorubra T. potentillae {Po. canadensis}: 60/61 L. letifera

T. caerulescens {Q. ilicifolia}: 8 T. caerulescens {Q. uirginiana}: 20 T. caerulescens {Q. kelloggii}: 9 L. caerulescens L deformans

T. betulina {B. intermedia}: 2 T. caerulescens {Q. macrocarpa}: 11 L. tosquinetii L. polystichi

67. Lalaria R. T. Moore / R.T. Moore 48(40). a b 49(48). a b 50(48). a b

Glycerol assimilated -^ 49 Glycerol not assimilated -^ 50 Citric acid assimilated Citric acid not assimilated Salicin assimilated Salicin not assimilated

Comments on the genus 67.1. The teleomorph phase The order Taphrinales Gaumann comprises two families (see Kurtzman 1993a; p. 172): - The Protomycetaceae (Burenia Reddy & Kramer, 2 spp.; Protomyces linger, 10+ spp., Protomycopsis Magnus, 5 spp., Taphridium de Lagerheim & Juel, 2 spp., and Volkartia Maire, 1 sp.). - The monotypic Taphrinaceae (Taphrina Fries, -95 spp.). Mixta osmundae (Nishida) Kramer, a fern parasite, was originally described in Taphrina before being given generic status in the Protomycetaceae (Kramer 1958) on the basis of the apparent similarity in spore formation and of the multinucleate condition of both the mycelium and the young fruiting structures; T. higginsii Mix, a similar parasite on a different species of Osmunda, was considered a synonym. Mixia was subsequently placed in its own family (Kramer 1987) because, unlike the rest of the Protomycetaceae, but like Taphrina, it formed a thin-walled sporocarp and the "asci" were subtended by empty stalk cells; Reddy and Kramer (1975) excluded it from the family and, in a dendrogram of possible phylogenetic relationships, placed it tentatively between Volkartia and the Mucorales. Nishida et al. (1995) have presented convincing evidence that the species is a basidiomycete: electron micrographs show ellipsoidal to fusiform sporogenous cells producing a number of stalk cells on their surface that generate spores blastically and not from within; consequently, the previously identified endospores (as ascospores and blastospores) are, in fact, formed externally. The 18S rRNA gene sequence also supports the basidiomycete interpretation. The general life-cycle of the Protomycetaceae is shown in Fig. 278b. The mycelium is multinucleate, apparently diploid, and develops thick-walled, multinucleate ascogenous cells which either spread through the host tissue or form a continuous subepidermal layer (Reddy and Kramer 1975). Meiosis in the indurated cells, the asci, produces ascospores which initiate the saprobic, yeast haplophase; only diploid cells, resulting from cell and nuclear fusion, are capable of infection; host range is restricted to Umbelliferae and Compositae. The only comprehensive monograph of Taphrina is that by Mix (1949). The approximately 95 species are classified entirely by teleomorphic characters: ascus morphology, location of the mycelium within the host tissue, histological effects on the host, and the host species. There are, however, many examples where morphological criteria overlap and host specificity is inconsistent. These fungi are all highly specialized plant parasites of limited

587

L. johansonii L. populina T. populi-salicis {Populus fremontii}: 57 L. populi-salicis

host range and are found naturally only on their respective host plants where they cause malformations of the tissues attacked, producing such disease symptoms as leaf curl, puckering, pockets, blisters, and witches' broom. Ascospores are formed only in nature and bud readily, either within the ascus or after spore discharge. There is reason to believe (Mix 1935) that propagation by budding in the anamorphic phase may continue indefinitely, the cells surviving in this fashion on various plant surfaces and probably also in the soil. Ascopores • ^ Ascus I Mei Mitl

n Yeast phase •

: (n+n) Hyphae:

Mit

a. Life cycle of the Taphrinaceae

t

Ascus I

Ascopores i ^ n Yeast phase i ^ 2n Yeast phase P/K 2n Hyphae

I

b. Life cycle of the Protomycetaceae

Fig. 278. Generalized life cycles in (a) the Taphrinaceae and (b) the Protomycetaceae. The mycelial parasitic phase is outlined; see the text for a full explanation. Abbreviations: K, karyogamy; Mei, meiosis, Mit, mitosis, P, plasmogamy.

The general life-cycle of the Taphrinaceae is shown in Fig. 278a. The parasitic, more or less coenocytic, dikaryotic mycelium grows and branches, penetrating the various cells and tissues of the host. Hyphal strands eventually break up into binucleate ascogenous cells that are often incorrectly called chlamydospores because of their somatic origin. It should also be noted that this dikaryon is more comparable to fruitbody-less ascogenous hyphae than to typical basidiomycete dikaryotic mycelia (Blanz and Unseld 1987). Karyogamy occurs within each cell and about this time the cells begin to elongate. The diploid nucleus divides mitotically while this elongation is proceeding, one daughter nucleus remaining near the base of the cell while the other moves towards the growing tip. A septum forms between the two diploid nuclei, dividing the cell into a stalk cell - whose protoplast disintegrates and leaves it empty - and an upper, ascus cell that forms eight primary ascospores (see Kramer 1960). The asci form a palisade layer above the epidermis and it is their presence which gives the surface its waxy bloom. The ascospores, or their buds, are projected from the unitunicate asci which often open by a characteristic slit. Ascospores occasionally undergo yeastlike budding while still in the ascus. Budding usually starts, however, after

588

Vc. Descriptions of anamorphic ascomycetous genera and species

Spore discharge, producing numerous uninucleate, thinwalled, secondary spores. During summer and autumn, some secondary spores form yeastlike colonies on the twigs of the host. These colonies overwinter in crevices of the bark or between bud scales. The spores germinate on the young leaves, infecting them as the buds open. Most species are homothallic but T. epiphylla Sadebeck, at least, is strictly heterothallic; a few species, e.g., T. deformans and T. pruni Tulasne, may behave as heterothallics but are usually homothallic (see Gaumann 1952). The single haploid nucleus divides once and the paired daughter nuclei then pass into the germ tube which, on penetration of the host, gives rise to the more or less coenocytic, dikaryotic mycelium. There are three types of mycelial habit (Mix 1949): (1) intercellular forms (e.g., T. deformans) develop abundant mycelium between the interior cells of leaf, stem, or fruit and subsequently form a subcuticular layer of ascogenous cells; (2) subcuticular forms (e.g., T. betulina) in which the mycelium and ascogenous cells grow only beneath the cuticle; (3) wall-inhabiting forms (e.g., T. laurencia Mix) that live entirely within the outer epidermal wall of the host. The Taphrinales are usually interpreted as simple ascomycetes and have, as a rule, been classified in the Saccharomycetes (Hemiascomycetes), which mainly comprise the ascus-forming yeasts. More recently, the Taphrinales and similar species, termed archiascomycetes, have been found to form a lineage distinct from that of euascomycetes and hemiascomycetes (Nishida and Sugiyama 1994). Historically, some authors, however, have suggested that the Taphrinales are related to the basidiomycetes. Savile (1955, 1968) asserted that ancient parasitic fungi developed on primitive plants, e.g., ferns, and he therefore considered Taphrina to be close to primitive rusts, suggesting that they had a common ancestor, which he referred to as Prototaphrina (nom. nud.). Von Arx in 1967 (see von Arx et al. 1982) classified the Taphrinales, Exobasidiales, and Ustilaginales, all of which are dimorphic and have yeastlike states, with the Saccharomycetales (Endomycetales), later (von Arx 1979b, p. 567) he stated that he "... would prefer to classify the Taphrinales next to the Sporobolomycetales and the Ustilaginales in the Ustomycetes." Raper (1968) found Savile's (1968) hypothesis attractive, saying that various characteristics of the basidiomycetes could be rationalized from such an ancestor far more easily than from more highly differentiated ascomycetous forms. Syrop and Beckett (1972) tended to agree with Savile's (1955) interpretation that Taphrina was an "ancient organism" because the ascospore-delimiting membranes appeared to arise individually from the plasmalemma rather than by the invagination of an ascal sac; but, in as much as the spindle pole bodies were not preserved in potassium permanganate prepared material, it is not possible to critically compare Taphrina ascospore formation with, respectively, holocarpic and ascocarpic

ascomycetes (see Moore 1987b). Prillinger et al. (1990c) state that the "Molecular and biochemical data (cell wall carbohydrate, 5S rRNA, ubiquinone (Q-9, Q-10), urease activity) position the Schizosaccharomycetaceae, the Protomycetaceae, and Taphrinaceae in the phylogenetic vicinity of the Basidiomycetes (e.g., genera of the Microbotryum [Ustilagoyty^o) and of the fruit-body forming Ascomycetes (e.g., Ophiostoma species)." Donk (1973b), while recognizing that some features of Taphrina were more common to the basidiomycetes, nevertheless rejected Savile's (1968) interpretation because the spores were produced endogenously. The other genera in the order (see Reddy and Kramer 1975) are poorly understood and only a few of their species are in culture. 67.2. The anamorph phase Lalaria, as presently circumscribed (Moore 1990), is the ordinal repository for the anamorphs of the Taphrinaceae Gaumann and the Protomycetaceae Gray. Although there are some 115 species in the order, only those 23 species included in the genus have available cultures, have been systematically studied, and conform to the generic description. There is a critical need for new cultures of all species, particularly those not presently in culture; these should be initiated from single ascospore isolates. I anticipate that future studies of these yeasts will find general characters suitable for establishing additional genera paralleling the teleomorphs. Protomyces inundatus Dangeard (Valadon et al. 1962), for example, has been found by Trinci and Gull (1973) to be sensitive to griseofulvin and by Ahmad (1973) to require thiamine for growth and to have the ability to assimilate ammonium acetate. There have been a number of physiological and molecular biological studies of these yeasts, some of which present conflicting evidence as to whether the isolates are more like ascomycetes or basidiomycetes. Much of this equivocal data, undoubtedly, is in the nature of the fungi themselves but some of it, at least, is a consequence of accidentally isolating basidiomycetous yeasts from host substrates and erroneously labeling them as taphrinalean anamorphs. A brief synopsis of the available data follows, in alphabetical order, under the following headings: 1. Assimilation and morphology, 2. Auxins and cytokinins, 3. Budding, 4. Buffer-soluble proteins, 5. Cell walls, 6. Fatty acid ratios, 7. Mitosis morphology, 8. Pigmentation, 9. Polyols, 10. 5S rRNA nucleotide sequences, 11. Sterols, 12. Ubiquinones, and 13. Urease. Assimilation and morphology: Verona and Rambelli (1962a,b) studied 21 isolates of Taphrina from the CBS Collection at Baarn, most of which were deposited by Mix. All of these isolates were non-fermentative and were able to assimilate glucose but not lactose. Most of the isolates were also able to assimilate xylose, maltose.

67. Lalaria R.T. Moore /R.T.

or mannitol. Among the isolates they identified one, which was labeled T californica Mix, as Cryptococcus laurentii. Von Arx et al. (1982) reported that the T. californica isolate (CBS 374.39) had morphological characters that were slightly different from other Taphrina isolates; see the subsection on sterols. All of the other 19 isolates formed starch-like compounds, grew slowly, and would not grow at temperatures above 28°C; most of these isolates could assimilate nitrate. Verona and Rambelli (1962c) reported another Taphrina isolate to be a Candida sp. They proposed Saprotaphrina nom. nud. for the anamorphs of Taphrina (Verona and Rambelli 1962a). Unfortunately, they did not designate a type species and the isolates chosen were not identified by their CBS numbers. Auxins and cytokinins: Kern and Naef-Roth (1975) examined ten species and found that all synthesized indole-3-acetic acid (lAA) and indole-lactic-acid (ILA) from tryptophan; traces of tryptophol were formed only by T. betulae and T betulina. All culture filtrates lacked tryptamin and were high in cytokinin activity due to the presence of zeatin, IPA, and a third, unidentified substance. Budding: Von Arx and Weijman (1979) comment, without documentation, that basipetal, enteroblastic budding was observed in T. californica, T deformans, T polystichi and Protomyces macrosporus as well as Symbiotaphrina buchneri and S. kochii (see section 67.3). Von Arx et al. (1982) interpreted budding in Taphrina to be rather similar to that of the apiculate yeasts and concluded that the genera Taphrina, Mixia, and Protomyces were correctly classified as hemiascomycetes. Electron micrographs of T californica (CBS 374.39) bud scars by Heath et al. (1982) clearly show the flared multiple wall layers characteristic of basidiomycete budding. Buffer-soluble proteins: Snider and Kramer (1974a,b) analysed 31 isolates of Taphrina by polyacrylamide gel electrophoresis (R\GE). They found that no one band occurred in all samples, although some fractions appeared to be characteristic of the genus in both mobility and concentration of the proteins. When isolates were grouped on the basis of host families, seven of the eight host families had percentages of mean homology. Only one family, the Polypodiaceae, was lower than the norm. When isolates were grouped according to the ascus morphologies, one out of six, which contained the species of family Polypodiaceae, was lower than the norm. These findings tend to support the concepts of conventional taxonomy, except possibly for the Taphrina species grouped in the host family Polypodiaceae. Cell walls: Petit and Schneider (1983) analysed a strain of T deformans that they isolated from spores of a single ascus on a peach leaf using a micromanipulator. Their results showed that there was a heteropolysaccharide fraction that, in four-day-old cultures, contained 54% mannose.

Moore

589

31% galactose, and 15%) rhamnose; that chitin, if present, formed no more than 2%o of the total wall composition; and that glucosamine was the only amino sugar. They stated that the biochemical profile they obtained was most like that of Schizosaccharomyces. Fatty acid ratios: Watson and Kramer (1974) analysed 19 isolates of Taphrina grouped according to host family and host genera. They found no significant patterns indicative of phylogenetic relationships. Taphrina does, however, have relatively slow growth rates and the fatty acid ratios may change during maturation. Mitosis morphology: The potential of mitotic analysis to help explain relationships among hypothetically primitive basidiomycetes was demonstrated by Heath and Heath (1976) who showed that the cowpea rust has a mitotic apparatus that shares characteristics with those of some ascomycetes. Heath et al. (1982) similarly studied isolates identified as from five species of Taphrina. They concluded that those of three species - T cerasi, T faulliana Mix, and T polystichi - were typical ascomycetes. Each of two isolates of the fourth species, T deformans, was apparently a mixed culture because, although ascomycetetype mitosis occurred in cells of both isolates, one isolate also had cells with another kind of ascomycete mitotic system characterized by elaborate and unique nucleus-associated organelles, whereas the second isolate had, in addition, cells that contained a basidiomycetous mitotic apparatus. The isolate from the fifth species, T californica, contained a typical basidiomycetous mitotic system as well as basidiomycete-type bud scars; both of these traits indicate that the isolate (CBS 374.39) is misidentified. The detailed differences that they found among the mitotic systems of the true Taphrina isolates suggests that the genus as a whole may be polyphyletic but that it is undoubtedly ascomycetous. For three of the isolates, they found a previously unreported pattern of spindle formation otherwise known only in the red algae, a finding that could be used to support the hypothesis of a red algal ancestry for the ascomycetes (see Moore 1989a). Heath et al. (1987) extended the previous study showing that the isolate of T maculans Butler had the basidiomycete pattern whereas three species of Protomyces (P. inouyci P. Hennings, P. lactucae-debilis Sawada, and P. pachydermus Thuem.) collectively had a mitotic apparatus that was clearly similar to the typical ascomycete type. Pigmentation: Tubaki (1957) made ethanol extracts of isolates of Taphrina and Protomyces and examined them spectrophotometrically; his results showed that "... members of the two genera resemble each other closely as to pigmentation. Though colonies of these fungi are pinkish in color, none of them produced the carotenoid pigments which are characteristic of Rhodotorula.'' Valadon (1964) using improved techniques found, however, that isolates of Protomyces did contain carotenoids whereas those of Taphrina did not, and he

590

Vc. Descriptions of anamorphic ascomycetous genera and species

suggested that pigment characteristics of certain fungi may be an aid in elucidating their taxonomic affinities. Van Eijk and Roeymans (1982) screened isolates of Taphrina and Protomyces for the presence of carotenoid pigments and the sterols ergosterol and brassicasterol. They concluded that the two genera cannot be separated on the basis of the presence or absence of carotenoids. All the Taphrina isolates were found to produce carotenoids though in a lower concentration than those of Protomyces. Polyols: Rast's group has extensively investigated these acyclic sugar alcohols. On the basis of their studies, which included species of Taphrina, they recommended that the Endomycetales be assigned a rank adequate to its distinction (Rast and Pfyffer 1989). They also reported (Pfyffer et al. 1990) that Taphrina, in accumulating mannitol, behaves perfectly as a euascomycete (all of which are the P2-type) and stated: "The P2-type of Taphrina thus supports the hypotheses that the Taphrinales are among the oldest true Ascomycetes, . . . and, in possessing the largest combination of common characteristics, befit also a likely ancestor of the Basidiomycetes . . . ". 5S rRNA nucleotide sequences: Walker and Doolittle (1982) showed that sequences in the smut fimgi have uridine in the 107 position but that this position is vacant in other Basidiomycota. Walker and Doolittle (1983) subsequently identified five clusters. Clusters 1 and 2 had a type A molecule with a "U" in the 107 position while clusters 3-5 had the type B molecule with an empty 107 position. Gottschalk and Blanz (1985) produced a dendrogram showing the relationships between the basidiomycetous fimgi based on the 5S rRNA sequences. They stated that the 5S rRNA from T deformans corresponded best with those sequences found in the basidiomycetes and placed it on its own next to Cluster 1 which contains a number of smut-like species (see Moore 1988a); but it was also starred to indicate that it corresponded "with the type A/type B bifurcation only in part." In an addendum at the end of the paper they cited a recent paper by Walker (1985a) which contained an analysis of Protomyces inundatus that showed it had 5S rRNA very close to that of T deformans. In a subsequent paper (Blanz and Gottschalk 1986) the diagram appeared without T. deformans, but it is reinstated by Blanz and Unseld (1987). They also reported a dichotomy that has been found in 28S rRNA: an insertion of 27 nucleotides that occurs between positions 603 and 604 in Exobasidium vaccinii (Fuckel) Woronin, Rhodosporidium toruloides, Septobasidium carestianum Bresadola, and Ustilago hordei (Persoon:Persoon) de Lagerheim, but that is absent from Saccharomyces carlsbergensis, Schizosaccharomyces pombe, T deformans, and T vestergrenii Gies. Sterols: Van Eijk and Roeymans (1982) screened isolates of Taphrina and Protomyces for the presence of ergosterol and brassicasterol. They found that 30 strains (24 spp.) of Taphrina produced brassicasterol as the principal sterol.

whereas in four isolates (4 spp.), no brassicasterol could be detected {T. californica, T cerasi, T. farlowii and T maculans). In these latter isolates ergosterol was found to be the major component, while it was missing or only slightly present in the remaining Taphrina species. These authors concluded that there was no reason to doubt the identification of the four Taphrina isolates which did not form brassicasterol (but see the subsections on budding and on mitosis morphology). The effects of sterol inhibitors on T. deformans have been reported by Weete et al. (1985) and Sancholle et al. (1988). Ubiquinones: The ubiquinone Q-10 system, otherwise generally restricted to basidiomycete yeasts, has been reported from isolates o^ Protomyces inouyei, P. lactucaedebilis, P. pachydermus, T caerulescens, T. californica, T carnea, T. deformans, T. maculans, T populina, T. tormentillae Rostrop, and T. wiesneri (Rathay) Mix (Yamada et al. 1983, 1987b, Sugiyama et al. 1985, Moore and Flinn 1991). Urease: Moore and Flinn (1991) reported positive results for T californica, T. maculans, T tormentillae, Symbiotaphrina buchneri, and S. kochii (weak) and negative results for Lalaria carnea, L. deformans, and L. populina. 67.3. Saitoella, Neolecta and Symbiotaphrina The genus Saitoella (Goto et al. 1987a, Sugiyama et al. 1993) is represented by the single species S. complicata, an anamorph species that was described to accommodate two isolates of Himalayan soil yeasts that had been identified as Rhodotorula glutinis. Its basidiomycetous characters include enteroblastic budding (confirmed by electron micrographs), Co-Q 10, colonies that are yellow orange because of carotinoid pigments, and a positive urease reaction. The authors classified it in the Cryptococcaceae but considered it to be ascomycetous because they found it to be DBB negative and to lack xylose in the cell walls. They also said that they believed the genus had a probable close relationship with the Taphrinales because of the colony pigmentation and the cell wall biochemistry. Nishida and Sugiyama (1994), using 18S rRNA, found Saitoella to group with Protomyces, Schizosaccharomyces and Taphrina. Saitoella differs from Lalaria in not forming starch-like compounds, being urease positive, and in having enteroblastic budding. The genus Symbiotaphrina Kiihlwein & Jurzitza ex Gams & von Arx (1980) has been attributed to the Taphrinales because it only "... differs from Taphrina [anamorphs] by its symbiotic mode of life." There are two species, both of which occur in intestinal mycetomata of Anobiid beetles (Jurzitza 1979): the type, S. buchneri Grabner ex Gams & von Arx from Stegobium paniceum (L.) Jacobson (= Sitodrepa panicea (L.) Leconte) and S. kochii Jurzitza ex Gams & von Arx from Lasioderma serricorne F. The extensive studies of endosymbiosis (Buchner 1965) show the insect hosts to be

67. Lalaria R.T. Moore /R.T. Moore

dependent on the yeasts for essential growth factors and to have evolved very sophisticated behavior patterns to assure the generational transfer of the yeasts. Both species of Symbiotaphrina are exceptional in their inability to assimilate urea (Kiihlwein and Jurzitza 1961, Jurzitza 1964, Bismanis 1976) and they further differ generically from the species of Lalaria in being able to assimilate erythritol and L-rhamnose (but see Bismanis 1976), and in lacking any known teleomorph. Noda and Kodama (1996), using small-subunit rRNA, found the two species to be distinct from each other and to form a distinct line close

591

to the discomycetes. There are also yeastlike symbiotes in the fat bodies of three genera of rice planthoppers; Noda et al. (1995), using 18S rRNA, found these fungi to be monophyletic and related to the pyrenomycetes. The teleomorph genus Neolecta (Landvik 1996), on the basis of rDNA analyses, is believed to be close to the basal ascomycetes; it clusters with the Schizosaccharomycetales, Taphrinales (Taphrinaceae and Protomycetaceae), and Pneumocystidales and with these is thought to constitute a sister group to the Saccharomycetales and to all other ascomatous ascomycetes.

592

Vc. Descriptions of anamorphic ascomycetous genera and species

68. Myxozyma van der Walt, Weijman & von Arx C.P. Kurtzman Diagnosis of the genus Vegetative reproduction is by multilateral budding on a narrow base. Cells are spheroidal or ellipsoidal. Rudimentary pseudohyphae may be present but true hyphae are not formed. Sugars are not fermented. Nitrate is not assimilated. Cultures are often quite mucoid. Extracellular starch-like compounds are produced. Diazonium blue B reaction is negative. Type species Myxozyma melibiosi (Shifrine & Phaff) van der Walt, Weijman & von Arx Species accepted 1. Myxozyma geophila van der Walt, Y. Yamada & Nakase (1987) 2. Myxozyma kluyveri van der Walt, Spencer-Martins & Y. Yamada (1989) 3. Myxozyma lipomycoides van der Walt, Y. Yamada & Nakase (1987) 4. Myxozyma melibiosi (Shifrine & Phaff) van der Walt, Weijman & von Arx (1981) 5. Myxozyma monticola Pretorius & Spaaij (1993) 6. Myxozyma mucilagina (Phaff, Starmer, Miranda & M.W Miller) van der Walt, Weijman & von Arx (1981) 7. Myxozyma udenii Spaaij, Weber, Oberwinkler & van der Walt (1990) 8. Myxozyma uanderwaltii Spaaij, Weber & M.Th. Smith (1993) Key to species See Table 65. 1. 2(1). 3(2). 4(2). 5(1). 6(5). 7(6).

a b a b a b a b a b a b a b

Melezitose assimilated —> 2 Melezitose not assimilated -^ 5 L-Rhamnose assimilated -^ 3 L-Rhamnose not assimilated -^ 4 Melibiose assimilated Melibiose not assimilated D-Arabinose assimilated D-Arabinose not assimilated Cellobiose assimilated —> 6 Cellobiose not assimilated Trehalose assimilated ^ 7 Trehalose not assimilated Melibiose assimilated Melibiose not assimilated

p. p. p. p.

M. monticola: M. mucilagina: M. uanderwaltii: M. udenii:

595 595 596 596

. M. geophila:

p. 593

M. melibiosi: M. kluyveri: M. lipomycoides:

p. 594 p. 593 p. 594

Table 65 Key characters of species in the genus Myxozyma Assimilation

Species Melezitose

L-Rhamnose

Melibiose

D-Arabinose

Cellobiose

Trehalose

-

-

+

-

-

+

+

+

+

+

+

-

+

+

+

M. melibiosi

-

-

+

+

+

-

M. monticola

+

+

+

+

-

+

M. mucilagina

+

+

V

+

V

M. udenii

+

-

+

+

M. vanderwaltii

+

-

-

+

+

+

Myxozyma geophila M. kluyveri M. lipomycoides

Myxozyma van der Walt, Weijman & von Arx / C.R Kurtzman

CI

Systematic discussion of the species 68.1. Myxozyma geophila van der Walt, Y. Yamada & Nakase (van der Walt et al. 1987c) Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2.2-5.l)x(2.45.6) |im, and single or in pairs. Growth is mucoid, glistening and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, growth under the coverglass is devoid of pseudohyphae and true hyphae. A few outgrowths of undifferentiated cells are occasionally seen. Aerobic growth is mucoid, glistening, with entire margins, and tannishwhite in color. A faint acidic, musky odor is present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +/w V + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation + 5-Keto-D-gluconate + Gelatin liquefaction + Saccharate Growth at 2>TC 10% NaCl/5% glucose Co-Q: 8 (van der Walt et al. 1987c). Mol% G + C: 46.0, 46.8, CBS 7219, CBS 7037, respectively (7;„: van der Walt et al. 1987c).

Origin of the strains studied: CBS 7219 (NRRL Y-17252), CBS 7037 (NRRL Y-17246), soil, Transvaal, South Africa. Type strain: CBS 7219.

593

%

%>

I

0 m

4*

.§

&

Fig. 279. M kluyveri, CBS 7332. Budding cells after 3 days on 5% malt extract agar at 25T. Bar = 5 [xm.

25°C, the cells are spheroidal to ovoidal, (2.0^.1)x(2.15.1) |im, and single or in pairs (Fig. 279). Growth is mucoid, glistening and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither pseudohyphae nor true hyphae are formed under the coverglass. Aerobic growth is mucoid, glistening, with an entire margin, and tannish-white in color. There is a faint acidic, musky odor. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A^-Acetyl-D-glucosamine Methanol Ethanol s Glycerol + Erythritol Ribitol + Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside + Salicin + D-Gluconate + DL-Lactate Succinate + Citrate ' v Inositol V Hexadecane Nitrate Vitamin-free -

Additional assimilation tests and other growth characteristics: + + -

Starch formation Gelatin liquefaction Growth at 2>TC

+/w

Comments: Results from the present study are in agreement with the original description of this species (van der Walt et al. 1987c), except that sucrose assimilation was found to be weak or positive rather than negative.

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: 8 (van der Wak et Mol% G + C: 39.5, CBS

68.2. Myxozyma kluyveri van der Walt, SpencerMartins & Y. Yamada (van der Walt et al. 1989e) Growth on 5% malt extract agar: After 3 days at

Origin of the strains studied: CBS 7332 (NRRL Y-17277), CBS 7405 (NRRL Y-17359), soil, Transvaal, South Africa. Type strain: CBS 7332.

al. 1987c). 7332 {T^: van der Walt et al. 1989e).

594

Vc. Descriptions of anamorphic ascomycetous genera and species

Comments: Results from the present study are in generally good agreement with the original description of this species (van der Walt et al. 1989e). 68.3. Myxozyma lipomycoides van der Walt, Y. Yamada & Nakase (1987c) Growth on 5% malt extract agar: After 3 days at 25T, the cells are spheroidal to ovoidal, (2.1-6.0) x (2.56.0) (im, and single or in pairs. Growth is mucoid, glistening and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither pseudohyphae nor true hyphae are formed under the coverglass. Aerobic growth is mucoid, glistening, and with entire to scalloped margins. The growth is tannish-white in color. A faintly acid, "metallic" odor is present. Fermentation: absent. Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s s s s -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose Co-Q: 9, CBS 7038 (van Mol% G + C: 40.9, CBS

+ -

Starch formation Gelatin liquefaction Growth at 37°C

w -

der Walt et al. 1987c). 7038 {T^: van der Walt et al. 1987c).

Origin of the strain studied: CBS 7038 (NRRL Y-17253), from a tree-inhabiting lichen, Transvaal, South Africa. Type strain: CBS 7038. Comments: Several differences in assimilation of carbon compounds were found between the present study and the original description (van der Wah et al. 1987c). In the present study, D-mannitol was not assimilated, whereas growth occurred with D-ribose, cellobiose and citrate.

68.4. Myxozyma melibiosi (Shifrine & Phaff) van der Walt, Weijman & von Arx (1981) Synonyms: Torulopsis melibiosum Shifrine & Phaff (1956) Paratorulopsis melibiosi (Shifrine & Phaff) Novak & Zsolt (1961) Cryptococcus melibiosum (Shifrine & Phaff) Phaff & Fell (1970) Candida melibiosophila Golubev (1981)

Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (2.26.9) X (2.7-6.9) |im, and single, in pairs, or occasionally in small clusters (Fig. 280). Growth is mucoid, glistening and tannish-white in color.

^

C3*

O

6

o

^3

r)

0

0 —^

Fig. 280. M melibiosi, CBS 2102. Budding cells, after 3 days on 5% malt extract agar at 25''C. Bar = 5 fxm.

Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, neither pseudohyphae nor true hyphae are formed under the coverglass. Aerobic growth is mucoid, glistening, with entire to scalloped margins, and a tannishwhite color. A faintly acidic odor with a trace of esters is present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V + V + + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/s s +/w

Myxozyma van der Walt, Weijman & von Arx / C.P. Kurtzman

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation w 5-Keto-D-gluconate s Gelatin liquefaction Saccharate Growth at BVC 10% NaCl/5% glucose Co-Q: 8, CBS 2102 (Yamada 1986a). Mol% G + C: 50.3, CBS 2102 {T^: van der Wah et al. 1987c).

595

Type strain: CBS 7806. Comments: Results from the present study are in generally good agreement with the original description (Pretorius et al. 1993). Exceptions are growth on cellobiose, negative in the present study, and 5-keto-Dgluconate, positive in the present study.

Origin of the strains studied: CBS 2102 (NRRL 68.6. Myxozyma mucilagina (Phaff, Starmer, Miranda & M.W. Miller) van der Walt, Y-11781), CBS 2667 (NRRL Y-17360), both from the Weijman & von Arx (1981) beetle Dendroctonus monticolae in ponderosa pine (Pinus Synonym: ponderosa), California, U.S.A. Candida mucilagina Phaflf, Starmer, Miranda & M.W. Miller (1980) Type strain: CBS 2102. Growth on 5% malt extract agar: After 3 days at 25°C, the cells are spheroidal to ellipsoidal, (1.968.5. Myxozyma monticola Pretorius & Spaaij 6.8)x(2.1-6.8)|im, and single, in pairs, or occasionally (Pretorius et al. 1993) in clusters (Fig. 281). Growth is mucoid, glistening and Growth on 5% malt extract agar: After 3 days at tannish-white in color. 25°C, the cells are spheroidal to ovoidal, (2.0-5.0)x(2.55.0) [im, and single or in pairs. Growth is mucoid, Growth on the surface of assimilation media: Pellicles are not formed. glistening and light tan in color. Dalmau plate culture on morphology agar: After Growth on the surface of assimilation media: 7 days at 25°C, neither hyphae nor pseudohyphae are Pellicles are not formed. formed under the coverglass. Aerobic growth is mucoid, Dalmau plate culture on morphology agar: After glistening, with entire colony margins, and tannish-white 7 days at 25°C, neither pseudohyphae nor true hyphae are in color. A faintly acidic odor is present. formed under the coverglass. Aerobic growth is glistening, mucoid, with entire colony margins, and tannish-white in Fermentation: absent. Assimilation: color. A faintly acidic odor is present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

v + + + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Er3^hritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + s + + s v s + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 5-Keto-D-gluconate + Saccharate 10% NaCl/5% glucose Co-Q: 8 (Pretorius et al. 1993). Mol% G + C: 45.2 (T;^: Pretorius et

Starch formation Gelatin liquefaction Growth at 37T

+ -

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + v + + + v v + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + s + + + + w/+/w +/w -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation + 5-Keto-D-gluconate + Gelatin liquefaction Saccharate Growth at 37T + 10% NaCl/5% glucose Co-Q: 8 (Phaflf etal. 1980). Mol% G + C: 43.2-44.0, CBS 7071 and 4 additional strains (BD: Phaflf et al. 1980).

Origin of the strains studied: CBS 7071 (NRRL Y-11823, UCD-FST 76-236C), CBS 7070 (NRRL Y-17361, Origin of the strains studied: CBS 7790 (NRRL UCD-FST 76-234C), both from rotting agria cactus Y-17725), from flux of an oak {Quercus sp.), South Africa; {Stenocereus gummosis), Baja California Sur, Mexico. Type strain: CBS 7071. CBS 7806 (NRRL Y-17726), soil, South Africa. al. 1993).

Vc. Descriptions ofanamorphic ascomycetous genera and species

596

Origin of the strain studied: CBS 7439 (NRRL Y-173 87), from soil around the roots of a mango tree (Mangifera indica), Miami, Florida, U.S.A. Type strain: CBS 7439. Comments: Results from the present study are in agreement with those of the original description (Spaaij et al. 1990).

Q €>

m ($

o

#

^9\

m

Fig. 281. M. mucilagina, CBS 7071. Budding cells after 3 days on 5% malt extract agar at 25°C. Bar = 5 |im.

68.7. Myxozyma udenii Spaaij, Weber, Oberwinkler & van der Walt (1990) Growth on 5% malt extract agar: After 3 days at 25T, the cells are spheroidal to ovoidal, (3.0-5.6)x(3.06.2) |im, and single or in pairs. Growth is mucoid, glistening and tannish-white in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither hyphae nor pseudohyphae are present under the coverglass. Aerobic growth is mucoid, glistening, with smooth colony margins, and tannish-white in color. A faintly acidic odor is present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + s +

-

+

-

+ +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s + + s w/s + w/s +

Additional assimilation tests and other [growth characteristics:

+ 2-Keto-D-gluconate 5-Keto-D-gluconate + Saccharate 10% NaCl/5% glucose Co-Q: 8 (Spaaij et al. 1990). Mol% G + C: 49.2, CBS 7439 {T^ :

Starch formation Gelatin liquefaction Growth at 37T

Spaaij et al. 1990).

68.8. Myxozyma vanderwaltii Spaaij, Weber & M.Th. Smith (1993b) Growth on 5% malt extract agar: After 3 days at 25''C, the cells are spheroidal to ovoidal, (3.5-6.5)x(4.06.5) |im, and single or in pairs. Growth is mucoid, glistening and light tan in color. Growth on the surface of assimilation media: Pellicles are not formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, neither hyphae nor pseudohyphae are evident under the coverglass. Aerobic growth is mucoid, glistening, with colony margins entire, and tannish-white in color. A faintly acidic, buttery odor is present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + s v + + + + v -

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate' Vitamin-free

+ + + + + + s s v -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate + Gelatin liquefaction Saccharate Growth at 37°C 10% NaCl/5% glucose Co-Q: 8 (Spaaij et al. 1993b). Mol% G + C: 44.8 {T^\ Spaaij et al. 1993b).

+ -

Origin of the strains studied: CBS 7793 (NRRL Y-17727), from a flower of Protea repens (L.)L, South Africa; CBS 7794 (NRRL Y-17728), from the flux of an oak (Quercus sp.). South Africa. Representative strain: CBS 7793, a living ex-type strain is not available. Comments: Results from the present study are in generally good agreement with the original description

8. Myxozyma van der Walt, Weijman & von Arx / C.P. Kurtzman

(Spaaij et al. 1993b). Growth reactions on 2-keto-Dgluconate and 5-keto-D-gluconate were exceptions and found to be positive in the present study. Comments on the genus The genus Myxozyma was described by van der Walt et al. (1981) for anamorphic ascomycetous yeasts with physiological and cultural properties similar to Lipomyces, i.e., formation of extracellular starch-like compounds and growth on imidazol and imidazol-4-carboxylic acid as sole sources of nitrogen. The proposed close relatedness of Myxozyma and Lipomyces was confirmed by Kurtzman and Liu (1990) from analysis of partial sequences of small and large subunit rRNAs. However, with the exception of M kluyveri, which clustered with Lipomyces species, the two genera appear as closely related but distinct groups. The rRNA comparisons indicated that the five species (M geophila, M. kluyveri, M. lipomycoides, M. melibiosi and M. mucilagina) included in the study were genetically isolated from one another as proposed by Yamazaki and Goto (1985) and Yamada and Aizawa (1987) from analysis

597

of isoenzyme mobilities. In addition to the preceding, various physiological and electrokaryotypic studies of the Lipomycetaceae have been reported by Botha and Kock (1993), Cottrell and Kock (1989, 1990), Kock et al. (1992), van der Walt (1992) and van der Walt et al. (1990a). Validly described species not examined because of unavailability of living cultures: The following three species of Myxozyma were validly described by virtue of deposit of dried, dead holotypes in herbaria, but the authors, in contradiction to the intent of the Botanical Code (Greuter et al. 1994), did not distribute the living cultures characterized in their publications, thus preventing verification of physiological and genetic properties: - Myxozyma neotropica Spaaij & Weber (Spaaij et al. 1992b); - Myxozyma nipponensis Spaaij & Weber (Spaaij et al. 1993a); - Myxozyma sirexii Spaaij & Weber (Spaaij et al. 1992a).

598

Vc. Descriptions of anamorphic ascomycetous genera and species

69. Oosporidium

Stautz

M.Th. Smith Diagnosis of the genus Vegetative reproduction is by multilateral budding on a broad base combined with septation. Cells vary in shape and usually remain attached to each other, forming long chains. True septa are sometimes present and independent from the broad base budding. Arthrospores are absent. Asexual endospores are formed by protoplasmic cleavage. Sexual reproduction absent. Fermentation is absent. Nitrate is assimilated. Pink or orange-yellow pigments of a non-carotenoid nature are produced. Diazonium blue B reaction is negative. Type species Oosporidium margaritiferum Stautz Species accepted 1. Oosporidium margaritiferum Stautz (1931) Systematic discussion of the species 69.1. Oosporidium margaritiferum Stautz (1931) Synonym: Trichosporon margaritiferum (Stautz) Buchwald (1939)

Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is light pink to light orange, dull, rugose, raised, and with a fragile surface.

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, there is no visible growth. After one week, a granular or flocculent sediment is formed. Cells are globose and ovoidal or elongate, (5.0-12.0)x(6.012.5) [im. Vegetative reproduction is multilateral, usually by budding on a broad base combined with septation. Cells usually remain attached to each other and form long branched chains (Fig. 282). After one month a sediment is present.

Dalmau plate culture on corn meal agar: Pseudomycelium is present. It consists of branched chains of ovoid, globose or elongate cells. At the periphery of the colony, cells tend to become progressively more elongated (Fig. 283). True septa are sometimes formed.

Fig. 282. O. margaritiferum, CBS 2531. Budding cells in glucose-yeast extract-peptone water after 1 week at 25°C. Bar= 10|im.

Fig. 283. O. margaritiferum, CBS 2531. Filaments in Dalmau plate culture on corn meal agar after 10 days at 2 5 ^ . Bar= 10|im.

Formation of asexual spores: Asexual endospores are formed by protoplasmic cleavage (Fig. 284). Cells are of variable size and shape and contain one to ten endospores

69. Oosporidium Stautz / M. Th. Smith

of various sizes that are globose or ellipsoidal in shape. Germination of endospores often starts inside the parent cell. Endospores were observed on YM and Gorodkowa agar slants and slide cultures after 4-6 weeks at 18-20''C and in slide cultures on corn meal and potato-dextrose agars. The slants had been inoculated with cultures grown in 15% liquid malt extract for 5-6 days at 25''C on a shaker (do Carmo-Sousa 1970b). Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V

+ + +

-

+

-

+ +

-

+

V

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

599

Stautz; CBS 6177, slime flux of elm tree, California, U.S.A., do Carmo-Sousa. Type strain: CBS 2531, isolated by Stautz.

n n +

V V

-

n + +

-

n +

-

Additional assimilation tests and other growth characteristics: 50% Glucose Maximum growth temperature 32-34''C. Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strains studied: CBS 2531, slime flux.

Fig. 284. O. margaritiferum, CBS 2531. Endospores on YM agar after 5 weeks at 25°C. Bar= 10 |im.

Comments: Strains of this species do not grow in the liquid media used for growth tests. Assimilation of carbon compounds was tested on agar slants of Yeast Nitrogen Base. Assimilation of nitrate was tested on agar slants of Yeast Carbon Base. Even on these solid media, growth was very slow. The occurrence of broad-based budding and formation of pink to orange pigments are unusual characters for ascomycetous yeasts. A phylogenetic analysis of rDNA sequences placed O. margaritiferum among the euascomycetes (Kurtzman and Robnett 1995).

600

Vc. Descriptions ofanamorphic ascomycetous genera and species

70. Saitoella S. Goto, Sugiyama, Hamamoto & Komagata D.G. Ahearn, J. Sugiyama and R.B. Simmons Diagnosis of the genus Asexual reproduction is mainly by multipolar enteroblastic budding. Vegetative cells are ovoidal to ellipsoidal and occur singly or in pairs. True mycelium and pseudomycelium are normally absent. Ascospores, teliospores, and ballistospores are not formed. Sugars are not fermented. Nitrate is assimilated. Starch-like compounds are not synthesized. Carotenoid pigments are formed. Xylose is absent in the cell walls. Diazonium blue B reaction is negative. The major ubiquinone system is Q-10. Type species Saitoella complicata S. Goto, Sugiyama, Hamamoto & Komagata Species accepted 1. Saitoella complicata S. Goto, Sugiyama, Hamamoto & Komagata (1987) Systematic discussion of the species 70.1. Saitoella complicata S. Goto, Sugiyama, Hamamoto & Komagata (1987a) Growth in morphology broth: After 3 days at 20''C, the cells are mainly ovoidal to ellipsoidal, (2.5-8.0)x(3.014.0) jim; elongate pseudohyphal-type cells are occasionally present (Fig. 285A). Budding is mainly enteroblastic; the primary bud is holoblastic and the secondary, and probably successive buds, are enteroblastic. The cell wall is of the ascomycetous type (Fig. 285B,C). There is an orange-red ring and sediment. Pellicles are not formed. Growth on morphology agar: After one month at 20''C, the streak culture is yellowish-orange to orangishred, the surface is smooth and shiny, and the margin is entire. Dalmau plate culture on potato dextrose and morphology agars: After 7 days at 25''C, growth under the coverslip is hyaline and consists mostly of single budding cells. Well-developed pseudohyphae or true hyphae are not formed. In aged cultures (>3 weeks)

in dilute (1:3) potato dextrose agar, elongated cells and short hyphal elements are sparsely produced. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w +/w + + + +

-

+ + + +

-

+

-

+ w/-

-

n

/>/-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+ + n + n +/w + +

-

n +

-

Fig. 285. A. Photomicrograph of vegetative cells of S. complicata; B. section of two-layered cell wall with slight capsule; C. whole cell showing nucleus and mitochondria.

70. Saitoella S. Goto, Sugiyama, Hamamoto & Komagata /D.G. Ahearn, J. Sugiyama and R.B. Simmons

Additional assimilation tests and other characteristics:

growth

50% Glucose Urease + Starch formation Max. growth temp. 34''C Co-Q: 10. Mol% G + C: 51.5, lAM 12963 (holotype) (HPLC: Hamamoto et al. 1986b), 52.9 (Sugiyama et al. 1985); 50.9 lAM 12964 (CBS 7427, JCM 7359), HPLC: Hamamoto et al. 1986b).

Origin of strains studied: Soil from Laya, Bhutan; soil, Nepal (Goto and Sugiyama 1970). Type strain: lAM 12963 (CBS 7301, JCM 7358) designated by Goto et al. (1987a). Comments: Saitoella complicata was originally identified as a strain of Rhodotorula glutinis because both of these species have carotenoid pigmentation, lack

601

fermentation, possess similar assimilatory spectra, and ascospores, ballistospores and teliospores were not observed. Subsequently, the two species were shown to differ in their cellular carbohydrate composition, ubiquinone systems, diazonium blue B color reactions (Sugiyama et al. 1985), DNA base composition (Hamamoto et al. 1987) and in their cell wall types (Goto et al. 1987a). Goto et al. (1987a) indicated similarities between Saitoella and the ascomycetous genera Protomyces and Taphrina. Analysis of DNA sequences from 18S rRNA coding regions for T. wiesneri and S. complicata indicated these species form an evolutionary lineage separate from the hemiascomycetes and euascomycetes (Nishida and Sugiyama 1993).

Vc. Descriptions of anamorphic ascomycetous genera and species

602

71. Schizoblastosporion

Ciferri

M.Th. Smith Diagnosis of the genus Asexual reproduction is by bipolar budding in basipetal succession on a broad base. Sexual reproduction is absent. Fermentation is absent. Acetic acid is not produced. Nitrate is not assimilated. Diazonium blue B reaction is negative. Type species Schizoblastosporion starkeyi-henricii Ciferri Species accepted 1. Schizoblastosporion starkeyi-henricii Ciferri (1930) Systematic discussion of the species 71.1. Schizoblastosporion starkeyi-henricii Ciferri (1930a) Growth on malt extract: After 3 days at 25''C, the cells are ellipsoidal, long-ellipsoidal or cylindroidal, (2.56.8) X (4.5-20) |im, single or in pairs. Buds are formed on a broad base at the poles (Fig. 286). A thin sediment is formed. After one month at 17°C, a sediment, a ring and, occasionally, some islets are present, but a pellicle is not formed.

Fig. 286. S. starkeyi-henricii, CBS 2159. Bipolarly budding cells in malt

Growth on malt agar: After one month at 17°C, the extract after 3 days at 25T. Bar= 10 (im. streak is grayish-brown, soft, dull, and flat. Origin of the strains studied: CBS 2159, soil from Dalmau plate cultures on potato- and corn meal peat bog, Lund; CBS 2914, forest soil. New Zealand, agars: Pseudomycelium is absent or consists of small di Menna; CBS 4684, soil, Norway, Roberts; CBS 6297, chains of cells that sometimes have side branches. soil, Germany, Windisch, and 3 additional strains isolated Fermentation: absent. from soil. New Zealand, di Menna (1965b). Assimilation: Type strain: CBS 2159, isolated by Lund. Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V V

V

V

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

. V

V

+

-

V

-

+

-

n

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate V Growth at SOT V 50% Glucose Growth at 35T 0.01% Cycloheximide Co-Q: Not determined. Mor/o G + C: 41.1^2.2, VKM Y-1947, VKM Y-1948 (Golubev and Vagabova 1977).

Comments on the genus The genus Schizoblastosporion exhibits bipolar budding in common with the genus Kloeckera and some species of the genus Brettanomyces, as well as with the teleomorphic genera Hanseniaspora, Nadsonia, Saccharomycodes and Wickerhamia. Schizoblastosporion can be distinguished from the latter genera by the absence of ascospores. It differs from Kloeckera by lack of fermentation and from Brettanomyces by absence of acetic acid production. Schizoblastosporion chiloense Ramirez & Gonzalez (1984J) is excluded from the present treatment because it shows multipolar budding and produces septate hyphae in addition to pseudomycelium. This species resembles Dipodascus ingens or D. ovetensis. Comparisons of LSU rDNA place S. starkeyi-henricii within the genus Nadsonia and S. chiloense near Dipodascus ingens (C.R Kurtzman and C.J. Robnett, manuscript in preparation).

72. Sympodiomyces Fell & Statzell / A. Statzell-Tallman and J. W Fell

603

72. Sympodiomyces Fell & Statzell A. Statzell-Tallman and J.W. Fell Diagnosis of the genus The streak culture on malt agar is dull cream, the surface is smooth, the texture soft but not mucoid. YeastUke cells are present. A conidiophore develops directly from a yeast cell, producing a terminal conidium. Subsequent conidia are produced sympodially, i.e., at the side of the conidium a new growing tip of the conidiophore develops, forming a new terminal conidium resulting in an elongate conidiophore with successively formed conidia. As a result of conidial detachment the conidiophores possess several scars. Conidial formation is irregular, both in distance between conidia and location on the conidiophore. Branched true mycelium is inconspicuous and restricted in development. Conidia on the mycelium are single on a short peg or sympodial on an elongate conidiophore. Diazonium blue B, urease and fermentation tests are negative. Coenzyme Q-9 is present. Type species Sympodiomyces parous Fell & Statzell Species accepted 1. Sympodiomyces parvus Fell & Statzell (1971) Systematic discussion of the species 72.1. Sympodiomyces parvus Fell & Statzell (1971) Growth in 5% malt extract: After 5 days at 12T, the single cells are polymorphic (Fig. 287); they are round, ovoid and subglobose, (1.0-1.3)x(1.3-3.4)(im. The cells are single, in pairs and short branched chains. The cells in chains are generally larger, (2.6-3.4)x(4.7-5.4) jim and ovoid in shape. The conidiophores at this age are short (which gives the appearance of typical budding yeast cells) or they are elongate to 4jim. There is a moderate sediment. After one month, the conidiophores

e>

^

Fig. 287. S. parous, CBS 6147. Yeast phase with the sympodial formation of conidia from culture grown for one to four weeks in malt extract at 12*^0. Bar=10|im. Camera lucida drawings.

have elongated to 11 |im with numerous bud scars and one or more conidia. Growth on 5% malt agar: After one month at 12°C, the streak culture is dull cream, the surface is smooth, the texture is soft but not mucoid. The growth is convex and the periphery is entire, apart from tufts of non-aerial mycelium at the edges (Fig. 288). Dalmau plate culture on corn meal agar: After one month at 12''C, there is true mycelium with distinct septa and clusters of conidia. The latter form in the same manner as single cells, i.e., the new bud forms terminally on a conidiophore that elongates sympodially to produce new conidia. The hyphae are approximately 2 |im in width; there are often spheroidal intercalary cells in the range of 5 X 7 |im. The mycelium formed is inconspicuous, and somewhat more extensive on malt agar than on corn meal agar.

Fig. 288. S. parvus, CBS 6147. Hyphal formation after one week on malt agar at 12''C. Bar= 10|im. Camera lucida drawings.

Vc. Descriptions of anamorphic ascomycetous genera and species

604

Type strain: CBS 6147.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

s ws + s

-

+ s V

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + +

s s

s

s s Additional assimilation tests and other growth characteristics: n 2-Keto-D-gluconate Urease n Gelatin liquefaction 5 -Keto-D-gluconate Saccharate Biotin-free D-Glucuronate s Thiamine-free 50% (w/w) glucoseGrowth at 25°C + yeast extract agar Growth at 30°C 10% NaCl/5% glucose Starch formation V

Co-Q: 9 (Sugiyama et al . 1991). Mol% G + C: 46.3 {T^: Sugiyama et al. 1991). Cellular carbohydrate composition (mol%): glucose, 45.9 ; mannose, 40.6; galactose, 7.2; fucose, 4.2; ribose, 1.5; arabinose, 1.2 (Sugiyama et al. 1991).

Origin of the strains studied: 52 isolates from the open waters of the southern Indian and Pacific Oceans (Fell and Statzell 1971, Fell 1976).

Comments on the genus Sympodiomyces is an ascomycetous yeast; the diazonium blue B and urease test results are negative. Additionally, van der Walt and Hopsu-Havu (1976) and Kreger-van Rij (personal communication) report that the cell wall is typically ascomycetous. Sugiyama et al. (1991) state that the low mol% G + C content is typical of ascomycetous yeasts. The genus may be endemic to marine waters; the only reported occurrences (Fell and Statzell 1971, Fell 1976) have been from waters of Antarctic origin in the southern Pacific and Indian Oceans in the Antarctic Intermediate, Sub Antarctic, and South Pacific Central water masses from approximately lOO^W westward to 118"E and 62°S northward to 42°S. Isolations were from depths of 16 to 748 meters where water temperatures ranged from 3.07-10.55''C and salinities were 33.9434.85%o. Cell concentrations ranged from 1-5 per liter of sea water. Information on the genus is limited. In addition to the original reports (Fell and Statzell 1971, Fell 1976), the genus has been studied by van der Walt and Hopsu-Havu (1976) who reported on the diazonium blue B reaction and cell wall structure and by Sugiyama et al. (1991) who compared the genus with Sympodiomycopsis. Kurtzman and Robnett (1995) demonstrated from comparisons of nucleotide sequences from the 5' end of large subunit rDNAs that Sympodiomyces, Blastobotrys, Arxula and Stephanoascus are closely related and may be congeneric (Fig. 170, p. 385).

605

73. Trigonopsis Schachner / D. Yarrow

73. Trigonopsis Schachner D. Yarrow Diagnosis of the genus Cells are triangular or ellipsoidal; tetrahedral and rhomboidal cells are sometimes present. Reproduction is by budding from the projecting angles on triangular and tetrahedral cells, and multilaterally on ellipsoidal cells. Neither hyphae nor pseudohyphae are formed. Fermentation is absent. Nitrate is not assimilated. The cell wall is ascomycetous, comprising two layers. Diazonium blue B reaction is negative. Urea is not hydrolyzed. Type species Trigonopsis variabilis Schachner Species accepted 1. Trigonopsis variabilis Schachner (1929) Systematic discussion of the species 73.1. Trigonopsis variabilis Schachner (1929) Growth on morphology agar: After 3 days at 25°C, the cells are ellipsoidal; triangular cells are usually also present, (3.5-6.0)x(2.0-6.0) ^m, and they are single or in pairs (Fig. 289). Growth on the surface of malt extract: After 1 month at 20°C, a ring and sometimes a pellicle, are present. Slide culture on morphology agar: After 14 days at room temperature (20-22''C), there are neither hyphae nor pseudohyphae. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

-

V

s

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

s s

-

s + +

-

n

Additional assimilation tests and other g;roi characteristics: 2-Keto-D-gluconate Biotin-free + D-Glucuronate Pyridoxine-free V L-Lysine 0.01% Cycloheximide D-Glucosamine (N)^ Growth at 3TC Utilization of D-glucosamine as a source of nitrogen.

+ +

Co-Q: Not determined. Mol% G + C: 46.1, IFO 0755 (CBS 1040) (T^: Nakase and Komagata 1971g).

Origin of strains studied: CBS 1040, beer in Germany; CBS 1041, variant of CBS 1040 which produces few triangular cells; CBS 4095, grapes in Italy. Type strain: CBS 1040, "Rasse I" isolated from beer in Germany by Schachner (1929).

X /i.^

^

c?

Fig. 289. T. variabilis, CBS 1041. After 3 days at 25^C in malt extract (Slooff 1970d).

Comments: The proportion of triangular cells to ellipsoidal cells formed by strains of this species is influenced by nitrogen source (Sentheshanmuganathan and Nickerson 1962, Picci and Verona 1962, Sasek and Becker 1969), carbon source (Matthewson and Barnett 1974), incubation temperature (Rambelli 1959, Picci and Verona 1962, Packer and Bersten 1977), presence of the detergents Tween 80 and Span 80, and of shortchain alcohols (Packer and Bersten 1977). It is also dependent on the strain, as is demonstrated by the variant CBS 1041.

This Page Intentionally Left Blank

Part Via

Classification of tlie basidiomycetous taxa

This Page Intentionally Left Blank

Chapter 74

Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous yeasts T. Boekhout, R.J. Bandoni, J.W. Fell and K.J. Kwon-Chung Contents 1. 2. 3. 4.

Introduction Taxonomy of heterobasidiomycetous yeasts Molecular phylogeny Characterization of orders and families

609 609 612 613

1. Introduction Many heterobasidiomycetes have a unicellular budding haploid state alternating with a dikaryotic hyphal state, i.e., they are dimorphic and possess a yeast state. In some species, diploid, aneuploid or dikaryotic yeast states occur, and many anamorphic taxa are known only as yeasts. For teleomorphic yeasts, the hyphal state may be limited in culture, e.g., in some species of Cystofilobasidium Oberwinkler & Bandoni, but it can be indefinite and perhaps unlimited in many others, e.g., most species of Rhodosporidium Banno, Tremella Persoon and Sirobasidium de Lagerheim & Patouillard. With few exceptions, our knowledge of development in nature, ecology, and general biology of these fungi is fragmentary or nonexistent. Species parasitizing economically important annual plants (e.g., Ustilaginales) have hyphal phases of known duration and extent, but even in these species, little is known of the frequency of occurrence or distribution of the free-living yeast states. For some taxa, e.g., the sporobolomycetaceous taxa, the abundant and widespread occurrence of the yeast states is known, but occurrence of dikaryotic mycelia in nature is essentially unknown. The terms "yeast" or "yeast state" are applied to the budding unicellular phase or phases in heterobasidiomycetous life histories. These yeast states are readily obtained from basidiospores in species with macroscopically visible basidiomata, e.g., many species of Tremella, Sirobasidium, Holtermannia Saccardo & Traverso, Cystobasidium (de Lagerheim) Neuhoff, Mycogloea Olive, and from those causing visible disease symptoms in plants, e.g., species of Ustilago (Persoon) Roussel, Itersonilia Derx, and others. The yeast states provide one approach to studies of relationships of budding fungi, including determining relationships of anamorphic yeasts of uncertain affinity. Yeasts or yeast states are presently known from Agaricostilbales, Atractiellales, Cryptobasidiales, Exobasidiales, Filobasidiales, Graphiolales, Platygloeales,

Septobasidiales, Sporidiales, Tremellales, and Ustilaginales (Oberwinkler 1987, and see below). However, yeast states of many of these groups of organisms are rarely isolated in nature, i.e., other than from the basidiocarps. Fungi that form short hyphal fragments or cellular aggregates are frequently referred to as yeastlike, e.g., species of Trichosporon Behrend. It should be stressed, however, that the distinctions among the various morphs (unicellular, yeastlike and pseudohyphal) are not always clear. Yeast/hyphal dimorphism which occurs in many groups of Heterobasidiomycetes, seems to be an important taxonomic feature. This monograph includes only a small number of those taxa in which obligatory and stable yeast states occur in the normal course of the life history. 2. Taxonomy of heterobasidiomycetous yeasts Brefeld (1881, 1888, 1895a,b) was the first mycologist to make detailed observations of basidiospore germination in heterobasidiomycetous fungi. He described and illustrated budding growth in cultures of many smuts and jelly fungi, and he utilized dimorphism as an important character in his classification. Brefeld's student, A. Moller, followed his example in studies of Brazilian jelly fungi (Moller 1895). Although Brefeld's ideas on dimorphism received little support over the next century, some aspects of his classification system did survive. The taxon "Heterobasidiomycetes" originated with Patouillard (1900), and the term has been applied at some level (i.e., class, subclass) since that time. The Heterobasidiomycetes have encompassed taxa with septate or deeply divided basidia, complex life histories, basidia often arising from distinct probasidia (teliospores or equivalents in rusts, smuts and others), and germination of basidiospores by ballistoconidia or conidia of other types as opposed to Homobasidiomycetes. Modified versions of this classification system have been in use until the present, by a variety of authors, e.g., Martin (1945, 1952), Lowy (1971), Jiilich (1981), and Locquin (1984). Bessey (1950) recognized three subclasses of Basidiomycetes: 1. Teliosporae (fungi with teliospores and transversely septate basidia, and including rusts, smuts, and related fiangi), 2. Heterobasidiae (often with gelatinous basidiomata and septate basidia, teliospores or equivalents lacking in most taxa, and including Tremellales, Auriculariales, Dacrymycetales, and Tulasnellales), 609

610

Via. Classification of the basidiomycetous taxa

Fig. 290. A-C. Basidiospore germination in three species of Tremella. (A) Germinating basidiospores of T. mesenterica, in which the primary buds remain attached to the basidiospores and produce deciduous buds. Bar = 5|xm. (B) T. fuciformis, RJB 7668, China. Bar = 5|im. (C) T. globispora Reid, RJB 7883, Canada. Bar= 10|im. (D)-(F) T. mesenterica yeast cells. (D) Cell with two adjacent budding loci, the length of which suggests numerous buds have been produced, RJB 2259, Canada. Bar = 5fxm. (E) Budding cell mounted in India ink to show thick capsule, RJB 2259. Bar = 5!im. (F) Mixed compatible cells, most of which have developed conjugation tubes, RJB 2259 Bar=10|im. (G) T. mesenterica dikaryotic hypha with two clamps, developed after conjugation of two cells (indicated by arrows), RJB 2285. Bar = 5 ^im. (H) Trimorphomyces papilionaceus, dikaryotic cells of the form produced both as conidia from filamentous conidiogenous cells and by budding of these, or of the indistinguishable H-shaped yeast cells, RJB 6646 Type, Canada. Bar=5 fxm.

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous yeasts / T. Boekhout et al.

611

and 3. Eubasidiae for the Homobasidiomycetes (basidia aseptate and not deeply divided). Talbot (1968) also used three classes, TeHomycetes, Phragmobasidiomycetes, and Holobasidiomycetes, discarding the name Heterobasidioniycetes. Talbot considered the Dacrymycetales and Tulasnellales to be Holobasidiomycetes, and he did not emphasize dimorphism in his classification scheme. Patouillard's classification permitted ready identification of families, since these were largely based upon basidial morphology. Although the Heterobasidiomycetes and Homobasidiomycetes differed in the types of basidiospore germination, yeast states were not emphasized in Patouillard's classification system. Budding of basidiospores was often mentioned in descriptions, but dimorphism was essentially unknown and unstudied in most basidiomycetous groups until the middle of the 20th century. The smuts are an exceptional group among the Heterobasidiomycetes in that their yeast states were used experimentally to examine mating genetics. Since mating initiates the parasitic phase and determines virulence, there were numerous reports on teliospore germination and mating of "sporidia" in the group (see Fischer and Holton 1957, for extensive references). The first attempt to demonstrate mating pheromones in true fungi was carried Fig. 291. Rhodosporidium toruloides Banno (Sporidiales). (A) Mature teliospore. (B) Germinating teliospore with basidia. Bar=10^im. out with sporidia of Ustilago spp. (Bauch 1925). (Teliospores obtained by crossing IFO strains 10034 and 05392. Strains It is clear that dimorphic fimgi formerly placed in the provided courtesy of Dr. I. Banno.) Heterobasidiomycetes do not form a natural group, but the name is convenient to use as an informal category in Chung (Kwon-Chung 1975), Cystofilobasidium (Oberstudies of dimorphic basidiomycetes. Heterobasidiomyce- winkler et al. 1983), and Bulleromyces Boekhout et al. tous yeasts, like ascomycetous yeasts, bud to form soft, (Boekhout et al. 1991a, demonstrated the basidiomycetous often slimy or mucoid colonies. The yeast state usually nature of these organisms. Donk (1973a-c) proposed placement of the basidiocommences with basidiospore germination (e.g., as in Fig. 290) or cells are budded directly from basidia, as in mycetous yeasts in Brefeld's hemibasidiomycetes without species of Agaricostilbum Sind Rhodosporidium (Fig. 291).assigning them to orders. Donk's concept of hemibasidThis unicellular haploid state ends at the initiation of the iomycetes included Ustilaginales, Tilletiales, and Graphidikaryotic state in those yeasts with known teleomorphs. olales. In the previous edition of this book the basidiomycetous The majority of Heterobasidiomycetes with haploid yeast states have dikaryotic mycelia that are parasitic on green yeasts were divided into five groups: 1. Sporobolomycetaceae Derx (both anamorphic and teleomorphic balplants or fiangi. As noted above, budding basidiospores of Tremella and listosporous yeasts), 2. Cryptococcaceae Kiitzing (the Sirobasidium were observed and illustrated in the nine- remaining anamorphic basidiomycetous yeasts), 3. Filobateenth century (Brefeld 1881, 1888, Moller 1895). The sidiaceae L. Olive (teleomorphic yeasts with holobasidia), presence of ballistoconidia in Sporobolomyces Kluyver 4. teliospore-forming yeasts (teleomorphic taxa with & van Niel led Kluyver and van Niel (1924, 1927) teliospores) and 5. Tremellales (yeast stages of genera to suggest that this yeast is basidiomycetous, based on belonging to the Tremellales). Van der Walt (1987) made the morphological resemblance of ballistoconidia with a clear distinction between teleomorphic and anamorphic actively discharged apiculate basidiospores. The discovery basidiomycetous yeasts, which is reflected in his taxoof mating and a sexual state in strains of Rhodotorula nomic concepts (see below). He placed anamorphic yeasts glutinis (Fresenius) Harrison by Banno (1963, 1967), in either the Cryptococcaceae Kiitzing emend, van der and the subsequent discovery of sexual states in species Walt (1987) or the Sporobolomycetaceae Derx emend, van of Rhodosporidium (Fig. 291) and Leucosporidium (Fell der Walt (1987). Basidial morphology is considered an important char1970b, 1974, Fell et al. 1969, 1973), Sporidiobolus Nyland (Nyland 1949, Bandoni et al. 1971, 1975, Fell acter for the affiliation of basidiomycetous yeast genera and Statzell-Tallman 1980b, 1981, 1982), Filobasidium to higher taxa. Transversely septate basidia commonly Olive (Olive 1968, Rodrigues de Miranda 1972, Kwon- occur in yeasts belonging to the Sporidiales, e.g., Chung 1977b, Bandoni et al. 1991), Filobasidiella Kwon- Leucosporidium, Rhodosporidium and Sporidiobolus (Fell

612

Via. Classification of the basidiomycetous

taxa

1984a). However, some of these yeasts have one-celled without Woronin bodies ("simple" pores), or microporebasidia as well, e.g., Sporidiobolus johnsonii (Nyland like structures. 1949, Bandoni et al. 1971, Fell and Statzell-Tallman 1981). Cmciately septate basidia are characteristic for 3. Molecular phylogeny most Tremellales (Bandoni 1987, Oberwinkler 1987), Early molecular studies of 5S ribosomal RNA suggested and occur in Bulleromyes, the teleomorph of Bullera the presence of two main lines of phylogenetic divergence alba (Boekhout et al. 1991a). Holobasidia occur in among basidiomycetous yeasts, which correlates with sepspecies belonging to the Filobasidiales, e.g., Filobasidiella tal ultrastructure (Walker and Doolittle 1982, Templeton (Kwon-Chung 1975, 1987), Filobasidium (Olive 1968), 1983). In more extensive work, including a larger number Cystofilobasidium (Oberwinkler et al. 1983, Hamamoto of heterobasidiomycetous species, the yeast and yeastlike et al. 1988b), and Xanthophyllomyces Golubev (Golubev species were shown to belong to four out of eight clusters 1995). Teliospores (thick-walled probasidia) commonly that correlate well with septal morphology (Walker 1984). occur in the Sporidiales, but have also been found in This has largely been supported by Blanz and Gottschalk filobasidiaceous yeasts, such as Cystofilobasidium and (1984). Two main clusters, one containing Sporidiales and Mrakia (Oberwinkler et al. 1983, Kwon-Chung 1987, Ya- their anamorphs and the other tremellaceous and filobamada and Komagata 1987). Haustorial branches seem to sidiaceous species, can be distinguished from the analysis indicate a Tremellales-Filobasidiales relationship, but the of partial 26S rRNA and from entire 18S rRNA/rDNA haustorial structures of some simple-pored mycoparasites sequences (Fell et al. 1992, 1995, Van de Peer et al. 1992, Suh and Sugiyama 1993b, Sugiyama and Suh 1993, may be functionally similar (Oberwinkler et al. 1990a). Swann and Taylor 1993, 1995a). This clustering correlates Anamorphic yeasts can be assigned to the Basidiowith septal ultrastructure (dolipore versus "simple" pore) mycetes by a number of morphological, biochemical, and cell wall biochemistry (presence or absence of ultrastructural, and physiological criteria. Basidiomycexylose). tous yeasts have a positive Diazonium blue B reaction A comparison of 26S rDNA partial sequences from (Simmons and Ahearn 1987, van der Walt and HopsuHavu 1976, Hagler and Ahearn 1981), contain pyrophos- 145 basidiomycetous yeast species (Fell et al. 1995) phatidic acid (Goto et al. 1988), and in contrast with most demonstrated four main clusters: Sporidiales (nom. nud.), ascomycetous yeasts, show urease activity (Abadie 1961, Tremellales, Cystofilobasidium and related taxa, and the 1967, Roberts et al. 1978, Booth and Vishniac 1987). The Ustilaginales. Within the Sporidiales there was a major presence of ballistoconidia and/or red carotenoid pigments cluster that included Sporidiobolus spp., Rhodosporidium toruloides and related anamorphic and teleomorphic also indicate a basidiomycetous affinity. Other basidiospecies. Other subclusters demonstrated molecular dimycetous characteristics are found in the ultrastructure vergence among the anamorphic and teleomorphic genof the cell wall (Kreger-van Rij and Veenhuis 1971a, era Bensingtonia, Rhodotorula, Sporobolomyces, KurtzSimmons and Ahearn 1987, Boekhout et al. 1992b) and manomyces, Sterigmatomyces, Erythrobasidium, Leucosepta (e.g., Johnson-Reid and Moore 1972, Khan and sporidium and Rhodosporidium. The Cystofilobasidium Kimbrough 1980, Kreger-van Rij and Veenhuis 1971a,b, cluster included a diversity of genera: CystofijobasiMoore and Kreger-van Rij 1972, Kwon-Chung and Popkin dium spp., Mrakia, Trichosporon pullulans, Itersonilia 1976, Moore 1978, 1979, 1987b, Boekhout et al. 1992b), perplexans, Phajfia and Cryptococcus aquaticus. The and in the biochemical composition of the cell wall and Tremellales demonstrated a similar diversity. The genus capsules (Sugiyama et al. 1985, Weijman and Golubev Trichosporon, with the exception of T pullulans, remained 1987, Weijman and Rodrigues de Miranda 1983, 1988, a monophyletic clade as did the separate clades FilobasiSuzuki and Nakase 1988a, Prillinger et al. 1993). diella, Filobasidium and Fellomyces. The genus CryptoIn contrast to most ascomycetous yeasts, the mol% G + C coccus was found to be polyphyletic, and occurred in sevof the majority of basidiomycetous yeasts is above 50 (von eral subclusters. Other genera occurring in the Tremellales Arx 1979b). The coenzyme Q systems are mainly Co-Q 9 cluster were Sirobasidium, Apiotrichum, Holtermannia, and Co-Q 10 (Kuraishi et al. 1985), but lower numbers of Tremella and Bulleromyces. The limited study of the isoprenologs occur. More recently, killer toxin (mycocin) Ustilaginales cluster indicated a similar polyphyletic spectra have been used to characterize basidiomycetous nature, and included the genera Entyloma, Pseudozyma, yeasts. Mycocins of basidiomycetous origin usually act Tilletia, Tilletiaria, Tilletiopsis and Ustilago. only against other basidiomycetous yeasts (e.g., Golubev In a comparison of partial 18S rDNA sequences of 1989a, 1991b, Golubev and Kuznetsova 1989, Golubev basidiomycetous yeasts with entire 18S rDNA sequences and Tsiomenko 1985, Golubev et al. 1988). In summary, of several representatives of Basidiomycetes, the yeasts basidiomycetous yeasts are unicellular fungi belonging to were found to belong to the Tremellomycetidae and the Heterobasidiomycetes, characterized by the presence the Urediniomycetes, respectively (Swann and Taylor of multilamellate electron-dense cell walls, the presence 1995a). Within this latter group, the yeasts belonged to of xylose and/or fiicose in whole-cell hydrolyzates, three clades, namely 1. Agaricostilbum clade (Bensingand the presence of dolipores, or diaphragm-like pores tonia yuccicola), 2. Sporidiales clade {Sporobolomyces

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous

roseus, Leucosporidium scottii, Rhodosporidium toruloides, Rhodotorula glutinis, and 3. Erythrobasidium clade {Erythrobasidium hasegawianum). The detailed phylogenetic relationships among Heterobasidiomycetes with or without yeast states require further biochemical, ultrastructural and molecular investigations. 4. Characterization of orders and families 4.1. Anamorphic basidiomycetous yeasts The anamorphic basidiomycetous yeasts are currently assigned to two families: 4.1.1. Cryptococcaceae Kiitzing (1833) emend, van der Walt (1987): The family is restricted to anamorphic heterobasidiomycetous yeasts and yeastlike fungi; budding is enteroblastic; cell walls are lamellate and hyphal septa have dolipores if perforate; parenthesomes may be present; cell hydrolyzates contain xylose. The type genus is Cryptococcus. Other genera are Bullera, Fellomyces, Kockovaella, Phaffia, Trichosporon, Tschuchiyaea, Udeniomyces and perhaps Hyalodendron and Moniliella. These genera usually assimilate myoinositol and D-glucuronate and produce extracellular starch-like compounds. It can be foreseen that generic concepts will change in the near future as a consequence of the widely divergent ribosomal nucleotide sequences observed in several genera, e.g., Cryptococcus dind Bullera (Gueho et al. 1993, Fell et al. 1992, 1995, Nakase et al. 1993). In contrast, other genera, e.g., Trichosporon, with the exclusion of T. pullulans, were found to be relatively homogeneous (Gueho et al. 1992b). 4.1.2. Sporobolomycetaceae Derx (1948) emend, van der Walt (1987): The family is restricted to anamorphic yeasts and yeastlike fungi; budding is enteroblastic; cell walls are lamellate and hyphal septa are diaphragm-like ("simple") if perforate; cell walls are without xylose, but fucose, rhamnose and galactose may be present. The type genus is Sporobolomyces. Other genera are Bensingtonia, Kurtzmanomyces, Sterigmatomyces and Rhodotorula. These genera usually do not assimilate myoinositol and D-glucuronate, and do not form extracellular starch-like compounds. Sequence divergence of ribosomal RNA (rRNA) or rDNA suggests taxonomic heterogenity for a number of genera, such as Bensingtonia and Sporobolomyces (Nakase et al. 1993, Fell et al. 1992, 1995). These anamorphic families are artificial taxa, which are maintained here for convenience. It can be expected that they will become superfluous when the taxonomy of the anamorphic basidiomycetous yeasts becomes integrated with the teleomorphic Heterobasidiomycetes. The two anamorph families are partly in accord with the Rhodotorulaceae Lodder (1934). However, Lodder's family concept was based on the presence of carotenoid pigments. Recent molecular, biochemical and ultrastructural studies indicate the Rhodotorulaceae is a paraphyletic group.

yeasts / T. Boekhout et al.

613

4.2. Teleomorphic Heterobasidiomycetes with yeast states The Heterobasidiomycetes with yeasts and yeastlike-states are distinguished by basidial morphology, septal pore anatomy, and cell wall composition. The classification of families and orders rests largely on basidial morphology. However, similar basidial types may be present in categories with different septal pores, e.g., the cruciately septate basidium occurs in the Tremellales and Auriculariales. Also, the cylindric, transversely septate basidium occurs in such families and orders as the Auriculariaceae, Platygloeales, Uredinales, Septobasidiales, Ustilaginales, Sporidiales and Tremellales. Presently, the pore structure, which correlates well with molecular data (Swann and Taylor 1993), appears to be a more definitive character. 4.2.1. Sporidiales R.T. Moore (nomen nudum, no Latin diagnosis): This order contains the socalled "saprobic smuts". Nyland (1949) placed Sporidiobolus among the Heterobasidiomycetes. Other teliosporeforming fungi, specifically the rusts and smuts were placed in a separate class, Teliomycetes (Ainsworth 1973) or subclass Teliomycetidae (Alexopoulos and Mims 1979). The life-cycles of the teliospore-forming yeasts are similar to those of the smuts (see, e.g., Banno 1967, Fell 1984a, Fell et al. 1969). Johnson-Reid and Moore (1972) interpreted the teliospores as encysted proasci and named them ustospores. Moore (1972) placed the ustosporeforming fimgi in a separate division Ustomycota (Moore 1972, 1980), characterized by the presence of ustospores and attenuated diaphragm-like ("simple") septa lacking a parenthesome. The Ustomycota were subdivided in the Ustomycetes (smuts) and Sporidiomycetes (yeasts). The latter contained the order Sporidiales, in which two families have been distinguished to accommodate the yeasts and yeastlike fiangi, viz., Sporidiaceae R.T. Moore and Sporidiobolaceae R.T. Moore for non-ballistosporous and ballistosporous teliospore-forming yeasts, respectively (Moore 1980). Recent molecular studies indicate that the Ustomycota are polyphyletic (Swann and Taylor 1993, 1995a). At present, it is appropriate to maintain the teliosporeforming, and phylogenetically related yeasts, in a separate order. We consider the Sporidiaceae and Sporidiobolaceae to be synonymous because they cannot be discriminated by rRNA/rDNA sequence analysis, septal ultrastructure and cell wall biochemistry. We choose Sporidiobolaceae R.T. Moore, with Sporidiobolus Nyland as type, which was the first genus to be described in this family (Nyland 1949). 4.2.1.1. Sporidiobolaceae R.T. Moore (1980) emend, (synonym Sporidiaceae R.T. Moore): This familiy is restricted to teleomorphic yeasts and yeastlike fungi; budding is enteroblastic; dikaryotic mycelium with or without clamp connections, haustorial branches are absent; somewhat thick-walled teliospores are present, basidia are usually transversely septate, but occasionally one-celled; cell walls are lamellate and hyphal septa have

614

Via. Classification of the basidiomycetous

attenuated diaphragm-like ("simple") septa if perforate and without Woronin bodies; no dolipore is present; xylose is absent in whole-cell hydrolyzates, but fucose, galactose and/or rhamnose may be present. The type genus is Sporidiobolus, and other assigned genera are Leucosporidium and Rhodosporidium. Sporidiobolus, a ballistoconidia-forming, teliosporeforming, and carotenoid pigments producing genus (Nyland 1949), was proven to be the teleomorph of the red-pigmented yeast species of Sporobolomyces (Bandoni et al. 1971, 1975, Fell and Statzell-Tallman 1981, Boekhout 1991a). Banno (1963, 1967) described the genus Rhodosporidium, and Fell et al. (1969) published Leucosporidium, the teleomorph genus for the noncarotenoid species Candida scottii. The life cycles include homothallic and heterothallic systems, that may occur within a single species. In the heterothallic system, compatible mating types conjugate and develop a dikaryotic mycelium with clamp connections. Karyogamy takes place in the teliospore, which germinates to a one- to four-celled basidium where meiosis occurs. The heterothallic incompatibility systems are biallelic unifactorial (bipolar), multiple allelic unifactorial or bifactorial (tetrapolar). The homothallic lifecycle is distinguished by dikaryotic hyphal cells that develop from a diploid cell in the absence of mating. Clamp connections may be present, and karyogamy apparently takes place in the teliospore. In Sporidiobolus johnsonii and S. ruineniae, meiosis does not seem to occur in the basidium, which results in diploid basidiospores. In some cases, e.g., in homothallic strains of Rhodosporidium toruloides, the diploid cells appear to originate from a failure during meiosis. The progeny from homothallic Rhodosporidium toruloides are either homothallic or heterothallic. Quantitation of the amount of nuclear DNA by fluorescence cytometry indicates that self-sporulating strains of Leucosporidium scottii are diploid (Suh et al. 1993b). Strains of several yeasts, e.g., Leucosporidium scottii and Sporidiobolus pararoseus, produce teliospores in the absence of mating. Rather than the previously discussed life cycles, the hyphal cells remain uninucleate and clamp connections are lacking. Here, teliospore formation seems the result of monokaryotic fruiting (Fell 1984a). In addition to monokaryotic fruiting, these strains may restore the heterothallic cycle by mating with a compatible strain. The genera Leucosporidium, Rhodosporidium and Sporidiobolus were found to be phylogenetically related to smuts that occur on dicotyledonous hosts (Blanz and Gottschalk 1984). 18S rRNA gene sequences placed Sporidiobolus johnsonii and Leucosporidium scottii in the "simple-septate" lineage, together with Cronartium ribicola (Swann and Taylor 1993). Analysis of 18S and 26S rRNA sequences of teliospore-forming yeasts support the transfer of some species formerly classified in Rhodosporidium and Leucosporidium to Cystofilobasidium, e.g., C. infirmominiatum, C. bisporidii, C. lari-

taxa

marini, C. capitatum, and Mrakia, e.g., M gelidum, M. nivalis, M. frigidum and M. stokesii (Hamamoto et al. 1988b, Fell and Statzell-Tallman 1992, Yamada and Kawasaki 1989a, Suh and Sugiyama 1993b). Some other taxonomic changes based on nucleotide analysis have been proposed, namely Kondoa and Sakaguchia, accommodating Rhodosporidium malvinellum and Rhodosporidium dacryoidum, respectively (Yamada et al. 1989a, 1994a). Kondoa was found to belong to the Agaricostilbum clade, and Sakaguchia (Yamada et al. 1994a) belongs to the Erythrobasidium clade (Swann and Taylor 1995a). Based on partial 26S rRNA sequences, species of Sporidiobolus, Leucosporidium and Rhodosporidium form distinct subclusters among the Sporidiobolaceae, together with anamorphic species belonging to Bensingtonia, Rhodotorula and Sporobolomyces (Fell et al. 1992, 1995). The close phylogenetic relationship among ballistoconidia and non-ballistoconidia-forming species, e.g., Sporidiobolus microsporus and Rhodosporidium fluviale, questions the use of ballistocondia as a useful phylogenetic characteristic among basidiomycetous yeasts. Erythrobasidium hasegawae, which lacks teliospores, has some phenetic characters in common with the teliospore-forming yeasts (Hamamoto et al. 1988c, Suh and Sugiyama 1993b, Sugiyama and Suh 1993), but was found to belong to a separate clade (Swann and Taylor 1995a). Molecular analysis suggests that Heterogastridium pycnidioideum Oberwinkler & Bauer, a teleomorphic heterobasidiomycete with pycnidioid basidiocarps, "simple" septa, and with fucose, but without xylose in the cell wall (H.J. Roeijmans, unpublished observations), and thus far classified in the Heterogastridiales (Oberwinkler et al. 1990b), belongs to the Sporidiales clade (Swann and Taylor 1995a). 4.2.2. Ustilaginales and Tilletiales: Although the economically important smut and bunt fungi have been studied more intensively than many other Heterobasidiomycetes, their classification and relationships remain unclear. Two orders, Ustilaginales and Tilletiales, are often recognized, but they are not generally accepted. Alternatively, when a single order Ustilaginales is used, it is difficult to assign many smut taxa to the families Ustilaginaceae and Tilletiaceae (L.R. Tulasne and C. Tulasne 1847). The Ustilaginales and Tilletiales differ in several important aspects, among which are the basidia, septal pore anatomy, haploid states and conidial types, which support classification in two orders. However, molecular phylogenetic studies suggest a relatively close relationship (Swann and Taylor 1993). Some common genera in temperate areas include Ustilago, Microbotryum, Cintractia, Schroeteria and Sphacelotheca. Ustilago is the largest genus in the order with approximately 300 species, and most species parasitize monocotyledonous hosts. Teliospores of Ustilago spp. typically germinate with a cylindrical, four-celled basidium. Each basidial cell repeatedly buds off basidiospores (sporidia).

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous

which produce the haploid yeast state. TeHospore germination readily occurs in many species, or it can be induced by treatments such as soaking in water or plant extracts (Fischer and Holton 1957). Conjugation can often be seen when compatible cell types are mixed, but the dikaryophase may be unstable in culture and few species have been grown through the complete life history. Basidium maturation in several species occurs without sporidial development, the four basidial cells conjugating directly in two pairs. Yeast states develop in these species only infrequently when one or more basidial cells remain unconjugated. Species of Leucosporidium, Rhodosporidium and Sporidiobolus have a life cycle similar to Ustilago species, but are currently classified in the Sporidiales (see above). Yeastlike anamorphs of Ustilaginales classified in various genera, viz., Candida fusiformata, C. tsukubaensis, Pseudozyma prolifica, Sporobolomyces antarcticus, "Stephanoascus" flocculosus, "S." rugulosus, Sterigmatomyces aphidis and Trichosporon oryzae have been reclassified in Pseudozyma Bandoni emend. Boekhout (Boekhout 1995). Molecular analysis indicates that these taxa form a monophyletic group with Ustilago maydis (Boekhout et al. 1995a, Fell et al. 1995). Tilletia, with about 70 species that mainly parasitize grasses, has a cylindric basidium that is aseptate or sometimes adventitiously septate and bears elongate basidiospores apically. Only one spore per locus is formed. The basidiospores often conjugate before release, in which case the H-shaped conjugants give rise directly to dikaryotic mycelial colonies or, alternatively, conjugation occurs between closely situated compatible pairs after their release. Ballistoconidia often develop on the mycelia. They are produced and abstricted in the manner of basidiospores of most basidiomycetes. The septal pores are often more complex than those of the Ustilaginales, but they do not reach the complexity of dolipores. The anamorphic ballistoconidia-forming genus Tilletiopsis was placed in the Filobasidiaceae by von Arx et al. (1977). This concept is not supported by septal ultrastructure and cell wall biochemistry (Boekhout 1987, Boekhout et al. 1992b). Morphological, biochemical and molecular similarities suggest Tilletiopsis to be related to Tilletiaria, a teliospore- and ballistoconidia-forming genus (Bandoni and Johri 1972, Boekhout et al. 1995a). The hyphal system and the presence of falcate ballistoconidia in these genera strongly resembles that of the Tilletiales (Boekhout et al. 1992b). Placement of Tilletiaria in the Tilletiariaceae Moore (1980) seems appropriate. Budding is unknown or is limited in the Tilletiales, and occurs, e.g., in Tilletiaria anomala (Tilletiariaceae, Tilletiales) and Tilletiopsis washingtonensis (Boekhout 1991a). 4.2.3. Graphiolales: This order contains a small number of poorly-known species of which only the widely spread Graphiola phoenicis has been studied in detail. The fungus produces minute blister-like sori on palm leaves.

yeasts / T. Boekhout et al.

615

Catenate globose cells within the sorus are simple basidia. Meiosis occurs in these cells, and haploid basidiospores bud directly from the basidia to yield yeast colonies. The morphology is unlike that of any other basidiomycete, but it is conceivable that the chains of basidia are homologues of chains of teliospores in the Ustilaginales and of basidial chains in the Sirobasidiaceae. 4.2.4. Cryptobasidiales: Although they are holobasidiate, these fimgi resemble smuts in their life histories. Basidia are found in minute clusters on the infected leaves of Laurales and Rhamnaceae in the case of Coniodyctum species, or of Fagaceae and Juglandaceae for species of Microstroma. The basidiospores, borne on clavate basidia, are not forcibly abstricted, and they give rise to yeast colonies in Coniodyctum chevalieri and in Microstroma juglandis. Other species in these genera have not been studied in detail. 4.2.5. Exobasidiales: This order includes relatively few described species (<100 spp.) and, with the exception of some Exobasidium spp., few are well known. The Exobasidiales, including ca. seven genera in two families, are all plant parasites and found on a variety of plant species. The dikaryotic mycelium grows internally in the host (mostly on leaves of Vacciniaceae in Exobasidium), transforming leaves into hypertrophied, inflated, bladdery structures suggestive of fruits. The fine hyphae have "simple" septal pores and they produce basidia at the surfaces of infected parts. The clavate, non-septate basidia, have stout sterigmata whose curvatures are opposite to those in other basidiomycetes. The basidiospores become septate and germinate by producing conidia successively on narrow outgrowths. Haploid states are unicellular yeasts in some species, but the colonies of others consist of short hyphal segments and are more appropriately described as yeastlike. Exobasidiellum gramineum infects grass leaves; the affected areas are without the hypertrophy associated with Exobasidium infections. The basidia and basidiospores are similar to those of Exobasidium spp. Exobasidium spp. and Laurobasidium lauri (Geyler) Mich apparently have similar cell wall carbohydrate compositions (Prillinger et al. 1990b, Prillinger et al. 1993). L. lauri, is an unusual species inducing clavarioid galls on Laurus azorica in Europe. In addition to the unusual galls, L. lauri has clamp connections, which are absent in Exobasidium. Dicellomyces gloeosporus produces gelatinous tuberculate to discoid basidiomata on the leaf surfaces of canes of Arundinaria spp. in the southern USA. Brachybasidium pinangae also produces pustulate basidiomata, but on Pinanga spp. (Palmae) from Java. The bisterigmate basidia have slightly thickened probasidial walls. These two genera are sometimes put in a separate order, Brachybasidiales (e.g., McNabb and Talbot 1973), but their features are rather close to those of other Exobasidiales (Oberwinkler 1987).

616

Via. Classification of the basidiomycetous

taxa

Fig. 292. (A) Agaricostilbum hyphaenes (Hariot & Patouillard) Oberwinkler & Bandoni (Agaricostilbales), basidiomata, RJB 7760, Thailand. Bar = 0.5 mm. (B) Chionosphaera apobasidialis Cox (Atractiellales), basidiomata, A-A and RJB 9691, Costa Rica. Bar = 0.6 mm. (C) Mycogloea sp. (Platygloeales), RJB 7984, British Columbia. Bar = 0.2 mm. (D) Corticium-likQ basidiomata of an undescribed Septobasidium sp. (Septobasidiales), A-A and RJB 11075, Thailand. Bar= 1.0cm.

4.2.6. Atractiellales sensu lato and Agaricostilbales: The order Atractiellales includes a heterogeneous assortment of fungi. Most species produce minute synnemalike basidiomes (Fig. 292). An exception is Atractogloea stillata Oberwinkler & Bandoni, which has small pustulate basidiomes. Atractiella species described to date are characterized by strictly hyphal growth. The species of Agaricostilbum, placed in the Fungi Imperfecti prior to 1980 (Wright et al. 1981), are xerophytic species growing especially on attached or fallen dead palm parts, or, infrequently, on other monocotyledones. Basidia (Fig. 293) predominantly are produced at or near the apices of synnemata-like structures. The basidia do not arise from teliospores, are mostly four-celled, and the cells bud off multiple spores as in many smuts. Unlike smut basidia, however, the walls thicken with age and the budded basidiospores (also with walls that tend to thicken) mostly remain weakly attached in clusters on their basidial cells. The spores germinate to form rather slimy yeast colonies, but development beyond that is unknown.

Agaricostilbum species are not closely related to other Atractiellales, and they have been segregated into a new order, Agaricostilbales (Oberwinkler and Bauer 1989). This classification is supported by the study of nuclear division (Bauer et al. 1992). Chionosphaera apobasidialis, Stilbum uulgare and Fibulostilbum phylacicola (Chionosphaeraceae) are all presumed to be mycoparasites. C. apobasidialis is found with various dematiaceous fungi on bark of standing trees (Cox 1976). The species is sometimes present on branches falling from the jungle canopy in Costa Rica (R.J. Bandoni, unpublished observation). This species sporulates readily in culture in the absence of associated fungi (Oberwinkler and Bandoni 1982b), producing clavate nonseptate basidia (Fig. 294), each of which bears a terminal cluster of basidiospores. Germination is by budding. Stilbum uulgare, reported from a variety of substrates, is a rather variable species with 2-celled auricularioid basidia (Fig. 295). The basidiospores give rise to yeast colonies (Seifert et al. 1992). Mass spore

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous yeasts / T. Boekhout et al.

617

o-^ -o

Fig. 294. Chionospheara apobasidialis Cox (Atractiellales). (A) Fertile hypha and three basidia, that on the left with attached spores. (B) Young basidium. (C) Basidiospores. A-A and RJB 9691, Costa Rica. Bar= lOjim.

Fig. 293. Agaricostilbum hyphaenes (Hariot & Patouillard) Oberwinkler & Bandoni (Agaricostilbales). (A) Hyphidium. (B) Three mature basidia, two with attached basidiospores. (C) Basidiospores. (D) Diagrammatic portion of basidium showing thick rough walls, budding locus, and attached basidiospore, note very narrow attachment characteristic of many spores in this species. RJB 7760, Thailand. Bar= 10|im.

isolates frequently produce basidiomata in culture, but the details have not been studied. Unusual here is the near absence of a spreading dikaryotic mycelium, and the basidiomata arise at the margins of yeast colonies (R.J. Bandoni, unpublished observation). A strain of this species, isolated from basidiomes of Yucca brevifolia, produced narrow hyphae with haustoria at the surfaces of hyphae from a nearby Cladosporium sp. Fibulostilbum phylacicola produces basidiomata on and around ascomata of Phylacia spp. Attempts to culture the fungus have not been successful. Atractogloea stillata apparently has been collected only once (Oberwinkler and Bandoni 1982c). Although budding was not noted in the original description, a yeast state was reported by Oberwinkler and Bauer (1989). It has a diglobular spindle pole body, and thus differs from other Atractiellales sensu lato. According to Prillinger et al. (1993), the cell wall carbohydrate pattern agrees with the pattern in Cystofilobasidium species and Tremella mesenterica.

ft.

'-.

^ IL

~

^ ' . • •*

Fig. 295. Stilbum vulgare Tode (Atractiellales). (A) Habit sketch of two basidiomata. Bar = 0.1 mm. (B), (C) Developing basidia. Bar=10|im. (D) Mature basidium with attached basidiospores. (E) Basidiospores. J. Simpson and RJB 6852, Australia.

4.2.7. Septobasidiales: Basidiospores of Septobasidium species were first reported to bud by Couch (1938). All species are associated with scale insects on a variety of woody plants. An effused thallus develops on the bark or epidermal surface of the living plants; many scale insects dwell within the thallus or beneath it. Some individual scale insects are parasitized by Septobasidium,

618

Via. Classification of the basidiomycetous taxa

1984). Colacogloea (Platygloea) peniophorae (Fig. 298), which parasitizes corticiaceous hosts, produces abundant dikaryotic conidia and auricularioid basidia on the host hymenium. The yeast state in Platygloea fimicola is pink (R.J. Bandoni, unpublished observations), whereas that of C peniophorae is white. Yeast states also occur in Tjibodasia pezizoidea Holtermann (Holtermann 1898) and in Mycogloea spp. (Olive 1950, Bandoni 1984). Mycogloea includes four described species with gelatinous pustulate basidiomata bearing abundant basidia (Fig. 299). The basidia, cylindric and 2-4-celled, are deciduous at maturity and are thus important disseminules. Unusual is the ability of the basidia to produce either sessile, passively released basidiospores or ballistospores on sterigmata (Olive 1950).

Fig. 296. Septobasidium sp. (A) Two probasidia. (B) Developing 2-celled basidia. (C) Mature basidium, one cell spent and collapsed, and portion of a sterigma with developing spore. (D) Four basidiospores, one of which has become septate during germination to produce yeast phase. (E) Hyphae from context bearing conidial clusters. A-A and RJB 11074, Thailand. Bars = 10 |im.

the fungus producing coiled haustoria within the insect gut. However, most of the insects are unparasitized, moving about freely and reproducing in or under the thallus. Similar haustoria are characteristic of several other auricularioid fungi. Details of the morphology, life histories and biology were included in the monograph by Couch (1938). Many species have typical transversely septate, four-celled basidia similar to those of the rusts, but one- or two-celled basidia (Fig. 296) are characteristic of some species. The basidiospores are born on sterigmata and are abstricted from basidia scattered at the basidiome surface, i.e., not forming a compact hymenium. At germination, yeast colonies develop in species of Septobasidium (Couch 1938) and in Auriculoscypha anacardiicola Reid & Manimohan (Lalitha and Leelavathy 1990). The cupulate basidiomata of A. anacardiicola arise from small tubercles, each of which contains a female coccid. 4.2.8. Platygloeales: The Platygloeales include a variety of fungi with mostly four-celled "auricularioid" basidia, mostly abstricted basidiospores, and effused, pustulate, or clavarioid basidiomes. The ordinal name was badly selected as there is considerable disagreement over the choice of Platygloea vs. Achroomyces for the species which provides the basionym {Platygloea tiliae). The species are saprobes on wood or they parasitize fungi, ferns, mosses, or vascular plants. Most species have haploid hyphal phases, so far as is known, but Cystobasidium lasioboli that parasitizes Lasiobolus sp. on dung, was reported to have a yeast state (de Lagerheim 1898), as does Platygloea fimetaria^ (Fig. 297) (Bandoni

4.2.9. Tremellales: The Tremellales include three families, the largest of which, the Tremellaceae, comprises 5 genera and ca. 500 binomials, of which perhaps 150 are distinct species. Primarily on the basis of field observations, the species are thought to be mycoparasites that occur on ascomycetes or basidiomycetes, especially those colonizing recently killed woody twigs, and on lichens. Species of Tremella occur in dacrymycetaceous basidiocarps (Figs. 300, 301), on hymenia of polypores.

A I

Fig. 297. Platygloea fimetaria (SchumacheriPersoon) Hohnel (Platygloeales). (A) Thin-walled probasidia with basidial initials. (B) Developing basidia. (C) Portion of mature basidium with attached basidiospore. (D) Basidiospores, one germinating by repetition. RJB 693, Canada. Bar=10|J,m.

Platygloeafimetariamay be a synonym of Cytobasidium lasioboli, but this is not yet certain.

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous

Fig. 298. Colacogloea peniophome (Bourdot & Galzin) Oberwinkler & Bandoni. (A) Fertile hypha with basidium (top) and lateral branch with conidiogenous cells. (B) Mature 4-celled basidia, one with developing epibasidium. (C) Blastic conidial production and a pair of freed conidia. (D) Second form of conidial development and freed conidium. (E) Two basidiospores. RJB 74-7, Iowa. Bar= lOpim.

on hymenia of corticioid fungi (Fig. 302), growing from perithecial ostioles or on pyrenomycete stromata, in apothecia of bitunicate ascomycetes, and on lichen thalli. Some species (e.g., Tremella mesenterica, Fig. 302), grow on wood often with no conspicuous physical contact with other fungi. In T. mesenterica, however, haustorial branches can often be found attached to structures of nearby fungi. Tremella is not a natural genus as is apparent from both morphological studies and biochemical analyses. However, few species have been examined intensively by any method. Bulleromyces Boekhout & A. Fonseca (Boekhout et al. 1991a), a recently added taxon in the Tremellaceae, is based upon a teleomorph obtained by mating strains of Bullera alba. The single species, Bulleromyces albus, produces dikaryotic hyphae when compatible strains are mated in culture. Basidiocarps are not produced, but typical tremellaceous basidia develop on the hyphae, which may produce buds or ballistospores. Other characteristics are the presence of TremellaAxkQ haustorial branches, dolipores with a cupulate parenthesome, assimilation of myo-inositol and D-glucuronate, and the production of extracellular starch-like compounds. Partial 26S rRNA se-

yeasts / T. Boekhout et al.

619

Fig. 299. A-B Mycogloea sp., RJB 7984, Canada. (C)-(F) M tahitiensis Olive, RJB 7270, Japan. (A) Two fertile branches showing the minute probasidia and young developing basidia. Note the probasidial vestiges (arrows) left after basidia are released. (B) Two mature detached basidia. (C) Portion of mature basidium with one spent cell and the second with a sterigma. (D) Two basidiospores. (E) Basidiospore attached to sterigma and apparently germinating. (F) Budding basidiospore. Bar= lOjim.

Fig. 300. Tremella mesenterica Retzius:Persoon. (A) Portion of hymenium showing a single probasidium and hyphae with conidiogenous cells. (B) Two basidiospores. (C) Germinating basidiospores, the retained primary outgrowths producing buds. (D) Germinating basidiospore and mature basidium. A-B, Bethel, San Diego, NYBG; C-D, RJB 7934 and 1839, respectively, Canada. Bars= lO^im.

620

Via. Classification of the basidiomycetous taxa

quences of the anamorph Bullera alba, suggest B. albus to have a close phylogenetic relationship with Cryptococcus laurentii (Fell et al. 1992). Van de Peer et al. (1992) found' Bullera alba to be a sister species of Filobasidiella neoformans based on the entire 18S ribosomal RNA sequences. Trimorphomyces, a monotypic genus, differs from Tremella by having a distinctive dikaryotic yeast state in addition to the haploid one (Figs. 303, 304). The minute basidiomes typically have mixed conidia and basidia, with the latter generally present in low numbers. Conidiogenesis is identical to bud development in the dikaryotic yeast cells. The conidia can give rise directly to a dikaryotic yeast state upon germination. Phyllogloea tremelloidea Lowy, a species with "auricularioid" basidia, but with Tremella-typQ dolipore septa, belongs in the Tremellaceae (F. Oberwinkler, personal communication), as do the species of Xenolachne Rogers. Fig. 301. Tremella mycophaga var. obscura Olive growing (stippled structures) in basidiome of Dacrymyces stillatus Nees:Fries. The hyphae The latter have haustorial branches of the Tremella type bear basidia and phialide-like conidiogenous cells (upper arrow). Note and are parasites of discomycetes. Yeast phases are haustorial branches and attachment of filaments to host basidia (lower unknown in these species, although budding has been arrows). L.S. Olive, Type, Georgia. Bar=10|im. observed in both groups.

Fig. 302. Tremellales. (A) Sirobasidium magnum Boedijn basidiocarp, A-A and RJB 9082, Taiwan. Bar= 1 mm. (B) Young basidiome of Sirotrema pusila Bandoni developing in the hymenium of a Lophodermium ?pacificensis ascoma, RJB 2233, Canada. Bar = 0.5 mm. The swelling basidiome destroys much of the ascocarp and often obscures the entire structure at maturity. (C) Basidiome of Tremella mesenterica Retzius:Persoon, RJB 7938. Bar= 1 cm. (D) Basidiomata of Tremella mycetophilloides Kobayasi (arrows) growing on hymenia of young Aleurodiscus amorphus (Persoon:Fries) Schroeter, basidiocarps, RJB 5277, Canada. Bar = 0.5 mm.

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous yeasts / T. Boekhout et al.

621

Fig. 303. Trimorphomyces papilionaceus Bandoni & Oberwinkler. (A) Gelatinous basidiomata scattered on a small culm ofdiSasa sp. (some marked by arrows), RJB 7526, Japan. Bar = 0.5 mm. (B) Two dikaryotic yeast cells (arrows) germinating in the presence of host hyphae (not visible); the lower cell is much distorted, its form characteristic of older cells that have produced many buds (a mature bud is attached to it on the left). Each germinating cell has produced a short hypha and haustorial branch; ungerminated dikaryotic yeast cells are present on the right, culture of RJB 6646, Type, Canada. Bar = 5 ^im. (C) Holtermannia sp., basidiocarps, A-A and RJB 9832, Thailand. Bar = 0.5mm. Photo courtesy of Dr. T. Flegel.

Holtermannia species have basidiomes composed of aggregates of erect, simple or branched teeth. Although mycoparasitism was not mentioned by Kobayasi (1937) in his monograph, a common Thai species occurs only on shelving polypore basidiocarps or on wood heavily

-^-S'^^^

00

' F

Fig. 304. Trimorphomyces papilionaceus Bandoni & Oberwinkler. (A)-(C) Conidiogenous cells and developing dikaryotic conidia from basidiome. (D) Two basidia. (E) Face view of H-shaped conidia. (F) Conidia in end view, RJB 7526, Japan. Bar= 10|im.

decayed by a white pocket rot fungus (RJ. Bandoni, unpublished observations). Species ofSirotrema Bandoni (1986) grow in the hymenia of phacidiaceous apothecia (Figs. 302, 305), producing minute gelatinous basidiomata. The basidia often occur in short chains and the epibasidia are retained on the basidia. Sirotrema has some intermediate characteristics between the Tremellaceae and Sirobasidiaceae which, taken with other intermediate taxa currently placed in Tremella, suggests that the family Sirobasidiaceae is superfluous. However, recent molecular studies (E.C. Swann, personal communication) indicate a more distant relationship and additional analyses are needed. The second family of Tremellales with a yeast state, the Sirobasidiaceae, currently contains only two genera, Sirobasidium and Fibulobasidium. In Sirobasidium, basidia are catenate (Figs. 306, 307), maturing basipetally from successive lower cells of fertile hyphae. The basidiospores, clavate to fusiform and passively released, are probably homologs of Tremella epibasidia (Bandoni 1957). Fibulobasidium basidia develop by direct expansion of successively formed clamp connections with the basidia laterally fused (Fig. 308). Basidiomata of Sirobasidium spp. are exposed and conspicuous, whereas those of Fibulobasidium species are subcortical on recently killed branches. As in Sirobasidium , the fiisiform, passively released basidiospores of F inconspicuum can germinate either by budding or by producing a sterigma and ballistospore.

622

Via. Classification of the basidiomycetous taxa

Fig. 305. (A)-(D) Sirotrema paruula Bandoni. (A) Fertile hyphae with basidia and probasidia (note catenate basidial pair, upper left). (B) Typical (abstricted) basidiospores. (C) Production of passivelyreleased basidiospores. (D) Haustorial branches. (E) Basidia of 5. pusilla Bandoni in catenate pairs, the intercalary ones ftinctional. A-D, RJB 7478; E, RJB 2233, Canada. Bars= lOfxm.

Fig. 306. Sirobasidium magnum Boedijn. (A) Young basidial chains, the terminal cells partially expanded. (B) Mature basidial chains. (C) Basidium with attached basidiospores. (D) Basidiospores, the lowermost germinating by ballistospore formation. (E) Ballistospore. A-A and RJB 9082, Taiwan. Bar= 10 (im.

Fig. 307. Sirobasidium brefeldianum Moller. (A), (B) Chains of twocelled basidia (typical of this species). (C) Three-(? or four-)celled basidia (atypical), (D) Basidiospores. (E) Ballistospores. (F) Developing ballistospore. A-B + D-F, A-A and RJB 9708; C, A-A and RJB 9495A, Costa Rica. Bar= 10|im.

Fig. 308. Fibulobasidium inconspicuum Bandoni. (A) Developing basidia, the youngest (arrow) in the pair formed by direct expansion of the basal clamp of the first basidium. (B) Two detached basidia with developing basidiospores. (C) Two germinating basidiospores, that on the left germinating by both budding and ballistospore formation. (D) Ballistospores, two germinating by budding. RJB 6075, Louisiana. Bar^lO^im.

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous yeasts / T. Boekhout et al.

623

Itersonilia Derx, an anamorphic genus placed by von Arx et al. (1977) in the Filobasidiaceae, appears to be related to the Tremellales/Filobasidiales because of its dolipore septum and the presence of xylose in wholecell hydrolyzates. However, a parenthesome is absent, and molecular data suggest a more distant relationship (Fell et al. 1995). Sterigmatosporidium polymorphum Kraepelin and Schulze (1982) also seems related to the Tremellales or Filobasidiales. 4.2.10. Filobasidiales: The Filobasidiales, which appear to be closely related to the Tremellales, lack conspicuous basidiocarps and have holobasidia and passively released basidiospores. They have the Tremella-typQ haustorial branches. Most species with yeast states are placed in the family Filobasidiaceae L.S. Olive (1968) but some are also classified in the Syzygosporaceae Mich. The order is restricted to teleomorphic, heterobasidiomycetous yeasts and yeastlike fungi. Budding is enteroblastic and hyphae usually form clamp connections and haustorial branches; teliospores are usually absent; holobasidia are clavate with sessile basidiospores; cell walls are lamellate and hyphal septa, if perforate, have dolipores; parenthesomes, if present, are cupulate; xylose is present in wholecell hydrolyzates. The type genus is Filobasidium; other genera belonging here are Filohasidiella and probably Cystofilobasidium, Mrakia and Xanthophyllomyces Golubev (Golubev 1995). Based on basidial morphology and the manner in which dikaryotization occurs in Filobasidium floriforme, Olive (1968) placed the Filobasidiaceae in the Ustilaginales, which in his concept included both Ustilaginaceae and Tilletiaceae. The family was established to accommodate Filobasidium floriforme, found in a culture dish in which dead florets of Erianthus giganteus had been placed (Olive 1968). Three species of Filobasidium on Yucca breoifolia (Fig. 309) produce aggregates of basidia that can readily be seen with low magnification (Bandoni et al. 1991). Filobasidiella, containing the only animal parasitic species known in the group, has basidia like those in Filobasidium spp., but basidiospores develop in basipetal chains. Haustorial branches are found in Filobasidiella neoformans, suggesting that the species primarily is a fimgal parasite and secondarily acts as an opportunistic animal pathogen. Thick-walled teliospores are present in Cystofilobasidium, but are absent in the remaining genera of the Filobasidiales. Cystofilobasidium has Co-Q 8, Filobasidiella and Xanthophyllomyces Co-Q 10 (Sugiyama et al. 1985), and Filobasidium either Co-Q 9 or 10 (Yamada and Kondo 1972a, 1973). Filobasidium capsuligenum and Xanthophyllomyces dendrorhous (anamorph Phqffia rhodozyma) are able to ferment glucose, whereas the remaining taxa are unable to ferment carbohydrates. All taxa assimilate mj^o-inositol

Fig. 309. Filobasidium globosporum Bandoni & Oberwinkler (Filobasidiales). (A) Two spent basidia. (B) Young basidium. (C) Upper portion of basidium with spores still attached. (D) Adherent basidiospores as released from basidia. A-A and RJB 8197B, California. Bar= lOjim.

and D-glucuronate, and produce extracellular starch-like compounds. The species are either homothallic or heterothallic, the latter apparently controlled by biallelic unifactorial mating systems. Upon conjugation, clamped dikaryotic hyphae develop, which may form haustorial branches. Basidia are clavate, and basidiospores are formed terminally. Species of the Filobasidiaceae differ from the Sporidiobolaceae by the presence of dolipores and the presence of xylose in their cell walls (Sugiyama et al. 1985, Boekhout et al. 1992b, 1993, Prillinger et al. 1993). Cox (1976) proposed transferring the Filobasidiaceae to the Aphyllophorales (Holobasidiomycetes/Homobasidiomycetes), because of the presence of holobasidia. Jiilich (1981) established the order Filobasidiales to accommodate the Filobasidiaceae, without indicating the demarcation between Filobasidiales and Tremellales. The Filobasidiaceae were considered by Oberwinkler (1987) to be sufficiently close to the Tremellales to constitute a family in that order. This interpretation has since been supported by comparison of 18S rRNA gene sequencing studies (Swann and Taylor 1993). Subdivision of the basidiomycetes based on basidial morphology is no longer accepted because basidial form and septation appear to be less reliable criteria than septal pore ultrastructure and ribosomal DNA sequences for determining relationships among these fungi (Bandoni 1984, Walker 1984, Gottschalk and Blanz 1985, Fell et al. 1992). The distinction of Filobasidiales and Tremellales is not

624

Via. Classification of the basidiomycetous taxa Table 66 Summary of basidiomycetous yeast groups

Characteristic Order Family Genus

Teleomorphic taxa /. With "simple " septal pores A. Basidia cylindric, transversely septate Ustilaginales Ustilaginaceae Microbotryum Schizonella Sorosporium Sphacelotheca Sporisorium Ustilago Ustilentyloma and probably with Ustilago-typQ basidia^ Sporidiales Sporidiobolaceae Leucosporidium Rhodosporidium Sporidiobolus lErythrobasidium IKondoa ISakaguchia Platygloeales Cystobasidiaceae Colacogloea Cystobasidium Kriegeria ^ Mycogloea Occultifer Tijbodasia Septobasidiales Septobasidiaceae Auriculoscypha Coccidiodictyon ^ Ordonia^ Septobasidium Atractiellales'^ Chionosphaeraceae Chionosphaera Stilbum Atractogloeaceae Atractogloea Agaricostilbales Agaricostilbaceae Agaricostilbum B. Basidia globose, nonseptate Graphiolales Graphiolaceae Graphiola C. Basidia cylindric, nonseptate Cryptobasidiales Cryptobasidiaceae Conyodyctum Cryptobasidium

Characteristic Order Family Genus Microstromaceae Microstroma Exobasidiales Exobasidiaceae Brachybasidium Dicellomyces Exobasidiellum Exobasidium Laurobasidium II. With dolipore septa, parenthesomes A. Basidia "cruciate-septate" Tremellales Sirobasidiaceae Fibulobasidium Sirobasidium Tremellaceae Bulleromyces Iters onilia^ Holtermannia Phyllogloea Sirotrema Tremella Trimorphomyces B. Basidia aseptate Filobasidiales Filobasidiaceae Cystofilobasidium ^ Filobasidiella Filobasidium Mrakia Xanthophyllomyces Syzygosporaceae Christiansenia Syzygospora

cupulate

Anamorphic taxa Sporobolomycetaceae Bensingtonia pro parte Kurtzmanomyces Rhodotorula pro parte Sporobolomyces pro parte Sterigmatomyces Cryptococcaeae Bullera Cryptococcus Fellomyces Kockouaella

Phaffia Trichosporon Tsuchiyaea Udeniomyces IHyalodendron IMoniliella

continued on next page

74. Discussion of teleomorphic and anamorphic genera of heterobasidiomycetous

yeasts / T. Boekhout et al.

625

Table 66, notes ^ Although economically important smuts have been studied in detail, type of teliospore germination is unknown in many species. Direct conjugation of basidial cells occurs in some taxa with Ustilago-XikQ basidia and this can result in the complete absence or infrequent occurrence of a yeast state. ^ Kriegeria (Xenogloea) eriophori (monotypic) parasitizes monocots; its relationship to the mycoparasitic taxa placed in the Cystobasidiaceae and to most other Platygloeales, may be distant. ^ Yeast states probably occur in these two genera. ^ Basidia can be cylindric, transversely septate (e.g., in Stilbum), or clavate, holobasidia (e.g., as in Chionosphaera). ^ Itersonilia perplexans appears to belong in this group (but see also under f), but basidia have not been found. Because of the known features, and the rather isolated position among anamorphic yeast groups, it is classified with the Tremellales here. ^ Cystofilobasidium has thick-walled teliospores which germinate with holobasidia. Because of biochemical traits such as cell wall composition, dolipores without parenthesomes, and apparently unique molecular characteristics, we tentatively place the genus here. Recent partial 26S rDNA sequences (Fell et al. 1992, 1995) suggest a more distant relationship between Cystofilobasidium, Mrakia, Xanthophyllomyces and Itersonilia on one side with the Tremellales and the genera Filobasidium and Filobasidiella on the other.

supported by partial 26S rRNA sequences (Fell et al. 1992, 1995, Gueho et al. 1993), nor by 18S rDNA sequences (Swann and Taylor 1993). For definitive conclusions, more taxa need to be studied with molecular methods. Therefore, and for reasons of convenience, we maintain the Filobasidiaceae in the Filobasidiales, as they are represented by a number of morphologically uniform genera, which share holobasidia, lack ballistospores, mostly lack basidiocarps and frequently have a different ecology. Recent molecular analyses suggest that the teliosporeforming taxa, such as Cystofilobasidium and Mrakia, do not form a monophyletic group with Filobasidiella and Filobasidium (Fell et al. 1995, Swann and Taylor 1993, 1995a). Filobasidium and Filobasidiella are characterized by haustorial branches (Olive 1968, Kwon-Chung 1975) similar to those seen in Tremella, and the septal pore apparatus is also similar in the two groups (Moore and Kreger-van Rij 1972, Bandoni 1987, Moore 1978, 1987b, Khan 1976, Patrignani et al. 1984). Moreover, species of Filobasidium and Filobasidiella produce an extracellular polysaccharide with a chemical structure similar to that occurring in Tremella species (Battacharjee et al. 1978), and extracellular enzymes, such as deoxyribonuclease produced by Filobasidium and Filobasidiella are also found in Tremella species. The main differentiating character between the Filobasidiales and Tremellales is the presence of holobasidia in the first group, whereas the second group usually has cruciately septate basidia (Oberwinkler 1987, Bandoni 1987).

Syzygospora and Christiansenia species parasitize basidiomycetes or ascomycetes, inducing tumor-like swellings in some hosts, e.g.. Christians enia spp. on Collybia dryophila (Ginns and Sunhede 1978). Basidiocarps and yeast states of Syzygospora alba Martin are similar to those of some Tremella spp. Haploid states of Christiansenia species examined by Ginns (1986) were "yeastlike" and similar to those in some species of Exobasidium, but a yeast state is known in C. pallida (Oberwinkler et al. 1984). The haustorial apparatus in this species is similar to that in tremellaceous fungi (Bauer and Oberwinkler 1990b). In the previous edition of this book, the genus Chionosphaera was included in the family Filobasidiaceae based on Cox's description of the genus. Chionosphaera, however, has been transferred to the Chionosphaeriaceae (Atractiellales, see above) by Oberwinkler and Bandoni (1982c). Chionosphaera apobasidialis, the type species, does not fit into the Filobasidiaceae, because of the presence of capitate basidiocarps, the absence of dolipores, and the inability to assimilate mj^o-inositol. The monotypic genus Rogersomyces was placed in the family Filobasidiaceae by Crane and Schoknecht (1978). This genus does not fit into the Filobasidiaceae, since R. okefenokeensis produces holobasidia with basidiospores formed on sterigmata. The system of classification accepted for heterobasidiomycetous taxa in the present edition of The Yeasts, is outlined in Table 66.

This Page Intentionally Left Blank

Chapter 75

Diagnostic descriptions and key to presently accepted heterobasidiomycetous genera T. Boekhout Contents 1. Diagnostic descriptions 627 2, Key to the heterobasidiomycetous genera with yeast states . .. 632

1. Diagnostic descriptions 1.1. Teleomorphic genera 1.1.1. Agaricostilbum: Vegetative reproduction: Yeast colonies are yellowishcream and butyrous. Yeast cells are ellipsoidal-fusoidal, sometimes adhering in chains and with polar budding. Sexual reproduction: Basidiocarps are synnemata-like. Hyphae lack clamp connections. Basidia are cylindrical, 4-celled and transversely septate, with the basidiospores laterally budding off (Figs. 292A, 293). Septal pores are "simple". Physiology: Fermentation is absent. D-Glucuronate is assimilated, myo-inositol and nitrate are not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q is not determined. Xylose is absent in whole-cell hydrolyzates. 1.1.2. Bulleromyces: Vegetative reproduction: Yeast colonies are cream-colored and butyrous to mucoid. Yeast cells are ellipsoidal, subglobose to cylindrical with polar budding; pseudohyphae may be present. Ballistoconidia are rotationally symmetrical. Sexual reproduction: Basidiocarps are absent. Hyphae have clamp connections. Basidia are tremelloid with 2-A cells. Septal pores are dolipores with cupulate parenthesomes. Physiology: Fermentation is absent. D-Glucuronate and myo-mo^\Xo\ are assimilated; nitrate is not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates.

Basidia are 1-celled and clavate, with sessile basidiospores (Figs. 292B, 294). Septal pores are "simple". Physiology: Fermentation is absent. D-Glucuronate, myoinositol and nitrate are not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Cellwall composition is not determined. 1.1.4. Cystofilobasidium: Vegetative reproduction: Yeast colonies are orange, salmon, cinnamon or pale. Yeast cells are ovoidal to elongate, and pseudohyphae may be present. Sexual reproduction: Basidiocarps are absent. Hyphae may or may not have clamp connections. Endospores are sometimes present. Teliospores are present. Basidia are 1-celled, and clavate or capitate. Septal pores are dolipores without parenthesomes. Physiology: Fermentation is usually absent. D-Glucuronate, mjo-inositol and nitrate are assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-8 is formed. Xylose is present in whole-cell hydrolyzates. 1.1.5. Erythrobasidium: Vegetative reproduction: Yeast colonies are orange-red. Yeast cells are ovoidal to elongate, and have multilateral budding. Sexual reproduction: Basidiocarps are absent. Hyphae have pseudoclamp connections. Basidia are 1-celled. Septal pores are "simple". Physiology: Fermentation is absent. D-Glucuronate and nitrate are assimilated, but mjo-inositol is not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q- 10(H2) is formed. Xylose is absent in whole-cell hydrolyzates. 1.1.6. Fibulobasidium: Vegetative reproduction: Yeast colonies are grayish to brownish-yellow, and butyrous. Yeast cells are subglobose to globose. Ballistoconidia are rotationally symmetrical. Sexual reproduction: Basidiocarps are pulvinate and gelatinous. Hyphae have clamp connections. Basidia are tremelloid, occur in chains and develop from successively formed basal clamp connections of earlier basidia (Fig. 308). Septal pore structure is not known.

1.1.3. Chionosphaera: Vegetative reproduction: Yeast colonies are cream-colored and butyrous to mucoid. Yeast cells are ellipsoidal to allantoidal and have polar budding. Sexual reproduction: Basidiocarps are stilbelloid, waxyarid or subgelatinous. Hyphae lack clamp connections. 627

628

Via. Classification of the basidiomycetous

Physiology: Fermentation is absent. D-Glucuronate and wy6>-inositol are assimilated; nitrate assimilation is absent or weak. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 is formed. Cell-wall composition is not determined. 1.1.7. Filobasidiella: Vegetative reproduction: Yeast colonies are whitish to yellowish-cream and usually mucoid. Yeast cells are globose, ovoidal, apiculate, and have polar or multilateral budding. Sexual reproduction: Basidiocarps are absent. Hyphal colonies, if present, are whitish and velutinous. Hyphae usually have clamp connections. Basidia are 1-celled and stipitate-capitate with basipetally formed chains of basidiospores. Septal pores are dolipores with or without cupulate parenthesomes. Physiology: Fermentation is absent. D-Glucuronate and mj^o-inositol are assimilated; nitrate is not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates. 1.1.8. Filobasidium: Vegetative reproduction: Yeast colonies are white, cream or pinkish and mucoid. Yeast cells are globose, ovoidal, ellipsoidal or elongate. Pseudohyphae may be present. Sexual reproduction: Basidiocarps are absent. Hyphae have clamp connections. Basidia are 1-celled and clavate, with sessile basidiospores (Fig. 309). Septal pores are dolipores with or without cupulate parenthesomes. Physiology: Fermentation may be present. D-Glucuronate, wjKo-inositol and nitrate are sometimes assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 or 10 are formed. Xylose is present in whole-cell hydrolyzates. 1.1.9. Holtermannia: Vegetative reproduction: Yeast colonies are yellowishwhite and mucoid. Yeast cells are ellipsoidal and have polar budding. Sexual reproduction: Basidiocarps are erect, coralloid, gelatinous, and occur in dense aggregates (Fig. 303C). Hyphae have clamp connections. Basidia are tremelloid. Septal pore structure is not known. Physiology: Fermentation is absent. D-Glucuronate and mj^o-inositol are assimilated; nitrate is not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q is not determined. Xylose is present in whole-cell hydrolyzates. 1.1.10. Leucosporidium: Vegetative reproduction: Yeast colonies are cream-colored and mucoid. Yeast cells are ovoidal to elongate and pseudohyphae may be present.

taxa

Sexual reproduction: Basidiocarps are absent. Hyphae usually have clamp connections. Teliospores are present. Basidia are transversely septate. Septal pores are "simple". Physiology: Fermentation is absent. D-Glucuronate is sometimes assimilated; mj^o-inositol is not assimilated; nitrate is assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 or 10 are formed. Xylose is absent in whole-cell hydrolyzates. 1.1.11. Mrakia: Vegetative reproduction: Yeast colonies are whitish or cream-colored and mucoid. Yeast cells are ovoidal to elongate, and pseudohyphae may be present. Sexual reproduction: Basidiocarps are absent. Hyphae lack clamp connections. Teliospores are present. Basidia are 1-celled or transversely septate. Septal pores are dolipores without parenthesomes. Physiology: Glucose and sometimes galactose may be fermented. D-Glucuronate and nitrate are assimilated, and myo-inosito\ is sometimes assimilated. Starchlike compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-8 is formed. Xylose is present in whole-cell hydrolyzates. Maximum temperature of growth is below 20''C. 1.1.12. Rhodosporidium (this treatment includes Kondoa and Sakaguchia): Vegetative reproduction: Yeast colonies are orange, red or yellowish, and butyrous to mucoid. Yeast cells are ovoidal to elongate, and pseudohyphae may be present. Sexual reproduction: Basidiocarps are absent. Hyphae may or may not have clamp connections. Teliospores are present. Basidia are transversely septate (Fig. 291). Septal pores are "simple". Physiology: Fermentation is absent. D-Glucuronate and nitrate are sometimes assimilated, but wj^o-inositol is not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 or 10 are formed. Xylose is absent in whole-cell hydrolyzates. 1.1.13. Sirobasidium: Vegetative reproduction: Yeast colonies are yellowish to yellowish-cream and mucoid. Yeast cells are ellipsoidal to subglobose and have polar budding. Ballistoconidia are bilaterally symmetrical. Pseudohyphae may be present. Sexual reproduction: Basidiocarps are pulvinate to irregularly lobed or foliaceous. Hyphae have clamp connections. Basidia are tremelloid, occur in chains, and mature basipetally from contiguous cells of fertile hyphae (Figs. 302A, 306, 307). Septal pores are dolipores with cupulate parenthesomes. Physiology: Fermentation is absent. D-Glucuronate and myo-inositol are assimilated; nitrate is not assimilated. Starch-like compounds are produced. Diazonium blue B

75. Diagnostic descriptions and key to presently accepted heterobasidiomycetous

and urease reactions are positive. Coenzyme Q and cellwall composition are not determined. 1.1.14. Sporidiobolus: Vegetative reproduction: Yeast colonies are reddish to pink. Yeast cells are ellipsoidal to elongate and have polar budding. Ballistoconidia are bilaterally symmetrical. Pseudohyphae may be present. Sexual reproductions: Basidiocarps are absent. Hyphae usually have clamp connections. Teliospores are present. Basidia are usually transversely septate, but sometimes 1-celled. Septal pores are "simple". Physiology: Fermentation is absent. D-Glucuronate and mjvo-inositol are not assimilated; nitrate is sometimes assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is lacking in wholecell hydrolyzates. 1.1.15. Sterigmatosporidium: Vegetative reproduction: Yeast colonies are cream-colored and butyrous. Yeast cells are ellipsoidal to elongate, and have polar budding, usually on stalks with the septa at the distal end. Pseudohyphae are present. Sexual reproduction: Basidiocarps are absent. Hyphae have clamp connections. Dikaryotic chlamydosporelike structures are present. Basidia-like structures are 1-celled. Septal pore structure is not known. Physiology: Fermentation is absent. D-Glucuronate and mjo-inositol are assimilated; nitrate is not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates. 1.1.16. Tilletiaria: Vegetative reproduction: Colonies are grayish-brown and tough. Yeast cells are absent. Hyphae lack clamp connections. Chlamydospores are present. Ballistoconidia are bilaterally symmetrical. Sexual reproduction: Basidiocarps are absent. Teliospores are echinulate and brown. Basidia are transversely septate. Septal pores are "primitive" dolipores without parenthesomes. Physiology: Fermentation is absent. D-Glucuronate is assimilated, but mjvo-inositol and nitrate are not assimilated. Starch-like compounds are not produced. Diazonium blue B reaction is not determined, but the urease reaction is positive. Coenzyme Q-10 is formed. Xylose is absent from whole-cell hydrolyzates. 1.1.17. Tremella: Vegetative reproduction: Yeast colonies are cream-colored to pale brown and mucoid. Yeast cells are ellipsoidal, subglobose to globose, and have polar or multipolar budding. Pseudohyphae may be present. Sexual reproduction: Basidiocarps are usually foliaceous, effuse, pulvinate or cerebriform, but may be absent in some taxa. Hyphae usually have clamp connections. Basidia are tremelloid (Figs. 290A-G, 300, 301,

genera / T. Boekhout

629

302C,D). Septal pores are dolipores with cupulate parenthesomes. Physiology: Fermentation is absent. D-Glucuronate and myo-inositol may or may not be assimilated, but nitrate is not assimilated. Starch-like compounds may or may not be produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates. 1.1.18. Trimorphomyces: Vegetative reproduction: Haploid yeast colonies are pale pinkish-yellow to pinkish-brown and butyrous. The cells are subglobose, ellipsoidal, somewhat triangular, or elongate, and have polar or multipolar budding. Dikaryotic yeast colonies are of similar appearance, but the yeast cells here are H-shaped in most strains. The H-shaped cells develop synchronously as closely situated, mostly polar "twins"; they conjugate before maturity and are released as new H-shaped cells (Fig. 304). Sexual reproduction: Basidiocarps are small, pulvinate, and occur associated with Arthrinium on bamboo and other grasses. Hyphae have clamp connections. Basidia are tremelloid (Figs. 303A,B, 304). Septal pores are dolipores with cupulate parenthesomes. Physiology: Fermentation is absent. D-Glucuronate is assimilated, myo-inositol is sometimes assimilated, but nitrate is not assimilated. Starch-like compounds are sometimes produced. Diazonium blue B and urease reactions are positive. Coenzyme Q is not determined. Xylose is present in whole-cell hydrolyzates. 1.1.19. Xanthophyllomyces: Vegetative reproduction: Yeast colonies are orange to salmon-red and butyrous. Yeast cells are ellipsoidal. Pseudohyphae and chlamydospores may be present. Sexual reproduction: Basidiocarps are absent. Hyphae are absent. Basidia originate from conjugation between a cell and its bud, and are 1-celled. Physiology: Fermentation is present. D-Glucuronate is assimilated, but myo-inositol and nitrate are not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates. 1.2. Anamorphic genera 1.2.1. Bensingtonia: Vegetative reproduction: Colonies are whitish, pinkish, ochraceous, brown to grayish-red, and butyrous. Yeast cells are ellipsoidal, ovoidal to elongate, and usually have polar budding. Ballistoconidia are bilaterally symmetrical. Chlamydospores, hyphae and pseudohyphae may be present. Septal pores, if present, are "simple" (teliospore formation has been observed in matings of B. intermedia, personal communication, W.I. Golubev). Physiology: Fermentation is absent. D-Glucuronate and

630

Via. Classification of the basidiomycetous taxa

1.2.5. Hyalodendron (possibly synonymous with Trichosporon, G.S. de Hoog, personal communication): Vegetative reproduction: Colonies are whitish to creamcolored and farinose to velvety. Hyphae may disarticulate. Truncate blastoconidia occur in acropetal chains. 1.2.2. Bullera (including Udeniomyces; teleomorph is Chlamydospore-like structures and yeastlike cells may Bulleromyces): be present. Septal pores are dolipores with cupulate Vegetative reproduction: Colonies are whitish, orange to parenthesomes. reddish-brown, and butyrous to mucoid. Yeast cells Physiology: Fermentation is absent. D-Glucuronate asare subglobose, ellipsoidal to elongate, and usually similation is not known; myo-inositol is assimilated, have polar budding. Hyphae and pseudohyphae may but nitrate is not assimilated. Production of starch-like compounds is not known. Diazonium blue B and urease be present. Ballistoconidia are rotationally symmetrical reactions are positive. Coenzyme Q-9 is formed. Xylose (in Bullera sensu stricto) or bilaterally symmetrical (in is present in whole-cell hydrolyzates. Udeniomyces). Septal pores, if present, are dolipores with cupulate parenthesomes (clamp connections are 1.2.6. Itersonilia: present in the dikaryophase of B. variabilis). Vegetative reproduction: Hyphal colonies are whitish, Physiology: Fermentation is absent. D-Glucuronate is hairy, velvety, arachnoid or velutinous. Hyphae have assimilated, and mjo-inositol and nitrate are sometimes clamp connections and chlamydospore-like ("sporogeassimilated. Starch-like compounds are sometimes nous") cells. Ballistoconidia are bilaterally symmetriproduced. Diazonium blue B and urease reactions cal. Yeast colonies are yellowish cream-colored and are positive. Coenzyme Q-10 is formed. Xylose is butyrous. Yeast cells are ellipsoidal to elongate, and present in whole-cell hydrolyzates. (Note: considerusually have polar budding. Hyphae and pseudohyphae able evidence suggests that Udeniomyces represents may be present. Septal pores are dolipores without a separate genus, distinct by bilaterally symmetrical parenthesomes. ballistoconidia, presence of collarettes and assimilation Physiology: Fermentation is absent. D-Glucuronate is of nitrate). assimilated, mj^o-inositol is sometimes assimilated, and nitrate is usually assimilated. Starch-like compounds 1.2.3. Cryptococcus (yeast stages of Tremellales are are not produced. Diazonium blue B and urease similar to Cryptococcus): reactions are positive. Coenzyme Q-9 is formed. Xylose Vegetative reproduction: Colonies are whitish, creamis present in whole-cell hydrolyzates. (/. perplexans colored, reddish, yellowish to brown, and usually may represent a cryptic teleomorph). mucoid. Yeast cells are globose to subglobose, ovoidal to elongate, and with polar or multilateral bud- 1.2.7. Kockovaella: ding. Hyphae and pseudohyphae may be present. Vegetative reproduction: Colonies are grayish-orange to yellow, and butyrous to mucoid. Yeast cells are globose Chlamydospore-like cells and clamp connections may to subglobose, ellipsoidal to kidney-shaped, and with be formed following conjugation. Septal pores, if budding on stalks with the septa at the distal end. present, are dolipores without parenthesomes. Ballistoconidia are bilaterally symmetrical. Hyphae and Physiology: Fermentation is absent. D-Glucuronate is pseudohyphae are absent. assimilated, mj^o-inositol is usually assimilated, and Physiology: Fermentation is absent. D-Glucuronate and nitrate is sometimes assimilated. Starch-like compounds mj^o-inositol are assimilated, but nitrate is not asare usually produced. Diazonium blue B and urease similated. Starch-like compounds are not produced. reactions are positive. Coenzyme Q-8, 9 or 10 are Diazonium blue B and urease reactions are positive. formed. Xylose is present in whole-cell hydrolyzates. Coenzyme Q-10 is formed. Xylose is present in wholecell hydrolyzates. 1.2.4. Fellomyces: nitrate are sometimes assimilated, but mj^o-inositol is not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 is formed. Xylose is absent in whole-cell hydrolyzates.

Vegetative production: Colonies are cream-colored and 1.2.8. Kurtzmanomyces: butyrous. Yeast cells are globose to subglobose to Vegetative reproduction: Colonies are pinkish and butyellipsoidal, with budding occurring on stalks with the rous. Yeast cells are globose to subglobose, ovoidal to septa at the distal ends. Hyphae and pseudohyphae may cylindrical, and with budding on stalks with the septa be present. Septal pore structure is not determined. at the distal end. Hyphae may be present. Septal pore Physiology: Fermentation is absent. D-Glucuronate and structure is not known. mjo-inositol are assimilated; nitrate is not assimilated. Physiology: Fermentation is absent. D-Glucuronate and Starch-like compounds are produced. Diazonium blue B mj^o-inositol are not assimilated; nitrate is assimilated. and urease reactions are positive. Coenzyme Q-10 is Starch-like compounds are not produced. Diazonium formed. Xylose is present in whole-cell hydrolyzates. blue B and urease reactions are positive. Coenzyme

75. Diagnostic descriptions and key to presently accepted heterobasidiomycetous

Q-10 is formed. Xylose is absent in whole-cell hydrolyzates. 1.2.9. Malassezia: Vegetative growth: Colonies are pale yellowish-brown and butyrous to rather dry. Yeast cells are globose to subglobose to ellipsoidal, and usually have monopolar budding, but occasionally sympodial proliferation occurs. Septal pores are absent or "micropore"-like. (Note: short hyphae can be present on skin.) Physiology: Fermentation is absent. D-Glucuronate, myoinositol, nitrate assimilation and production of starchlike compounds are not determined. Coenzyme Q-9 is formed. Xylose is absent in whole-cell hydrolyzates. 1.2.10. Moniliella: Vegetative growth: Colonies initially are cream-colored, but soon become grayish to olivaceous-black, and are smooth to velvety. Hyphae may disarticulate. Acropetal chains of truncate blastoconidia originate from short denticles. Thick-walled, clavate, aseptate setae, chlamydospores and pseudohyphae may be present. Yeast cells are ellipsoidal to subcylindrical. Septal pores are dolipores without parenthesomes. Physiology: Fermentation is present. D-Glucuronate assimilation is not known; mjo-inositol is not assimilated, but nitrate is assimilated. Production of starch-like compounds is not known. Coenzyme Q-9 is formed. Xylose is absent from whole-cell hydrolyzates. 1.2.11. Phaffia (teleomorph Xanthophyllomyces): Vegetative growth: Colonies are orange to salmon-red, and butyrous. Yeast cells are ellipsoidal. Pseudohyphae and chlamydospores may be present. Physiology: Fermentation is present. D-Glucuronate is assimilated, but mj^o-inositol and nitrate are not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates. 1.2.12. Pseudozyma (teleomorphs may belong to the Ustilaginales): Vegetative reproduction: Colonies are whitish, pinkish, orange or brown, and usually dimorphic. Hyphae are present and lack clamp connections. Acropetal chains of fusiform blastoconidia originate from lateral sterigmalike structures. Chlamydospores may be present. Yeast cells are ellipsoidal, ovoidal to cylindrical, and usually have polar budding. Pseudohyphae may be present. Septal pores, if present, are "micropore"-like structures. Physiology: Fermentation is absent. D-Glucuronate, myoinositol and nitrate are assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is absent in whole-cell hydrolyzates. 1.2.13. Reniforma: Vegetative reproduction: Colonies are white to creamcolored, and waxy or dry. Yeast cells are allantoidal and

genera / T. Boekhout

631

frequently occur in stacks. Hyphae and pseudohyphae are absent. Physiology: Fermentation is absent. D-Glucuronate assimilation is not known, and myo-mositol and nitrate are not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-7 is formed. Xylose is absent in wholecell hydrolyzates. 1.2.14. Rhodotorula (teleomorphs belong to Rhodosporidium): Vegetative reproduction: Colonies are orange, red, yellow or pale, and butyrous to mucoid. Yeast cells are globose to subglobose, ellipsoidal, ovoidal to elongate, and usually have polar budding. Hyphae and pseudohyphae may be present. Septal pore structure is not known. Physiology: Fermentation is absent. D-Glucuronate and nitrate are sometimes assimilated, but mj^o-inositol is usually not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 or 10 is formed. Xylose is absent in whole-cell hydrolyzates. 1.2.15. Sporobolomyces (including Ballistosporomyces; teleomorphs belong to Sporidiobolus): Vegetative reproduction: Colonies are pink, orange, red, yellowish or pale, and butyrous to mucoid. Yeast cells are globose to subglobose, ellipsoidal, fusoidal to cylindrical, and usually have polar budding, but multilateral budding may occur as well. Ballistoconidia are bilaterally symmetrical. Hyphae and pseudohyphae may be present. Septal pore structure is not known. Physiology: Fermentation is absent. D-Glucuronate and nitrate may or may not be assimilated, and mj^o-inositol is usually not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 or 10 (H2) are formed. Xylose is absent from whole-cell hydrolyzates. 1.2.16. Sterigmatomyces: Vegetative reproduction: Colonies are white or creamcolored and butyrous. Yeast cells are globose to subglobose to ovoidal, and with budding on stalks with the septum in the mid-region. Hyphae and pseudohyphae may be present. Septal pore structure is not known. Physiology: Fermentation is absent. D-Glucuronate and nitrate are variably assimilated, but myo-inosito\ is not assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 is formed. Xylose is absent from wholecell hydrolyzates. 1.2.17. Sympodiomycopsis: Vegetative reproduction: Colonies are cream-colored and butyrous to mucoid. Yeast cells are obclavate, obovoid to elongate, with holoblastic-annellidic or holoblasticsympodial budding. Blastoconidia are formed on short acropetal and sympodially branching chains, or are single. Chlamydospore-like structures may be present.

632

Via. Classification of the basidiomycetous

taxa

Hyphae and pseudohyphae are present. Septal pores are mj^o-inositol are usually assimilated, but nitrate usually "simple". is not assimilated. Starch-like compounds are somePhysiology: Fermentation is absent. D-Glucuronate assimtimes produced. Diazonium blue B and urease reactions ilation is not known, but myo-inositol and nitrate are are positive. Coenzyme Q-9 or 10 are formed. Xylose assimilated. Starch-like compounds are not produced. is present in whole-cell hydrolyzates. Diazonium blue B and urease reactions are positive, J ^ J Q . Jric^^5p(?r^/i^iW^5 (probably synonymous with Coenzyme Q-10 is formed. Trace amounts of xylose are Moniliella, G.S. de Hoog, personal communicapresent in whole-cell hydrolyzates. tion): 1.2.18. Tilletiopsis (teleomorphs may belong to the Vegetative reproduction: Colonies are cream-colored, Tilletiales): but soon become olivaceous-brown, and smooth or Vegetative reproduction: Colonies are white, creamcerebriform. Yeast cells, if present, are ellipsoidal colored, pink, yellow to brown, venose or velutinous, with sympodial proliferation. Hyphae may disarticulate, and tough to butyrous. Yeast cells, if present, are ellipBlastoconidia occur in acropetal chains. Pseudohyphae soidal to elongate, and have polar budding. Hyphae lack may be present. Septal pores are dolipores without clamp connections. Chlamydospores may be present. parenthesomes. Ballistoconidia are bilaterally symmetrical. Septal pores Physiology: Fermentation is present. D-Glucuronate asare "micropore"-like. similation is not known; myo-inositol is not assimilated, Physiology: Fermentation is absent. D-Glucuronate and but nitrate is assimilated. Production of starch-like mj^o-inositol are sometimes assimilated, but nitrate compounds is not known. Diazonium blue B and urease is not assimilated. Starch-like compounds are not reactions are positive. Coenzyme Q-9 is formed. Xylose produced. Diazonium blue B and urease reactions are is absent in whole-cell hydrolyzates. positive. Coenzyme Q-10 is formed. Xylose is absent 1.2.21. Tsuchivaea: in whole-cell hydrolyzates. Vegetative reproduction: Colonies are pale and butyrous. 1.2.19. Trichosporon: Yeast cells are globose to subglobose, ovoidal to Vegetative reproduction: Colonies are cream-colored, and cylindrical, with budding on stalks and with the septum moist to dry. Yeast cells, if present, are ellipsoidal to in the mid-region. elongate, with polar budding. Hyphae usually disarticu- Physiology: Fermentation is absent; D-Glucuronate and late into arthroconidia. Endospores and chlamydosporemjo-inositol are assimilated; nitrate is not assimilated, like cells may be present. Septal pores, if present, are Starch-like compounds are absent or weakly produced, dolipores with or without cupulate parenthesomes, but Diazonium blue B and urease reactions are positive, are "micropore"-like in T. pullulans. Coenzyme Q-9 is formed. Xylose is present in wholePhysiology: Fermentation is absent. D-Glucuronate and cell hydrolyzates. 2. Key to the heterobasidiomycetous genera with yeast states 1. 2(1).

3(2).

a b a b a b

4(2).

a b

5(4).

a

6(4). 7(6).

b a b a b

8(1). 9(8). 10(9).

a b a b a b

Basidiocarps present on natural substrates -^ 2 Basidiocarps absent on natural substrates —> 8 Basidiocarps synnema-like; basidia non-septate or transversely septate; septa "simple" —^ 3 Basidiocarps tuberculate to cerebriform or foliaceous and gelatinous; basidia longitudinally septate (tremelloid); septa with dolipores -^ 4 Basidia clavate, non-septate, with sessile terminal spores; basidiocarps waxy-arid or subgelatinous; D-glucuronate not assimilated; starch-like compounds produced Chionosphaera: Basidia cylindric, transversely septate, with basidiospores laterally budding off; basidiocarps capitate to clavate or stemonitoid; D-glucuronate assimilated; starch-like compounds not produced Agaricostilbum: Basidia catenulate; basidiospores passively released, sessile, fiisiform to narrowly clavate -^ 5 Basidia virtually all terminal, single (rarely catenulate); basidiospores actively released, sterigmate, usually globose to ovoidal or bullate -^ 6 Basidia developing from successive basal clamp connections of a first terminal basidium, maturing acropetally Fibulobasidium: Basidia developing from contiguous hyphal cells, maturing basipetally Sirobasidium: Basidiocarps erect, coralloid, occurring in dense aggregates, tough, gelatinous, simple or branched . . . . Holtermannia: Basidiocarps not erect, irregularly pulvinate to cerebriform or foliaceous, (but lacking in some parasitic forms) -^ 1 H-shaped conidia and/or yeast cells usually present; basidiocarps associated with Arthrinium on bamboo and other grasses Trimorphomyces: Conidia subglobose to subcylindric, never H-shaped; basidiocarps mainly on woody angiosperms or on fungi or lichens Tremella: Teliospores and/or basidia present -^ 9 Teliospores and/or basidia absent (anamorphic taxa) -^ 19 Teliospores present -^ 10 Teliospores absent -^ 15 Teliospores brown and echinulate; only hyphal vegetative cells Tilletiaria: Teliospores hyaline and smooth-walled; unicellular vegetative cells usually present —» 11

p. 643 p. 639

p. 710 p. 710 p. 711

p. 717 p. 712

p. 703

75. Diagnostic descriptions and key to presently accepted heterobasidiomycetous 11(10).

12(11).

13(11). 14(13). 15(9). 16(15). 17(16). 18(17). 19(8). 20(19). 21(20). 22(21). 23(22). 24(23). 25(21). 26(20). 27(26). 28(27).

29(27). 30(29).

31(30). 32(26). 33(32). 34(33). 35(34).

36(35).

633

genera / T. Boekhout

a Starch-like compounds produced; septa, if perforate, have dolipores without parenthesomes; coenzyme Q-8; xylose present in whole-cell hydrolyzates -^ 12 b Starch-like compounds not produced; septa, if perforate, with "simple" pores; coenzyme Q-9 or 10; xylose absent in whole-cell hydrolyzates -^ 13 a No fermentation; clamp connections sometimes present; maximum temperature of growth above 20°C; colonies orange, salmon, cinnamon or pale Cystofilobasidium: b Fermentation sometimes present; clamp connections absent; maximum temperature of growth below 20''C; colonies pale Mrakia: a Ballistoconidia present Sporidiobolus: b Ballistoconidia absent -^ 14 a Colonies orange or red Rhodosporidium: b Colonies not orange or red Leucosporidium: a Basidia tremelloid; rotationally symmetrical ballistoconidia present Bulleromyces: b Basidia 1-celled; ballistoconidia absent -^ 16 a Starch-like compounds produced; nitrate usually not assimilated; coenzyme Q-9 or 10 - ^ 1 7 b Starch-like compounds not produced; nitrate assimilated; coenzyme Q-10 (H2) Erythrobasidium: a Basidiospores in basipetal chains Filobasidiella: b Basidiospores not in basipetal chains ^18 a wj^o-Inositol assimilated Filobasidium: b wjo-Inositol not assimilated Xanthophyllomyces: a Cells strongly reniform and frequently in stacks Reniforma: b Cells not strongly reniform and not in stacks -^ 20 a Conidia (buds) on elongated stalks —> 21 b Conidia (buds) not on elongated stalks, but formation of conidia on short denticles may be present -^ 26 a wyo-Inositol assimilated; nitrate not assimilated; xylose present in whole-cell hydrolyzates -^ 22 b myo-lnos\to\ not assimilated; nitrate may be assimilated; xylose absent in whole-cell hydrolyzates -^ 25 a Ballistoconidia present Kockovaella: b Ballistoconidia absent -^ 23 a Dikaryotic chlamydospores and hyphae present Sterigmatosporidium: b Dikaryotic chlamydospores and hyphae absent -^ 24 a Septa at the end of the stalks; coenzyme Q-10 Fellomyces: b Septa in the mid-region of the stalks; coenzyme Q-9 Tsuchiyaea: a Septa at the end of the stalks; coenzyme Q-10 Kurtzmanomyces: b Septa in the mid-region of the stalks; coenzyme Q-9 Sterigmatomyces: a Ballistoconidia present -^ 27 b Ballistoconidia absent -^ 32 a Vegetative cells hyphal -^ 28 b Vegetative cells mainly unicellular -^ 29 a Clamp connections and dikaryotic chlamydospores ("sporogenous" cells) present; septal pores are dolipores without parenthesomes; coenzyme Q-9 Itersonilia: b Clamp connections and dikaryotic chlamydospores absent; septal pores, if present, not thickened; coenzyme Q-10 Tilletiopsis: a Ballistoconidia rotationally symmetrical Bullera: b Ballistoconidia bilaterally symmetrical ^30 a Ballistoconidia large (up to 18|im long and 10-14 ^im wide); conidia (buds) usually leaving collarettes; colonies not orange or red; D-glucuronate and nitrate usually both assimilated; xylose present in whole-cell hydrolyzates Udeniomyces (in this treatment incorporated in Bullera): b Ballistoconidia usually smaller; conidia not leaving collarettes or collarettes not distinct; colonies sometimes orange or red; if ballistoconidia are large and the colonies pale, either D-glucuronate or nitrate is assimilated; xylose absent in whole-cell hydrolyzates -^ 31 a Colonies not bright orange or red; coenzyme Q-9 Bensingtonia: b Colonies may be bright orange or red; coenzyme Q-10 or 10 (H2) Sporobolomyces: a Budding usually monopolar on a broad base (but occasionally also with sympodial proliferation) Malassezia: b Budding not monopolar on a broad base ^33 a Septate hyphae conspicuously present -^ 34 b Septate hyphae usually absent (some hyphal fragments may be present) ^38 a Arthroconidia dominant; usually no blastoconidia in acropetal chains Trichosporon: b Arthroconidia absent (although disarticulating hyphae may occur); acropetal chains of blastoconidia usually present -^ 35 a Fermentation present Moniliella: Trichosporonoides: b Fermentation absent ^36 a Blastoconidia with truncate ends; nitrate not assimilated; septal pore a dolipore with a cupulate parenthesome; coenzyme Q-9 Hyalodendron: b Blastoconidia without truncate ends; nitrate assimilated; septal pore, if present, "simple" or "micropore"-like; coenzyme Q-10 ^37

p. 646 p. 676 p. 693

p- 678 p- 670 p- 641 p- 654 p- 656 p- 663 p- 718 p- 798

p. 777 p. 700 p. p. p. p.

768 878 780 844

p. 775 p. 848 p. 731

p. 731

p. 723 p. 828 p. 782

p. 854 p. 785 p. 873

p. 773

634 37(36).

38(33). 39(38).

Via. Classification of the basidiomycetous taxa a Conidiogenesis usually in acropetal chains; septal pore, if present, a "micropore"-like structure; xylose absent in whole-cell hydrolyzates Pseudozyma: b Conidiogenesis usually with sympodial proliferation; septal pore "simple"; xylose present in trace amounts in whole-cell hydrolyzates Sympodiomycopsis: a Fermentation present Phaffia: b Fermentation absent -^39 a m^-o-Inositol usually assimilated; starch-like compounds usually produced; xylose present in whole-cell hydrolyzates Cryptococcus: b wyo-Inositol usually not assimilated; starch-like compounds not produced; xylose absent in whole-cell hydrolyzates Rhodotorula:

p. 790 p. 846 p. 789 p. 742 p. 800

Chapter 76

Keys to the genera and species of ballistoconidia-forming yeasts and yeastlike fungi T. Boekhout 1. Key to the genera of banistoconidia-forming yeasts and yeastlike fungi 1. 2(1). 3(1). 4(3). 5(4). 6(3). 7(6). 8(5). 9(7). 10(9). 11(10).

12( 11).

a Basidiocarps present on natural substrates —» 2 b Basidiocarps absent on natural substrates —> 3 a Basidia develop from successive basal clamp connections of a first terminal basidium and mature acropetally 710 Fibulobasidium: 710 b Basidia develop from contiguous hyphal cells and mature basipetally Sirobasidium: a Clamp connections present; hyphae usually dikaryotic -^ 4 b Clamp connections absent; hyphae and yeast cells usually monokaryotic -^ 6 , 693 a Teliospores present; colonies red, orange-red or pinkish-red; ballistoconidia bilaterally symmetrical . . . . Sporidiobolus: b Teliospores absent; colonies whitish; ballistoconidia bilaterally or rotationally symmetrical -^ 5 , 641 a Phragmobasidia present; haustorial branches present; ballistoconidia rotationally symmetrical Bulleromyces: b Phragmobasidia absent; haustorial branches absent; ballistoconidia bilaterally symmetrical Itersonilia: , 775 . 731 a Ballistoconidia rotationally symmetrical Bullera: b Ballistoconidia bilaterally symmetrical -^ 7 a Colonies mainly consist of narrow hyphae -^ 8 b Colonies mainly consist of yeast cells; monokaryotic hyphae sometimes present -^ 9 a Echinulate, brown teliospores present Tilletiaria: p. 703 b Echinulate, brown teliospores absent Tilletiopsis: p. 848 a Blastoconidia (buds) formed on long stalks Kockouaella: p. 777 b Blastoconidia (buds) sessile or on short denticles, only rarely on somewhat elongated stalks —^ 10 a Colonies red, orange, orange-red or pinkish-red Sporobolomyces: p. 828 b Colonies whitish, cream, brownish-yellow, ochraceous, brown or pale pink -^11 a Ballistoconidia large (up to 18|im long and 10-14 [xm wide); conidia (buds) usually leave distinct scars forming annellations or collarettes; D-glucuronate and nitrate usually assimilated; xylose present in whole-cell hydrolyzates Bullera (Udeniomyces): p. 731 b Ballistoconidia usually smaller; conidia (buds) usually do not leave collarettes or collarettes are not distinct; either D-glucuronate or nitrate may be assimilated; xylose absent in whole-cell hydrolyzates —^ 12 a Colonies may be bright orange or red; main ubiquinone CoQ-10 or 10(H2) Sporobolomyces (including Ballistosporomyces): p. 828 b Colonies not bright orange or red; main ubiquinone Q 9 Bensingtonia: p. 723

2. Key to the species with bilaterally symmetrical ballistoconidia 1.

a b 2(1). a b 3(2). a b 4(3). a b 5(4). a b 6(5). a b 7(6). a b 8(4). a b 9(3). a b 10(9). a b 11(10). a b

Nitrate assimilated -^ 2 Nitrate not assimilated -^ 28 Sucrose assimilated -^ 3 Sucrose not assimilated —» 24 Lactose assimilated —> 4 Lactose not assimilated -^ 9 Raflfinose assimilated -^ 5 Rafiinose not assimilated -^ 8 myo-lnosito\ assimilated mj'o-Inositol not assimilated -^ 6 Galactose assimilated Galactose not assimilated -^ 1 L-Sorbose assimilated L-Sorbose not assimilated Starch assimilated; salicin not assimilated Starch not assimilated; salicin assimilated Raflfinose assimilated -^ 10 Rafiinose not assimilated -^ 20 Maltose assimilated ^ 1 1 Maltose not assimilated -^ 18 Trehalose assimilated -^12 Trehalose not assimilated ^ 1 7 635

Bullera pyricola:

p. 737

Sporobolomyces xanthus:

p. 841

Bensingtonia miscanthi: Bensingtonia ingoldii: Sporobolomyces lactophilus: Sporobolomyces tsugae:

p. 726 p. 724 p. 834 p. 841

636 12(11). a b 13(12). a b 14(12). a b 15(14). a b 16(14). a b 17(11). a b 18(10). a b 19(18). a b 20(9). a b 21(20). a b 22(21). a b 23(22). a b 24(2). a b 25(24). a b 26(25). a b 27(25). a b 28(1). a b 29(28). a b 30(29). a b 31(30). a b 32(29). a b 33(32). a b 34(33). a b 35(28). a b 36(35). a b 37(36). a b 38(37). a b 39(38). a b 40(37). a b

Via. Classification of the basidiomycetous

taxa

2-Keto-D-gluconate assimilated -^ 13 2-Keto-D-gluconate not assimilated -^ 14 D-Xylose assimilation Bullera megalospora: D-Xylose not assimilated Bullera punicea: a-Methyl-D-glucoside assimilated -^ 15 a-Methyl-D-glucoside not assimilated -^ 16 Colonies salmon-pink or orange-pink; mol% G + C ca. 59-63 Sporobolomyces salmonicolor: Colonies reddish; mol% G + C ca. 50-56 Sporobolomyces roseus (compare with rare nitrate assimilating strains of S. shibatanus): Galactitol assimilated; teliospores, dikaryotic hyphae and clamp connections present Sporidiobolus ruineniae: Galactitol usually not assimilated; teliospores, dikaryotic hyphae and clamp connections absent . . Sporobolomyces roseus: Melibiose assimilated; colonies pale Bensingtonia naganoensis: Melibiose nor assimilated; colonies reddish Sporobolomyces roseus: L-Sorbose assimilated Sporobolomyces salmonicolor: L-Sorbose not assimilated - ^ 1 9 Cellobiose and D-xylose assimilated; ballistoconidia 12-18 |im long Sporobolomyces salicinus: Cellobiose and D-xylose not assimilated; ballistoconidia 6-11 |im long Sporobolomyces subbrunneus: mj^o-Inositol assimilated Sporobolomyces inositophilus: mjFo-Inositol not assimilated -^ 21 L-Sorbose assimilated -^ 22 L-Sorbose not assimilated Sporobolomyces griseoflavus: D-Arabinose, and usually L-arabinose assimilated -^ 23 D-Arabinose and L-arabinose not assimilated Bensingtonia phyllada: a-Methyl-D-glucoside assimilated; 2-keto-D-gluconate not assimilated Sporobolomyces salmonicolor: a-Methyl-D-glucoside not assimilated; 2-keto-D-gluconate assimilated Sporobolomyces fiyliicola: Maltose assimilated Sporobolomyces roseus: Maltose not assimilated -^ 25 Cellobiose assimilated -^ 26 Cellobiose not assimilated -^ 27 D-Xylose and D-glucosamine assimilated Sporobolomyces falcatus: D-Xylose and D-glucosamine not assimilated Bensingtonia yuccicola: D-Xylose and 2-keto-D-gluconate assimilated Sporobolomyces kluyueri-nielii: D-Xylose and 2-keto-D-gluconate not assimilated Bensingtonia ciliata: 2-Keto-D-gluconate assimilated -^ 29 2-Keto-D-gluconate not assimilated ^35 Galactose assimilated -^ 30 Galactose not assimilated - ^ 3 2 Raffinose assimilated; L-rhamnose not assimilated ^31 Raffinose not assimilated; L-rhamnose assimilated Sporobolomyces phyllomatis: Ethanol assimilated; growth at 37''C Sporobolomyces alborubescens: Ethanol not assimilated; growth absent at 37°C Sporobolomyces oryzicola: L-Sorbose and D-ribose assimilated Bensingtonia intermedia: L-Sorbose and D-ribose not assimilated -^ 33 Sucrose assimilated -^ 34 Sucrose not assimilated Sporobolomyces singularis: Maltose and trehalose assimilated Bensingtonia yamatoana: Maltose and trehalose not assimilated Sporobolomyces ruber: Sucrose assimilated -^ 36 Sucrose not assimilated Sporobolomyces gracilis: Melibiose assimilated Sporobolomyces ruber: Melibiose not assimilated - ^ 3 7 D-Arabinose assimilated ^38 D-Arabinose not assimilated -^ 40 a-Methyl-D-glucoside assimilated -^ 39 a-Methyl-D-glucoside not assimilated Sporobolomyces elongatus: Colonies salmon-pink or pinkish-orange; mol% G + C ca. 59-63 Sporobolomyces salmonicolor: Colonies reddish; mol% G + C ca. 50-56 Sporobolomyces shibatanus: Ethanol and glycerol assimilated; L-arabinose not assimilated Bensingtonia subrosea: Ethanol and glycerol not assimilated; L-arabinose assimilated Sporobolomyces sasicola:

p. 735 p. 739

p. 839 p. p. p. p. p. p.

836 696 836 726 836 839

p. 838 p. 840 p. 833

p. 832 p. p. p. p.

727 839 831 836

p. p. p. p.

831 729 834 724

p. p. p. p.

835 830 835 725

p. 839 p. 729 p. 837 p. 832 p. 837

p. p. p. p. p.

830 839 839 728 839

Part VIb

Descriptions of teleomorphic basidiomycetous genera and species Contents Agaricostilbum A. hyphaenes Bulleromyces B. albus Chionosphaera C. apobasidialis Cystofilobasidium C. bisporidii C. capitatum C. infirmominiatum C. lari-marini Erythrobasidium E. hasegawianum Filobasidiella F. neoformans Filobasidium F capsuligenum F elegans

639 639 641 641 643 644 646 646 648 650 652 654 654 656 656 663 664 665

F floriforme F globisporum F uniguttulatum Leucosporidium L. antarcticum L.fellii L. scottii Mrakia M frigida Rhodosporidium R. babjeuae R. dacryoideum R. diobovatum R.fluuiale R. kratochuilouae R. lusitaniae R. maluinellum R. paludigenum

666 667 667 670 671 671 673 676 676 678 679 680 682 683 684 685 686 687

R. sphaerocarpum R. toruloides Sporidiobolus S. johnsonii S. pararoseus S. ruineniae S. salmonicolor Sterigmatosporidium S. polymorphum Tilletiaria T. anomala Tremelloid genera with yeast phases. Sirobasidiaceae: Fibulobasidium, Sirobasidium; Tremellaceae: Bulleromyces, Holtermannia, Tremella, Trimorphomyces Xanthophyllomyces X. dendrorhous

688 690 693 694 694 696 697 700 700 703 703

705 718 718

This Page Intentionally Left Blank

77. Agaricostilbum

639

Wright / R.J. Bandoni and T. Boekhout

77. Agaricostilbum

Wright

R.J. Bandoni and T. Boekhout Diagnosis of the genus Basidia occur predominantly in synnemata-like basidiomata, (Fig. 292a, p. 616) but reduced basidiocarps may consist of only a few hyphal strands. The fertile hyphae usually terminate with four-celled basidia (Fig. 293, p. 617) and each basidial cell buds off sporidia. Many of the spores remain attached at any one time. Both the basidia and the basidiospores tend to become thick-walled, perhaps because of the exposed habitats occupied by these fungi. Little is known of the biology of these fungi. They typically occur on well-weathered palm material with numerous other fungi, but whether or not they are mycoparasites is unknown. The life cycle appears to be as follows: haploid yeast states conjugate and give rise to dikaryotic hyphae without clamp connections; these form synnemata on which the basidia occur; germination of the basidiospores result in the haploid yeast state. Conidial states are not known. Basidiomata of A. pulcherrimum and A. hyphaenes develop readily in culture. The yeast state of a single species is characterized here. Systematic discussion of the species 77.1. Agaricostilbum hyphaenes (Harrison & Patouillard) Oberwinkler & Bandoni (1982b) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal to fusoidal, occasionally somewhat cylindrical, (4.0-10.0) x (2.0-4.0) |im, and single. Budding is polar with enteroblastic proliferation and usually on a short denticle. Colonies are pale yellowishcream, smooth, shiny, butyrous, and with the margin entire. Growth on the surface of assimilation media (glucose): Growth is absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 5 days at 25°C, no hyphae or pseudohyphae are formed, but short filaments may occur. Aerobic growth is pale yellowish-cream, dull, butyrous, flat, smooth or somewhat warty, and with the margin entire. Cells are similar to those on malt extract agar, but frequently form short chains or aggregates. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

s +

-

+ + +

-

+ 1

-

s + + 1

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + + +

-

+ + + + s

-

+ +

-

n

-

Additional assimilation tests and o characteristics: + 2-Keto-D-gluconate 50% Glucose s Starch formation + Urease Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Growth at 25T Growth at 30°C

Origin of the strain studied: CBS 7811, from basidiomes growing on a palm spathe (Pheonix canariensis), collected by W. Schofield, Stanford, California, USA. Representative strain: CBS 7811. Comments on the genus The genus Agaricostilbum Wright was erected for a fungus first thought to be a synnematous hyphomycete (Wright 1970). The fungus, A. palmicolum Wright, was later found to be a gasteroid heterobasidiomycete (Wright et al. 1981), and was placed in the heterogeneous order, Atractiellales, by Oberwinkler and Bandoni (1982b) with A. hyphaenes (Harrison & Patouillard) Oberwinkler & Bandoni as the only other species. A. palmicolum, now known as A. pulcherrimum (Berkeley & Broome) Brady, Sutton & Samson, was assigned to a new order, Agaricostilbales, based on septal pore structure, discoidal spindle pole bodies (SPB), and morphological features of the basidia and basidiomata (Oberwinkler and Bauer 1989, Bauer et al. 1992). Although the basidia of Agaricostilbum are similar to those of Ustilago species, the genus Agaricostilbum does not appear to be closely related to any other heterobasidiomycetous groups on the basis of 5S ribosomal RNA sequence comparisons (Gottschalk 1985, Gottschalk and Blanz 1985). Bauer et al. (1992) found that the structure of the SPB was intermediate between those of the smuts and rusts. Species of Agaricostilbum are common on dead palm fronds and inflorescences. A. pulcherrimum has also been reported from a species of Xanthorrhoea. Representatives of the genus are among the commonest fungi occurring

640

VIb. Descriptions of teleomorphic basidiomycetous genera and species

on palm litter in warmer areas of Australia and parts of Asia (R. J. Bandoni, personal observation) and probable other regions where palms grow The species are of

seasonal occurrence, however, and therefore are not always present in spite of having rather tough, persistent basidiomata.

78. Bulleromyces Boekhout & A. Fonseca / T. Boekhout

641

78. Bulleromyces Boekhout & A. Fonseca T. Boekhout Diagnosis of the genus Yeast cells are ellipsoidal, subglobose or cylindroid, and monokaryotic. Budding is polar, with buds enteroblastic, sessile or on short denticles and with percurrent or sympodial proliferation. Ballistoconidia are rotationally symmetrical, subglobose. Colonies are cream, smooth, butyrous or mucoid. The teleomorphic state may be heterothallic or self-sporulating. Basidiocarps are absent. Dikaryotic hyphae are regularly branched, septate, with clamp connections and haustorial branches. Septal pores are dolipores with cupulate parenthesomes. Basidia are subglobose, clavate or ovoidal, and after karyogamy become longitudinally, obliquely or transversely and two to four-celled septate. Germination of basidia gives yeast cells or hyphae on which yeast cells or ballistospores originate. Fermentation is absent. D-glucuronate and mj^o-inositol are assimilated, but nitrate is not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates. The anamorph is assigned to Bullera. Type species Bulleromyces albus Boekhout & A. Fonseca Species accepted 1. Bulleromyces albus Boekhout & A. Fonseca Systematic discussion of the species 78.1. Bulleromyces albus Boekhout & A. Fonseca (Boekhout 1991a) Anamorph: Bullera alba (Hanna) Derx Synonyms: Sporobolomyces albus Hanna (Bisby et al. 1929) Bullera alba (Hanna) Derx (1930)

Growth of yeast cells on 5% malt extract agar: After 7 days at 1TC, cells are ellipsoidal, ovoidal or subglobose, (5.0-11.0)x(3.0-6.0)[im, and single. Budding is polar and buds are sessile or on short denticles. Cells sometimes form hyphal outgrowths of up to ca. 80 [xm long and 2.05.0 |im wide. Growth is mucoid, flat or slightly raised, smooth, dull or shiny, cream to brownish-cream, and with an entire margin. Growth on the surface of glucose assimilation medium: A thin film, islets, a ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, hyphae are sometimes formed, ca. 100 |im long and 2 . 0 ^ . 0 {Jim wide. Subglobose, somewhat thickwalled cells occur with the outer cell wall layer peeling off. Aerobic growth is cream, pale yellowish, or pale yellowish-brown, shiny, mucoid, smooth or slightly venose, flat, and the margin entire, straight or crenulate. Formation of ballistoconidia: Ballistoconidia that form on corn meal agar and malt extract agar are ellipsoidal to subglobose, and measure (4.0-9.5)x(3.57.0) [im (Fig. 310). Formation

of

dikaryophase:

Conjugation occurs

after mixing of strains of different mating types on corn meal agar at \TC or at room temperature. Selfsporulating strains also occur. Dikaryotic hyphae are made up of ceUs measuring (40-130)x(1.5-3.0) ^m, with clamp connections and haustorial branches. Basidia occur laterally and terminally on hyphae or hyphal branchlets, and measure (5.0-10.0)x(4.0-7.0) jJim, finally becoming 2-4 celled, because of longitudinal, transverse or oblique septation (Fig. 311). Basidia germinate by forming yeast cells or hyphae on which yeast cells or ballistospores are formed. Fermentation (17"C): absent.

Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ + + + + V

+ + + V

+ + + + + V

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

+ V V V

+ + + + + + + + + n

-

642

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Fig. 310. B. albus, CBS 501. Yeast phase. Ballistoconidia on corn meal agar. Bar= 10 ^im.

Additional assimilation tests and other characteristics:

growth

2-Keto-D-gluconate + Nitrite 50% Glucose Growth at 25T + Starch formation + Growth at 30*^0 v Urease + Growth at 37°C Co-Q: 10 (Nakase and Suzuki 1986a). Mol% G + C: 53.3-54.4, four strains, CBS 500, CBS 501, CBS 502, CBS 6302 {T^: Boekhout 1991a); 54.5 {T^: Nakase et al. 1990c); 54.4 {T^\ Nakase and Komagata 1971g).

be differentiated from related species by assimilation of inulin. In addition, the frequent assimilation of L-sorbose, D-glucosamine, and erythritol, and lack of growth with nitrite may be used to differentiate this species. Bandoni (1987) reported the occurrence of mating and formation of dikaryotic hyphae with clamp connections. Boekhout et al. (1991a) observed phragmobasidia of the Tremella-typQ after mating strains of Bullera alba. The septal pore is a dolipore with a cupulate parenthesome (Tremellales type), which supports the proposed relationship of Bullera with the Tremellales (Phaff 1970d, Boekhout et al. 1991a). Formation of dikaryotic hyphae and probasidium-like cells was also observed among strains of Bullera variabilis (Boekhout et al. 1991a, Boekhout 1991a). However, in this case no development of basidia was observed.

Origin of the strains studied: CBS 500, type of Sporobolomyces albus Hanna, straw of Hordeum jubatum infected by rust fungi, W.R Hanna, USA; CBS 501, air in dairy, B.W. Hammer, USA; CBS 502, air in dairy, B.W. Hammer, USA; CBS 6097, frass of Sinoxylon ruficorne, J.R van der Walt, South Africa; CBS 6302, grass, RF. Dupont, USA; CBS 7440, leaf of poplar (Populus sp.), A. Fonseca, Portugal; CBS 7441, leaf of poplar (Populus sp.), A. Fonseca, Portugal; CBS 7503, leaf of walnut (Juglans sp.), G. Gimenez, Portugal. Complementary mating types: CBS 500 (mt A), CBS 7441 (mt A), CBS 7503 (mt A), CBS 501 (mt B% CBS 6097 (mt B), CBS 6302 (mt B). Type strain: CBS 500x CBS 6302 (herbarium, CBS). Comments on the genus Lodder and Kreger-van Rij (1952) designated strain No 16, isolated by Hammer as neotype for Bullera alba. However, CBS 500, originally isolated by Hanna, and the type strain of Sporobolomyces albus, is the original type strain of Bullera alba. Bullera alba var. lactis was found to be conspecific with Bullera sinensis (Nakase et al. 1990c, Boekhout 1991a). As a consequence, no mating reactions occurred between this species and the monokaryophase of Bulleromyces albus. The monokaryophase ofB. albus (= Bullera alba) can

Fig. 311.5. albus, CBS 6302x7441. Dikaryophase. Hyphae and basidia on corn meal agar. Bar= 10 [xm.

79. Chionosphaera Cox / K.J. Kwon-Chung

643

79. Chionosphaera Cox K.J. Kwon-Chung Diagnosis of the genus Asexual reproduction is by polar budding of ellipsoidal to sausage-shaped single cells (Fig. 312A). Basidiocarps are white, minute, stipitate-capitate, and abundant (Fig. 312B). The stipes are composed of bundles of parallel, infrequently septate hyphae with no clamp connections (Fig. 312C, 313A1). Septal pores are simple. Basidial caps are often waxy, but sometimes cottony, globose to slightly flattened, without hyphidia or other sterile elements (Fig. 312B). Basidia are clavate, terminal, and produced mostly on unilaterally proliferating hyphal branches (Fig. 312C). Basidiospores are hyaline, oblong to ellipsoidal or reniform, one-celled, smooth (Fig. 312D), six to eight in number, and produced on short sterigmata in tight apical clusters (Fig. 313A3). After the basidiospores are released, the basidial apex is crown-like, due to the plugged short sterigmata (Fig. 313A4).

Fig. 312. C. apobasidialis. (A) Yeast cells grown on malt agar. Bar=10|im. (B) Mature basidiocarps on dead limbs of Carpinus. Bar = 0.3 mm (Cox 1976). (C) Young basidia produced terminally on septate hyphae. Bar= lOjxm. (D) Ovoidal to reniform basidiospores. Bar= 10 [im.

Fermentation is absent. D-glucuronate, mj^o-inositol and nitrate are not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Cell wall composition is not determined. Type species Chionosphaera apobasidialis Cox Species accepted 1. Chionosphaera apobasidialis Cox (1976)

644

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Systematic discussion of the species 79.1. Chionosphaera apobasidialis Cox (1976) Growth on yeast extract-2% malt agar: After 3 days at 25''C, the cells are ellipsoidal to sausage-shaped, (1.53)x(3-6)|im, and are single or in pairs (Fig. 312A). The colony is slightly mucoid and cream-colored. Dikaryotic mycelium is formed if the isolates are self-fertile. Growth on the surface of assimilation media (yeast nitrogen base plus glucose): No pellicles, but rings are formed. Morphology on corn meal agar: After 3 days at 25''C, the cells are ovoid, ellipsoidal to sausage-shaped, measuring (1.2-4)x(3-7)(im, and are single or in pairs. A limited amount of pseudohyphae is produced in old cultures. Life cycle: Yeast cells of the two opposite mating types fuse by a conjugation tube, and the contents of one of the fused cells flows into the other cell via the conjugation tube. Dikaryotic hyphae without clamp connections arise from the second cell and eventually produce white, erect, capitate fascicles. The fascicles are composed of compact, predominantly parallel, infrequently branched, and infrequently septate hyphae which form synnemata (Fig. 313B). The synnemata are terminated with a globose sporocarp (0.25-0.75 mm) covered with a hymenium (Fig. 313C). The hymenium is composed of frequentlybranched hyphae bearing terminal basidia (Fig. 312C). Basidia, ( 2 0 ^ 9 x 3-5) [im, are evenly or undulately clavate, bearing six to eight thick-walled basidiospores apically on short denticles (sterigmata). The sterigmata collapse after the spores are detached. Basidiospores, ( 3 . 5 - 5 x 7 -

10)|im, are hyaline, smooth, ellipsoidal to ovoidal, or reniform. Basidiospores germinate to produce uninucleate yeast cells. Two isolates, CBS 7430 and CBS 7431, were both selffertile and produced basidiocarps when the yeast cells were initially grown on yeast extract-malt (2%) agar for the formation of dikaryotic mycelium followed by transfer of the mycelial blocks onto water agar. Single basidiospores isolated from CBS 7430 produced two kinds of isolates: self-fertile and self-sterile. Crossing of selfsterile isolates in all possible combinations revealed that they belong to two different mating types. It appears, therefore, that C apobasidialis has bipolar heterothallism, as Cox (1976) has suggested. The isolates lose the ability to form basidiocarps when they are maintained on agar media. The species descriptions of C. apobasidialis by Cox (1976), and subsequently by Oberwinkler and Bandoni (1982b), are based on the basidiocarps produced in its natural habitat, the bark of Quercus and Carpinus trees. The basidiocarps, (0.5-3 mm high), produced on the tree bark resemble minute mushrooms with white, globose to depressed globose caps, often waxy, and with short stipes (Fig. 312B). Such well-developed basidiocarps have been rarely observed in pure culture on agar media. Cox (1976) has reported that, in the presence of dematiaceous hyphomycetes such as Cladosporium or Chloridium, fasciculate, globose basidiocarps are produced by C apobasidialis on agar medium. Most of the basidiocarps produced in pure culture were loosely fasciculated, bearing a scanty hymenium at their tips. Fermentation: absent.

Fig. 313. C. apobasidialis. (Al) Dikaryotic hyphae and early stages of basidium formation. (A2) Diploidization in young basidium. (A3) Basidia with basidiospores. (A4) Basidium after release of basidiospores. (A5) Germinating basidiospores. (B) Synnemata. Bar= 10 ^im. (C) Young basidiocarp (Cox 1976). Bar=80(im.

79. Chionosphaera Cox / K.J. Kwon-Chung

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Growth at 25°C + Starch formation + Growth at 30''C w/Urease w/Co-Q: 10 (Y. Yamada, personal communication). Moiy© G + C: 51.6 (HPLC: RA. Blanz, personal communication).

Origin of the strains studied: CBS 7430 (NRRL Y17229) and CBS 7431 (NRRL Y-17230) isolated by Clark T. Rogerson from twigs of Carpinus caroliniana. Other strains of C apobasidialis have been isolated from deciduous trees such as Quercus macrocarpa, Q. stellata, and Carpinus caroliniana (Oberwinkler and Bandoni 1982b, Cox 1976). Type strain: CBS 7430, a self-fertile strain received from Clark Rogerson, was collected in Chester County, Pennsylvania, USA. Comments on the genus The genus Chionosphaera was described by Cox (1976)

645

to accommodate a yeast which produces minute, stipitatecapitate basidiocarps resembling those of the homobasidiomycetes. The genus Chionosphaera is monotypic. In spite of the presence of basidiocarps. Cox classified C. apobasidialis in the family Filobasidiaceae because the basidia are long, nonseptate, and produce apical basidiospores in a flower-like arrangement, characteristics shared by members of the Filobasidiaceae. Cox's isolates were not preserved for further study, and the description of C. apobasidialis appearing in the previous edition of this book was based solely on Cox's report. He also proposed to classify Filobasidiaceae in the order Aphyllophorales of the Homobasidiomycetes on the basis that the family produces holobasidia. In 1982, Oberwinkler and Bandoni made a critical study on newly isolated cultures of C. apobasidialis (isolated by C. Rogerson) and the herbarium specimen on Quercus stellata (collected by Cox). They concluded that C apobasidialis does not fit into the family Filobasidiaceae, and transferred it into the newly described family, Chionosphaeriaceae. Unlike members of the Filobasidiaceae, C. apobasidialis produces basidiocarps, and basidiospores are formed on the sterigmata. The hyphal septa in C apobasidialis are simple and resemble those of rust fungi (Oberwinkler and Bandoni 1982b). Hyphal septa of the Filobasidiaceae have primitive to well-developed dolipores without parenthesomes (Kwon-Chung and Popkin 1976, Moore and Kreger-van Rij 1972, Oberwinkler et al. 1983). Physiologically, C. apobasidialis differs from the members of the Filobasidiaceae by not being able to assimilate inositol or to produce a strong urease reaction. Nucleotide sequence analysis of the 5' portion of LSU rDNA (J. Fell, personal communication) demonstrated that C. apobasidialis is a Uredinomycete and possibly a member of the Agaricostilbales.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

646

80. Cystofilobasidium Oberwinkler & Bandoni K.J. Kwon-Chung Diagnosis of the genus Species of the genus Cystofilobasidium except C lari-marini, produce bright orange, pinkish-salmon to cinnamoncolored colonies due to the presence of carotenoid pigments. Asexual reproduction is by polar budding of haploid or diploid, ovoidal to elongated cells. Ballistoconidia are not formed. Rudimentary pseudohyphae may be produced in some species. True mycelium with or without clamp connection is produced during sexual reproduction. Mycelial septa have dolipores without parenthesomes. In the teleomorphic state, intercalary, globose, thick-walled dark pigmented probasidia (teliospores) are produced on the mycelium. Probasidia germinate to form slender, tubular or short, pyriform holometabasidia with non-deciduous terminal, and sessile basidiospores. Species may be homothallic or heterothallic. Fermentation may be present. D-Glucuronate, mjo-inositol and nitrate are sometimes assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 or 10 is formed. Xylose is present in whole-cell hydrolyzates. Type species Cystofilobasidium capitatum (Fell, I.L. Hunter & Tallman) Oberwinkler & Bandoni Species accepted 1. Cystofilobasidium 2. Cystofilobasidium 3. Cystofilobasidium 4. Cystofilobasidium

bisporidii (Fell, I.L. Hunter & Tallman) Oberwinkler & Bandoni (1983) capitatum (Fell, I.L. Hunter & Tallman) Oberwinkler & Bandoni (1983) infirmominiatum (Fell, I.L. Hunter & Tallman) Hamamoto, Sugiyama & Komagata (1988) lari-marini (Saez & TL. Nguyen) Fell & Statzell-Tallman (1992)

Key to species See Table 67. 1. 2(1). 3(2).

a b a b. a b

Colony white Colony pinkish-salmon, or bright orange to cinnamon-colored -^ 2 Metabasidium short and pyriform Metabasidium tubular and slender with a terminal swelling -^ 3 Melibiose assimilated Melibiose not assimilated

C. lari-marini:

p. 652

C. infirmominiatum:

p. 650

C. bisporidii: C. capitatum:

p. 646 p. 648

Table 67 Key characteristics of species in the genus Cystofilobasidium Species

Colony color

Cystofilobasidium bisporidii C capitatum C. infirmominiatum C. lari-marini

Glucose fermentation

Assimilation^ Me

Orange, pink Orange, pink, cinnamon Orange, pink White

Mz

I

LS

+ + + +

+ + +

Shape of metabasidia

Sexuality

Tubular with terminal swelling Tubular with terminal swelling Pyriform Tubular with terminal swelling

Heterothallic Homothallic(?) Heterothallic Homothallic

Abbreviations: Me, melibiose; Mz, melezitose; I, inositol; LS, L-sorbose.

Systematic discussion of the species 80.1. Cystofilobasidium bisporidii (Fell, I.L. Hunter & Tallman) Oberwinkler & Bandoni (Oberwinkler et al. 1983) Synonym: Rhodosporidium

bisporidii Fell, I.L. Hunter & Tallman (1973)

Growth in 2% malt extract broth: Haploid cells grown for 3 days at \2'C are subglobose to elongate, (3-5) x (5-11) jim, and usually single or in pairs.

Reproduction is by polar budding, and there is a light sediment. A light pellicle and a moderate sediment are present after one month. Growth on 2% malt agar: After 3 days at 12°C, the colony is orangish-pink, smooth, glistening, and the margin is entire. The yeast cell morphology is subglobose to elongate resembling in size those cells grown in malt broth (Fig. 314A). After one month, the color is the same as at 3 days and the colony is mucoid and slightly runny.

80. Cystofilobasidium Oberwinkler & Bandoni / K.J. Kwon-Chung

Fig. 314. C. bisporidii. (A) Yeast cells grown on 2% malt extract agar. Bar=10|im. (B) Basidium with paired primary sporidia. Bar = 5^m. (Fell et al. 1973). (C) Germ tube formation from the primary sporidia. Bar = 4^im. (Fell et al. 1973).

At 24°C, the cell morphology is the same as at 12°C, except that brown areas containing globose (5-11 ^im in diameter) to subglobose (7-9.5) x (8-10) |im, thick-walled, granulated cells develop within one month of growth. The granulated cells differ from teliospores by thinner walls. Dalmau plate cultures on corn meal agar: After incubation for 2 weeks at 12°C or at 24°C, a true mycelium or typical pseudomycelium is absent. Occasional rudimentary pseudohyphae or short chains of cells may be present. Life cycle (Fig. 315): The yeast cells (48 h stock culture) of the two compatible mating types (AlBlxA2B2 MATING T Y P E S

>

647

or A2BlxAlB2) conjugate within 4 days when they are mixed on corn meal agar at 12°C. The results are not always dependable, and the procedure may have to be repeated before the mating reaction can be observed. Dikaryotic hyphae with hook-to-peg clamp connections develop from conjugated cells within 4 days. Conidia are absent on the mycelium. The teliospores are globose (9-ll|im in diameter) to subglobose (6-9)x(7-ll)|im, uninucleate, granulated, intercalary, and are produced singly or, infrequently, in pairs. The hook-to-peg clamp connections are present between the teliospores and the mycelium. The teliospores increase in size to (812)x(9-114)jim after one month. Teliospores germinate at 12-24°C when 2-3-week-old cultures are soaked in distilled water for 8 to 10 weeks and then transferred onto 2% water agar plates. After 3 days on 2% water agar, the teliospores produce a long metabasidium, ( 1 2)x(19-140)[im, with 0 to 3 septa and a 2-4|imwide terminal swelling. Subglobose to ovoidal ( 3 ^ ) x ( 4 8)^m primary sporidia (up to 10 in number) develop at or near the terminal swelling; they are attached to the apex of the basidium either individually or in pairs (Fig. 314B). For some metabasidia, primary sporidia may be found along the sides of the basidia. One to several basidiospores are produced from the primary sporidia which remain attached to the metabasidium throughout the basidiospore development. Basidiospores detach from the primary sporidia and reproduce by polar budding to form yeast colonies of four different mating types. Some primary sporidia may produce germ-tubes rather than basidiospores (Fig. 314C). In rare cases, the metabasidium may be branched and septate with two "basidial heads."

CONJUGATION AND LIMITED H Y P H A L GROWTH

BASIDIOSPORES HAPLOID BUDDING CONJUGATION

DIKARYOTIC MYCELIUM

PRIMARY

BASIDIOSPORES

ENDOSPORES IN METABASIDIUM ENDOSPORES IN MYCELIUM

GERMINATION AND MEIOSIS

TELIOSPORE FORMATION AND KARYOGAMY

Fig. 315. Life cycle of C. bisporidii (Fell and StatzellTallman 1984).

648

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Metabasidia occasionally develop directly from thickwalled hyphae in the absence of a teliospore. This indicates that karyogamy can occur in the hyphae and in the teliospore. Endospores (1-6 in number) may be present in the metabasidium or in the mycelium. Fermentation: absent.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + +

-

+ + +

-

+ + +

-

+/w +

-

A/'-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ V

V V

+ +

-

V

+ +/w

-

+ V

+

-

Additional assimilation tests and other g;rowf characteristics: D-Saccharate Thiamine-free Splitting of arbutin + Biotin-free 50% Glucose (w/w)Growth at 24°C + yeast extract agar Growth at 30°C Starch formation Urease

+

Co-Q: 8 (Yamada and Matsumoto 1988a). Mol% G + C: 60.9 (7;„: Oberwinkler et al. 1983); 64.1 (HPLC: Hamamoto et al. 1986b).

Origins of the strains studied: Marine sources of the Southern Indian and Pacific Oceans (9) (Fell et al. 1973). Complementary mating types: CBS 6346 (AlBl) and CBS 6347 (A2B2). Type strain: CBS 6346. Allotype strains: CBS 6348 {A1B2) and CBS 6349 (A2B1). Comments: Cystofilobasidium bisporidii is the only known species in the family Filobasidiaceae that has a tetrapolar mating system. Only two mating types, AlBl and A2B2, have been isolated from marine sources, but single-basidiospore cultures of A2B1 SindAlB2 have been obtained from a parental cross (Fell et al. 1973). Mixes ofAlBlxAlB2 or A2B2xA2Bl resuk in conjugation and deformed hyphae but no clamp connections or teliospores. Mixes of AlB2xA2B2 or A2BlxAlBl, however, fail to show any indication of mating reactions (Fell et al. 1973). Metabasidia of C bisporidii resemble more closely those of C. capitatum than any other Cystofilobasidium species. C. bisporidii, however, produces metabasidia with considerably smaller apices than C. capitatum.

80.2. Cystofilobasidium capitatum (Fell, I.L. Hunter & Tallman) Oberwinkler & Bandoni (Oberwinkler et al. 1983) Synonym: Rhodosporidium

capitatum Fell, I.L. Hunter & Tallman (1973)

Growth in 2 % malt extract broth: After 3 days at 12''C, the cells are subglobose to ovoidal or elongate, (l-5)x(2-14)jim, and with or without polar buds. The sediment is light; a ring or pellicle is absent. At one month, a moderate sediment and light film-like ring are present, but without pellicle. Yeast cells grown at 24°C resemble those grown at 12°C, but occasional mycelium and immature teliospores are seen at 24°C. After one month at 24°C, heavy sediment and mycelial clumps are present; a ring may be absent or present, and a pellicle is not produced. Growth on 2 % malt agar: Colonies grown on mah extract agar at 12''C for 3 days are mucoid and light salmon-orange, pinkish, or orange-cinnamon in color. The morphology of cells is similar to that of those grown in mah extract broth (Fig. 316A). At one week, septate true mycelium with terminal, lateral or intercalary teliospores is produced sparsely or abundantly. Conidia are absent on the mycelium. After one month, the colony is deeper in color and usually very mucoid and smooth, although some strains may be convoluted. The colony margin is entire, with areas of dense radiating mycelium. The teliospores are brown, thick-walled, globose ( 6 20(im in diameter) to subglobose (5.9-6.5)x(17.418.8) |im, and are produced single, double (Fig. 316B), and in multiples up to 12 or more. After one month, there is some increase in number and size of the teliospores. At 24''C, colonies are of various shades of cinnamon, light to dark pink, orange, or vinaceous-cinnamon with dark brown sections of teliospores. Colony texture may be rugose and dry to smooth, semi-glistening, or glistening with areas of dense mycelium at the margin. The shapes of

*

^,

*

f Ik

Fig. 316. C capitatum. (A) Yeast cells grown on malt agar. Bar= 10 |im. (B) A pair of teliospores. Bar = 5 |im. (C) Metabasidia with basidiospores developed from a teliospore. Bar = 4fxm. (Fell et al. 1973).

80. Cystofilobasidium Oberwinkler & Bandoni / K.J. Kwon-Chung

649

UNINUCLEATE MYCELIUM FORMATION

BASIDIOSPORES

PRIMARY BASIDIOSPORES

ENDOSPORES

ENDOSPORES IN \ MYCELIUM^

TELIOSPORE FORMATION GERMINATION

cells in three-day-old culture varies from ovoidal, subglobose, reniform, dumbbell, elongate, and branched with the size range of 1.3 x 4.7 [im to 3.4 x 16 |im. Formation of globose (6 to 8 |im in diameter) to subglobose (5.9x6.5 jim to 17.4x18.8 Jim) teliospores become evident at one week, but the size of the teliospores is smaller than those at 12°C. The teliospores are produced on a short mycelium developed from the yeast cells and then multiply by yeastlike budding to form a large group of teliospores. Newly formed teliospores may remain attached to the parent spore and continue to replicate. After one month, colonies become darker in color, ranging from fleshocher to ochreous-buff or cinnamon-buff Teliospores are larger in size, measuring 6.7 to 13.4 |im or 6.7xl0|im to 14.1xl4.7(im. Endospores are absent in the cultures grown at 24"C. Dalmau plate culture on corn meal agar: Extensive true mycelium with brown-walled teliospores are produced after incubation for 7 days at 12°C and 24''C. Teliospores are globose (4.7 to 15.4 |im in diameter) to ovoidal (5.4x 10.8 |im to 6.7x 13.4[im) and are produced single, double, or in groups of 12 or more intercalary, terminally, or laterally on mycelium. Young developing teliospores (up to 7.4 x 10.1 |im), lacking heavy cell walls and the large globuloid inclusions of the developed spores, are also present. Conidia are lacking. After one month, the teliospores show a slight increase in size. Basal projections (2.2-2.7 x 1.1 [im) that attach to the mycelium have been seen in some teliospores. Endospores, usually fewer than 6 per mycelial cell, are numerous in onemonth-old culture, but rare in 7-day-old culture. Life cycle (Fig. 317): Single yeast cells produce uninucleate hyphae and teliospores without mating.

Fig. 317. Life cycle of C capitatum (Fell and Statzell-Tallman 1984).

Clamp connections are absent, but dolipore septa without parenthesomes are present (Oberwinkler et al. 1983). Teliospores do not germinate unless they are first soaked in water for a prolonged time. To germinate teliospores obtained from 3-week-old malt agar culture, the spores are soaked in distilled water for 11 weeks and then transferred onto water agar at 12°C. Germination can be observed after incubation for 3 days. The metabasidium (Fig. 316C), which is rarely septate, is tubular (8-80 jjimx 1.4-2.7 [im), with an apical swelling, and forms a capitate terminus (4.9-7.7 |im wide). Primary sporidia ranging from 2 to 10 in number develop on the capitate terminus. Primary sporidia are single or in pairs, subglobose (4.0x4.7 [im to 6.0x7.4!im) with one to two basidiospores, or they may produce septate hyphae (germ tubes). In addition to these teliospores, there are considerably smaller teliospores (2.7x4.0 jim-5.4x6.7 [im) which germinate to produce short (6.0-17.4 |im) basidia with rarely more than two primary sporidia. After development of basidiospores or germ tubes, primary sporidia degenerate and remain attached to the basidium. Endospores may be formed within the degenerated teliospores and basidium after the completion of basidiospore formation. A metabasidium with primary sporidia may also arise directly from mycelium, which becomes thick-walled. Such a metabasidium is different from those developed from teliospores by lacking a terminal swelling. Although cytological studies have not clearly determined whether C capitatum is homothallic or the fruiting body is a result of asexual development, all the basidiospore progeny tested were self-fertile. Evidence of genetic recombination was present among the progeny obtained by micromanipulation. Some progeny

VIb. Descriptions of teleomorphic basidiomycetous genera and species

650

were morphologically distinct from the parent culture and produced rugose, dry colonies composed mainly of teliospores, while others were yeastlike in varying degrees. The rugose, dry isolates produced yeast cells only after several weeks in culture. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + +/w

-

+ + V V

+ V

+ V V

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

likely that recombination and segregation of the factors controlling colonial morphology had occurred during basidiospore formation. Although conclusive evidence has not been obtained, C. capitatum may be naturally diploid and homothallic. A question remains as to when and where the reduction division and subsequent diploidization occur in the life cycle. C capitatum was originally isolated from marine sources, but it also occurs on the gleba of mushrooms such as Mutinus caninus and Phallus impudicus (Oberwinkler et al. 1983).

+

-

+ + +

-

+ + +/w

-

+

-

+

Additional assimilation tests and other %;rowth characteristics: D-Saccharate Thiamine-free Splitting of arbutin Biotin-free Growth at 2 4 ^ 50% Glucose (w/w)+ yeast extract agar Growth at 3 0 T -

Starch formation + Urease + Co-Q: 8 (Sugiyama et al. 1985). Mol% G + C: 56.6 {T^ : Oberwinkler et al. 1983); 59.2 (HPLC: Hamamoto et al. (1986b).

Origins of the strains studied: Marine sources of the Southern Indian Ocean (13) (Fell 1976) and South Florida (1) (Ahearn and Roth 1966). Type strain: CBS 6358, isolated from a zooplankton sample in the Southern Indian Ocean. Comments: The cytology and genetics of C capitatum are extremely difficult to study because the germination of teliospores not only requires a long time and unusual measures (such as soaking in distilled water), but also the rate of germination is low. Oberwinkler et al. (1983) reported that the teliospores can be stimulated to germinate by heating the culture to about 55°C. The details on the growth medium or the length of heating time have not been discussed. Since the hyphae and teliospores develop directly from a single uninucleate yeast cell, the hyphae are uninucleate with no clamp connections. There is no evidence of nuclear fusion during teliospore formation, and singlebasidiospore cultures are self-fertile. Fell et al. (1973) described C capitatum as "self-sporulating" instead of homothallic (Fell and Statzell-Tallman 1984). Because the single-basidiospore cultures vary in morphology and some of them are different from the parent culture, it is

80.3. Cystofilobasidium infirmominiatum (Fell, I.L. Hunter & Tallman) Hamamoto, Sugiyama & Komagata (1988b) Anamorph: Cryptococcus infirmo-miniatus (Okunuki) Phaff & Fell Synonyms: Rhodosporidium infirmo-miniatus Fell, I.L. Hunter & Tallman (1973) Torula infirmo-miniata Okunuki (1931) Rhodotorula glutinis (Fresenius) F.H. Harrison var. infirmo-miniata (Okunuki) Lodder (1934) Rhodotorula infirmo-miniata (Okunuki) Hasegawa & Banno (1964) Cryptococcus infirmo-miniatus (Okunuki) Phaff & Fell (1970) Rhodotorula sinensis M.-H. Lee (1974)

Growth in 2 % malt extract broth: After 3 days at 12''C, the cells are subglobose (2.0x3.4)-(4.7x8.7)jim or elongate (1.3x4.0)-(4.7xl0)(im, and single or in short chains. Sediment is light, and a ring or pellicle is absent. After one month, a fragile film and ring have formed. Growth on 2 % malt extract agar: After 3 days at 12°C, the colony is grenadine-pink in color, smooth, glistening, and slightly raised. The border is entire without mycelium. The cells are subglobose to elongate (2.0x3.4)-(4.7x8.7)[im. After one month, the colony tends to be mucoid and runny. Some strains are dull, dry, and their margin is lighter in color. The cells are oval to elongate (1-5.5)x(2.5-12) (im or subglobose ( 2 5.5)X(3-7.5) (im (Fig. 318A). There are globose (4-8 |im in diameter) to subglobose (2-6)x(3-7.5)|im granulated cells with thicker walls than the typical yeast cells. Dalmau plate culture on corn meal agar: Growth under the coverglass shows abundant yeast cells but no mycelium or pseudomycelium is present at 12''C.

-1.^^!:

:••>[• f

^":f>-^j|/5

Fig. 318. C. infirmoniniatum. (A) Yeast cells grown on malt agar. Bar=10(im. (B) Basidium with three basidiospores. Bar = 5^im. (Fell et al. 1973).

80. Cystofilobasidium Oberwinkler & Bandoni /K.J. Kwon-Chung MATING TYPES . A/, A2, A3

651

_> CONJUGATION A/ X A2 A2 XA3 A3 X Af

&Q (#) /I

BASIDIOSPORES \

DIKARYOTIC MYCELIUM FORMATION

HOLOMETABASIDIUM

ENDOSPORES IN MYCELIUM

GERMINATION AND MEIOSIS TELIOSPORE FORMATION AND KARYOGAMY

Fig. 319. Life cycle of C. infirmominiatum (Fell and Statzell-Tallman 1984).

Life cycle (Fig. 319): C infirmominiatum is a heterothallic species with a one-locus, multiple-allele system. The mating types known are Al, A2, and A3, and crosses of AlxA2 or AlxAS produce the same result as the cross of A2xA3. Upon mixture of two compatible strains on corn meal agar, conjugation occurs within 36 hours and mycelial formation becomes evident after 3 days. After one week, mycelium and teliospores are abundant, although there is some strain variation in their rate of formation and degree of abundance. Clamp connections are of the hook-to-peg type, and they are infrequently found. Conidia are rarely produced on the hyphae. Teliospores are found in two morphological forms: the first type is globose (6.5-8 (im in diameter) to subglobose ( 5 - 9 ) x ( 7 - l l ) | i m with numerous granular bodies and is terminal or intercalary and single or double. Teliospores are slightly larger (6.5-10)x(7-ll)[im after one month. The second type of teliospore is brown, thickwalled, ovoidal (9-ll)x(14-15)jim or subglobose (7.517)x(8-18.5)[im with a large globular inclusion and is produced in groups of up to 12. Germination of the teliospores can be achieved as follows: the teliospores are harvested from dikaryotic cultures grown on corn meal agar for 17 days and soaked in distilled water for 20 weeks before transferring to 2% water agar. The teliospores germinate after 3 days on 2% agar. The morphology of metabasidia is variable and, most commonly, they are pyriform with a large base attached to the teliospore (Fig. 318B). The base of the metabasidia is subglobose (5-7) x (7-9) jim or, occasionally, ovoidal-elongate (3.5-8 |im), and the apex

is globose (1.5-3.5 jim) to subglobose ( 2 ^ ) x ( 2 . 5 - 5 ) |im. In some metabasidia, the apex is two-celled, with the terminal cells as large as, or slightly larger than, the basal cell. Sporidia are 1-4 in number and develop terminally on the metabasidium. Lateral sporidia may be found only rarely. Endospores, in numbers of up to 10, may develop within the mycelium. Conjugation does not occur when any of the mating types are mixed with the other species of Cystofilobasidium.

Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + V

-

+ +

-

+ + + + V V V

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V V

V

+ + +

-

V

+ w

-

+

-

+

-

VIb. Descriptions of teleomorphic basidiomycetous genera and species

652

Additional assimilation tests and other growth characteristics: D-Saccharate Splitting of arbutin 50% Glucose (w/w)yeast extract agar Starch formation Urease

-

+

-

Thiamine-free Biotin-free Growth at 30°C Growth at 33°C

mi. -^Mt

+/w

yi-

+ +

Co-Q: 8 (Yamada and Kondo 1973). Mol% G + C: 66.3 (HPLC: Hamamoto et al. 1988b).

Origins of the strains studied: Marine waters of the Antarctic, Southern Indian, and Southern Pacific Oceans (14); human source (1) (Fell et al. 1973); air in Tokyo (1) (Okunuki 1931); diseased pears in China as Rhodotorula sinensis (1) (Lee 1974). Complementary mating types: CBS 6350 (mating type A2) and CBS 6352 (mating type A3), both fi-om marine sources. Type strain: CBS 323 (mating type ^7), the type strain of Torula infirmominiata. Comments: C infirmominiatum is the only known species in the family Filobasidiaceae that produces pyriform metabasidia. It is unique in two other ways: it is the only known species in the family that has a unifactorial incompatibility system with three alleles, and it is the only known species in the genus Cystofilobasidium that lacks primary sporidia. In addition to marine water, C infirmominiatum has been isolated from frozen vegetables, raw meat, air, diseased pears, and fecal samples of a man with symptoms of tropical sprue. There is no evidence that the yeast is pathogenic for humans. 80.4. Cystofilobasidium lari-marini (Saez & T.L. Nguyen) Fell & Statzell-Tallman (1992) Synonym: Leucosporidium lari-marini Saez & T.L. Nguyen (1989)

Growth in 2 % malt extract broth: Moderate growth with ring and fragile pellicles after one month. Growth on 2 % malt extract agar: After 3 days at 12''C, the cells are ellipsoid or ovoid, (2-5)x(5-12)|im, and single or in pairs (Fig. 320A). Reproduction is by polar budding. Growth in 2 % glucose-peptone agar (Sabouraud agar): Colonies are white, and semi-glossy. Submerged mycelium and pseudomycelium are produced after 2 to 3 weeks. Spheroidal, ovoidal, or pyriform teliospores, (7.5-10)x(10-20)|im, are produced singly or in groups of 2 to 3 on mycelium at either terminal or intercalary position. Teliospores are spheroidal (10.6-13.3 |im) with apical swelling (4-8 [im); 4-8 sessile, oblong basidiospores are produced on the apical portion of the metabasidia (Fig. 320B,C). Basidiospores germinate by budding. Teliospores germinate one week after soaking in water, heating for one hour at 5TC and incubating at 25°C,

-.-*' '/-

Fig. 320. C. lari-marini. (A) Yeast cells grown on malt extract agar. Bar=10^m. (B) Basidium with relatively short metabasidium. Bar = 5(im. (C) Basidium with long metabasidium. Bar=13jim. (Fell and Statzell-Tallman 1992).

followed by plating on corn meal agar (Fell and StatzellTallman 1992). Fermentation: w Lactose Glucose Galactose w/Raffinose w/w/-

Trehalose

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + +/w

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Starch formation

+/w

Sucrose Maltose

ws

Assimilation:

-

+ +

-

+ + + +/w +/w +/w

+

-

+/w +

-

+ + +

-

+/w +

-

+

-

+

Additional assimilation tests and other growth characteristics: 50% Glucose + Cycloheximide 0.05% Growth at 3 7 T

+

Urease + Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strain studied: CBS 7420 was isolated from the mouth cavity of a dead sea gull. Type strain: CBS 7420.

80. Cystofilobasidium Oberwinkler & Bandoni / K.J. Kwon-Chung

Comments: Cystofilobasidium lari-marini was previously classified in the genus Leucosporidium because it produces white colonies with teliospores (Saez and Nguyen 1989). Saez and Nguyen (1989) did not describe the germination of teliospores or the formation of metabasidia. Studies on the nucleotide sequence of a variable region of the large subunit rRNA, however, indicated the close relationship of L. lari-marini with Cystofilobasidium rather than with Leucosporidium (Fell and Kurtzman 1990). In a subsequent study, Fell and Statzell-Tallman (1992) confirmed the relationship of L lari-marini to Cystofilobasidium by demonstrating C capitatum-like metabasidium formation in L. lari-marini. Comments on the genus Oberwinkler and Bandoni (1983) established the genus Cystofilobasidium to accommodate carotenoid-pigmented yeasts which produce hyphae with primitive dolipores and which form teliospores that germinate to produce holometabasidia with terminal basidiospores. They included two species in the genus: C bisporidii and C capitatum; both had been classified in the genus Rhodosporidium by Fell et al. (1973). Hamamoto and coworkers (1988b) added another species, C infirmominiatum to the genus on the basis of DNA-DNA homology with the other Cystofilobasidium spp., and because of certain biochemical characteristics of the species. C infirmominiatum had also been classified in the genus Rhodosporidium by Fell et al. (1973). Fell (1974) was aware of the major differences between these three species and the other Rhodosporidium spp., in the context of metabasidium morphology and biochemical characteristics. Unlike the typical species of Rhodosporidium, which produce phragmobasidia and mycelium with simple septa, Cystofilobasidium species produce holometabasidia and mycelium with dolipores (without parenthesomes). In contrast to Rhodosporidium species, Cystofilobasidium assimilates inositol and produces starch-like compounds. The two genera can also be distinguished on the basis of their whole-cell sugar composition and coenzyme Q systems. Cells of Cystofilobasidium species contain xylose, while

653

it is lacking in Rhodosporidium (Weijman et al. 1982, Weijman and Rodrigues de Miranda 1988, von Arx and Weijman 1979). Cystofilobasidium contains ubiquinone Q-8 (Yamada and Kondo 1973, Sugiyama et al. 1985), in contrast to Rhodosporidium which forms Q-9 or Q-10. Yamada and Kawasaki (1989a) compared partial sequences of 18S and 26S rRNAs from Q-8-containing species of teliospore-forming yeasts, and reported that the three Cystofilobasidium spp. cluster in the same group and are distinguishable from the other groups. Species of Cystofilobasidium share morphological similarities with the other two genera of the Filobasidiaceae, Filobasidiella and Filobasidium, by producing filobasidiaceous metabasidia; however, the presence of teliospores clearly separates the genus from Filobasidium and Filobasidiella. Other features that distinguish Cystofilobasidium from the other two genera of the Filobasidiaceae include its formation of carotenoid pigment in the yeast phase, formation of endospores in the mycelium, and the non-deciduous nature of primary basidiospores. Unlike Cystofilobasidium, species belonging to Filobasidium and the Filobasidiaceae have coenzyme Q-10 system. The anamorphs of Cystofilobasidium spp. belong to the genus Rhodotorula (Fell and Statzell-Tallman 1984) or the genus Cryptococcus. Three of the four species produce bright orange, salmon-pink to cinnamon-colored, glistening colonies. C. lari-marini can be distinguished from the other three species by the lack of carotenoid pigments. C bisporidii can be distinguished from the other two species with carotenoid pigments by its ability to assimilate melibiose. C. infirmominiatum is separated from C capitatum by splitting of arbutin, the inability to assimilate L-sorbose, and the formation of pyriform metabasidia. Study of the life cycle of Cystofilobasidium is impaired because of the low frequency of mating and the difficulty in germinating teliospores. The teliospores may germinate after growing on malt or corn meal agar for three weeks, followed by 8-11 weeks of soaking in distilled water in most species (Fell et al. 1973).

654

VIb. Descriptions of teleomorphic basidiomycetous genera and species

81. Erythrobasidium Hamamoto, Sugiyama & Komagata J. Sugiyama and M. Hamamoto Diagnosis of tlie genus Asexual reproduction is by multilateral budding. Cells are ovoidal to long ovoidal and pseudomycelium is absent. The colony color on solid media is orange-red. True mycelia are produced from single cells without mating. Clamp connections are present or absent. Septal pores are simple. Teliospores are not formed. Unicellular basidia (holobasidia) arise by the development of the lateral protrusions on the hyphae. The sessile basidiospores are produced terminally on the holobasidia; these are non-apiculate and are not forcibly discharged. Fermentation is absent. The urease test is positive. The extracellular DNase test is positive (weak). The diazonium blue B color test is positive. Xylose is absent in the cells. The major ubiquinone system is Q-10(H2). D-Glucuronate and nitrate are assimilated; mj^o-inositol is not assimilated. Starch-like compounds are not produced. Type species Erythrobasidium hasegawianum Hamamoto, Sugiyama & Komagata Species accepted 1. Erythrobasidium hasegawianum Hamamoto, Sugiyama & Komagata (1991) Systematic discussion of the species 81.1. Erythrobasidium hasegawianum Hamamoto, Sugiyama & Komagata (1991) Anamorph: Rhodotorula hasegawae Y. Yamada & Komagata Synonyms: Erythrobasidium hasegawae (Y. Yamada & Komagata) Hamamoto, Sugiyama & Komagata (1988c), incorrect combination. Art. 59, ICBN Rhodotorula hasegawae Y. Yamada & Komagata (1983)

Growth in 5% malt extract: After 3 days at 25T, the cells are ovoidal to long ovoidal, (3.8-5.8)x(6.310.5) |im, and single or in pairs. A sediment and a ring are present. Growth on 5% malt agar: After 3 days at 25T, the cells are of the same form and almost the same dimensions, (3.3-5.6)x (6.3-12.0) |im, as observed in malt extract. The streak culture is smooth, glistening and pink to reddish-pink. After one month at room temperature, the culture is orange-red. Dalmau plate culture on corn meal agar: After 10 days at 20'^C, there is true mycelium. The mycelium is initially uninucleate; during the process of clamp formation, the clamps are completed but are not always present at each cross wall (Fig. 321 A). Hyphae are dikaryotic when clamp connections are formed, and uninucleate when they are not formed (Fig. 32IB). After 50-60 days, protrusions are produced laterally on the hyphae and develop into uninucleate basidia (Fig. 32IC). These are obovate, 10-18 |im long, 1-2 [im wide near the base, and 3-5 |im wide at the apex, single, and one-celled. They appear to be diploid as their nuclei are twice as large as those of the yeast cells. The basidium produces two to four terminally sessile basidiospores on its apices.

Fig. 321. E. hasegawianum, IFO 1058. (A) Hyphae with clamp connections, after 10 days on com meal agar at 20°C. (B) Uninucleate mycelium stained by the Giemsa method. (C) Basidium after 50-60 days on com meal agar at 20"C. Arrow indicates a protmsion. (D) Germinated basidium with formation of uninucleate basidiospores, stained by the Giemsa method. (E) Haploid yeasts stained by the Giemsa method. Bar=10|im.

These basidiospores apparently are haploid (Fig. 321D,E). Subsequently, basidia repeat the budding. Life cycle: A dikaryotic mycelium with clamp connections or a uninucleate mycelium without clamps develops from a single cell without mating (Fig. 322). The mycelium produces protrusions laterally. The protrusion develops into uninucleate obovate holobasidia. Karyogamy may take place in the holobasidium. Meiosis may occur during germination, and the resulting sessile haploid basidiospores are terminal on the holobasidium. The basidiospores propagate by budding, thus returning to the yeast phase. Fermentation: absent.

81. Erythrobasidium Hamamoto, Sugiyama & Komagata /J. Sugiyama and M. Hamamoto

655

Origin of the strain studied: An old culture of beer yeast, Philadelphia, U.S.A. (Robbins and Ma 1944). Type strain: IFO 1058 (ATCC 9536, CBS 8253, lAM 12911, JCM 1545, YK 124), derived from the holotype JAM F-0146; isolated from an old culture of beer yeast, Philadelphia, U.S.A.; received from IFO.

Yeast budding cells\

Comments on the genus

Mature holobasidium with basidiespores True mycelium with clamp connection

-X

/

Young holobas-idium ^^

-

^

Protrusion

Fig. 322. Life cycle of E. hasegawianum.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s + w s +

-

+

-

+ + + s

s

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaUcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

-

+

-

+ +

-

+

-

s + +

-

n +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Urease + Arbutin splitting + Extracellular DNase +/w Starch formation Growth at 37"C Co-Q: 10(H2) (Yamada et al. 1973c). Mol% G + C: 55.7 (HPLC: Hamamoto et al. 1986b); 54.8 (7;^: Hamamoto et al. 1986b); 50.0 {T^\ Nakase and Komagata 1971c), all values were determined from IFO 1058. Xylose in the cells: Absent (Sugiyama et al. 1985). Septal pore structure: Simple (Suh et al. 1993a).

Hamamoto et al. (1988c) discovered the teleomorphic state of Rhodotorula hasegawae, which is characterized by unicellular basidia and the lack of teliospores. They proposed the new genus Erythrobasidium for the taxon and tentatively placed it in the Filobasidiaceae. Later Hamamoto et al. (1991) replaced the species name E. hasegawae (Yamada & Komagata) Hamamoto et al. (1988c) by a new name E. hasegawianum Hamamoto et al. (1991) because of an incorrect combination for the teleomorph. Only one strain (IFO 1058) is known for this species. The strain, isolated from an old culture of beer yeast, was first identified as Rhodotorula aurantiaca (Robbins and Ma 1944) and subsequently reidentified as R. lactosa (Hasegawa 1965) on the basis of assimilation of lactose and the requirement for />-aminobenzoic acid. Later Yamada and Komagata (1983) pointed out that the strain was distinguished from both R. aurantiaca and R. lactosa by DNA base composition, Co-Q system and the electrophoretic patterns of enzymes. Furthermore, it did not assimilate lactose, contrary to the description of Hasegawa (1965). On the basis of these data, Yamada and Komagata (1983) proposed the new species R. hasegawae. Suh et al. (1993a) have clarified the ultrastructural features of E. hasegawianum. They showed the cell wall to be multilayered, conidiogenesis to be enteroblastic and that the septal structure is simple with no septal swelling or parenthesomes. Such features strongly suggest that Erythrobasidium has affinity with the teliospore-forming yeasts rather than with Filobasidiaceous taxa. 18S rRNA gene sequence comparisons among the basidiomycetous yeasts supports conclusions from the ultrastructural data (Sugiyama and Suh 1993, Suh and Sugiyama 1993b). Subsequently, Suh and Sugiyama (1994) suggested a phylogenetically close relationship between E. hasegawianum and Rhodosporidium dacryoideum using neighborjoining analysis of 18S rRNA gene sequences. For further discussion, see Suh and Sugiyama (1994).

656

VIb. Descriptions of teleomorphic basidiomycetous genera and species

82. Filobasidiella Kwon-Chung K.J. Kwon-Chung Diagnosis of the genus Asexual reproduction is by budding of globose, ovoidal, or apiculate cells. Pseudo- or true mycelium is lacking in haploid cultures. Growth on solid media is white or cream-colored, and commonly mucoid. Visible carotenoid pigments are lacking. Cells are encapsulated by polysaccharide, and the degree of capsulation varies with strains as well as environmental factors. Sexual reproduction occurs following conjugation between a and a cells. Conjugated cells produce dikaryotic hyphae with clamp connections. The cross walls of the hyphae contain a typical dolipore, but lack parenthesomes (Kwon-Chung and Popkin 1976). Basidiocarps are absent. A slender holobasidium with an abruptly expanded apex arises laterally or terminally from the dikaryotic hyphae. Karyogamy takes place in the metabasidium, and the zygote nucleus undergoes meiosis in the apical area. Repeated mitosis follows meiosis, and uninucleate basidiospores bud basipetally from four spots on the apex of the metabasidium to form four chains of basidiospores. Fermentation is absent. D-Glucuronate and mj^o-inositol are assimilated, but nitrate is not assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is formed. Xylose is present in whole-cell hydrolyzates. Type species Filobasidiella neoformans Kwon-Chung Species accepted 1. Filobasidiella neoformans Kwon-Chung (1975) a. Filobasidiella neoformans Kwon-Chung var. neoformans (1982) b. Filobasidiella neoformans var. bacillispora Kwon-Chung (1982) Key to the varieties 1.

a Basidiospores spheroidal, oblong, or cylindroidal and finely roughened; D-proline is not assimilated; reaction on canavanine-glycine-bromthymol blue (CGB) agar is negative after two to five days F. neoformans var. neoformans: b Basidiospores smooth, bacillary and with or without curvature; D-proline is assimilated; CGB agar becomes blue within two to five days F. neoformans var. bacillispora:

Systematic discussion of the species 82.1.

Filobasidiella

neoformans

(1975) This species has two varieties: r^'» I. 'J* II ^ T^

Filobasidiella

neoformans

Kv^^on-Chung

A-ii_

Kwon-Chung

var. neo-

•^ 1 -ifko/* \ formans ( K w o n - C h u n g et al. 1 9 8 2 a ) Anamorph: Cryptococcus neoformans (Sanfelice) Vuillemin Synonyms: Saccharomyces neoformans Sanfelice (1895a.b) Cryptococcus neoformans (Sanfelice) Vuillemin (1901) Debaryomyces neoformans (Sanfelice) Redaelli, Ciferri & Giordano (1937) Saccharomyces lithogenes SdinioiicQ {n95h) ^ ^ j.^j .CI r 1- \\T u • / i n A i \ Cryptococcus lithogenes (Sanielice) Vuillemm (1901) Blastomyces lithogenes (Sanfelice) Sasakawa (1922) Torulopsis lithogenes (Sanfelice) de Almeida (1933) Cryptococcus hominis Vuillemin (1901) pro parte Saccharomyces hominis Costantin (1901) Atelosaccharomyces hominis (Vuillemin) Verdun (1912) Torulopsis hominis (Vuillemin) Redaelli (1931) Debaryomyces hominis (Vuillemin) Todd & Herrmann (1936) Cryptococcus costantini Froilano de Mello & Gonzaga Fernandes (1918) Torulopsis costantini (Froilano de Mello & Gonzaga Fernandes) de Almeida (1933)

p. 656 p. 657

Saccharomyces pUmmeri Costantin (1901) Torula plimmeri (Costantin) Weis (1902) Cryptococcus plimmeri (Costantin) Neveu-Lemaire (1912) Torulopsis plimmeri (Costantin) de Almeida (1933) Torula klein Weis (1902) Cryptococcw^ ^/emz (Weis) Cohn (apud Gueguen 1904)

/,

,

,

r

, , . j T^

O r^

. ,^c^c^c^^

Atelosaccharomyces busse-buschh QQ aQmrndiXm 8L GovigQVOi {\9yj9) Saccharomyces blanchardi Guiart (1910) Atelosaccharomyces breweri Verdun (1912) Cryptococcus breweri (Verdun) Castellani & Chalmers (1913) Saccharomyces breweri (Verdun) Neveu-Lemaire (1921) Torulopsis breweri (Verdun) de Almeida (1933) Torula histolytica Stoddard & Cutler (1916) pro parte Torulopsis histolytica (Stoddard & Cutler) Castellani & Jacono (1933) u i i • T7 V M.7 A /1^oo^ Cryptococcus cerebriloculosis tTQQman & WQiaman (1923) -^^ ^ ^^^"^^ ""^'^^^^ "^^"^^^ ^^^^^^ Cryptococcus nasalis (Harrison) Dodge (1935) Cryptococcus hondurianus Castellam (Castellani and Jacono 1933) Cryptococcus hominis Vuillemin var. hondurianus Castellani (Castellani ^^^ Jacono 1933) Torulopsis hominis (Vuillemin) Redaelli var. honduriana Castellani (Castellani and Jacono 1933) Cryptococcus psicrophilicus Nino (1934) Torulopsis neoformans (Sanfelice) Redaelli var. sheppei Giordano (1935) Cryptococcus meningitidis Dodge (1935)

82. Filobasidiella Kwon-Chung / K.J. Kwon-Chung

Filobasidiella neoformans var. bacillispora Chung (Kwon-Chung et al. 1982a)

657

Kwon-

ahyssinica) (Staib 1962, Shields and Ajello 1966), caffeic acid (Pulverer and Korth 1971, Hopfer and Blank 1975, Anamorph: Cryptococcus neoformans (Sanfelice) Vuillemin var. gattii Hopfer and Gr5schel 1975, Healy et al. 1977, Fleming Vanbreuseghem & Takashio et al. 1977), chlorogenic acid (Shaw and Kapica 1972) Synonyms: or, L-DOPA (Chaskes and Tyndall 1975) become brown Filobasidiella bacillispora Kwon-Chung (1976a) or dark brown to black usually within one to five days, Cryptococcus bacillisporus Kwon-Chung & Bennett (Kwon-Chung depending on the medium and the isolates. Some strains et al. 1978) Cryptococcus neoformans (Sanfelice) Vuillemin var. gattii may require eight days to produce the characteristic Vanbreuseghem & Takashio (1970) pigment on niger seed agar. Growth in 2 % malt extract: After 3 days at 2 5 T , Growth on canavanine-glycine-bromthymol blue haploid cells are mostly globose or ovoidal, occurring (CGB) agar: There is no growth, and the color of the singly or with buds (Fig. 323C). The cell size ranges medium does not change after two to five days at 25°C. from 3-8 |im, but is mostly 3-5 (im in diameter. A slight sediment is present, and a thin ring may be present as well. Life cycle: The life cycle of E neoformans is illustrated in Fig. 324. The majority of isolates are self-sterile and The sediment increases as the incubation continues. produce basidiospores upon mating with isolates of the Growth on 2% malt agar: After 3-5 days at 25°C, opposite mating type. Heterothallism is controlled by a haploid cells are globose to ovoidal, measuring 2.5-10 [i,m one-locus, two-allele (a and a) system. Cells of a and in diameter. The colony is white to cream-colored with a mating types conjugate when they are mixed on malt a smooth, mucoid texture; the margin is entire. In streak extract agar, V8 juice agar, hay infusion agar, or sucrose culture, the highly mucoid growth runs to the bottom of yeast extract agar at 25-37°C. V8 juice with 4% agar and the slant within one week. hay infusion agar have been the two media most effective for formation of the metabasidia. I I

a ©3

Basidiospores IVIeiosis

©p« Germination Basidium /^7N (Karyogamy) V J

• |o

Dikaryon

! Conjugation

( ^ I ®

l-iaplophase

Fig. 324. Life cycle of F neoformans.

Fig. 323. F. neoformans var. neoformans. (A) Basidial structure with "hausteriod" hyphae. (B) Basidiospores are released from the basidium. Bar= 10 ^m. (C) Yeast cells grown on malt extract agar.

Dalmau plate culture on corn meal agar: Pseudomycelium or mycelium is absent in haploid cells. Growth on agar medium containing phenolic compounds: Haploid colonies on media containing substances such as extract of niger seed (Guizotia

Dikaryotic hyphae with clamp connections develop within three to five days from the conjugants. After one week, mycelial growth is most evident around the margin of the colony. Hyphae are thin (average 3 |im wide) and hyaline, with a clamp connection at each septum. Regular hyphal branching occurs at clamp connections, and also irregular, thin (1-1.5 fxm wide) branches termed "haustorioid" branches originate from clamps. Blastospores bud out from the side or the tip of the hyphae; these are indistinguishable from haploid yeast cells in their size and shape. Mature basidia arise within one to two weeks, singly or in a group, laterally

VIb. Descriptions of teleomorphic basidiomycetous genera and species

658

MITOSIS AND BUDDING

NUCLEAR MIORATION

MITOSIS AND BUDDING

NUCLEAR MIGRATION

or terminally on the hyphae. Basidia are nonseptate, slender, and uniformly wide in the basal area, but expand abruptly to form oblong to clavate apices (4-10)x(613)|im(Fig. 323A,B). The apical enlargement is often at an angle to the main axis of the basidium. Diploidization occurs in the basidium, and meiosis takes place near the apex of the basidium. Basidiospores are ovoidal, ellipsoidal, cylindroidal, pyriform to globose (1.8-3x2-5 [im in diameter), with finely roughened walls and with or without truncate bases. They are produced by basipetal budding directly from four spots on the basidial apex. The chain of basidiospores may contain more than 20 spores per chain. The basidiospore chains collapse into spore balls under humid conditions. Some basidia produce fewer than four initial spores, and these spores are usually twice the size of typical spores. Rarely, more than four initial basidiospores are produced, and extensive chain formation has not been observed in such basidia. Initially, spores are dry and a capsule is not visible until the spores enlarge to twice the original size and undergo profuse budding. Budding of basidiospores results in mucoid colonies of yeast cells representing a, a, or infrequently aa (self-fertile) mating types. Cytological (Kwon-Chung 1976b) and genetic (KwonChung 1980) studies indicate that the four small nuclei of the first meiotic product remain in the apical part of the basidium and each nucleus divides mitotically. Daughter nuclei migrate into basidiospores, while parent nuclei divide repeatedly during basipetal budding to form uninucleate basidiospores in chains. The spore chains show random distribution of nuclei and, as a result, the spores from a single chain are not genetically identical (Fig. 325). Monokaryotic fruiting: Shadomy (1970) demonstrated hyphal formation in 11 single cultures (Lurie and Shadomy 1971), and three of the hyphae-forming isolates completed basidial formation without apparent mating (Erke 1976). The isolates were all from human cryptococcosis cases. The isolates first grew in yeast form and produced hyphae with clamp connections either from single yeast cells or from a pair of yeast cells connected by a clamp connection. Hyphal cells were monokaryotic but dikaryons were observed in terminal cells in some strains. In some strains, however, dikaryons were not restricted to terminal cells. The morphological aspects of the basidium and basidiospores produced in self-fertile strains were the same as in the mated cultures except that in the former.

MITOSIS AND BUDDING

NUCLEAR MIGRATION

Fig. 325. Nuclear division and the formation of basipetal basidiospore chains in E neoformans (Kwon-Chung and Fell 1984).

hyphae showed incomplete clamp connections (clamps not fiised to the adjoining cells). Colonies developed from single basidiospore cultures obtained from such fruitings were capable of repeating the whole life cycle, but the yeast cells isolated from such colonies became markedly weaker in sporulation in subsequent generations. Erke (1976) suggested that these strains are primarily homothallic; and others designated these strains as self-fertile, though principally heterothallic (Kwon-Chung 1977a). The genetic basis of the self-fertility in these strains was hypothesized to be a diploid state, containing both a and a alleles. Recently, it was found that this so-called selffertility is a monokaryotic fruiting primarily occurring in the a isolates. Monokaryotic fruiting has been observed in many genera of the Homobasidiomycetes (Stahl and Esser 1976). Wickes et al. (1996) observed that a majority of a isolates tested can produce monokaryotic fruiting on a medium deprived of nitrogen such as Yeast Nitrogen Base without ammonium sulfate. The association of the a mating type with "self-fertility" had been noted twenty years ago (Kwon-Chung 1977a), when it was found that all the self-fertile cultures eventually behave as a type when the self-fertility becomes suppressed during the prolonged maintenance on rich media. This phenomenon, however, was thought to be due to the loss of the a factor. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + +/w +

-

+/w + V

+ + +/w + V

+ V

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V

-

w

-

V

+ + + + + +

-

V V

+

-

82. Filobasidiella Kwon-Chung / K.J. Kwon-Chung

659

CGB medium to blue-green within two to five days. The life cycle of var. bacillispora resembles that of E neoformans except that haustorioid hyphae have not been observed (Fig. 326). E neoformans var. bacillispora has not been isolated from pigeon droppings or soil and does not share an ecological niche with the neoformans variety. The natural habitat of this variety is reported to be the Red River gum tree, Eucalyptus camaldulensis (Ellis and Pfeiffer 1990). Mol% G + C of the variety bacillispora: 56.3-57.2, three strains (7^: Aulakh et al. 1981). Origin of the strains belonging to the variety neoformans: CBS 132 (type strain of Cryptococcus neoformans) from peach juice; CBS 6885 (a type) from a human bone lesion; CBS 6886 {a type) and NIH 433 isolated from pigeon excreta in Denmark; CBS 6900 and CBS 6901, single basidiospore progenies obtained from CBS 6885xNIH 433. The natural habitat is pigeon and other avian excreta and soil. Complementary mating types and living reference strains: CBS 6885 (a type) and CBS 6886 (a type). Holotypes: BPI 71843, a slide mount of basidial structures prepared from the cross CBS 6885 (a)xCBS 6886 (a), was deposited in the herbarium of the National Fungus Collection, Beltsville, MD. The holotype of the type culture of Cryptococcus neoformans var. neoformans (BPI ll^Al) has also been deposited at the National Fig. 326. F. neoformans var. bacillispora. Bar= lOfxm. (A) Conjugating Fungus Collection.

cells. (B) Hyphal formation by a pair of conjugated cells. (C) Hyphae with clamp connections. (D) The first set of four basidiospores are produced at the apex of a basidium. (E) Release of the first set of basidiospores and production of the second set of basidiospores. (F) The contrast between yeast cells and basidiospores (Kwon-Chung 1976a).

Additional assimilation tests and other characteristics:

growth

Urease Splitting of arbutin Growth on 50% w/w L-Malate glucose—yeast extract agar Ascorbic acid Cycloheximide 12|im/ml Thiamine-free Growth at 2>TC V D-Saccharate Growth at 40°C + Starch formation Co-Q: 10 (Sugiyama et al. 1985). Mol% G + C: 53.2-56.7, three strains {T^\ Aulakh et al. 1981).

Supplementary description of E neoformans var. bacillispora: This variety can be readily differentiated from the var. neoformans by morphological and biochemical characteristics. In contrast to 7^ neoformans var. neoformans, E neoformans var. bacillispora produces smooth and bacillary-shaped basidiospores measuring ( 1 1.8) X (3-8) [Jim, but produces no haustorioid hyphae. The anamorph of E neoformans var. bacillispora, Cryptococcus neoformans var. gattii, tends to produce more ovaland lemon-shaped, (3-5) x (3-7) |im, yeast cells rather than globose cells. The growth rate of the two varieties is the same at 25°C, but at 2>TC, var. bacillispora grows slower than var. neoformans. Unlike E neoformans var. neoformans, the var. bacillispora can utilize D-proline as a sole source of nitrogen and changes the color of

Origin of the strains belonging to the variety bacillispora: Eleven strains from human cases of cryptococcosis. CBS 6992 (serotype B) and CBS 6993 (serotype C) were originally received from Dr. Evans. Complementary mating types and living reference strains: CBS 6956 (a mating type, serotype B, from sputum) and CBS 6955 {a mating type, serotype C, from spinal fluid). Holotypes: A slide mount (BPI 71855) of basidial structures prepared from the cross CBS 6992 x CBS 6993 has been deposited in the herbarium. National Fungus Collection, Beltsville, MD. The holotype of Cryptococcus neoformans var. gattii, and the anamorph or E neoformans var. bacillispora, are preserved at the Laboratory for Mycology of the Institute of Tropical Medicine, Antwerp, Belgium (De Vroey and Gattii 1989). Comments on the genus The disease caused by Cryptococcus neoformans, the haploid state of E neoformans, was first reported by Busse in 1894. Busse was a pathologist who observed the round to oval "corpuscles" in a tumor of the tibia of a woman (Busse 1894) who was diagnosed with a soft sarcoma. Busse isolated a culture from the lesion, and one of his colleagues thought that it was a pathogenic species of blastomycetes {fide Sanfelice 1895a). Buschke, a physician who took care of the patient, thought that the etiologic agent was a coccidia (Buschke 1895).

660

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Soon after Busse's report, Sanfelice isolated an encapsulated yeastlike fungus from peach juice and named it Saccharomyces neoformans (Sanfelice 1894). In 1895, Sanfelice proved the pathogenicity of S. neoformans by inoculating the yeast into experimental animals (Sanfelice 1895a). He recognized the similarity between S. neoformans and Busse's isolate. In the same year, he isolated a "Saccharomyces'' which was thought to be the same fungus as S. neoformans from the lymphatic glands of an ox which had died from a primary liver infection (Sanfelice 1895b). In 1901, Vuillemin transferred the fungus to the genus Cryptococcus as C. hominis, because he did not find ascospores that characterize the genus Saccharomyces (Vuillemin 1901). Cryptococcus neoformans had been regarded as a homogeneous species except for the existence of four serotypic variations. A, B, C, and D (Evans 1949, 1950, Wilson et al. 1968) among the isolates. Since the discovery of two morphologically different sexual states among the isolates of C neoformans, it became clear that the isolates of serotypes B and C are ftmdamentally different from the isolates of serotypes A and D (Bennett and Kwon-Chung 1989). Initially, C neoformans was considered to contain two different teleomorphic species: F neoformans (Kwon-Chung 1975) and F bacillispora (KwonChung 1976a). The F neoformans state was produced by the cross between two mating types of serotype A or D isolates, whereas the F bacillispora state was observed when crosses were made among serotype B or C isolates. Intercrossing between A, D and B, C isolates usually produces basidia with two types of spores: oblong to lemon-shaped spores of F neoformans type, and bacilliform spores of F bacillispora type. In some crosses, however, the spores were predominantly of F bacillispora type (Rogers et al. 1980). The spores produced by the intercrossings between the type cultures of the two species and many other pairs were sterile; however, CBS 6991 {a type, serotype D) produced viable basidiospores (30%) when crossed with CBS 6956 (a type, serotype B). The viable basidiospores produced a 1:1 ratio of a and a mating types, but all were serotype D. All the a type Fi isolates assimilated L-malate, while a type did not. Since 70% of the basidiospores were nonviable, it was not possible to analyze whether the viable progeny were recombinants or whether the D factor was a dominant cytoplasmic factor. Further genetic analyses between the two species of Filobasidiella indicated that they can be more appropriately classified as two varieties of one species. Aulakh et al. (1981) showed 55-63% relatedness between the DNAs of 7^ neoformans and F bacillispora. Furthermore, the type strain of C neoformans var. gattii Vanbreuseghem and Takashio (1970) mated with F neoformans and produced basidiospores. The type culture of C neoformans var. gattii was physiologically and morphologically indistinguishable from the anamorph of the type strain of i^ bacillispora. On the basis of these results, F bacillispora was reclassified as F neoformans var. bacillispora (Kwon-Chung et al. 1982a).

Cryptococcus neoformans var. neoformans, the haploid state of F neoformans var. neoformans, and C neoformans var. gattii, the haploid state of F neoformans var. bacillispora, show considerable differences in their electrophoretic karyotype. Wickes et al. (1994) were able to separate 13 chromosome-sized DNA bands in the reference strains of F neoformans var. neoformans and 13-14 bands in the reference strains of 7^ neoformans var. bacillispora, but the smallest band of F neoformans var. neoformans was approximately 250 kb larger than that of the var. bacillispora. The anamorphs of the two varieties also show differences in ecology and epidemiology. Pigeon droppings and, less frequently, other bird droppings have been known as the major environmental source of C neoformans var. neoformans (Emmons 1955). Pigeons seem to be a carrier of C neoformans var. neoformans, since pigeons caged in different parts of the world contain the fungus in their crops. Our test with 11 isolates obtained by Vanbreuseghem from pigeon crops (caged pigeons) showed all to be serotype A. Isolates of serotype D were frequently found in pigeon droppings collected in northern Europe (Bennett et al. 1977). Although infrequent, C. neoformans var. neoformans has been isolated from rotting vegetables, fruits and fruit juices, wood, dairy products, and soil contaminated with pigeon droppings. The ecological niche of F neoformans var. neoformans is not known. It is suspected that the natural reservoir of F neoformans var. neoformans is different from that of C neoformans var. neoformans for the following reason: the isolates of C. neoformans var. neoformans isolated from pigeon droppings, pigeon nests, and soil in the United States have all been of the mating type a (KwonChung and Bennett 1978). If the primary ecological niche of F neoformans is avian droppings, both a and a mating types should have been found from these sources. Similarly, Tremella (jelly fungi), another fungus phylogenetically related to F neoformans, is found as a saprophyte on dead tree branches, while its haplophase is isolated from various other substrates besides dead tree branches. Unlike C neoformans var. neoformans, C neoformans var. gattii has not been found from a wide range of substrates. It has not been isolated from pigeon or any other bird droppings. Until recently, C. neoformans var. gattii has only been isolated from clinical specimens collected from humans and animals. An isolation of C. neoformans var. gattii serotype C from the environment was reported by Denton and DiSalvo (1968), but the isolate was subsequently determined to be an A serotype of the variety neoformans. Ellis and Pfeiffer found the natural habitat of C. neoformans var. gattii serotype B (Elhs and Pfeiffer 1990, Pfeiffer and ElHs 1992). They isolated several strains from wood bark and leaves lying under the canopies of Eucalyptus camaldulensis and E. tereticornis in Australia. The serotype B isolates of the variety gattii were also isolated from materials collected in a koala enclosure in Australia (Pfeiffer and

82. Filobasidiella Kwon-Chung / K.J. Kwon-Chung

Ellis 1993). Three strains of C neoformans var. gattii isolated from E. camaldulensis by Ellis and Pfeiffer were tested in our laboratory and were found to produce fatal infections in mice. When rDNA sequences specific for C. neoformans were used to probe RNA extracted from the cultures, the signals of hybridization were equally intense between clinical strains and Eucalyptus-or\gm2iXQ6. strains (Kwon-Chung et al. 1992). Attempts to produce the Filobasidiella state from these isolates by crossing with type strains of both varieties of E neoformans failed. This was not surprising, since a previous study showed at least 26% of serotype B isolates to be sterile (Kwon-Chung and Bennett 1978). The isolation of C neoformans var. gattii from E. camaldulensis has epidemiological significance, since the distribution pattern of E. camaldulensis corresponded to reported cases of cryptococcosis caused by C neoformans var. gattii in Australia (Ellis and Pfeiffer 1990). Prior to the epidemic of acquired immunodeficiency syndrome (AIDS), cryptococcosis was most commonly reported from patients with leukemia or other kinds of cancer, sarcoidosis, and rheumatoid arthritis (with steroid therapy). Since the early 1980s, AIDS became the leading predisposing condition for cryptococcosis. In the United States, at least 50% of the total cryptococcosis cases reported annually are from AIDS patients, ranking as the fourth most life-threatening infection in these patients. According to one study, in 106 AIDS patients with cryptococcal infection, cryptococcosis was the first manifestation of AIDS in 45% of these patients (Chuck and Sande 1989). The epidemiological studies of the two varieties conducted prior to the AIDS epidemic indicated that infections caused by isolates of C. neoformans var. neoformans is worldwide in distribution. Infections caused by isolates of C neoformans var. gattii, however, were prevalent in tropical and subtropical regions and were rarely found in regions with cold climates (Kwon-Chung and Bennett 1984). Because cryptococcosis occurs most commonly in AIDS patients, and almost all AIDS patients with cryptococcosis are due to the var. neoformans regardless of the geographic location, the overall frequency of infection due to var. gattii had diminished drastically since the advent of AIDS. Studies of isolates from two regions previously known as the high-prevalence areas for C neoformans var. gattii, Southern California and Brazil, indicated that C neoformans var. gattii still causes infection frequently in non-AIDS patients. This indicates that C. neoformans var. gattii is not disappearing from the environment but that AIDS patients may be more predisposed to infection by C neoformans var. neoformans than to var. gattii, or they may be less exposed to the source of var. gattii than to that of var. neoformans (Kwon-Chung et al. 1990). The holotype strains of E neoformans var. neoformans have been proven to be highly virulent for mice. The holotype strains of E neoformans var. bacillispora (from clinical source), however, are of low virulence (or

661

avirulent) in mice (Kwon-Chung et al. 1982a). Isolates of C neoformans var. gattii from Eucalyptus, on the other hand, are as virulent in mice as those of the var. neoformans (Kwon-Chung et al. 1992). The low virulence of the isolates of E neoformans var. bacillispora from clinical sources was partly explained by their growth rate at 37°C in vitro. E neoformans var. bacillispora has a longer doubling time at 37°C than E neoformans var. neoformans (Kwon-Chung et al. 1982a). In humans, however, E neoformans var. bacillispora causes no less severe infection than E neoformans var. neoformans. Because of the medical importance of E neoformans, various methods for rapid identification were developed. Staib (1962) found that C. neoformans was the only tested yeast species to produce dark brown colonies when grown on an agar medium containing niger seed (Guizotia abyssinica) extract. Shields and Ajello (1966) developed a medium for selective isolation of C. neoformans by incorporating an extract of G. abyssinica into an agar medium containing glucose, creatinine, chloroamphenicol, and diphenyl. Pulverer and Korth (1971) found that various o- and /7-diphenols and o-triphenols produced results similar to the G. abyssinica extract. Strachan et al. (1971) determined that hydroxyl groups in the 3 and/or 4 position of the phenyl ring were common to all compounds which give rise to dark brown pigment. Shaw and Kapica (1972) reported that 3,4-dihydroxyphenylalanine phenoloxidase found in the cells of C neoformans catalyzes melanin synthesis from o-diphenols, but not from tyrosine. According to our experience, niger seed agar gave the most consistent results of melanin formation within 1-5 days compared to chlorogenic acid agar or DOPA agar. Isolates of C neoformans var. gattii may, on the average, take longer to produce the color, and the intensity of the pigment may be weaker than that of var. neoformans. The concentration of the carbon sources in the medium plays a decisive role for the rapid formation of pigment (Nurudeen and Ahearn 1979). Media containing \% or higher concentrations of glucose delay the formation of melanin compared with media containing 0.1 or 0.05%. Most isolates of the two varieties produce brown colonies within 1-3 days on niger seed agar with 0.1% glucose. Total elimination of glucose from niger seed agar allowed 60 of 89 isolates to develop the pigment within 12 hours (Palawal and Randhawa 1978). Williamson (1994) found that the transcriptional activity of the structural gene coding for diphenoloxidase (CNLACl) is derepressed when C. neoformans is grown in the absence of glucose. Biochemical aspects of phenoloxidase and melanin synthesis in C. neoformans were studied (Polacheck et al. 1982, Polacheck and KwonChung 1988, WiUiamson 1994) and were found to be similar to that found in melanoma cells, except that it starts from DOPA instead of tyrosine. The ability to form melanin was shown to be one of the important virulence factors in C neoformans. The mutants lacking phenoloxidase activity were found to have lost the ability to cause fatal infection in mice, and their virulence was

662

VIb. Descriptions of teleomorphic basidiomycetous genera and species

restored when the mutants reverted to show phenoloxidase activity (Rhodes et al. 1982, Kwon-Chung and Rhodes 1986). Employing molecular methods, Salas et al. (1996) confirmed that the CNLACl gene plays a significant role in virulence for mice. Several one-step diagnostic media to distinguish the isolates of the two varieties have been developed on the bases of their biochemical differences. Only C. neoformans var. gattii grows on CGB medium and produces a blue color, because it can utilize glycine as the sole source of carbon and nitrogen, in addition to being resistant to L-canavanine (Kwon-Chung et al. 1982b). Only C. neoformans var, gattii isolates grow on D-proline agar because they can utilize D-proline as a nitrogen source (Dufait et al. 1987). C neoformans var. gattii grown on an agar medium containing ethylenediaminetetraacetate (EDTA) produces no urease activity in rapid urea broth, because the enzyme is sensitive to EDTA. The urease of C neoformans var. neoformans, however, is resistant to EDTA (Kwon-Chung et al. 1987). Most isolates of the two varieties are sensitive to ^ 12|ig/ml of cycloheximide and, therefore, agar media containing cycloheximide, such as mycosel agar, should not be used for isolation. Isolates of C neoformans var. gattii grow very slowly at 37°C, and the primary isolation tubes or plates should be incubated at 30-35*^0. The optimum growth temperature for both varieties is 32''C. A mechanism of basidiospore formation, similar to Filobasidiella species (Kwon-Chung 1976b), is not found in the other genera belonging to the Filobasidiales, and the author is not aware of any comparable situation in the basidiomycetes in general. Species of Schroeteria previously considered to belong the Ustilaginales produce spores in chains, but they are produced by acropetal budding (Zundel 1953) rather than basipetal budding as in the case of Filobasidiella. Recently, Nagler et al. (1989) concluded that the genus Schroeteria should be excluded from the Ustilaginales because the species of Schroeteria possessed septal pores, Woronin bodies, and cell walls characteristics of Ascomycetes. The cytology of basidiospore formation by E neoformans partly resembles that of Ustilago species (Alexopoulos and Mims 1979). In Ustilago maydis, the nuclei of the first meiotic product divide mitotically and daughter nuclei migrate into the basidiospores (sporidia), while parent nuclei remain in the promycelium. Unlike Filobasidiella species, however, the four daughter nuclei are separated from each other by septa of the promycelium, and basipetal chains of sporidia are not produced. Progress on the molecular biology of E neoformans has been made since a method for spheroplast formation and the isolation of high molecular-sized DNA using Novozyme was described (Rhodes and Kwon-Chung 1985). Mitochondrial restriction patterns of the two varieties have shown a great deal of polymorphism (Varma and Kwon-Chung 1989). Numerous genes, including rDNA (Restrepo and Barbour 1989, Kwon-Chung and

Chang 1994) URA5 (Edman and Kwon-Chung 1990), TRYPl (Perfect et al. 1992), DHFR (Sirawaraporn et al. 1993), HISS (Parker et al. 1994), NMT (Lodge et al. 1994), CAP59 (Chang and Kwon-Chung 1994), CNLACl (Williamson 1994), GAL7 (Wickes and Edman 1995) and various others (Wickes et al. 1994) were cloned from F neoformans var. neoformans. The transformation was accomplished in both varieties by using plasmids containing the URA5 gene or ADE2 gene as the selection markers (Edman and Kwon-Chung 1990, Toffaletti et al. 1993, Lodge et al. 1994). The CAP59 and the CAP64 genes responsible for synthesis of the polysaccharide capsule have been proven by molecular methods to be essential for virulence in C. neoformans. Deletion of these genes in a wild type strain resulted in the loss of capsule as well as the loss of virulence in mice. Conversely, acapsular, avirulent mutants with lesions in the CAP59 and the CAP64 loci regained capsule and virulence when the strains were complemented with the genes (Chang and Kwon-Chung 1994, Chang et al. 1996). Malloch et al. (1978) isolated a filamentous fungus from a dead spider and described it as Filobasidiella arachnophila. Samson et al. (1983) found that E arachnophila is identical to a fimgus previously known as Aspergillus depauperatus Petch. Since A. depauperatus morphologically resembled Filobasidiella rather than Aspergillus, Samson et al. (1983) described a new combination E depauperata (Petch) Samson, Stalpers and Weijman. Like E neoformans, E depauperata produces four spore chains on the apex of the basidium; however, E depauperata lacks clamp connections and haustoriumlike structures in the hyphae and produces no yeast cells in any part of its life cycle. E depauperata also lacks the key biochemical markers of E neoformans, namely the ability to hydrolize urea, to oxidize diphenols, to assimilate inositol, and to synthesize starch-like compounds (Khan et al. 1981a). Despite these differences, the phylogenetic trees of Heterobasidiomycetes constructed on the bases of the 18S, 5.8S and 26S rDNA sequences (KwonChung et al. 1995, Mitchell et al. 1992, Gueho et al. 1993) indicate that E depauperata is most closely related to E neoformans and that both species have evolved from the Tremella-linQSigQ. Ultrastructural studies of E depauperata support its proposed Tremella-linQSigQ (Kwon-Chung et al. 1995). The spindle pole bodies of E depauperata and F neoformans are nearly identical to those reported for Tremella globosa (Berbee and Wells 1988, Mochizuki et al. 1987). Hyphal septa of E depauperata demonstrate dolipores with parenthesomes consisting of the separate cupulate vesicles typical of Tremella species. Some basidia of E depauperata show evidence of partial longitudinal apical division (KwonChung et al. 1995). Such partially septated basidia were seen in Rhynchogastrema coronata of the Tremellales (Metzler et al. 1989). E depauperata, however, is not discussed in this chapter because it lacks a yeast stage.

663

83. Filobasidium Olive / K.J. Kwon-Chung

83. Filobasidium Olive K.J. Kwon-Chung Diagnosis of the genus Asexual reproduction by budding of globose, ovoidal, ellipsoidal or elongated cells. Pseudomycelium and true mycelium may be produced. Growth on solid media is white, cream-colored, or slightly pinkish, and often mucoid. Sexual reproduction is heterothallic (Fig. 327), and following mating, the mycelium produces lateral or terminal holometabasidia. Basidiocarps are absent. Sessile basidiospores are produced terminally on the apex of the metabasidium in a petal-like whorl, giving the basidium a flower-like appearance in an apical view. Clamp connections are present at cross walls, and the septa contain typical dolipores with or without parenthesomes. Haploid budding

Mature basidium

Young Basidia /•/

Dikaryon h Fig. 327. Life cycle of Filobasidium.

Fermentation may be present. D-Glucuronate, wj^o-inositol and nitrate are sometimes assimilated. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-9 or 10 are formed. Xylose is present in whole-cell hydrolyzates. Type species FilobasidiumfloriformeOlive Species accepted 1. Filobasidium capsuligenum (Fell, Statzell, I.L. Hunter & Phaff) Rodrigues de Miranda (1972) 2. Filobasidium elegans Bandoni & Oberwinkler (1991) ?>. FilobasidiumfloriformeOlive (1968) 4. Filobasidium globisporum Bandoni & Oberwinkler (1991) 5. Filobasidium uniguttulatum Kwon-Chung (1977) Key to species See Table 68. 1. 2(1). 3(1).

a b a b a b

Basidiospores less than 10 ^im long -^ 2 Basidiospores more than 10|im long -^ 3 Basidia with up to 10 reniform to ovoidal (3-5x4-9 ^im) basidiospores per basidium Basidia with up to 5 subglobose to apiculate-ovoidal (6-8.5 x 8-9 ^im) basidiospores per basidium Basidia more than 200 |im long; basidiospores 6-9 \xm wide Basidia mostly less than 140 ^im long; basidiospores mostly less than 6 |im wide -^ 4

F. uniguttulatum: p. 667 F globisporum: p. 667 F floriforme: p. 666

VIb. Descriptions of teleomorphic basidiomycetous genera and species

664 4(3).

a Basidiospores mostly allantoid or reniform b Basidiospores ellipsoid to fusiform

E elegans: F. capsuligenum:

p. 665 p. 664

Table 68 Key characteristics of species in the genus Filobasidium Species

Glucose fermentation

Filobasidium capsuligenum

+

F elegans

-

F floriforme F globisporum F uniguttulatum

Assimilation Lactose

Melezitose

Nitrate

Growth at 37«C w/-

Basidiospores

ellipsoidal to fusiform (4-6)x(9-13)^im allantoid to reniform (4.5-7)x(8.5-15)|im ellipsoidal to ovoidal (6-9) x (10-17) ^im

-

subglobose to apiculate-ovoidal (6-8.5)x(8-9)|im

-

reniform to ovoidal (3-5) x (4-9) ^im

Systematic discussion of the species 83.1. Filobasidium capsuligenum (Fell, Statzell, I.L. Hunter & Phaff) Rodrigues de Miranda (1972) Anamorph: Candida japonica Diddens & Lodder Synonyms: Leucosporidium capsuligenum Fell, Statzell, I.L. Hunter & Phaff (1969) Torulopsis capsuligena (as T. capsuligenus) van der Walt & van Kerken (1961b) Candida capsuligena (van der Walt & van Kerken) van Uden & H.R. Buckley (1970) Torulopsis alba (as T. albus) Saito & Oda (1934) Candida japonica Diddens & Lodder (1942) Azymoprocandida japonica (Diddens & Lodder) Novak & Zsolt (1961)

Growth in 2% malt extract: After 3 days at 25^C, the haploid cells are subglobose, ovoidal, ellipsoidal to elongated, (2.5-10.7)x(4.0-17.8)[im, single or in pairs. A thin ring and a little sediment are formed. CBS 4736 produced a heavier film than the remaining two strains tested. After one month, there is a moderate to thick slimy ring and a heavy sediment. Growth on 2% malt agar: After three days, the cells are similar in size and shape (Fig. 328A) to those formed in malt extract, except that elongated pseudomycelial cells occur. The streak culture is white to cream-colored, and the texture varies from dry to mucoid. The colony margin is entire and smooth or with tufts of mycelium. After 3 weeks, mating type a and a strains show differences in colony morphology. Strains of a type are mucoid, glistening, cream-colored, with a raised surface and smooth margin; mycelium is lacking. Colonies of mating type a have a soft, moist or dry texture and are not mucoid. The margin of the colony is undulate and heavily myceliated. The mycelium consists of branched, septate hyphae. Dalmau plate culture on corn meal agar: Pseudomycelium or mycelium is absent in mating type a, while true mycelium is present in mating type a. Occasionally, a few short chains of undifferentiated, globose cells may be present.

Fig. 328. F capsuligenum. (A) Yeast cells grown on malt agar for 3 days. Bar= 10 ^m. (Bl) Young basidium. (B2) Mature basidium.

Life cycle: On corn meal agar, conjugation occurs between two mating types within 12 hours of mixing at room temperature. Dikaryotic hyphae with clamp connections grow out from a conjugated pair within 48 hours. After 3 weeks, slender, holometabasidia measuring (3.06)x(70-140)[im are produced laterally or terminally on the dikaryotic mycelium (Fig. 328B1); five to nine sessile ellipsoidal to fusiform basidiospores, (4-6) x (9.5-13) |im, bud on the apices of the metabasidia (Fig 328B2). Occasionally, single isolates may produce mycelium and basidial structures without apparent mating. Fermentation: Glucose Galactose Raffinose Maltose

+ v

Lactose Trehalose Sucrose

-

83. Filobasidium Olive / K.J. Kwon-Chung

665

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s

-

+ + +/w +

-

+ V

V V V

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V

-

w +/w

-

+

V

+ +/w + s V

-

s +/w + V

V Additional assimilation tests and other g row! characteristics: + 2-Keto-D-gluconate Starch formation + D-Saccharate Urease D-Glucuronate Nitrite + -

Fig. 329. F. elegans (Bandoni et al. 1991). (A) Probasidia, a mature basidium with basidiospores and liberated basidiospores (allantoid or reniform). Top view of basidiospores while they are on the basidium (circular arrangement shown on the top left corner). Bars=10|im. (B) Basidia with basidiospores. Bar = 5 |im.

is 3.5-5.5 (im in the middle portion and 6-6.5 |im at the apex bearing basidiospores. Basidia bear 5 to 8 sessile basidiospores that leave minute scars of attachment + Growth at 3 0 T L-Lysine + on the surface of the apex after secession. After the + Growth at 3 7 T w/Ethylamine spore secession, basidia collapse inward. Basidiospores, 50% Glucose (w/w)(4.5-7.5 X 8.5-15) |im, which are reniform or infrequently yeast extract agar ellipsoidal, are usually arranged in a circle of 4 or 6 around Vitamin requirement: Thiamine or thiamine+ biotin. Co-Q: 10 (Yamada and Kondo 1972a). a single central basidiospore (Fig. 329A). The circular Mol% G + C : 4 9 . 8 ( r „ : Nakase and Komagata 1971c). arrangement is usually retained for a short time after Origin of the strains studied: CBS 1906 {a type) release. Basidiospores germinate by budding. described as Torulopsis albus by Saito and Oda (1934) and Fermentation: absent. isolated from sake-moto; CBS 4381 {a type) from cider by Assimilation: Beech, Bristol; CBS 4736, type culture of Leucosporidium Glucose + A/^-Acetyl-D-glucosamine n Methanol capsuligenum (a type) from a wine cellar and described Galactose Ethanol as Torulopsis capsuligenus (van der Walt and van Kerken L-Sorbose Sucrose s Glycerol 1961b); CBS 4173 from grapes in Germany; CBS 6122 Maltose + Erythritol from forest soil, Braunschweig, Germany. Ribitol Cellobiose Complementary mating types: CBS 1906 {a) and Trehalose Galactitol s D-Mannitol s Lactose CBS 4763 (a). V D-Glucitol Melibiose Type strain: CBS 1906. Raffinose a-Methyl-D-glucoside Salicin Melezitose 83.2. Filobasidium elegans Bandoni & Oberwinkler Inulin D-Gluconate w DL-Lactate Soluble starch (Bandoni et al. 1991) Succinate V + Growth on 2% malt agar: The cells multiply by D-Xylose V Citrate L-Arabinose s unipolar budding, and are predominantly ellipsoidal, (2.5- D-Arabinose Inositol 5)x(3.5-7.5)[im, but a few cells may be elongate or D-Ribose n Hexadecane Nitrate spheroidal to subspheroidal. Colonies are mucoid and L-Rhamnose Vitamin-free D-Glucosamine grayish-white to pale cream in color. growth Additional assimilation tests and other Life cycle: Sexuality of E elegans has not been characteristics: defined. Thin-walled, hyaline hyphae (2-3 |im diameter) 2-Keto-D-gluconate + Urease with clamp connections and haustorial branches produce D-Saccharate Nitrite clavate, thin-walled probasidia singly or arranged in a D-Glucuronate • Thiamine-free 0.01% Cycloheximide loose to relatively thin compact hymenium-like aggrega- Creatinine 1% Acetic acid L-Lysine tion. Each probasidium elongates to become a tubular Growth at 25''C + Ethylamine basidium with an abruptly swollen apex (Fig. 329); mature Starch formation Growth at SOT + basidia (65-165 ^m long) have thick walls, especially Co-Q: Not determined. near the apex (Fig. 329B). The diameter of basidia Mol% G + C: Not determined.

666

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Origin of the strain studies: CBS 7638, 7639, 7640, and 7641 were all isolated from dead inflorescence of Yucca breuifolia collected near Gorman, Los Angeles County, California. Holotype: E elegans on weathered inflorescence scape of Yucca breuifolia, collected 10 miles east of Gorman, Los Angeles County, California, was deposited in the herbarium, National Fungus Collection (BPI 118718). Comments: Filobasidium elegans was described by Random et al. (1991) from a fungus collected on a weathered inflorescence scape of various Yucca species in California. The anamorph of 7^ elegans is a budding, yeastlike fungus that produces mucoid colonies with a grayish-white to pale cream color. The physiology of E elegans was not characterized by the authors and the carbon assimilation profile was extracted from the CBS data base. 83.3. Filobasidium floriforme Olive (1968) Growth in 2 % malt extract: After 3 days at 2 5 T , the haploid cells are subglobose, ovoidal, or ellipsoidal to long-ovoidal, (2.5-6) x (3-8) |im, single, in pairs, or in small clusters. A small amount of sediment is present. After one month, a moderate ring and sediment are present. Growth on 2 % malt agar: Cell morphology is similar to that in malt extract (Fig. 330A). The streak culture is dull-white to cream-colored and highly mucoid after one month. The colony margin is entire with no mycelium. On corn meal agar, growth is thin, and some strains bear a tinge of pink color. Dalmau plate culture on corn meal agar: Pseudoand true mycelium are absent in the haploid state. Life cycle: Conjugation occurs when cells of two compatible mating types are mixed on V8 juice or hay infusion agar. Soon after conjugation, dikaryotic hyphae with clamp connections are produced from the conjugant.

The hyphal septum contains a dolipore but not parenthesomes. Long slender holometabasidia, (3.2-7)x(57212) [im, arise mostly from branching clusters of hyphae. The thin-walled young metabasidia are slightly broader (Fig. 33OBI) than the hyphae bearing them and contain a denser cytoplasm. Six to eight ellipsoidal to ovoidal basidiospores, (6-9)x(10.5-16.5)|im, are formed directly from the expanded apex (Fig 330B2,C) of the basidia. Basidiospores produce blastoconidia (Fig. 330B3), which continue to bud profusely and form yeast colonies. Occasional isolates have been shown to produce a complete sexual state without mating. Karyogamy and meiosis occur in metabasidia. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w

-

+ + + + +

-

+ + V

+ +/w +/w +/w V

+ +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

s

V

-

+/s V

s + +/w + s

-

+/w +/w +

-

+

__

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate + D-Saccharate D-Glucuronate Creatinine L-Lysine Ethylamine 50% Glucose (w/w)yeast extract agar

+ +

-

V

+ +

Urease Nitrite Thiamine-free Growth at 35°C Growth at ?>TC

+

-

+

-

Co-Q: 10 (Sugiyama et al. 1985). MoI% G + C: Not determined.

Origin of the strains studied: Plume grass (Erianthus giganteus) (3); Hibiscus siriaca (2); Yucca {Yucca rupicola) (3). Complementary mating types: CBS 6241 (a) and CBS 6242 {a). Holotype: Herbarium material SC29 was designated as the type by Olive and deposited at the New York Botanical Garden in the Bronx, New York. Extype strain: CBS 6241, isolated from Hibiscus siriaca. Fig. 330. F. floriforme. (A) Yeast cells grown on malt extract for 3 days. Bar=10|im. (Bl) Young basidium. (B2) Mature basidium. (B3) Germinating basidiospore. (C) Seven basidiospores released from a single basidium. Bar= 10 |im.

Comments: Although the haploid state oi E floriforme is phenotypically similar to Cryptococcus albidus, the type strain and many other C. albidus strains, including

83. Filobasidium Olive / K.J. Kwon-Chung

every variety, failed to mate with a or a mating types of E floriforme. 83.4. Filobasidium globisporum Bandoni & Oberwinkler (Bandoni et al. 1991) Growth on 2% malt agar: The cells, (2.5-5.5x39)[i-m, multiply by budding, and are spheroidal to ellipsoidal or subcylindrical, occasionally with a small extension on one or both ends. The colonies are mucoid and grayish-white to cream in color. Life cycle: The sexual pattern of E globisporum has not been defined. Hyphae (2-3 |im in diameter) are thin walled with clamp connections and haustorial branches. Basidia are subtended by clamps and produced in dense white patches that are hymenium-like. Mature basidia (35-122 |im long) are 2.5-3.5 |im wide in the middle portion and expanded to 4-5.5 |im apically, and bear 3 5 basidiospores on coarse tubercles (Fig. 331). Some basidia produce 1-3 short lateral branches, which may be sporogenous or remain sterile (Fig. 331 A). Basidial walls are thicker immediately below the swollen apex, which shows coarse tubercles that mark the sites of spore attachment. Basidiospores are globose (6-8.5 |im in diameter) or apiculate-ovoidal or broadly ovoidal in side view (6-8.5 x 8-9 (im). Basidiospores germinate by budding. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + s s w + +/s s -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + s v s n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + D-Saccharate D-Glucuronate v Creatinine L-Lysine Ethylamine Starch formation + Co-Q: Not determined. Mol% G + C: Not determined.

Urease Nitrite Thiamine-free 0.01% Cycloheximide Growth at 2 5 T Growth at 3 7 T

+ +

Origin of the strains studied: CBS 7642, 7643, 7644, and 7645 were isolated from weathered leaf of Yucca

667

000 00 Fig. 331. F. globosporum. (A) Fertile hyphae with clamps, young basidia and basidiospores. (B) Mature basidia and basidiospores (Bandoni et al. 1991). Bars=10!J,m.

brevifolia collected 10 miles east of Gorman, Los Angeles County, California. Holotype: E globisporum on weathered leaves of Yucca brevifolia, collected 10 miles east of Gorman, Los Angeles County, California, was deposited at the herbarium. National Fungus Collection (BPI 1108721). Comments: Bandoni et al. (1991) described E globisporum on the basis of a fungus found on weathered leaves of Yucca brevifolia growing in California and Nevada. The anamorph of E globisporum is a budding, yeastlike fungus that produces mucoid colonies with grayish-white to cream color. The description of E globisporum is an excerpt from the original paper by Bandoni et al. (1991), and the assimilation profile was extracted from the CBS database. 83.5. Filobasidium uniguttulatum Kwon-Chung (1977b) Anamorph: Cryptococcus uniguttulatus (Zach) Phaff & Fell Synonyms: Eutorulopsis uniguttulata Zach (Wolfram & Zach 1934b) Cryptococcus uniguttulatus (Zach) Phaff & Fell (1970) Cryptococcus neoformans (Sanfelice) Vuillemin var. uniguttulatus (Zach) Lodder & Kreger-van Rij (1952)

Growth in 2% malt extract: After 3 days at 25°C, the haploid cells are globose to ovoidal, single, in pairs, or in small clusters, (3.0-5.5)x(3.5-7.0) |im, rarely up to 9|im long. A thin ring and a small amount of sediment may be present. After one month, there is a moderate ring and a moderate amount of sediment. Growth on 2% malt agar: Shape and size of the cells are similar to those grown in malt extract (Fig. 332A). After one month at 25°C, the streak culture is white to cream-colored with an entire margin. Colony texture is smooth, soft, and semiglossy. Dalmau plate culture on corn meal agar: Pseudoand true mycelium are not formed in the haploid phase. Life cycle: On V8 juice or hay infusion agar, cells

668

VIb. Descriptions of teleomorphic basidiomycetous genera and species

produce conjugation tubes, (1-5) x (1.5-20) |im, within 2 3 days after mixing of two compatible mating types. The conjugation tube is usually sinuous and narrower than the dikaryotic hyphae, which arise from the conjugated cells. The dikaryotic hyphae bear clamp connections at each septum. Within 7-10 days, mature metabasidia appear in the margin of mated cultures. Young metabasidia are thin-walled and broader than the hyphae from which they originate. They develop singly or in groups of two to four on the side of hyphae at the clamp or terminally on the hyphae (Fig. 332B). Blastospores are occasionally produced laterally on the hyphae. Metabasidia are elongated, (4-6)x(30-90)|im; they taper apically and expand abruptly to produce a globose apex (3-5 \km diameter) (Fig. 332D) with four to ten sessile terminal basidiospores (Fig. 332C). The basidiospores bud directly from the apex. The spores are ovoidal to kidney-shaped, (3-5) X (4-9) |im. Infrequently, haustorioid branches are produced from the clamp of the dikaryotic hyphae. The liberated basidiospores reproduce by budding and form yeast colonies. Although a detailed cytological study was not carried out, analysis of single basidiospores indicated that meiosis occurred in the metabasidium.

.^ 4^^J.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V + + +/w s + + V + +/w w/V -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Fig. 332. F. uniguttulatum. (A) Yeast cells grown on malt extract agar for 3 days. (B) Young basidia. (C) Mature basidia. (D) Basidia after the release of basidiospores. Bars=10^m. +/w s +/w s

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate D-Saccharate D-Glucuronate Creatinine L-Lysine Ethylamine 50% Glucose (w/w)yeast extract agar

+ + +/w -

Starch formation Urease Nitrite Thiamine-free SOT Growth at 30"C Growth at 3 5 T

+

Co-Q: 9 (Yamada and Kondo 1972a). Mor/o G + C: 51.5 {T^: Storck et al. 1969, Nakase and Komagata 1971c).

Origin of the strains studied: Five strains were from clinical specimens: CBS 1730 {a) and CBS 1727 (a) from diseased nails; CBS 2770 (a) from white spots

in the mouth; CBS 2994 (a) from a bronchus; and CBS 4257 (a) from sputum. Five strains were single basidiospore cultures obtained by crossing CBS 1730 and CBS 1727. Complementary mating types: CBS 1727 (a) and CBS 1730 {a). Type strain: CBS 1730. Comments: Yamada and Kondo (1972a) studied the Co-Q system of eight species and three varieties in the genus Cryptococcus. They found that, except for C. uniguttulatus, all had the Q-10 system. The known teleomorphs of species with the Q-10 system belonged either to Filobasidiella or Filobasidium. The coenzyme Q of C uniguttulatus, the anamorph of E uniguttulatum, however, was Q-9. The question remains whether the isolate that Yamada and Kondo studied produces the E uniguttulatum teleomorphic state. Although E uniguttulatum has been isolated from diseased nails (human) or other clinical specimens, it has not been documented to cause invasive disease. Comments on the genus Fell et al. (1969) described the sexual state of Candida

83. Filobasidium Oliue / K.J. Kwon-Chung

japonica {Candida capsuligena) as Leucosporidium capsuligenum. Basidiospores and basidia were not mentioned, but terminal teliospores connected to the hyphae by clamp connections were described. These were later found to be the initial stage of metabasidium formation. Rodrigues de Miranda (1972) observed the complete sexual life cycle of the species and redescribed the species as E capsuligenum. Physiologically, E capsuligenum differs from other members of the genus by the ability to ferment glucose and maltose. The extracellular amylolytic systems of E capsuligenum were studied in detail by De Mot and Verachtert (1985). The purified a-amylase (1,4-a-Dglucanglucanhydrolase) and two forms of glucoamylase (1,4-a-D-glucanglucohydrolase). The molecular weight of the a-amylase was 64 000, while that of glucoamylase was 60 000. The optimum temperature and pH for a-amylase are 50°C and 5.6, respectively. Although the two forms of glucoamylase had identical molecular weight, their optimum temperature and pH ranges were different. Ultrastructurally, E capsuligenum differs from E floriforme by having cone-shaped vesicular parenthesomes, while the latter species lacks the parenthesome (Moore and Kreger-van Rij 1972). Such parenthesomes were also observed in Tremella species (Khan 1976). E uniguttulatum differs form E floriforme by the inability to assimilate nitrate and lactose. Cryptococcus uniguttulatus, the asexual state of E uniguttulatum, was first described as Eutorulopsis uniguttulata by Zach (Wolfram and Zach 1934b). Lodder and Kreger-van Rij (1952) redescribed this yeast as Cryptococcus neoformans var. uniguttulatus on the basis of morphological and physiological similarities with C neoformans, but with reduced capsule formation. In 1961, Kreger-van Rij recognized that isolates of C neoformans assimilated galactitol as a sole carbon source and were able to grow at 37°C, whereas the variety was not able to do so. An

669

additional difference in creatinine utilization was found between the species and variety by Staib (1963). In 1970, Phaff and Fell reestablished the species status for the variety as C. uniguttulatus. With the discovery of the Eilobasidium state, it is now clear that C uniguttulatus is phylogenetically closer to Candida japonica and Cryptococcus albidus than to C neoformans. Physiological and morphological characteristics of C. albidus fit well with the asexual state of E floriforme; however, we failed to demonstrate successful mating between the type strains of the C. albidus varieties with the tester of E floriforme. The genus Eilobasidium can readily be separated from Eilobasidiella by differences in the morphology of their metabasidia. The intergeneric homology of 25S rRNA studied by relative binding of unlabeled 25 S rRNA from E capsuligenum and E uniguttulatum with a ^H-labeled cDNA probe of E neoformans showed a minimal difference of 16.11 relative binding% (Baharaeen and Vishniac 1984). The 18S and 25S rRNA sequence analysis supported such observations. Gueho et al. (1989) found differences in at least 32 positions within the region of 350 nucleotides in the 25S rRNA and 17 positions within the region of 332 nucleotides in the 18S rRNA. In 1991, Bandoni et al. described two new species of Eilobasidium, E elegans and E globisporum, both isolated from weathered inflorescences and leaf parts of several Yucca species collected in California, Nevada, and Texas. Bandoni et al. (1991) did not characterize the yeast phases of the species. The description of the two species indicated that they can be distinguished from the three previously known species by the shape and size of the basidiospores and the length of the basidia. Elucidation of their life cycle, biochemical characteristics of the yeast phase, and nucleotide sequence of rRNA are needed to understand the relationship of the two species with the remaining Eilobasidium species.

670

VIb. Descriptions of teleomorphic basidiomycetous genera and species

84. Leucosporidium Fell, Statzell, I.L. Hunter & Phaff A. Statzell-Tallman and J.W. Fell Diagnosis of the genus Growth on solid media is white to cream-colored, often mucoid. Visible carotenoid pigments are not present. Both yeast and mycelial phases may occur. Yeast phase cells are ovoidal to elongate and reproduce by budding; a pseudomycelium may form. The mycelial phase is characterized by true mycelium with or without clamp connections and the formation of terminal and intercalary teliospores. The septal structure is a simple pore. Ballistospores and ballistoconidia are not present. Sexual mechanisms, although not completely investigated, include unifactorial (bipolar) and bifactorial (tetrapolar) systems. In these heterothallic systems, a dikaryotic mycelium results from the conjugation of a compatible mating pair. A clamp connection is usually present at each cross wall. Intercalary and terminal teliospores develop. Karyogamy takes place in the teliospore (probasidium) which germinates to produce a metabasidium (promycelium) that is septate, usually with four cells (phragmometabasidium). Meiosis takes place during germination and the resulting haploid basidiospores are lateral and terminal on the phragmometabasidia. Teliospores can be produced, in the apparent absence of mating, by two mechanisms. Uninucleate yeast cells of L. antarcticum and L. scottii produce uninucleate teliospore-bearing hyphae that lack true clamp connections. In contrast, the uninucleate yeast cells of L. fellii are diploid, reduction division takes place with the formation of dikaryotic teliospore-bearing hyphae with clamp connections; karyogamy occurs in the teliospores, which germinate to a metabasidium with diploid basidiospores. Glucose is not fermented. Nitrate is assimilated. Diazonium blue B and urease reactions are positive. Myo-inositol is not assimilated. Starch-like compounds are not produced. Coenzymes Q-9 and Q-10 are present. Xylose is absent from cell hydrolyzates. Type species Leucosporidium scottii Fell, Statzell, I.L. Hunter & Phaff Species accepted 1. Leucosporidium antarcticum Fell, Statzell, I.L. Hunter & Phaff (1969) 2. Leucosporidium fellii Gimenez-Jurado & van Uden (1989) ?>. Leucosporidium scottii Fell, Statzell, I.L. Hunter & Phaff (1969) Key to the teliospore-forming wliite yeasts See Table 69. 1. 2(1). 3(1). 4(3). 5(4).

a b a b a b a b a b

Glucose fermented -^ 2 Glucose not fermented —» 3 Nitrate assimilated Nitrate not assimilated Melezitose assimilated Melezitose not assimilated -^ 4 L-Rhamnose assimilated L-Rhamnose not assimilated -^ 5 Nitrate assimilated Nitrate not assimilated

Mrakia frigida: p. 676 Cystofilobasidium lari-marini: p. 652 L. scottii: p. 673 L. fellii:

L. antarcticum: p. 671 Rhodotorula fujisanensis: p. 812 Table 69 Key characters of the teliospore-forming white yeasts

Species

Glucose fermentation

Assimilation Melezitose

L-Rhamnose

Nitrate

Cystofilobasidium lari-marin i

+

+

V

-

Leucosporidium antarcticum

-

-

+

+

+

L. scottii

-

+

+

+

Mrakia frigida

+

V

V

+

Rhodotorula fufisanensis

-

-

-

-

L. fellii

p. 671

671

84. Leucosporidium Fell, Statzell, I.L. Hunter & Phaff / A. Statzell-Tallman and J. W Fell

Systematic discussion of the species

self-sporulating, nor heterothallic strains of L. antarcticum mated with strains of other Leucosporidium species. 84.1. Leucosporidium antarcticum Fell, Statzell, I.L. Fermentation: absent. Hunter & Phaff (1969) Growth in 5% malt extract: After 3 days at 12°C, Assimilation: Glucose + A/^-Acetyl-D-glucosamine the cells of self-sporulating strains are ovoidal, {2-A) x (5- Galactose v Methanol 22) ^im; haploid, heterothallic cells tend to be shorter L-Sorbose Ethanol v and wider and are (3-6)x(3-10)|im. Both types of cells Sucrose v Glycerol +/w v Erythritol are single, in pairs and short chains. There is a light Maltose Ribitol sediment. After one month there is a light ring and a heavy Cellobiose Trehalose v Galactitol sediment. Lactose D-Mannitol v Growth on 5% malt agar: After 3 days at 12°C, the cells are approximately the same size as in malt extract. The cells may have a large capsule and refractile inclusions. Growth is cream-colored, smooth, mucoid, runny and glistening; the border is entire. Pseudo- and true mycelium may be present. There is little change after one month.

Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

v V -

D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s + +

Dalmau plate culture on corn meal agar: Selfsporulating strains have two types of mycelium: short branched chains of pseudomycelium and long branched Additional assimilation tests and other growth chains of true mycelium. After 3 weeks of growth, characteristics: Starch formation 2-Keto-D-gluconate + teliospores develop on the true mycelium and measure 5-Keto-D-gluconate Urease + (4-6) X (5-8) |im; they occur terminally, singly and oc- Saccharate Gelatin liquefaction + Growth at IT^'C casionally in pairs. The teliospores increase in size and D-Glucuronate w Growth at WC at 7 weeks are (5-8)x(5-10)|im, terminal, intercalary, 50% (w/w) Glucosesingle and in short chains of two to three. The teliospores yeast extract agar 10% NaCl/5% glucose usually have one or two bud-like structures that may Co-Q: 10 (Yamada and Kondo 1972a). represent either vestigial clamp connections or undevel- Mol% G + C: 50.5 {T^: Sugiyama et al. 1985). oped sister teliospores. Heterothallic strains form true and Cell hydrolyzates: Not determined. pseudomycelium. Origin of the strains studied: Antarctic marine waters Life cycle: Self-sporulating strains: septate uninucleate at water temperatures less than 2°C in regions of pack hyphae with teliospores, lacking clamp connections, ice adjacent to the Antarctic continent at several locations develop directly from single cells in the absence of mating. near the northern tip of the Antarctic Peninsula and at one Teliospores from a culture grown on corn meal agar at location (150°E and 64°S) in the Indo-Pacific (46) (Fell S'^C, germinated on 2% agar after soaking in distilled et al. 1969, Fell 1976). The majority of the isolations were water. The highest number of germinating teliospores made at water depths of 100 m or less, however isolates occurred after 3 months; duration of the individual steps were obtained from depths of 3000 m. Complementary mating types: CBS 7054 (Fell varied. For example, growth on corn meal agar for 2 weeks strain 38-22, mating type Al), collected March, 1966 at followed by soaking for 10 weeks or growth for 10 weeks 64°16'S, 150^06'E at a water depth of 152 m. CBS 7009 with soaking for 2 weeks. Germination then occurred (Fell strain 38-107, mating type A2), was obtained August, within one week on 2% agar. When the various steps 1966 from 64°10'S and 150°03'E at a water depth of 4 m. were performed at S'^C, the cells produced less interfering Type strain: CBS 5942 (Fell strain AR 372), a selfpolysaccharides than at 12°C. The metabasidium was foursporulating strain isolated August, 1966 in the Weddell celled with lateral and terminal basidiospores. Ploidy of Sea near Joinville Island, Antarctica. the basidiospores has not been determined. Heterothallism: compatible mating strains Al and A2 mixed on corn meal agar formed spherical to ovoidal, (7- 84.2. Leucosporidium fellii Gimenez-Jurado & van Uden (1989) 10)x(8-13)|im, teliospores on clamp-bearing mycelium Growth in 5% malt extract: After 3 days at 19T, after 3 weeks at 12°C. Teliospore germination occurred the cells are ovoidal to elongate and obpyriform, (2.7after soaking 2-month-old teliospores in distilled water 4.0)x(8-12.7)jim; they occur singly or in pairs, and for one month followed by one week on 2% agar. Basidiospores developed laterally and terminally on four-celled reproduction is by budding. A slight sediment is present. metabasidia. Six basidiospores from two teliospores were Growth on 5% malt agar: After one month at 19°C, the examined and all progeny were self-sporulating. Neither streak culture is white to cream-colored, flat, pasty with

VIb. Descriptions of teleomorphic basidiomycetous genera and species

672

a fringe of true mycelium bearing complete clamps and teliospores which are predominately spherical. Dalmau plate culture on corn meal agar: After one week at 19°C, mycelium develops with complete and incomplete clamp connections. Intercalary and terminal teliospores form that are spherical, clavate or obpyriform, (8.4-15) X (11.7-15) fim. Life cycle: The species is homothallic; uninucleate cells develop into a dikaryotic mycelium with complete clamp connections at some, but not all of the septa. Karyogamy appears to take place in the teliospore. The teliospores germinate following 8 weeks of growth and incubation at 19°C on com meal agar. The metabasidia are club-shaped, 3-8 \xm in width and 2 5 ^ 5 \im in length with 2-A cells. The basidiospores are produced on a swollen pedicel that is terminal on the distal cell and lateral on the remaining cells (Fig. 333). The basidiospores have a bacillary shape, measure (0.8-1.3)x(1.7-5.8)(im, and occur in clusters of up to six in number. Fermentation: absent.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

s ws

-

+ + +

s

s

-

+ +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+

-

+ +

-

+ + w w w

-

+ +

Fig. 333. L. fellii, CBS 7287. Cells were grown for two months on com meal agar at 19°C; the resulting teliospore germinated to a phragmometabasidium with clusters of lateral and terminal basidiospores on swollen pedicels. Bar= 10 |im.

Additional assimilation tests and other characteristics:

growth

n Starch formation 2-Keto-D-gluconate n Urease 5-Keto-D-gluconate Sodium nitrite Saccharate Gelatin liquefaction + D-Glucuronate + Glucono-6-lactone Arbutin + L(+)-Tartaric acid Cadaverine Malic acid Creatine 0.1% Cycloheximide Creatinine + Growth at 19°C L-Lysine Growth at 25T Ethylamine hydrochloride + Growth at 3>Q°C 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose w Co-Q: 10 (Gimenez-Jurado and van Uden 1989). MoI% G + C: 57.7 {T^: Gimenez-Jurado and van Uden 1989). Cell hydrolyzates: Not determined.

-

+ +

-

+ + + + + +

-

Origin of the strain examined: CBS 7287 isolated from soil collected near Oeiras, Portugal in January 1987. Type strain: CBS 7287 (Gimenez-Jurado and van Uden, I.G.C. 4403). Comments: L. fellii was isolated on a selective L(+)-tartaric acid medium. L(+)-Tartaric acid is the predominant organic acid in grape must and wine and few yeasts have been found to assimilate that organic acid (Fernandez and Ruiz-Amil 1965, Gimenez-Jurado and van Uden 1989). The original description reported lactose and sucrose assimilation to be negative, which differs from our results. Gimenez-Jurado and van Uden (1989) reported that the life cycle of L. fellii was homothallic; they presumed that the dikaryotic mycelial phase arose from the conjugation of single cells. We examined the life cycle by isolating 26 basidiospores representing progeny from seven teliospores. Based on nuclear staining (modification of Robinow 1961) the basidiospores are uninucleate and germinate to dikaryotic hyphae with complete clamp connections; the teliospores and metabasidia are uninucleate. Mating was not observed prior to teliospore formation. This type of life cycle is present in other basidiomycetous yeasts, specifically in Sporidiobolus johnsonii, Sporidiobolus ruineniae and Rhodosporidium toruloides. According to Gimenez-Jurado and van Uden (1989) "... teliospores germinate giving rise to a metabasidium which may form two or more externally located basidiospores . . . " . This type of basidial formation is typical of the genera Leucosporidium, Rhodosporidium and Sporidiobolus, and usually results in spheroidal to ovoid basidiospores, one to two per metabasidial cell. In contrast, we observed that L. fellii produced bacillary basidiospores on a swollen pedicel in whorls of six per metabasidial cell. This type of basidiospore formation is unique among the basidiomycetous yeasts although it does resemble the clusters of basidiospores depicted for Ustilago domesticus, U. bistortarum and U. lagerheimii (Fischer and Holton 1957, p. 174). This formation is probably a species-specific (rather than a

84. Leucosporidium Fell, Statzell, I.L. Hunter & Phaff / A. Statzell-Tallman and J. W Fell

^(Qc^

673

HETEROTHALLIC ^ ^ ; ^ C X r MATING TYPES MATING

MONOKARYOTIC MYCELIUM

/HAPLOIDN

\ BUDDING /

/i/

Bl^

A2 82^

I Al B2., A2 Bl

V

CONJUGATION

TELIOSPORE WITH BUD-LIKE PROJECTION 7

METABASIDIUM

DIKARYOTIC MYCELIUM FORMATION

^

GERMINATION

\

GERMINATION AND MEIOSIS ENDOSPORES

TELIOSPORE y FORMATION AND KARYOGAMY Fig. 334. L. scottii. Schematic drawing of the Hfe cycle (Fell et al. 1969).

generic) characteristic among the yeasts as L. fellii appears to be closely related to L. scottii based on partial rRNA nucleotide sequence alignments (Fell and Kurtzman 1990). 84.3. Leucosporidium scottii Fell, Statzell, I.L. Hunter & Phaff (1969) Anamorph: Candida scottii Diddens & Lodder Synonyms: Candida scottii Diddens & Lodder (1942) Azymocandida scottii (Diddens & Lodder) Novak & Zsolt (1961) Vanrija scottii (Diddens & Lodder) R.T. Moore (1980) Apiotrichum eucryphiae Ramirez & Gonzalez (1984d)

Growth in 5% malt extract: After 3 days at 25°C, cells are ovoidal to elongate, (l-7)x(4-16)jim, usually single or in pairs. Reproduction is by apical budding. Strands of pseudomycelium are present. Sediment is moderate. After one month there is a ring, some small islets and a heavy sediment. Growth on 5% malt agar: After 3 days at 25°C, the cells are ovoidal to elongate, (l-4)x(3-12)|im. Some strands of true and pseudomycelium are evident. After one month the growth is cream-colored, extremely mucoid with dense, extensive mycelium at the periphery. Dalmau plate culture on corn meal agar: After 3-5 days at room temperature, pseudomycelium of the 'Candida' type begins to form. After one month, the pseudomycelium bears large clusters of blastoconidia. True mycelium with endospores is also present. Selfsporulating strains lack clamps on the teliospore-bearing hyphae.

Life cycle (Fig. 334): L. scottii has a multiple allelic bifactorial sexual incompatibility system. The mating competency is controlled by two factors designated A and B, which results in a minimum of four mating types: AlBl, A2B2, A1B2, A2BL Present information suggests that each of the factors consists of two linked loci, designated a and (3, which are separable by crossing over, i.e., a cross of ^aiPi strain with A(i2fi2 strain can result in recombinant progeny Aa\^2 and Aa2^\. Five A and three B factors have been identified (Fell and StatzellTallman 1982). When compatible strains are mixed on corn meal agar at 25°C, they conjugate within 30 hours at a frequency of less than 1%. A binucleate hypha develops from one of the conjugate cells. After 72 hours, the hyphae develop extensively with clamp connections at each septum. After 4-7 days intercalary and terminal teliospores develop with one or more clamp structures between the spore and hypha. The teliospores are spherical, thick-walled, have a granular content and range in size from (7-15)x(7-16)|im. Karyogamy in the teliospores precedes germination. After 5 days, the teliospore (Fig. 335) germinates and the diploid nucleus migrates into the metabasidium. Meiosis occurs in the metabasidium, which partitions into four cells. Each metabasidial cell contains one nucleus, which reproduces mitotically, resulting in one nucleus in the cell and one in the developing basidiospore. Basidiospores form near the septa and terminally on the distal metabasidial cell. Budding of the basidiospores results in mucoid yeast cells that represent either parental mating types or selfsporulating strains.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

674

Additional assimilation tests and other characteristics:

growth

2-Keto-D-gluconate + Starch formation 5 -Keto-D-gluconate + Urease + Gelatin liquefaction Saccharate V + D-Glucuronate Growth at SOT + + 50% (w/w) GlucoseGrowth at 3>TC yeast extract agar 10% NaCl/5% glucose + Co-Q: 9 and 10 (Yamada and Matsumoto 1988a); 8, 9 and 10 as minor subunits (Yamada and Nakagawa 1990); 9 (CBS 5931) and 10 (CBS 614) (Sugiyama et al. 1985, Yamada and Kondo 1972a). Mol% G + C: 60.9, 61.1 {T^: Gimenez-Jurado and van Uden 1989). Cell hydrolyzates: Glucose, mannose and galactose (Gorin and Spencer 1970). Fig. 335. L. scottii, CBS 5930xCBS 5931. Cells of opposite mating types were mixed on corn meal agar and incubated at 25°C for 5 days; the resulting teliospores germinated to a four-celled metabasidium with lateral basidiospores. Bar= 10 (im.

Some strains are capable of monokaryotic formation of teliospores: a hypha with uninucleate cells develops from a uninucleate yeast cell. The hyphae do not have clamp connections, although incomplete clamp-like structures may be present. Monokaryotic fruiters will mate with heterothallic mating strains resulting in binucleate clamped hyphae with teliospores. Progeny of matings of monokaryotic X heterothallic strains are 50% heterothallic fruiters and 50% monokaryotic fruiters. Similar results have been obtained with heterothallic x heterothallic fruiters. This segregation suggests that there are one or more separate genes for fruiting that may be repressed in some heterothallic strains. This gene may not be associated with a specific mating type as suggested by the mating of monokaryotic ^557 x heterothallic A2B2 -^ heterothallic A3B1 progeny (Fell and Statzell-Tallman 1982). Strains of L. scottii do not mate with strains of other species in the genus. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+ + + w + V

-

+ +

-

+

V V V

+ +

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

V V

+ + + + +

-

+ +

Origin of the strains studied: 65 strains were examined: Southern Pacific Ocean (59) (Fell 1976); Antarctic soil and seawater strains fi^om di Menna (3); soil in Australia (1) (Lodder and Kreger-van Rij 1952); unreported sources (2). Complementary mating types: CBS 6562 (AIB2) and CBS 6561 {A2B1) are progeny from AlBlxA2B2 matings (Fell 1974). CBS 5932 (a self-sporulating strain) was collected August 1966 at 13r53'W, 3 r 5 9 ' S fi-om Antarctic seawater at a water depth of 155 m, temperature of 2.59°C and salinity of 34.61%o. Type strain: CBS 5930 (mating type A2B2) collected August 1966 from Antarctic seawater at 129°59'W, 4 r 5 8 ' S at a water depth of 1364m, temperature of 3.0°C, salinity of 34.44%o. Allotype: CBS 5931 (mating typQAlBl) was collected August 1966 from Antarctic seawater (134°30'W, 36°00'S) at a water depth of 1902 m, temperature of 2.3''C and salinity of 34.62%o. Comments: L. scottii inhabits low temperature environments, generally in polar regions or in temperate regions during the cold weather seasons. There have been no reports from tropical or sub-tropical environments. Summerbell (1983) reviewed the ecology of Z. scottii and recorded the various isolation sources. These included soil and frozen beef from Australia (Scott 1936); apple fruit in Canada (Clark et al. 1954), soil in New Zealand (di Menna 1955a,b, 1958a, 1960, 1965a); grapevines in South Africa (Van Zyl and du Plessis 1961); plant blossoms in Czechoslovakia (Kockova-Kratochvilova 1964); wild mushroom in Czechoslovakia (Kockova-Kratochvilova et al. 1965); soil and grapes in New Zealand (Parle and di Menna 1966); polluted rivers in the northern United States (Woollett and Hedrick 1970), Quebec (Simard and Blackwood 1971) and France (Hinzelin and Lectard 1978); marine fish in Scotland (Bruce and Morris 1973); Antarctic soils (di Menna 1960, 1966b); Antarctic seas (Fell et al. 1969, Fell 1974); Antarctic mosses and saline lakes (Goto et al. 1969); soils in East Greenland (di Menna 1966b); Soviet Arctic tundra soils (Bab'eva et al. 1976, Bab'eva and Azieva 1980). Summerbell (1983) isolated L scottii in southern British Columbia,

84. Leucosporidium Fell, Statzell, I.L. Hunter & Phaff / A. Statzell-Tallman and J. W Fell

Canada from snow and decomposing plant materials in terrestrial locations, foam, living and decomposing plant material in fresh water and plants and driftwood in marine locales. Yamada and Nakagawa (1990) examined the coenzyme Q systems and partial nucleotide sequences of the SSU and LSU rRNA of 19 strains of L scottii. They found one strain IFO 9474 (UBC 670 from Bandoni) with Co-Q 7 and a sequence which differed from the other L. scottii strains - apparently this strain is a distinct species from L. scottii. The remaining strains were either Co-Q 9 or Co-Q 10. Eight strains had Co-Q 9 as the major component; three of these strains were isolated by Fell et al. (1969) from Antarctic sea water, the remaining 5 strains were progeny isolated from conjugants that included those marine strains (Fell and Statzell-Tallman 1982). The Co-Q 10 containing strains were isolated either from terrestrial sources or from temperate marine regions. Nucleotide sequence alignments of rRNA from Co-Q 9 and Co-Q 10 containing strains indicated a single species (Yamada and Nakagawa 1990, Fell and Kurtzman 1990).

675

Comments on the genus Based on septal morphology, polysaccharide composition of the cell hydrolyzates and molecular phylogeny (see Moore, Chapter 5, Kurtzman and Blanz, Chapter 10, and Boekhout et al.. Chapter 74, this volume), Leucosporidium is a teliospore-forming member of the Sporidiales. Three species are included in the genus, all have white to creamcolored colonies and appear to have low optimal growth temperatures. Two of the species (L. antarcticum and L scottii) have been isolated from polar and other cold temperature regions. The species differ in their methods of teliospore formation: self-sporulation, homothallic uniand bi-allelic systems; however in all cases a phragmometabasidium with basidiospores is formed. L. fellii produces distinctive basidiospores: bacillary basidiospores on a swollen pedicel in whorls of six per metabasidial cell (see Fig. 333). The Leucosporidium species can be separated from each other and from other teliosporeforming yeasts by standard fermentation and assimilation tests (Table 69).

676

VIb. Descriptions of teleomorphic basidiomycetous genera and species

85. Mrakia Y. Yamada & Komagata J.W. Fell and A. Statzell-Tallman Diagnosis of the genus Growth on solid media is white to cream-colored, often mucoid. Visible carotenoid pigments are not present. Both yeast and mycelial phases occur. In the yeast phase, the cells are ovoid to elongate and reproduce by budding; a pseudomycelium may form. Formation of the mycelial phase occurs in the absence of mating. Teliospores are produced terminally or intercalarily on the mycelium. Yeast cells are uninucleate and produce uninucleate teliospore-bearing hyphae without clamp connections. Teliospore germination results in phragmo- or holometabasidia. Ballistoconidia are not present in either the yeast or mycelial phase. The septal pore is a dolipore without a parenthesome. Glucose is fermented. Nitrate is assimilated. A/y^-inositol is not assimilated. Maximum temperature for growth is below 20'^C. Xylose is present in cell hydrolyzates. Starch-like compounds are produced. Diazonium blue B and urease reactions are positive. Coenzyme Q-8 system is present. Type species Mrakia frigida (Fell, Statzell, I.L. Hunter & Phaff) Y. Yamada & Komagata Species accepted 1. Mrakia frigida (Fell, Statzell, I.L. Hunter & Phaff) Y Yamada & Komagata (1987) Systematic discussion of the species 85.1. Mrakia frigida (Fell, Statzell, I.L. Hunter & Phaff) Y. Yamada & Komagata (1987) Synonyms: Leucosporidium frigidum Fell, Statzell, I.L. Hunter & Phaff (1969) Candida frigida di Menna (1966a) Vanrija frigida (di Menna) R.T. Moore (1980) Leucosporidium gelidum Fell, Statzell, I.L. Hunter & Phaff (1969) Mrakia gelida (Fell, Statzell, I.L. Hunter & Phaff) Y. Yamada & Komagata (1987) Candida gelida di Menna (1966a) Vanrija gelida (di Menna) R.T. Moore (1980) Leucosporidium nivalis Fell, Statzell, I.L. Hunter & Phaff (1969) Mrakia nivalis (Fell, Statzell, I.L. Hunter & Phaff) Y. Yamada & Komagata (1987) Candida nivalis di Menna (1966a) Vanrija nivalis (di Menna) R.T. Moore (1980) Leucosporidium stokesii Fell, Statzell, I.L. Hunter & Phaff (1969) Mrakia stokesii (Fell, Statzell, I.L. Hunter & Phaff) Y. Yamada & Komagata (1987) Candida curiosa Komagata & Nakase (1965) Cryptococcus curiosus (Komagata & Nakase) Rodrigues de Miranda & Weijman (Weijman et al. 1988)

Growth in 5% malt extract: After 3 days at 12°C, the cells are short-ovoidal to ovoidal-elongate, (2.6-8.0)x ( 3 14) |im, and occur singly or in pairs. Occasionally septate cells are observed. A sediment is formed and sometimes a slight ring. After one month, a ring, which may be thick and myceliated, and a light to heavy sediment may be present. Growth on 5% malt agar: After one month at 12°C, the streak culture is cream-, yellowish-white to light brownish-gray, raised, dull, mucoid and smooth or wrinkled. The margin may be fringed with true mycelium bearing ovoid to ovoid-elongate teliospores but

no clamp connections. The teliospores may be intercalary or terminal and spherical (5-8 jim in diameter) or elongate (5.4-11.9)x(6.5-13.5)^im. Dalmau plate culture on corn meal agar: After one week, pseudo- and true mycelium are abundantly developed. Blastoconidia are short-ovoid to ovoid and occur singly, in chains, in clusters or in verticils. Teliospores form occasionally or abundantly, usually in greater numbers after 3 weeks when they are smaller in size, (3-7) X (4-8) [im, as compared to their larger size at 9 weeks, (4-ll)x(5-16)|im. Life cycle: Mycelium and teliospores develop directly from a single cell and no clamp connections form. Nuclear stains indicate that the mycelium is uninucleate. Teliospores may germinate to a one to three celled metabasidium, 8-12 [im long (Fig. 336). Germination has not been observed in all strains. Teliospores of certain strains germinate in response to different regimes of varied temperatures (5''C-12°C) and time of growth on corn meal agar or 2% glucose Sabouraud agar, soaking in distilled water and streaking on 2% agar devoid of added nutrients. Basidiospores are terminal and/or lateral (Fig. 336).

Fermentation: Glucose Galactose Sucrose Maltose Lactose Raffinose

s V V V

V

Trehalose Melezitose Inulin Melibiose Cellobiose

85. Mrakia Y. Yamada & Komagata / J.W. Fell and A. Statzell-Tallman

677

samples was plant material such as mosses, lichens and algae. Di Menna's strains, used as type strains in the description of Leucosporidium spp., were: 5A1 (CBS 5270) Lfrigidum; 2AH10 (CBS 5272) L gelidum; 2AH2 (CBS 5266) L nivalis. Sinclair and Stokes (1965) isolated a strain (P-16, CBS 5917), from an Antarctic snow core, which was described as L. stokesii. Komagata and Nakase (1965) isolated two strains, P-6 (CBS 5688) and P-13, from frozen food (Sillago japonicd) in Kawasaki, Japan, 1963, which the authors described as Candida curiosa. M. Parish (Univ. Florida) obtained a strain from orange juice in cold storage (5°C) in Florida. Type strain: CBS 5270, isolated from soil at Scott Base, Antarctica, by M. di Menna. Fig. 336. M. frigida, NRRL Y-7203. After 5 weeks on com meal agar at XT'C followed by 7 weeks in distilled water, teliospore germination with terminal basidiospores on a one-celled metabasidium occurred on 2% agar after 2 weeks. Bar= 10 |im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V s + V + s V V + V V s + V V V s

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Urease 5-Keto-D-gluconate + Gelatin liquefaction Saccharate v Biotin-free D-Glucuronate s Thiamine-free 50% (w/w) GlucoseGrowth at \TC +/w yeast extract agar Growth at 19"C 10% NaCl/5% glucose Growth at 25''C Starch formation + Co-Q: 8 (Yamada and Kondo 1972a). Mol% G + C: 54.1, M. frigida {T^\ Nakase and Komagata 1971f); 56.1, M. gelida (T^: Nakase and Komagata 197If); 52.9, CBS 5688, Candida curiosa {T^: Meyer et al. 1984). Cell hydrolyzates: Xylose present (Sugiyama et al. 1985).

Origin of the strains studied: Di Menna (1966b) obtained approximately 80 isolates from Antarctic soil samples collected in the vicinity of Campbell-Mawson, Mawson-Koettlitz, Beardmore-Nimrod, Shackelton-Axel Heiberg Glaciers and from Scott Base. She also obtained 20 isolates from Greenland soil samples near Mastersvig airstrip. The common constituent of the Greenland

Comments on the genus Di Menna (1966a,b) isolated a group of low temperature yeasts from Antarctic and Greenland soil samples and described several species of Candida: C. frigida, C gelida and C. nivalis based on differences in assimilation patterns. These species were placed in the genus Leucosporidium due to the observation of teliospore formation, which was a result of self-sporulation. The species were retained as separate Leucosporidium species, based on physiological properties as per di Menna's recommendations. Yamada and Komagata (1987) studied the Co-Q system of the genus Leucosporidium and found that the original di Menna species, and L. stokesii, differed from other members of Leucosporidium, by the presence of the Co-Q 8 system. Sugiyama et al. (1985) reported the presence of xylose in the cell hydrolyzates of these species; in contrast, xylose is absent in other species of Leucosporidium. Based on these differences Yamada and Komagata (1987) created the genus Mrakia consisting of four species that they transferred from Leucosporidium. Yamada and Matsumoto (1988a) examined the electrophoretic pattern of 7 enzymes of strains of Mrakia spp. and concluded that M. nivalis was a synonym of M. frigida and that M. stokesii was a synonym of M. gelida. Molecular sequence analysis (Yamada and Kawasaki 1989a, Fell et al. 1992) suggests that all four nomenclatural strains represented a single species, M. frigida. We also include Candida curiosa in the list of synonyms. Van Uden and Buckley (1970) recognized the synonymy of C curiosa and C nivalis based on physiological properties. Because teliospores had not been observed in C. curiosa, the species was retained in Candida (Meyer et al. 1984) and subsequently transferred to Cryptococcus as C curiosus (Weijman et al. 1988). During the examination of C. curiosus for the present treatise, we were able to induce teliospore formation by incubating a culture on 2% dextrose Sabouraud agar at 12°C to confirm the synonymy recommended by van Uden and Buckley (1970).

678

VIb. Descriptions of teleomorphic basidiomycetous genera and species

86. Rhodosporidium

Banno

J.W. Fell and A. Statzell-Tallman Diagnosis of the genus Colony color on solid media includes shades of yellow, orange and red due to the presence of carotenoid pigments. Yeast and mycelial phases may occur. In the yeast phase the cells are ovoid to elongate and reproduce by budding; a pseudomycelium may form. Formation of the mycelial phase can result from sexual reproduction and may develop by two methods of self-sporulation. True mycelium with or without clamp connections is formed. The septal structure consists of a simple pore. Teliospores may be terminal, lateral on stalks or intercalary on the mycelium. Sexual mechanisms, although not completely understood, are both homothallic and heterothallic. Heterothallism includes unifactorial biallelic (e.g., R. toruloides) and bifactorial {R. dacryoideum) systems. In these heterothallic systems a dikaryotic mycelium results from the conjugation of a compatible mating pair. A clamp connection is usually present at each cross wall. Intercalary and terminal teliospores develop. Karyogamy takes place in the teliospore (probasidium), which germinates to produce a two to four celled, septate metabasidium (phragmometabasidium). Meiosis takes place during germination and the resulting haploid basidiospores are lateral and terminal on the phragmometabasidium. Homothallism, or self-fertility, consists of the development of hyphae with teliospores from a single yeast cell in the apparent absence of mating. The yeast phase is diploid and reduction division takes place with the formation of a dikaryotic mycelium with clamp connections. Karyogamy occurs in the teliospore. Germination of the teliospore results in a metabasidium with diploid basidiospores (strains of R. dacryoideum and R. toruloides). In contrast to the homothallic life cycle, the hyphal cells of some self-sporulating species (e.g., R. fluviale and R. kratochvilouae) remain uninucleate and clamp connections are lacking. Teliospore formation has not been studied in detail, although the process may be monokaryotic fruiting rather than a sexual cycle. Neither ballistospores nor ballistoconidia are present in any of the phases. Sugars are not fermented. Diazonium blue B and urease reactions are positive. Extracellular starch is not produced. Among the species currently included in the genus, none assimilate lactose, melibiose, D-glucosamine, erythritol, or inositol. Galactose, trehalose and glycerol are assimilated. Xylose is absent in the cells. Coenzymes Q-9 and Q-10 are present. Type species Rhodosporidium toruloides Banno Species accepted 1. Rhodosporidium habjeuae Golubev (1993) 2. Rhodosporidium dacryoideum Fell, I.L. Hunter & Tallman (1973) 3. Rhodosporidium diobouatum Newell & I.L. Hunter (1970) 4. RhodosporidiumfluvialeFell, Kurtzman, Tallman & Buck (1988) 5. Rhodosporidium kratochvilouae Hamamoto, Sugiyama & Komagata (1988) 6. Rhodosporidium lusitaniae A. Fonseca & Sampaio (1992) 7. Rhodosporidium malvinellum Fell & I.L. Hunter (1970) S. Rhodosporidium paludigenum Fell & Statzell-Tallman (1980) 9. Rhodosporidium sphaerocarpum Newell & Fell (1970) \0. Rhodosporidium toruloides Banno (1967) Key to species See Table 70. 1. 2(1). 3(2). 4(3). 5(4). 6(5).

a b a b a b a b a b a b

Ballistoconidia formed Ballistoconidia not formed -^ 2 Inositol utilized, extracellular starch produced Inositol not utilized, extracellular starch not produced Teliospores formed by mating -> 4 Teliospores not formed by mating -^ 10 Teliospores markedly angular Teliospores not markedly angular -^ 5 Nitrate assimilated —> 6 Nitrate not assimilated Melezitose assimilated -^ 7 Melezitose not assimilated —^ 9

Sporidiobolus spp:

p. 693

Cystofilobasidium spp:

p. 646

-^ 3 R. toruloides: p. 690 R. dacryoideum: p. 680

86. Rhodosporidium Banno / J.W. Fell and A. Statzell-Tallman 7(6).

a b 8(7). a b 9(6). a b 10(3). a b 11(10). a b 12(11). a b 13(12). a b 14(13). a b

679

Teliospores diobovate or diclavate Teliospores globose to subglobose -^ 8 L-Arabinose assimilated L-Arabinose not assimilated Colony color salmon-orange Colony color white to mauve Teliospores highly angular Teliospores not highly angular -^ 11 Nitrate assimilated -^ 12 Nitrate not assimilated Melezitose assimilated -^ 13 Melezitose not assimilated Growth in vitamin-free medium -^ 14 Growth absent in vitamin-free medium Galactitol assimilated Galactitol not assimilated

R. diobouatum: p. 682 R. sphaerocarpum: R. babjeuae: R. paludigenum: R. maluinellum: R. toruloides:

p. 688 p. 679 p. 687 p. 686 p. 690

R. dacryoideum: p. 680 R. lusitaniae: p. 685 R. sphaerocarpum: p. 688 R. fluviale: p. 683 R. kratochuilouae: p. 684

Table 70 Key characters of species in the genus Rhodosporidium Species

Rhodosporidium babjeuae R. dacryoideum R. diobouatum R.fluuiale R. kratochuilouae R. lusitaniae R. maluinellum R. paludigenum R. sphaerocarpum R. toruloides

Teliospore formation

Colony color

HM or SS"

Heterothallic

Shape"

SS SS SS HM SS HM

+ + + + + + +

glo dac dio glo glo glo sub glo glo ang

red red-orange coral-red scarlet-orange peach-orange peach white to mauve salmon-orange orange scarlet-orange

Assimilation'^

Growth in

Mz

L-Ar

Gal

NO3

vitamin-free medium

+ y + + + + +

+ + + s v s + +

v + v + -

+ + + + + + + + +

s + + + + + +

^ Abbreviations: HM, homothallic; SS, self-sporulating formation of teliospores. ^ Abbreviations: glo, globose; dac, dacryoid; dio, diobovate; ang, angular. ^ Abbreviations: Mz, melezitose; L-Ar, L-arabinose; Gal, galactitol; NO3, nitrate.

Systematic discussion of the species

for 3 days, teliospores germinate to produce 1 or 2-celled metabasidia with 1 to 3 terminal ovoid basidiospores (Figs. 337, 338). R. babjevae does not mate with other species included in the genus Rhodosporidium, or with the type strain of Rhodotorula glutinis.

86.1. Rhodosporidium babjevae Golubev (1993) Growth in glucose-yeast extract-peptone water: After 3 days at 25*^0, the cells are spheroidal to ovoidal (the width/length ratios are fi"om 1.0 to 2.0), (2.56.0) X (4.2-8.5) |im, with small capsules, and single or in Fermentation: absent. pairs. After one month, a sediment, a ring and also islets or a pellicle sometimes form. Assimilation: + Growth on yeast morphology agar: After one month, Glucose + the streak cultures are red, smooth, glistening, mucoid or Galactose L-Sorbose s soft; the margin is entire to undulating. Sucrose + Slide cultures on corn meal agar: After 10 days, Maltose + neither pseudomycelium nor true mycelium is produced. Cellobiose +/w + Short lengths of true hyphae without clamp connections Trehalose may be present on month-old cultures. No ballistoconidia Lactose Melibiose are observed. Raffinose + Life cycle: Conjugation of mating types on corn meal Melezitose + agar at 20°C, results in the formation of true mycelium Inulin w/with clamp connections at the septa. Two mating types Soluble starch w w/were found (Golubev 1993, Bab'eva and Kartintsev D-Xylose L-Arabinose 1974), which suggests a unifactorial mating system. D-Arabinose s The teliospores are subglobose, globose (6.0-12.8) x (7.6- D-Ribose ws 13.6) |im, usually single, terminal, thick-walled, and gran- L-Rhamnose s ular. After soaking 2 week-old cultures in distilled water D-Glucosamine -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n s +

-

w

-

+ + V

s n s + +

-

n + s

680

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Fig. 337. R. babjeuae, CBS 7808 xCBS 7809. Teliospores, which developed from a mix of opposite mating type cells after two weeks on corn meal agar at 25'*C, were soaked for 3 days in deionized water; germination occurred after 2 days on 2% agar. Arrows indicate metabasidia; the upper metabasidium has a terminal basidiospore attached. Bar= 10 |im.

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + Ethylamine + 50% Glucose5 -Keto-D-gluconate s Saccharate n yeast extract agar 10% NaCl/5% glucose n D-Glucuronate Starch formation Xylitol w Urease + L-Arabinitol Nitrite s Arbutin + Gelatin liquefaction n Cadaverine s D-Glucono-5-lactone + Creatine Growth at 3 0 ^ + Creatinine Growth at 37°C L-Lysine s Co-Q: 10 (Golubev 1993). Mol%G + C: 66.2 (PC: Golubev 1993). Monosaccharide composition of extracellular polysaccharides: Mannose, galactose, glucose, and fucose (Golubev 1993).

Origin of the strains studied: Herbaceous plants, Moscow Region, Russia, from Bab'eva et al. (1973). Complementary mating types: CBS 7808 (VKM Y-2275, mating type AI) and CBS 7809 (VKM Y-2276, mating type A2). Type strain: CBS 7808. Comments: This species came to our attention after the completion of this generic review, therefore the data recorded above are from the original description. We briefly examined teliospore germination from mixes of compatible mating types on corn meal agar for 2 weeks at 25°C. After soaking the teliospores in sterile deionized water for one week and moving them to 2% agar, germination occurred and 1-2 celled metabasidia (6^mx2.6|im) form (Fig. 337). More measurements of metabasidia are required to assure an accurate assessment of size. The basidiospores formed on small persistent pedicels and up to 3 pedicels were observed at different sites on the terminal cell of 2-celled metabasidia. We also observed single basidiospores on pedicels from the basal cell. These basidiospores may grow parallel to the basal

Fig. 338. R. babjeuae, CBS 7808xCBS 7809. TeHospores, which developed from a mix of opposite mating type cells after two weeks on corn meal agar at 25"C, were soaked for 3 days in deionized water; germination occurred after 2 days on 2% agar. The elongate basidiospore from the basal cell is on a short pedicel (indicated by lower arrow), and typically grows parallel to the metabasidium. The terminal cell has a pedicel (indicated by upper arrow); the nearby cell is not attached to the pedicel. Bar= lOjim.

cell (Fig. 338). Additional strains were collected from soil, Krasnodar Region, Russia, by Golubev and Vdovina (1973) (2); silage, Kiev Region, Ukraine, by Shchelokova (1964) (1) and from peat, birch leaves, soils in Novgorod, Nizhni Novgorod regions and East Pamir by Bab'eva and Kartintsev (1974). 86.2. Rhodosporidium dacryoideum Fell, I.L. Hunter & Tallman (1973) Synonym: Sakaguchia dacryoides (Fell, I.L. Hunter & Tallman) Y. Yamada, Maeda & Mikata (1994a)

Growth in 5% malt extract: After 3 days at 24°C, the haplophase cells are ovoid, (l-5)x(3-9)[jim, single, in pairs and short chains; budding may occur on a short stalk. A ring and film are not present; there is a light sediment. After one month, there is a light to heavy ring and moderate sediment. Growth on 5% malt agar: After 7 days at 24°C, the growth is red-orange, smooth, creamy, glistening, and slightly raised; the margin is entire. Cell morphology is similar to that in malt extract. After one month, the growth is slightly darker in color, glistening, creamy to pasty; occasionally the edge is slightly wrinkled. Dalmau plate culture on corn meal agar: After one week at 24°C, mycelial growth may be absent or there may be long thin true mycelium or short primitive pseudomycelium. Life cycle (Fig. 339): The species is heterothallic (bifactorial), although a self-sporulating strain has been observed. Mating pairs with dissimilar A and B factors (AIBlxA2B2, AlB2xA2Bl) produce the complete life cycle. Mixing of strains with similar A and dissimilar B factors results in mating and formation of short.

Rhodosporidium Banno / J.W. Fell and A. Statzell-Tallman MATIN G^TJPJS r ^

INCOMPLETE CLAMPS.EACH WITH ENTRAPPED NUCLEUS

HAPLOID ) BUDDING

'

^2 Bl

681

CONJUGATION AND LIMITED HYPHAL GROWTH

" CONJUGATION

METABASIDIUM

DIKARYOTIC MYCELIUM FORMATION

TELIOSPORE y FORMATION AND KARYOGAMY

Fig. 339. Life cycle R. dacryoideum, CBS 6353xCBS 7142 (Fell et al. 1973).

distorted, true hyphae lacking both clamp connections and teliospores. There is no mating reaction with pairs having similar B factors. Conjugation between mating types with opposite A and B factors is usually within 24 hours of mixing on corn meal agar at 24°C; this may be variable, mating may not occur for one week or longer. After one week binucleate mycelium is sparse to abundant with hook-to-peg clamp connections. Conidia have not been observed on the hyphae. Teliospores are lateral or occasionally terminal on the hyphae. The lateral teliospores develop either directly from the hypha on a short sporophore or from clamp connections. After one week the teliospores are subglobose and slightly dacryoid (4-10)x(5-14)[im, or more pronounced dacryoid with a subglobose base (4-8)x(7-10)[xm and an apical tip measuring (0.3-3)x(0.8-6)(im. After one month most teliospores exceed 6x11 ^m. The apical tip may be wider than long (l-2)x(2-3)^im. Basal clamp connections join the teliospore to the hypha or to the sporophore. Germination of the teliospores is often difficult to obtain. The best results were obtained by soaking one month old cultures in distilled water at 24°C. After 10-25 days of soaking, germination (Fig. 340) was observed directly from the distilled water preparation. The metabasidium was 2 to 4-celled, (3^)x(24-59)|im with lateral and terminal basidiospores. Progeny were isolated by micromanipulation of basidiospores derived from AlBlxA2B2. Resulting Fi mating types were AlBl, A2B2, A2B1, and one strain similar to the A^B = heterokaryons of Coprinus lagopus and Schizophyllum commune (see Raper 1966, for a discussion

of this behavior). The yeast cells of the A^B= strain were generally uninucleate, although binucleate cells were present. A mycelium developed that was initially binucleate; during the process of clamp formation and nuclear segregation, the clamps were not completed and one nucleus remained in the clamp and one nucleus was in the subterminal cell. The terminal cells were uninucleate. Teliospores were formed. Conjugation was not observed when the individual mating types were mixed with strains of the other species in the genus. Fermentation: absent.

Fig. 340. R. dacryoideum, CBS 6353 x CBS 7142. A teliospore, which developed from a mix of opposite mating type cells after 4 weeks on corn meal agar, was soaked for 2 weeks at 24*'C; it germinated to a 2-celled metabasidium with lateral basidiospores. Bar= lOfxm.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

682

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V V V V

+

-

V

V

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

w/+

V

+/v

-

+ s + +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Urease + 5-Keto-D-gluconate n Gelatin liquefaction Saccharate PABA-free w D-Glucuronate s Thiamine-free w Growth at SOT + 50% Glucoseyeast extract agar Growth at 33T 10% NaCl/5% glucose Starch formation Co-Q: 10 (Sugiyama et al . 1985). Mol% G + C: 57.8, 58.1, 58.4, 58.9 {T^: Hamamoto et al. 1986b). Cell hydrolyzates: Xylose; absent (Sugiyama et al. 1985).

Origin of the strains studied: Marine waters of the southern Indian and Pacific Oceans (10) in surface waters to depths of 4156m at water temperatures from 0.6°C to 8.0°C (Fell et al. 1973). Complementary mating types: CBS 6353 (mating type AlBl) was collected April 1966, at 6r31'S latitude, 95°56'W longitude, at a water depth of 1738 m, temperature of 1.8°C and salinity of 34.72%o; CBS 6354 (mating typQ A2B2) collected July 1966, 43°00'S, 139°59'W, 156 m deep, 80°C and 34.40%o; CBS 6355 (mating type A2B1) collected April 1966, 6 r 3 r s , 95°56'W, 3929m deep, 0.6rC, 34.71%o; CBS 6356 (mating type ^752) collected April 1966, 6 r 3 r s , 95°56'W, 3m deep, 4.02°C and 33.96%o (Fell et al. 1973). CBS 6357 is miA^B= strain from parental strains CBS 6353 and CBS 6354. Type strain: CBS 6353. Comments: The species is widespread in Antarctic marine waters; we are not aware of any other sources of isolates. Haploid strains of R. dacryoideum fit the description of Rhodotorula minuta, however the type strain of Rhodotorula minuta does not mate with the mating types of R. dacryoideum. Nucleotide sequence analysis of a partial region of the LSU rRNA also indicates that they are separate species (Fell et al. 1992).

86.3. Rhodosporidium diobovatum Newell & I.L. Hunter (1970)

Synonym: ITorulopsis terrestris Verona (1935)

Growth in malt extract: After 3 days at 22°C, the haplophase cells are round to ovoid (l-6)x(2-9) |im, and occur singly or in pairs. A slight sediment is formed. After one month, there is a heavy sediment and a thin to moderate film of cells; large round cells (to 9-11 fxm diameter) with large oil globules are present. Growth on malt agar: Cell morphology is similar to that in malt extract. The streak colony is coral-red, raised, mucoid, the border entire. Dalmau plate culture on corn meal agar: Some strains produce only budding cells, whereas other strains produce, in addition to budding cells, a primitive pseudomycelium or fine, true hyphae (diameter 2 |im) bearing blastoconidia with dimensions similar to the yeast-phase cells. These blastoconidia are often formed at septa, on structures homologous to clamp connections, but aberrant and incomplete. Each primary hypha is formed by a single yeast-phase cell. Life cycle: The species is heterothallic; a biallelic {Al and A2) system of sexual incompatibility factors exists. Mixing of yeast-phase strains of ^7 and A2 on corn meal agar results in conjugation within 24 hours. Plasmogamy takes place, and binucleate hyphae (diameter 3 \xm) are formed from one of the conjugant cells, or from the conjugation tube joining them. Clamp connections are hook-to-peg or peg-to-peg. After 3 days of hyphal growth, unicellular, round to obovate, diobovate, or diclavate, (6ll)x(6-22)|im, heavy-walled terminal teliospores form. The teliospores have clamp connections at the basal septum and are binucleate at first, but become uninucleate at maturity In addition to teliospores, blastoconidia form on the binucleate hyphae. Additional incompatibility factors may exist as several isolates have been examined

Fig. 341. R. diobovatum, CBS 6084xCBS 6085. Teliospore, which developed from a mix of opposite mating type cells after 5 days on com meal agar at 22°C, developed a lateral metabasidium with lateral and terminal basidiospores, within 10 days of soaking in distilled water. Bar=10|xm.

86. Rhodosporidium Banno / J.W. Fell and A. Statzell-Tallman

683

Origin of the strains studied: Marine sources in southern Florida (14) including water over a southeast Florida reef with a water temperature of 29°C and a salinity of 36.2%o and from mangrove detritus in the Florida Everglades, water temperature 20°C, salinity 19%o (Newell and Hunter 1970). Complementary mating types: CBS 6084 (Newell strain FR 4, mating type A2) and CBS 6085 (Newell strain FR 5, mating type Al). Both strains were collected from water over a southeast Florida reef Type strain: CBS 6085.

Fig. 342. R. diobovatum, CBS 6084xCBS 6085. Teliospore, which developed from a mix of opposite mating type cells after 5 days on corn meal agar at 22°C, developed a terminal metabasidium with lateral and terminal basidiospores, within 10 days of soaking in distilled water. Bar=10|im.

which mate with A2 strains to produce mycelium but fail to develop teliospores. Germination of the teliospores occurs after 5-10 days of soaking in distilled water. A lateral (Fig. 341) or terminal (Fig. 342) club-shaped phragmometabasidium, (3-5)x(l3-22) |im develops from the teliospore with lateral and terminal basidiospores, which are either Al or A2 mating types. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + +

-

+ + + w + + + +

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+

V V

+ + + +

-

+/w +/w

-

+ + +

Additional assimilation tests and other growt characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% Glucoseyeast extract agar 10% NaCl/5% glucose

n n +

-

Starch formation Urease Gelatin liquefaction Growth at 3 0 T Growth at 3 7 T

-

+

-

+

-

+

Co-Q: 10 (Yamada and Kondo 1973). M o l % G + C:67.3 (T^: Nakase and Komagata 1971c), 64.8-66.1 (7; Hamamoto et al. 1986b). Cell hydrolyzates: Xylose absent (Sugiyama et al. 1985).

Comments: R. diobovatum is prevalent in near shore marine waters of South Florida, the Caribbean and the Bahamas. The species is often found in the vicinity of coral reefs (Fell and Statzell-Tallman, unpublished data). The species was reported from terrestrial plants and soils (Kvasnikov et al. 1975, Bab'eva and Kartintsev 1974), although those strains may belong to the newly described R. babjeuae (Golubev 1993). Strains of R. diobovatum fit the description of Rhodotorula glutinis, although the type strain of Rhodotorula glutinis does not mate with either mating type ofR. diobovatum. Nucleotide sequence analysis of a partial region of the LSU rRNA indicates that these two species are distinct and closely related (Fell et al. 1992). Barnett et al. (1990) list Torulopsis terrestris Verona (CBS 994) as a synonym of R. diobovatum, however, that strain was not included in the present study. 86.4. Rhodosporidium fluviale Fell, Kurtzman, Tallman & Buck (1988) Growth in 5% malt extract: After 3 days at 25°C, cells are ovoidal to spheroidal, (3.5-8.0)x(5.4-9.4) (im. Cells occur singly or in pairs. After one month there is a heavy sediment and a light ring, but not a pellicle. Growth on 5% malt agar: After 3 days at 25°C, cells are similar to those in malt extract with a few larger cells to 10.5 jim. The streak culture is light scarlet orange, smooth, glistening, slightly raised and the border is entire. Teliospores form in patches at the edge of the colony and they are slightly larger than those formed on corn meal agar. Dalmau plate cultures on corn meal agar: After 6 days at 25^C, true mycelium forms with incomplete (rarely complete) clamps at the septa and at the teliospores. Nuclear stains indicate that the hyphae are uninucleate suggesting that formation of teliospores is the result of monokaryotic fruiting. The teliospores are spheroidal to subglobose, (7.4-10.7)x(8.7-12.l)jim, usually single or in pairs. A short, hyphal-like tip may form on the teliospores. In month old cultures, teliospores form in groups of up to 12. The walls are smooth but may become warty in older cultures. Teliospores are intercalary, rarely terminal or lateral on short branches.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

684

Co-Q: Not determined. Mol% G + C: 61.4 (BD: Fell et al. 1988). Cell hydrolyzates: Not determined.

Origin of the strains studied: Collected in October 1972, from brackish water of the Miami River, Florida (Fell et al. 1988). Type strain: CBS 6568 (Fell strain ML 1580, NRRL Y-12922).

Fig. 343. R.fluviale, CBS 6568. Teliospore, which formed on corn meal agar at 25*'C within one month, germinated to a 4-celled metabasidium with lateral basidiospores, after soaking for 2 weeks in deionized water. Bar=10^im.

Life history: Thick-walled teliospores form on the hyphae in the apparent absence of mating. These teliospores may germinate after one month on corn meal agar; germination in higher frequencies occurs after soaking 1-month-old teliospores for 2 weeks in distilled water followed by transfer to 2% aqueous agar. The resulting metabasidium is club-shaped (Fig. 343), consisting of 4 cells that break up into individual cells (a characteristic also observed in R. sphaerocarpum). Ovoid basidiospores, (~2.5x4.0)|im, form laterally on the metabasidium on short sporophores. Single basidiospores isolated by micromanipulation develop into homokaryotic fruiting strains similar to the parental strain. Fermentation: absent. Assimilation: + A/^-Acetyl-D-glucosamine Glucose Galactose + Methanol L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + s +

5 -Keto-D-gluconate Saccharate D-Glucuronate 50% Glucoseyeast extract agar 10% NaCl/5% glucose

n

-

+ +

-

+ + + +

Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ +

Urease Gelatin liquefaction Growth at 25T Growth at 30T

+

-

+ + + + + + + ws + w

-

+ + Additional assimilation tests and other g[ro>^ characteristics: Starch formation 2-Keto-D-gluconate -

-

w

-

+

-

Comments: This species has only been isolated from one location. Nucleotide sequence analysis of a partial region of the LSU rRNA (Fell et al. 1992) suggests that R. fluviale may be related to strains of Sporidiobolus ruineniae. 86.5. Rhodosporidium kratochvilovae Hamamoto, Sugiyama & Komagata (1988a) Growth on 5% malt extract: After 3 days at 25°C, the cells are encapsulated, ovoidal, (3-6)x(4-10)|im, occurring singly and in pairs. Growth is pink. After one month, a ring and sediment are present. Growth on 5% malt extract agar: After one month at 25°C, the colony is peach- to orange-colored, slightly raised, the surface is semiglossy becoming rugose, while the margin is smooth, entire and fringed with true mycelium. The mycelium, which develops within one week, bears teliospores that are intercalary, terminal, or lateral on short stalks and false clamps at the septa. Dalmau plate culture on corn meal agar: After one week at 19°C, septate hyphae have formed bearing false clamps and spheroidal or obpyriform teliospores (79^m). Life cycle: Mycelium with teliospores and false clamps at the septa develops from a single cell. Hamamoto et al. (1988a) reported that the hyphal cells are uninucleate and as growth occurs one nucleus remains in the incomplete clamp and one in the subterminal cell. They found that the teliospores were uninucleate and rarely germinated when 10-day-old cultures were soaked for 10 days in distilled water at \TC followed by transfer to 2% aqueous agar for 10 days. Our investigations found that germination would occur after incubating for 8 weeks at 19''C on corn meal agar. A four-celled metabasidium (2037)x(4-5)|im formed that produced lateral and terminal basidiospores, one basidiospore per metabasidial cell (Fig. 344). Fermentation: absent.

86. Rhodosporidium Banno / J.W. Fell and A. Statzell-Tallman

685

region of LSU rRNA (Fell et al. 1992) indicates that R. kratochvilovae is related to Rhodosporidium diobovatum and Rhodotorula glutinis which is in agreement with the similarities in physiological characteristics of these species.

Fig. 344. R. kratochvilovae, CBS 7436. Teliospore formation after 7 days at 19°C on corn meal agar and germination after 2 months. Bar = 10 \xm.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + +

-

+ + s

-

+ + + w s

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+

-

+ + + + +

-

+ w

-

+

+ Additional assimilation tests and other g[ro\ characteristics: 2-Keto-D-gluconate n Starch formation -

n 5-Keto-D-gluconate Urease Saccharate Gelatin liquefaction D-Glucuronate Growth at 30T n Growth at 37''C 50% Glucoseyeast extract agar 10% NaCl/5% glucose + Co-Q: 10 (Sugiyama et a]I. 1985). Mol% G + C: 64.7-64.9 (7;^: Hamamoto et al. 1986b). Cell hydrolyzates: Xylose absent (Sugiyama et al. 1985).

+

-

+

86.6. Rhodosporidium lusitaniae A. Fonseca & Sampaio (1992) Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal or bacilUform, measure (2.5-5.9)x(5.920.1) ^im, and occur in pairs or chains of three to four. There is a sediment present. After one month, neither a ring nor pellicle was observed. Growth on 5% malt extract agar: After one month at 25''C, the colony is peach-colored, the surface is glossy and smooth, the texture is soft, the cross section is slightly raised and the border is fringed with mycelium. The latter bears clamps at the septa and spheroidal teliospores that may be intercalary, lateral on stalks or terminal. The teliospores are 9.5-13.3 ^im in diameter and occur singly or in clusters of two to four. Dalmau plate culture on corn meal agar: After one month at 25*'C, true mycelium with teliospores and clamp connections form in abundance. Life cycle (as described by Fonseca and Sampaio 1992): The life cycle was observed on corn meal agar and potato dextrose agar. Mating between cells did not take place. Uninucleate cells germinated to produce dikaryotic hyphae with complete clamp connections and terminal, intercalary and lateral uninucleate teliospores (Fig. 345). Teliospores were transferred in small pieces of the agar to demineralized water and allowed to soak for 2 weeks at room temperature. At this time slender protrusions (measuring 5-20 |im) arose from the teliospores. The teliospores were transferred to 2% agar and, after 2 months at room temperature, 2^-celled metabasidia (3.2-4.3x16-22 jim) emerged from the protrusions. Photographs by Fonseca and Sampaio (1992) show the teliospore with an elongate stalk terminated by a 4-celled

-

Origin of the strains studied: A record of the original isolation data of this species was not found. Two strains were included in the original description: the type strain and CBS 7293 (lAM 13073, CCY 62-3-2, YK 219). Type strain: CBS 7436 (lAM 13072, CCY 62-3-1, YK 218). Comments: Our results of assimilation tests based on CBS 7436 differed from the original description on cellobiose, D-xylose, L-arabinose and galactitol. Our results agreed with those of Barnett et al. (1990) who studied CBS 7293. Nucleotide sequence analysis of a

Fig. 345. R. lusitaniae, CBS 7604. Teliospore formation after 2 weeks on com meal agar at 19°C. Bar= 10 |im.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

686

metabasidium. One to four basidiospores (2.2-2.7x4.38.1 jim) arose from a single site at each cell of the phragmometabasidium.

isolated using media containing lignin-related phenolic compounds as the sole carbon source.

Fermentation: absent.

86.7. Rhodosporidium malvinellum Fell & I.L. Hunter (Fell 1970b)

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s

-

+ +

-

s s

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

+ + + +

-

+ +

-

+/

-

+ +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Veratryl alcohol 5-Keto-D-gluconate n Vanillic acid Veratric acid Saccharate Ferulic acid D-Glucuronate + Arbutin />-Hydroxybenzoic acid Cadaverine m-Hydroxybenzoic acid Protocatechuic acid Creatine /7-Coumaric acid Creatinine +/w Caffeic acid L-Lysine Ethylamine hydrochloride + Cinnamic acid 50% GlucoseSyringic acid yeast extract agar Sinapic acid 10% NaCl/5% glucose + Gallic acid Starch formation Salicylic acid Urease + Gentistic acid Sodium nitrite + Guaiacol Gelatin liquefaction 0.01% Cycloheximide Glucono-5-lactone + Growth at 30°C L(+)-Tartaric acid + Growth at ?>TC Malic acid + Vanillyl alcohol Co-Q: 9 (Fonseca and Sampaio 1992). Mol%G + C: 62.0-62.1 (r^: Fonseca and Sampaio 1992). Cell hydrolyzates: Xylose absent (Fonseca and Sampaio 1992)

+

-

+ + + + + +

-

Synonym: Kondoa malvinella (Fell & I.L. Hunter) Y. Yamada, Nakagawa & Banno (1989a)

Growth in 5% malt extract: After 3 days at \TC, the ovoidal to spheroidal haplophase cells measure (27) X (3-7) [xm; they are single, occasionally in pairs with budding on short necks. A light sediment is formed. After one month there is a moderate sediment. Growth on 5% malt agar: After 3 days at 12°C, the cell sizes are as above. The streak is creamy white, smooth and semi-glistening. The periphery is entire and the cross section is raised. At 2 weeks, the streak is light mauve and at one month the color has intensified. Dalmau plate culture on corn meal agar: Pseudomycelium is generally absent; occasionally short branched chains of cells are present. Life cycle: The species is heterothallic (biallelic, unifactorial); when compatible mating types are mixed on corn meal agar at 12°C, conjugation and binucleate mycelium with clamp connections are present within 3 days. Teliospores are rare after 7 weeks and abundant after 3 months. The teliospores are subglobose (510)x(7-12)|im. They develop singly and are attached to the hyphae by a short stalk (Fig. 346). Germination has only been observed once. The phragmometabasidium was 2-celled with lateral and terminal basidiospores.

+

-

Fermentation: absent.

+

-

Origin of the strains studied: Fonseca and Sampaio (1992) isolated three strains: IGC 4641 from soil collected in a wood, Lisbon, Portugal, Spring 1987; IGC 4599 and IGC 4642 from dried leaf material collected in a natural park, south of Lisbon (Arrabida) in the summers of 1989 and 1990. Type strain: CBS 7604 (IGC 4641). Comments: In contrast to our results, Fonseca and Sampaio (1992) reported that the species was unable to utilize L-arabinose and cellobiose. The strains were

Fig. 346. R. malvinellum, CBS 6082 x CBS 6083. Cells of opposite mating types were mixed on com meal agar and grown at 12"C for 3 months; teliospores formed on a short stalk. Bar= 10 ^im.

86. Rhodosporidium Banno / J.W. Fell and A. Statzell-Tallman

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s V + + V + + s V V s -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

growth

Urease 2-Keto-D-gluconate n Gelatin liquefaction 5-Keto-D-gluconate n PABA-free Saccharate D-Glucuronate Thiamine-free 50% GlucoseGrowth at 20''C yeast extract agar Growth at 24°C 10% NaCl/5% glucose Starch formation Co-Q: 9 (Yamada and Kondo 1973). Mol% G + C: 50.5 {T^\ Nakase and Komagata 1971c). Ceil hydrolyzates: Xylose absent (Sugiyama et al. 1985).

Origin of the strains studied: Marine waters of the southern Pacific, Indian and Antarctic Oceans (17) (Fell 1970b). Complementary mating types: CBS 6082 (mating type Al\ collected April 1966 at 60"29'S, 9 r 5 6 ' W at 53 m deep; CBS 6083 (mating type A2), collected on the same date and location at a water depth of 16 m with approximately the same temperature and salinity (Fell 1970b). Type strain: CBS 6082. Comments: The species appears to be restricted to marine habitats; in addition to the isolations from the southern oceans, Laurenavichene et al. (1989) isolated this species from coastal areas of the Baltic Sea. R. malvinellum has the physiological and life cycle characteristics typically found in other species of Rhodosporidium. The distinctive colony color is useful for species identification. Based on nucleotide sequence data the species does have distinctive genetic differences from other species of Rhodosporidium. Blanz and Gottschalk (1984, 1986) and Blanz and Unseld (1987) through examination of the nucleotide sequences of the 5S rRNA of 49 species of basidiomycetes found that R. mahinellum was more closely related to the Hymenomycetes, Atractiella solani and Phleogena faginea, than to R. toruloides. Blanz and Gottschalk suggested that R. malvinellum should be transferred to a separate genus. Yamada et al. (1989a) examined partial regions of the large and small subunits

687

of rRNA of R. malvinellum, R. toruloides, Leucosporidium scottii and Rhodotorula lactosa. Based on the comparative differences in nucleotide sequences, Yamada et al. (1989a) described the genus Kondoa with the single species Kondoa malvinellum. Using the description of R. malvinellum published by Fell (1970b), Yamada et al. considered that Kondoa was morphologically unique through the production of teliospores attached by short stalks and 2-celled phragmometabasidia. However, other species, such as R. toruloides and R. dacryoideum produce lateral teliospores on short stalks or sporophores and their phragmometabasidia are 2^-celled. Whether or not 2-celled phragmometabasidia are characteristic of R. malvinellum is unknown as germination has only been observed one time (Fell 1970b). Yamada et al. (1989a) also point out that R. malvinellum, as a psychrophile, is distinct from the other species of Rhodosporidium. It should be noted that R. malvinellum was collected from low temperature environments and that psychrophilic characteristics are also found in other species (e.g., Leucosporidium scottii, L. antarcticum, Mrakia frigida) collected from cold habitats. Although it is difficult to distinguish phenotypic differences between Kondoa and Rhodosporidium, the genetic differences were confirmed by Fell et al. (1992) who examined a partial region of the LSU rRNA for 117 species of basidiomycetous yeasts. Based on the species examined, R. malvinellum appears to be more related to species of Bensingtonia than to Rhodosporidium spp. This suggested relationship, and that presented by Blanz and Unseld (1987), indicates the need for more in depth examination of nucleotide sequence analyses and their phylogenetic significance at the generic level. For taxonomic purposes, the only distinctive phenotypic character appears to be color, and separation of genera based on shades of color does not seem either warranted or practical. Therefore, we have tentatively maintained the taxonomic binomial R. malvinellum with the suggestion that further investigations may confirm Kondoa as a distinct genus. 86.8. Rhodosporidium paludigenum Fell & StatzellTallman (1980a) Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to elongate, (2-4)x(3-ll)p-m. They occur singly and in pairs. There is a light sediment. After one month, there is a heavy ring with light to heavy sediment. Growth on 5% malt agar: After 3 days at 25°C, the cell morphology is similar to that in malt extract. The one-month-old streak culture is salmon-orange, smooth, glistening, slightly raised or rugose and the border entire. Dalmau plate culture on corn meal agar: After 6 days at 25°C, there are short chains of budding cells, and short lengths of true mycelium may be present. Life cycle: The species is heterothallic. When opposite

VIb. Descriptions of teleomorphic basidiomycetous genera and species

688

mating types were mixed on corn meal agar (prepared with 20%o seawater) and incubated at 22-25*^0, true hyphae, bearing spheroidal (13-17 [xm diameter) teliospores, developed within 6 days. The teliospores were in clusters of 2 to 4, intercalary and rarely terminal on the hyphae. Teliospore germination after 4 weeks on Corn meal agar, resulted in 2- to 4-celled metabasidia (Fig. 347). Basidiospores were of the two parental types, indicating a unifactorial sexual system. R. paludigenum does not mate with the other species included in the genus. Fermentation: absent. Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s + + + s

-

+

-

s s + s s

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

-

+ + + + s + +

-

w w

-

Fig. 347. R. paludigenum, CBS 6566 x CBS 6567. Cells of opposite mating types were mixed and incubated on com meal agar for 6 days; resulting teliospores germinated after 4 weeks to form a phragmometabasidium with lateral and terminal basidiospores. Bar=10^im.

86.9. Rhodosporidium sphaerocarpum Newell & Fell (1970) Anamorph: Rhodotorula glutinis (Fresenius) Harrison var. salinaria Hirosawa & Takada Synonym: Rhodotorula glutinis (Fresenius) Harrison var. salinaria Hirosawa & Takada (1969)

Growth in 5% malt extract: After 3 days at 20°C, the cells are spheroidal to ellipsoidal, (3-5) x (5-7) |im, single + or in pairs. Often newly divided cells form on very short + necks <0.5 [im long. There is an orange to pink-orange Additional assimilation tests and other growth sediment. After one month the sediment becomes thick and a weak ring has formed; spheroidal cells (7 fxm) may characteristics: 2-Keto-D-gluconate n Starch formation be present. 5 -Keto-D-gluconate n Urease + Growth on 5% malt agar: Cell morphology at 20°C, is Saccharate + Gelatin liquefaction similar to that in malt extract. The streak culture at 3 days D-Glucuronate Growth at 30«C + is smooth, glossy, orange to pink-orange; texture is highly 50% GlucoseGrowth at 37''C mucoid; cross section is raised, spreading and the border yeast extract agar 10% NaCl/5% glucose is entire. After one month the culture becomes extremely Co-Q: 10 (Sugiyama et al. 1985). mucoid; if kept at 5°C for one month, the culture does Mol%G + C: 64.9-65.3 (Fell et al,. 1988). not become as mucoid as observed at 20°C, and develops Cell hydrolyzates: Xylose absent (Sugiyama et al. 1985). a yellow pigmentation. Origin of the strains studied: Intertidal black rush Dalmau plate culture on corn meal agar: Some (Juncus roemerianus) marsh and mangrove (Rhizophom strains produce no mycelium, others produce, from mangle) swamp waters bordering Card Sound near Miami, individual cells, short, fine, primary hyphae (diameter Florida, April 1973 (3) (Fell and Statzell-Tallman 1980a); 1-3 fim) with 1 or 2 septa; self-sporulating strains develop extensive, larger (diameter 3.4-5.4 |im) septate seawater, Florida by Ahearn (1). hyphae, bearing large, spherical, thick-walled, terminal or Complementary mating types: CBS 6567 (mating intercalary teliospores. type Al, Fell strain ML 2226) and CBS 6566 (mating type Life cycle: R. sphaerocarpum has a biallelic unifactorial A2, Fell strain ML 2225). mating system. Mixing of haploid mating types Al and ^2 Type strain: CBS 6566. on corn meal agar at 25°C results in conjugation followed Comments: Haploid strains of R. paludigenum fit the by hyphal development from the conjugation tube, or from description of Rhodotorula graminis, however, the type one of the two conjugate cells (Fig. 348). The mycelium is strain of Rhodotorula graminis does not mate with either dikaryotic; clamp connections form at the septa and thickmating type of R. paludigenum. Additionally, nucleotide walled teliospores develop terminally and intercalary sequence analysis indicates that the two species are on the hyphae. The teliospores are at first binucleate distinct, but closely related. and eventually become uninucleate. They are spheroidal.

689

Rhodosporidium Banno / J.W. Fell and A. Statzell-Tallman MATING T Y P E S /4/ and A2 UNINUCLEATE MYCELIUM

CONJUGATION

DIKARYOTIC MYCELIUM

/

TELIOSPORE FORMATION BLASTOCONIDIA

TELIOSPORE FORMATION BLASTOCONIDIA GERMINATION AND MEIOSIS GERMINATION AND MEIOSIS

Fig. 348. Diagrammatic representation of the life cycle of R. sphaerocarpum (after Newell and Fell 1970).

smooth, and dark in color at maturity, occurring singly, in pairs, and in branched chains of as many as 12 or more. When teliospores are present in large quantities the culture becomes dark brown. The teliospores germinate if placed in distilled water at 25°C for one month followed by transfer to malt agar at the same temperature. The teliospore germinates to a 4-celled metabasidium, each cell capable of repeated mitotic divisions for the formation of several basidiospores. The metabasidium eventually breaks up into individual cells (Fig. 349). The basidiospores are haploid; a haplo-lethal effect occurs in some strains: examination of progeny from germination of teliospores indicated that all colonies were of mating type Al\ apparently mating type A2 did not survive. Some strains produce teliospores in the absence of mating. The yeast cells are uninucleate and produce uninucleate teliospore-bearing hyphae without clamp connections. The mycelial formation is less extensive than the dikaryotic mycelium produced by the conjugating strains. Teliospores of the self-sporulating strains germinate under the same conditions as described above for the heterothallic strains to produce phragmometabasidia with haploid basidiospores (Fig. 347). Although Newell and Fell (1970) postulated that the haploid cells were the result of a meiotic division in the basidium, it is likely that these strains are homokaryotic fruiters similar to those of Leucosporidium scottil Studies have not been undertaken to confirm either possibility. Strains of R. sphaerocarpum fit the description of Rhodotorula glutinis: The type strain of Rhodotorula glutinis does not mate with mating types of R. sphaero-

carpum. Similarly, nucleotide sequence analysis indicates that the two species are separate (Fell et al. 1995). Fermentation: absent. Assimilation of carbon compounds: Glucose + A^-Acetyl-D-glucosamine Galactose + Methanol L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + +

-

+ + +

-

+ + + +

Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ +

-

+

-

V V

+ + V

-

+ Additional assimilation tests and other g rowth characteristics: Urease + 2-Keto-D-gluconate 5 -Keto-D-gluconate Gelatin liquefaction Saccharate Thiamine-free Growth at 2TC D-Glucuronate + Growth at 30T w 50% Glucoseyeast extract agar Growth at 33T -

10% NaCl/5% glucose + Starch formation Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 64.9-65.4 (7;^: Nakase and Komagata 1971c); 64.0-64.1 (BD: Fell et al. 1988); 62.2-62.7 {T^: Hamamoto et al. 1987). Cell hydrolyzates: Xyl ose absent (Sugiyama et al. 1985).

690

VIb. Descriptions of teleomorphic basidiomycetous genera and species Rhodotorula gracilis Rennerfelt (1937) Rhodotorula glutinis (Freasenius) EC. Harrison var. rufusa lizuka & S. Goto (1965)

Growth in 5% malt extract: After 4 days at 2 5 T , heterothallic haploid cells are spheroidal to elongate, ( 2 7) X (4-12) |im. The homothallic cells are ovoidal to obtuse oblong, (3-7)x(6-30)jim, and may form true mycelium and teliospores. Growth on 5% malt agar: After 4 days at 25°C, the cells are similar in size to those in malt extract. The streak culture is pink to orange, the border is entire, the surface is smooth and glistening, the texture is soft to slightly mucoid. After one month, the color becomes scarlet. The homothallic cultures have dark brown areas consisting of true mycelium and teliospores.

Fig. 349. R. sphaerocarpum, CBS 5939 x CBS 5940. Teliospores formed Dalmau plate culture on corn meal agar: After from a mix of cells of opposite mating types after 2 weeks on com meal agar at 25°C. After soaking in distilled water for 1 month, 2 weeks at 25°C, pseudomycelium of heterothallic strains germination occurred within one day of placing the teliospores on may be absent or range from short branched chains of V8 agar. Bar=10jim.

Origin of the strains studied: Marine sources near the Antarctic (Palmer) Peninsula and Palmer Archipelago, Jan.-Feb. 1966, from waters whose temperatures ranged from -1.68 to 1.33°C and salinities of 32.48%o to 34.72%o (33) and from the Caribbean Sea, Jan.-Feb. 1967, 100-150 miles off the coasts of Columbia and Panama, over the Columbian Basin in water depths of 184297 meters where temperatures ranged from 12.90 to 17.72°C and salinities of 35.62 to 36.42%o (4) (Fell et al. 1973); salt farm in 1967 at Yashima along the shore of Seto Inland Sea, Japan (1) (Hirosawa and Takada 1969). Complementary mating types: CBS 5940 (Newell and Fell strain AR-74, mating type Al) collected from the Gerlache Straits near Anvers Island, Antarctica. CBS 5939 (Newell and Fell strain AR-3, mating type A2) collected from Marguerite Bay, Antarctica. Self-sporulating strain: CBS 5941 (Newell and Fell strain AR-77, strain from the Gerlache Straits near Brabant Island, Antarctica. Type strain: CBS 5939.

pseudomycelium to abundant clusters of pseudomycelium. The homothallic strains have extensive true mycelium with clamps and teliospores. Life cycle: The species is homothallic and heterothallic (Fig. 350). Heterothallism: On malt agar at 25*'C cells of compatible mating types (Al and A2) conjugate within 24 hours and plasmogamy occurs. From one cell of the conjugate pair, a septate hypha develops with clamp connections at the septa. Angular, irregularly shaped, thick-walled teliospores develop terminally or laterally on short, clamped sporophores (Fig. 351). After 1-2 weeks the spores germinate to produce clubshaped metabasidia with 2-4 cells. Basidiospores bud laterally and terminally. Some of the basidiospores are heterothallic and capable of mating and repeating the life cycle. Homothallism: In addition to the heterothallic basidiospores, homothallic basidiospores are produced on the metabasidium. These are uninucleate cells that develop directly into a dikaryotic mycelium with clamp connections and teliospores. The teliospores germinate to produce

Comments: R. sphaerocarpum is a commonly occurring species in marine habitats. In addition to the sources previously listed, we found this species to be prevalent in near shore waters of the Caribbean, Bahamas and Florida, often in association with coral reefs. J. Buck (personal communication) reports that R. sphaerocarpum is abundant in freshwater lakes in Connecticut, U.S.A. 86.10. Rhodosporidium toruloides Banno (1967) Anamorph: Rhodotorula rubescens (Saito) EC. Harrison Synonyms: Torula rubescens Saito (1922) Mycotorula rubescens (Saito) Ciferri & Redaelli (1925) Rhodotorula rubescens (Saito) EC. Harrison (1928) Rhodotorula glutinis (Fresenius) EC. Harrison var. rubescens (Saito) Lodder (1934) Rhodotorula longissima Lodder (1934)

Fig. 351. R. toruloides, CBS 14xCBS 349. Teliospores formed from a mix of cells of opposite mating types on corn meal agar at 25°C after 2 weeks. Bar= 10 ^m.

86. Rhodosporidium Banno / J.W. Fell and A. Statzell-Tallman MATING TYPES Ai a n d A2

^-) (jy

691

CONJUGATION.

DIKARYOTIC MYCELIUM

TELIOSPORE FORMATION

AND KARYOGAMY

GERMINATION AND MEIOSIS

Fig. 350. Diagrammatic representation of the life cycle of R. toruloides (Fell et al. 1970).

metabasidia with both heterothaUic and homothalHc Additional assimilation tests and other growth characteristics: basidiospores. Starch formation The heterothaUic and homothalHc basidiospores are 2-Keto-D-gluconate Urease + uninucleate, the hyphae with clamp connections, pro- 5-Keto-D-gluconate Saccharate Gelatin liquefaction v duced by both heterothaUic and homothallic phases, are D-Glucuronate Growth at 30T + binucleate. The teliospores are initially binucleate, and 50% GlucoseGrowth at 2>TC w become uninucleate through karyogamy. At germination yeast extract agar the diploid nucleus undergoes reduction division into the 10% NaCl/5% glucose + Co-Q: 9 (Yamada and Kondo 1973). four haploid nuclei of the metabasidium. Anamorphic Mol% G + C: 60.0-61.0 {T^\ Nakase and Komagata 1971c, Nakase strains of R. toruloidesfitthe description of Rhodotorula 1972b); 59.3-60.5 {T^: Hamamoto et al. 1987). glutinis. The type culture of Rhodotorula glutinis does not Cell hydrolyzates: Xylose absent (Sugiyama et al. 1985). mate with mating types of R. toruloides. Origin of the strains studied: Conifer pulp in Sweden (CBS 14) (Rennerfelt 1937); soil in Japan (CBS 349) Fermentation: absent. (Okunuki 1931); air, Japan (CBS 315, type strain of Torula rubescens Saito; Southern Pacific Ocean (Fell Assimilation: strain 27-51, 1967); gut of a dead porpoise, Bimini, A/^-Acetyl-D-glucosamine Glucose + Bahamas (2); unknown (2). Galactose s Methanol V + L-Sorbose Ethanol Complementary mating types: IFO 0559 (CBS 14) + Glycerol + Sucrose mating type Al and IFO 0880 (CBS 349) mating type A2. + Erythritol Maltose Type strain: Banno designated the mycelial conjugate Cellobiose V Ribitol + of IFO 0559 (CBS 14) and IFO 0880 (CBS 349) as Galactitol Trehalose + the type strain. He deposited the conjugate in the IFO + D-Mannitol Lactose collection as IFO 11588. We recommend the living type + D-Glucitol Melibiose + a-Methyl-D-glucoside + Raffinose strains as the holotype CBS 14 (mating type Al) and Melezitose + Salicin + the allotype CBS 349 (mating type A2). Self-sporulating + Inulin + D-Gluconate strain: CBS 6016 (IFO 8766). DL-Lactate V Soluble starch w + Succinate D-Xylose Comments: In addition to the sources listed above, w + Citrate L-Arabinose we isolated the species from tropical marine waters in D-Arabinose + Inositol South Florida, the Caribbean and Bahamas, usually in + + Hexadecane D-Ribose regions of coral reefs. The species, although widespread + L-Rhamnose Nitrate in the marine habitats, was not abundant. Rhodotorula Vitamin-free + D-Glucosamine -

692

VIb. Descriptions of teleomorphic basidiomycetous genera and species

glutinis var. rufusa, an anamorph of R. toruloides, was isolated (lizuka and Goto 1965) from soil of the Nishiyama oil field, Nirgata Prefectura, Japan. Joo et al. (1988) found a colorless variant of R. toruloides and questioned the use of color in separating Leucosporidium from Rhodosporidium. Sequence analysis of the LSU rRNA indicates that these two genera are phylogenetically distinct (Fell et al. 1992). Comments on the genus A sexual life cycle involving mating between two strains of Rhodotorula glutinis was first reported by Banno (1967) with the description of the genus Rhodosporidium and the species R. toruloides. Although a basidiomycetous life cycle had been established for Sporidiobolus johnsonii Nyland, Banno's observation confirmed the basidiomycetous nature of strains oi Rhodotorula and opened the door to fiirther exploration into sexual cycles in Rhodotorula. Nine additional species followed and we predict that many more will be found. This prediction is based on the presence of numerous anamorphic strains and species of Rhodotorula with unknown teleomorphic states. Some Rhodosporidium species {R. babjevae, R. kratochvilovae, R. diobovatum, R. paludigenum and R. toruloides), based on sequence analysis of the large subunit rDNA, are related to the anamorphs Rhodotorula graminis, R. araucariae, R. mucilaginosa and R. glutinis. Mating

reactions between these teleomorphs and anamorphs has not been observed. Another species, R. fluviale, appears related to Sporidiobolus ruineniae. Sequence analysis indicates that R. dacryoideum and R. maluinellum are not related to the above mentioned species, instead R. maluinellum appears close to Bensingtonia yuccicola, and R. dacryoideum is in a large cluster of species that includes Rhodotorula lactosa and Erythrobasidium hasegawae (Fell et al. 1992, 1995). Because of these nucleotide sequence differences, recommendations have been made (Yamada et al. 1989a, 1994a) to create new genera for R. maluinellum (Kondoa) and R. dacryoideum (Sakaguchia). The difficulty with these recommendations is that the genera do not have sufficient classical taxonomic differences to separate them from Rhodosporidium, or distinguish them as separate genera. The paramount character is derived from nucleotide sequence analysis, which currently is an impractical technique for routine identification. Therefore, we have maintained the present integrity of Rhodosporidium, recognizing the polyphyletic nature of the genus. As our knowledge of the relationships of species and genera in the Heterobasidiomycetes becomes more acute, a stronger basis for generic separations will emerge. Currently, species within the genus can readily be separated by teliospore shape, colony color and a limited number of assimilation tests (Table 70).

87. Sporidiobolus Nyland / A. Statzell-Tallman and J. W Fell

693

87. Sporidiobolus Nyland A. Statzell-Tallman and J.W. Fell Diagnosis of the genus Colony color on solid media includes shades of pink and red due to the presence of carotenoid pigments. Vegetative reproduction by budding, formation of pseudomycelium and true mycelium, and by ballistoconidia. BalUstoconidia develop on simple and branched sterigmata that arise from yeast and mycelial cells. The septal structure consists of a simple pore. Sexual mechanisms are homothallic and heterothallic. In the heterothallic system a dikaryotic mycelium results from the conjugation of a compatible mating pair. A clamp connection is usually present at each cross wall. Intercalary and terminal teliospores develop. Karyogamy takes place in the teliospore (probasidium) which germinates to produce a metabasidium (promycelium). Meiosis takes place during germination with the formation of haploid basidiospores. Homothallism consists of the development of hyphae with teliospores from a single yeast cell in the absence of mating. The yeast phase is diploid; reduction division takes place with the formation of a dikaryotic hypha with clamp connections. Karyogamy occurs in the teliospore. Germination of the teliospore results in a metabasidium with diploid basidiospores. Strains of some species produce teliospores on uninucleate hyphae that lack clamp connections (selfsporulation). The ploidy of the nucleus is unknown. The metabasidia are one-celled (holometabasidia) or septate with two or more cells (phragmometabasidia). The basidiospores are terminal on the holometabasidium and lateral and terminal on the phragmometabasidium. In some species the metabasidium is connected to the teliospore by an aseptate stalk that ranges in length from 3 to 26 |im. Sugars are not fermented, starch formation is negative, Diazonium blue B and urease are positive, xylose is absent from cell hydrolyzates, D-glucuronate and mj^o-inositol are not assimilated. Coenzyme Q-10 is present. Type species Sporidiobolus johnsonii Nyland Species accepted 1. Sporidiobolus johnsonii Nyland (1949) 2. Sporidiobolus pararoseus Fell & Tallman (1981) 3. Sporidiobolus ruineniae Holzschu, Tredick & Phaff (1981) 4. Sporidiobolus salmonicolor Fell & Tallman (1981) Key to species See Table 71. 1.

2(1). 3(2). 4(1).

a b a b a b a b

Homothallic formation of teliospores present -^ 2 Homothallic formation of teliospores absent -^ 4 Nitrate assimilated -^ 3 Nitrate not assimilated Melezitose assimilated Melezitose not assimilated Nitrate assimilated Nitrate not assimilated

S. pararoseus: S. johnsonii: S. ruineniae: S. salmonicolor: S. pararoseus:

Table 71 Key characters of the species in the genus Sporidiobolus Species

Teliospore formation

Assimilation

Homothallic

Self-sporulating

Heterothallic

Melezitose

Sporidiobolus johnsonii

+

-

-

+

+

S. pararoseus

-

+

+

+

-

S. ruineniae

+

+

-

-

+

S. salmonicolor

-

-

+

V

+

Nitrate

694 694 696 697 694

694

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Systematic discussion of the species 87.1. Sporidiobolus johmonii Nyland (1949) Anamorph: Sporobolomyces holsaticus Windisch ex Yarrow & Fell Synonyms: Prosporobolomyces holsaticus (Windisch) Novak & Zsolt (1961) Sporobolomyces holsaticus Windisch ex Yarrow & Fell (1980)

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

s + + + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ +

-

s

-

+ Growth in 5% malt extract: After 3 days at 25°C, the + + cells are ovoidal and elongate, (2-7) x (5-27) |im, single, + +/w in pairs and in short chains. The cells are budding and + may have simple or branched sterigmata bearing kidneyV V shaped ballistoconidia, (4-7)x(8-14)jim. Short hyphal ws + V V strands develop from single cells. A thick, dull, corrugated + grenadine-pink pellicle or a thick ring and a light sediment s s are present. After one month, there is a moderate sediment + and a strongly wrinkled pellicle. There may be extensive + ft)rmation of mycelium with complete clamp connections Additional assimilation tests and other g;rowt and teliospores. characteristics: 2-Keto-D-gluconate 10% NaCl/5% glucose + Starch formation 5 -Keto-D-gluconate Urease + Growth on 5% malt agar: After 5 days at 25°C, the Saccharate Gelatin liquefaction w/streak culture is yellowish-pink colored with a convoluted D-Glucuronate Arbutin + Growth at BO^'C + surface. The streak is shiny in the center to dry and 50% GlucoseGrowth at 3TC V powdery at the periphery; true mycelium forms at the yeast extract agar edge of the colony. After one month the colony is peach- Co-Q: 10 (Yamada et al. 1983, Nakase and Suzuki 1986d). colored. By 3 weeks, there is an extensive formation of Mol% G + C: 63.5 (BD: Holzschu et al. 1981); 62.0, 64.0 (BD: Storck et al. 1969). mycelium with clamps and teliospores. Cell hydrolyzates: Mannose, glucose, galactose, fucose (von Arx and Weijman 1979).

Dalmau plate culture on corn meal agar: After 5 days at 25''C, there are budding yeast cells as well as cells with simple and branched sterigmata bearing ballistoconidia; extensive true mycelium with clamp connections and spherical teliospores, 10-15 |im in diameter may be produced. Formation of ballistoconidia: Asymmetric, reniform, (2^)x(5-10)|im, ballistoconidia form on simple or branched sterigmata after 3 days on malt agar or corn meal agar. Life cycle: As described by Laffin and Cutter (1959a,b) the species is homothallic. The yeast phase is diploid; reduction division occurs with the formation of dikaryotic hyphae with clamp connections. Karyogamy occurs in the teliospore. Germination of the teliospore results in a holometabasidium with terminal diploid basidiospores. To obtain germination, the cultures were grown on malt agar (22°C) for 4 weeks and then the teliospores were transferred to 2% agar where they germinated after 10 days of incubation. Fermentation: absent.

Origin of the strains studied: Pustule ofPhmgmidium rubi-idaei (DC.) Karst. on a living leaf of 7?wZ?w5 idaeus L. in the State of Washington, U.S.A. (1) (Nyland 1949); fodder yeast (1) from Windisch 1949. Type strain: CBS 5470 (Nyland 1949). Comments: The majority of the strains labeled Sporobolomyces holsaticus that we studied were found to mate with strains of Sporobolomyces salmonicolor One exception was the type strain oiS. holsaticus (CBS 1522), which was maintained as a separate species in the last edition of "The Yeasts". Subsequent studies of CBS 1522 concluded that S. holsaticus is a synonym of Sporidiobolus johnsonii based on morphological and physiological similarities, DNA-DNA hybridization (93.1%) between the type strains of these species (Boekhout 1991a), the electrophoretic pattern of enzymes (Yamazaki and Komagata 1983a) and nucleotide sequence analysis (Fell et al. 1992). CBS 1522, therefore, represents an anamorphic strain of S. johnsonii, viz., hyphae with clamps and teliospores are not formed. 87.2. Sporidiobolus pararoseus Fell & Tallman (Fell and Statzell-Tallman (1981) Anamorph: Sporobolomyces shibatanus (Okunuki) Verona & Ciferri Synonyms: Torula shibatana Okunuki (1931) Sporobolomyces pararoseus Olson & Hammer (1937) nom. nud. Sporobolomyces shibatanus (Okunuki) Verona & Ciferri (1938)

87. Sporidiobolus Nyland / A. Statzell-Tallman and J. W Fell Sporobolomyces marcillae Santa Maria (1958b) Prosporobolomyces marcillae (Santa Maria) Novak & Zsolt (1961) Sporobolomyces ruber Yamasaki & Fujii (1950) Sporobolomyces carnicolor Yamasaki & Fujii (1950) Sporobolomyces japonica lizuka & Goto (1965)

Growth in 5% malt extract: After 3 days at 25°C, there is considerable variation in cell shape; the cells may be ovoidal, spherical, elongate or allantoid, (3-9) x ( 4 21)|jim. They occur singly, in pairs, small clusters and short chains. A thin ring and light to moderate sediment are present. After one month a thick corrugated pellicle may form and the sediment may be heavy. Growth on 5% malt agar: After one month at 2 5 T , the streak culture is pale salmon, grenadine, coral-red or peach-red in color with a rugose or smooth, glossy or semiduU surface. The texture is soft. The cross section is low convex to flat and the border entire, occasionally with a mycelial fringe. Dalmau plate culture on corn meal agar: The strains vary considerably; pseudo- and true hyphae are absent in some strains, whereas other strains will produce light to extensive amounts of both. Formation of ballistoconidia: Although some strains form ballistoconidia on corn meal agar, Phaff (1970c) found that a medium, which consisted of Yeast Nitrogen Base agar with either ribose, glycerol or glucono-6lactone was more suitable for ballistoconidium production for other strains. The ballistoconidia are asymmetric, measuring (2-5) x (5-12) |im, with 1-5 or more sterigma. Life cycle: When compatible mating types were mixed on corn meal agar at 22°C, conjugation was followed by formation of hyphae with hook-to-peg clamps and teliospores. The latter are elliptic-fusiform or spherical, (9-13)x(13-24)|im, occurring singly, in pairs or rarely in chains of three. After 35 days on corn meal agar at 22°C, the teliospores germinated on the corn meal agar by forming branched hyphae with buds. Continued growth of either the buds or hyphae was not successful. Two mating types were found, suggesting a unifactorial mating system with two alleles. One strain, identified as S. pararoseus (CBS 5541), produced extensive true mycelium with elliptic-fusiform to spherical teliospores, (10-12) x (12-20) jjim. The teliospores were single and in chains, located intercalarily and terminally on the hyphae and on short lateral branches. Clamp connections were not formed. This self-sporulating strain did not mate with either the Al ox A2 mating types of S. pararoseus. DNA sequence analysis indicates that this strain maybe related to Sporobolomyces roseus rather than to S. pararoseus. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s + + + +

-

+ +

-

V V

-

w V V

-

695

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

s s

V

-

+ V

+ + + V V V

-

+

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate -

5 -Keto-D-gluconate n Urease + Gelatin liquefaction Saccharate D-Glucuronate Growth at 30''C + 50% GlucoseGrowth at 3 7 ^ yeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 50.0-53.7 (7^: Boekhout 1991b); 51.5-55.0 (BD: Storck et al. 1969). Cell hydrolyzates: Glucose, mannose, galactose and fucose (Gorin and Spencer 1970).

Origin of the strains studied: Sources include soil (Okunuki 1931), air (Olson and Hammer 1937), flower, plants and seawater. Complementary mating types: CBS 491, mating type A2, and CBS 499 (Olson and Hammer 1937), mating type Al, from air in a dairy, USA, isolated by B.W. Hammer. Additional mating strains: CBS 484, mating type Al, type strain of Sporobolomyces pararoseus, from air, USA, B.W. Hammer; CBS 4216, type strain of Sporobolomyces ruber Yamasaki & Fujii, mating type A2', CBS 5329 and CBS 5330, mating type A2, from seawater in Atlantic Ocean, USA by D. Ahearn. Self-sporulating strain: CBS 5541, from flower of Fumaria sp., France by J. Villoutreix. Type strain: CBS 491, type strain of Sporobolomyces shibatanus, mating type A2, from soil, Japan, isolated by K. Okunuki. Comments: Two strains identified as Sporobolomyces pararoseus, CBS 4217 (type strain of S. marcillae and CBS 2637, did not mate with either of the mating types of S. pararoseus. Storck et al. (1969) found that the G + C content of the type strain of S. pararoseus (CBS 484) is 51.5%, whereas the G + C content of CBS 4217 is 55.0% and CBS 2637 is 60.5%. Apparently these two strains belong to one or more species distinct from S. pararoseus.

696

VIb. Descriptions of teleomorphic basidiomycetous genera and species

87.3. Sporidiobolus ruineniae Holzschu, Tredick & Phaff (1981) Synonyms: Sporobolomyces coprophilus Sugiyama & S. Goto (1967) Sporidiobolus ruineniae Holzschu, Tredick & Phaff var. coprophilus Kurtzman & Fell (1991) Sporidiobolus microsporus Higham (1970) nom. nud.

Growth in 5% malt extract: After 3 days at 25°C, the cells are cylindrical or ovoidal, (2-9) x (6-13) |im, and single or in pairs. Some cells have sterigmata with several bud scars. Short hyphal strands developfi*omsingle cells. A light ring and a moderate pellicle may be present. Hyphae with clamp connections and spherical teliospores (4-20 jJim in diameter) develop. Growth on 5% malt agar: After 3 days at 25°C, the streak culture is cream to light buff or peach-colored (see comments). The surface is smooth, rugoid, slightly raised, and slightly glistening. The border is entire with tufts of mycelium formed by some strains; clamp connections (incomplete, rarely complete) may or may not be present on the mycelium; teliospores may occur. After one month, there is a more extensive development of hyphae and teliospores and the colony is orange-luteolus or peachred. Dalmau plate culture on corn meal agar: After 6 days at 25°C, true and pseudomycelium may be present. By 6 weeks, teliospores develop on true mycelium. Complete or incomplete clamp connections may be present; spherical teliospores are present that resemble those on malt agar. Formation of ballistoconidia: Asymmetric ballistoconidia, (2-7)x(6-10)(im, form on most growth media, with the exception of one strain (CBS 5811, Sporobolomyces coprophilus) that appears to have lost this ability.

Fig. 352. S. ruineniae, CBS 5001. Teliospore, which formed from cells grown on corn meal agar at IQ^'C after 5 weeks, germinated after soaking in deionized water for 5 weeks. The 3-celled metabasidium is attached to the teliospore by an aseptate basal cell. Basidiospores, often in clusters of 2-4 cells, are on small pedicels. Bar= 10|im.

2-A weeks in distilled water and transferred to 2% agar for 3 days. The club-shaped phragmometabasidium lacked the aseptate basal cell present in the other two species (Fig. 354); the resulting basidiospores formed in two to four-spore clusters on a short pedicel and developed a parental-type life cycle: teliospores formed on hyphae that lacked clamp connections. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + V

+ +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ s

-

+ + + +

Life cycle: The species is homothallic; teliospores develop from single cells in the absence of mating. + S. ruineniae and S. microsporus strains develop hyphae + with complete and incomplete clamp connections and + germination of teliospores at 19''C results in a metabasidium that connects to the teliospore by an aseptate stalk, + V which ranges in length from 3-26 |im. Rates of teliospore + w s germination vary. Teliospores from a streak culture of a s S. ruineniae strain (Figs. 352, 353) on corn meal agar V + for 1.5 to 5 weeks, which were moved in a block of + agar to distilled water for 4-12 weeks, germinated within 3 days of being transferred onto 2% aqueous agar; the Additional assimilation tests and other g;roi S. microsporus strain teliospores, from a streak on a characteristics: Starch formation corn meal agar Dalmau plate for 8 weeks, were soaked 2-Keto-D-gluconate 5 -Keto-D-gluconate Urease + for 2 weeks in distilled water; germination occurred Saccharate Gelatin liquefaction + after one week on 2% agar. The metabasidia were two- D-Glucuronate Growth at 30°C + w/Growth at 3 7 T and four-celled with lateral and terminal basidiospores. 50% GlucosePloidy of the basidiospores was not determined. The third yeast extract agar strain, S. coprophilus, produced teliospores on mycelium 10% NaCl/5% glucose s Co-Q: 10 (Nakase and Suzuki 1986d). that lacked complete clamps, although sparse incomplete Mol% G + C: CBS 5811, 64.5; CBS 5001, 64.9 (BD: Holzschu et al. clamps were present. Teliospore germination occurred in 1981; BD: Kurtzman and Fell 1991). a 7-week-old culture on malt agar, which was soaked for Cell hydrolyzates: Xylose absent (Suzuki and Nakase 1988a).

87. Sporidiobolus Nyland/A. Statzell-Tallman and J.W. Fell

Fig. 353. S. ruineniae, CBS 5001. Teliospore, which formed on com meal agar at 19''C after 5 weeks, germinated after soaking in deionized water for 5 weeks. The 2-celled metabasidium, is attached to the teliospore by an aseptate basal cell. Basidiospores, often in clusters of 2 ^ cells, are on small pedicels. Bar= 10 ^xm.

697

contrast the S. coprophilus strain has incomplete clamp connections (very rarely complete) and the few teliospores that germinated revealed a metabasidium that lacks a connecting stalk (Fig. 354). S. microsporus differs from the other strains by colony color, i.e., after 3 days on malt extract S. microsporus is cream to buff and at one month is orange-luteolus; the other strains are peach-colored with an increase in intensity to peach-red. S. microsporus does not utilize maltose; the other strains utilize maltose, sometimes slowly. Nucleotide sequence studies of a partial region of the LSU rRNA (Fell et al. 1992) indicate that the S. ruineniae and S. coprophilus strains have identical sequence alignments and that S. microsporus differs by 11 base positions (~4% of positions sequenced). This would suggest that S. microsporus is a distinct species. Kurtzman and Fell (1991) examined the G + C contents of S. ruineniae (64.9%) and S. coprophilus (64.5%) and determined that DNA reassociation between the two strains was 63% which led them to suggest that the two strains represented varieties of the same species. As far as we are aware there have not been any G + C content or hybridization studies on the S. microsporus strain. The nucleotide sequence studies indicate that Rhodosporidium fluviale is related to these three species; the S. ruineniae strain differs from R. fluviale at nine base positions. Species separations oiR. ruineniae and R. fluviale are confirmed by 0%) DNA hybridization (Fell et al. 1992). The S. microsporus strain appears more closely related to R. fluviale, differing at five base positions; DNA hybridization studies between these two strains have not been reported.

Fig. 354. S. ruineniae (S. coprophilus type strain), CBS 5811. Teliospore formed on malt agar after 7 weeks and then soaked in deionized water for 2 weeks. Germination to a club-shaped metabasidium lacking an aseptate 87.4. Sporidiobolus salmonicolor Fell & Tallman basal cell occurred within 4 days on 2% aqueous agar. Bar= 10 (im.

(Fell & Statzell-Tallman 1981)

Origin of the strains studied: Four strains of S. ruineniae (CBS 4998, 4999, 5000 and 5001, type) were isolated from the phyllosphere of tropical foliage of Malphiga coccigera at Bogor, Indonesia (Ruinen 1963). The type strain of Sporobolomyces coprophilus (CBS 5811) was isolated from goat dung in Pakistan (Sugiyama and Goto 1967). This strain lost the ability to produce ballistoconidia and was considered to be a strain of Rhodotorula graminis (Phaff and Ahearn 1970). Sporidiobolus microsporus (CBS 7041) was studied by June Higham (Higham 1970), a student of R.J. Bandoni, however, a formal description was not published (Bandoni, personal communication). Type strain: CBS 5001 (isolated by Ruinen 1963). Comments: The three species (S. ruineniae, S. coprophilus and S. microsporus) have been placed in synonomy (Boekhout 1991a) based on their similar physiological and morphological properties. Our morphological and molecular studies suggest that this decision should be examined in greater detail. S. ruineniae (Figs. 352, 353) and S. microsporus (no photograph included) strains have complete and incomplete clamp connections on the hyphae and their metabasidia form on stalks. In

Anamorph: Sporobolomyces salmonicolor (Fischer & Brebeck) Kluyver & van Niel Synonyms: Rhodomyces kochii von Wettstein (1885) Blastoderma salmonicolor Fischer & Brebeck (1894) Monilia kochii (von Wettstein) Saccardo (1892) Zygonema kochii (von Wettstein) de Mello (Froilano de Mello and Gonzaga Fernandes 1918) Candida kochii (von Wettstein) Basgal (1931) Sporobolomyces salmonicolor (Fischer & Brebeck) Kluyver & van Niel (1924) Prosporobolomyces salmonicolor (Fischer & Brebeck) Novak & Zsolt (1961) Aessosporon salmonicolor van der Walt (1970f) Sporobolomyces odorus Derx (1930) Sporobolomyces odorus Phaff (1970e) Sporobolomyces photographus Biourge ex Ciferri & Redaelli var. odorus (Derx) Verona & Ciferri (1938) Pseudomonilia rubicundula Okunuki (1931) Sporobolomyces rubicundulus (Okunuki) Verona & Ciferri (1938) Sporobolomyces hispanicus Pelaez & Ramirez (1956a) Prosporobolomyces hispanicus (Pelaez & Ramirez) Novak & Zsolt (1961) Sporobolomyces coralliformis Tubaki (1958) Sporobolomyces salmonicolor (Fisher & Brebeck) Kluyver & van Niel YSLLfischeriiMisra & Randhawa (1976) Sporobolomyces philippoui Krasil'nikov (1933) Sporidiobolus ueronae Balloni, Florenzano & Materazzi (1974)

698

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Fig. 355. S. salmonicolor, CBS 2630xCBS 5937. Opposite mating type cells were mixed on corn meal agar at 22°C; the resulting teliospores germinated within 18 weeks to a metabasidium connected to the teliospore by an aseptate basal cell. Bar= 10|im.

Fig. 356. S. salmonicolor CBS 2630xCBS 5937. Opposite mating type cells were mixed on com meal agar at IT'C; the resulting teliospores germinated within 18 weeks to a metabasidium connected to the teliospore by an aseptate basal cell. Bar= 10 [im.

Growth in 5% malt extract: After 7 days at 25°C, there may be a light to thick ring; when present the pellicle ranges from a thin film, or small islets, to thick and corrugated. Film and pellicle colors are off-white, lightsalmon, yellowish-pink and peach. After one month the ring and pellicle have increased in size.

from the metabasidium. Endospores may be present in the metabasidium.

Growth on 5% malt agar: There is considerable strain variation in cell and colony morphology. After 7 days at 25°C, the cells are ovoid to elongate, (2-12) x ( 3 35) [im, single and in pairs; pseudo- and true hyphae may occur. Cells and hyphae may have sterigmata up to 50 |i-m or more in length. The streak cultures are shades of yellowish-pink, salmon and peach. The edges may be entire or heavily myceliated. The surface is smooth, powdery or deeply corrugated. The texture varies from pasty to tough. After one month, there is little change in the cell size, while the streak cultures become deeper in color. Dalmau plate culture on corn meal agar: There is considerable strain variation, ranging from an absence of pseudo- and true hyphae to extensive growth of both types of hyphae. Formation of ballistoconidia: Most strains form kidney-shaped, (3-5)x(5-10)|im, balHstoconidia on corn meal agar. Some strains produce ballistoconidia on malt agar. Life cycle: The species is heterothallic. Conjugation of opposite mating types on corn meal agar at 22°C results in the formation of true mycelium with clamp connections at the septa. As noted by Bandoni et al. (1975) the mating reactions are not consistent, due possibly to such factors as types of media, age and condition of the strains. Two mating types have been recorded, indicating that the species is unifactorial with two alleles. The teliospores are spheroidal (10-14) ^m or ovoidal (8-10)x(10-17) |im, terminal, intercalary and lateral on hyphal branches. The teliospores germinate after 18 weeks on corn meal agar at 22°C. The metabasidium is one-celled (5-7)x(l3-47) |im and is borne on a connecting cell (l-3)x(3-13)|im (Fig. 355). One to two basidiospores form terminally on the metabasidium (Fig. 356). Hyphae may develop

Fermentation: absent.

Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V

+ V V

+

V V

V

s V V

s

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

Urease Gelatin liquefaction Growth at 30''C Growth at 37"C

+

+ V

-

+

-

+ + V V

+ s V

-

+ + Additional assimilation tests and other growth characteristics: n Starch formation 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% Glucoseyeast extract agar 10% NaCl/5% glucose

n +

-

V V

-

Co-Q: 10 (Nakase and Suzuki 1986d). Mol% G + C: 63.5-65.0 (BD: Storck et al. 1969); 62.0 (BD: Holzschu et al. 1981). Cell hydrolyzates: Mannose, glucose, galactose, and fucose 0^on Arx and Weijman 1979); xylose absent (Suzuki and Nakase 1988a).

Origin of the strains studied: Aessosporon salmonicolor CBS 5937 (type strain, mating type Al); CBS 5937.3 (v47); Sporobolomyces coralliformis CBS 4209 (type), A2\ Sporobolomyces hispanicus CBS 2873 (type), Al\ Sporobolomyces odorus CBS 483 (type), A2\ CBS 487 {Al)\ Sporobolomyces salmonicolor CBS 490 (type), Al\ S. salmonicolor \diV. fischerii CBS 6832 (type), Al\ CBS 1039 {Al)\ CBS 2630 (^2); strains UBC 949 {Al\ UBC

87. Sporidiobolus Nyland / A. Statzell-Tallman and J. W Fell

950 (Al), UBC 958 (A2) from R.J. Bandoni; strains 5Y (Al) and 7Y (Al) from S.A. Meyer. Complementary mating types: CBS 490, mating type Al, and allotype strain CBS 2630, mating type A2. Type strain: CBS 490, type strain of Sporobolomyces salmonicolor (Kluyver & van Niel 1924), mating type AL Comments: Strains were isolated from sources as diverse as tanning fluid (Pelaez Campomanes and Ramirez Gomez 1956a), seawater, atmosphere (Bandoni et al. 1971), mixed cultures (Kluyver and van Niel 1924); humans (Misra and Randhawa 1976, van der Wah 1970f) and plants (Tubaki 1958, Derx 1930). Boekhout (1991a) reported a 75.8% DNA-DNA similarity between the type strains of Sporobolomyces johnsonii and Sporidiobolus salmonicolor and consequently placed S. salmonicolor into synonymy with S. johnsonii. LSU rRNA sequence analyses (Fell et al. 1992) of one mating strain of S. salmonicolor (UBC 949) and the type strain of S. johnsonii (CBS 5470) found that the two strains differed at 5 nucleotides (2% of the sequence examined). This result agrees with the conclusion that the two species are closely related, but questions the synonymy, and therefore we have retained the two taxa as separate species.

699

Comments on the genus Nyland (1949) described a ballistoconidial yeast with clamp connections and thick-walled chlamydospores as the genus Sporidiobolus, a genus that represents the teleomorphic states of Sporobolomyces. The importance of this first observation of a sexual state for the basidiomycetous yeasts was probably overlooked as the genus was not mentioned in Lodder and Kreger-van Rij's (1952) review. With the discovery of a sexual state in Rhodotorula (Banno 1967), the significance of Sporidiobolus became apparent and Phaff (1970e) presented a detailed discussion of the genus and included a second species {S. ruineniae) in the genus. As currently viewed, the genus consists of the pigmented, teliospore- and ballistoconidia-forming members of the Sporidiales. There are four accepted species, which, based on nucleotide sequence analysis (Fell et al. 1992, 1995), are closely related. Species are differentiated by the method of teliospore formation (self-sporulation or heterothallic) and a limited number of assimilation tests (Table 71). Increased interest in the ballistoconidia-forming yeasts, as evidenced by the number of recently described species of Sporobolomyces, should result in the discovery of their teleomorphic states and consequently the addition of new species of Sporidiobolus.

700

VIb. Descriptions of teleomorphic basidiomycetous genera and species

88. Sterigmatosporidium

Kraepelin & Schulze

A. Statzell-Tallman Diagnosis of the genus Growth on solid medium is white to cream-colored, either butyrous or rough. Both yeast and mycelial phases occur. Haploid yeast cells are polymorphic, ovoid to cylindrical, and reproduce by polar budding, usually on spiny denticles or thin sterigmata with the septa at the distal end. Pseudohyphae are present. Heterothallic sexual reproduction occurs following conjugation of haploid cells of opposite mating types; dikaryotic hyphae with clamp connections form; clavate or lageniform cells develop with whorls of terminal dikaryotic basidialike structures on clamps. Septal pores have not been examined. Self-sporulating strains occur which develop dikaryotic hyphae with clamp connections. Teliospores are absent. Monokaryotic haustorial branches form from subglobose cells on the hypha. Fermentation is absent. D-Glucuronate and mj^o-inositol are assimilated. Starch-like compounds are synthesized. Diazonium blue B and urease reactions are positive. Coenzyme Q-10 is present. Xylose is present in whole-cell hydrolyzates. Type species Sterigmatosporidium polymorphum Kraepelin & Schulze Species accepted 1. Sterigmatosporidium polymorphum Kraepelin & Schulze (1982) Systematic discussion of the species 88.1. Sterigmatosporidium & Schulze (1982)

polymorphum

Kraepelin

Growth in 5% malt extract: After 3 days at 20°C, the cells are polymorphic, from oval, cylindrical, elongate to irregular and measure (1.1 -3.7) x (1.6-10.1) |im. They occur singly, or bud on spiny denticles (Fig. 357) or sterigmata (Fig. 358) which are 0.5-3.7 ^im long and 0.5 |im wide. New buds, which are ovoidal to spheroidal, separate from the distal end of the sterigmata or occasionally a sterigma breaks in the middle. A sediment is present. After one month, a sediment and sometimes islets or a pellicle are present.

Fig. 357. S. polymorphum, CBS 8089xCBS 8090. Cell with spiny denticles formed on sympodial ramification seen in a mix of opposite mating types. Bar= 10 [im.

Growth on 5% malt extract agar: After one month at 20°C, the streak colonies of the haploid and the dikaryon are white to cream-colored, raised, butyrous, smooth with buds forming on short stalks, or the colonies may be rugoid in which the buds form on long sterigmata (Fig. 358). The margin is entire, with the haploid strain fringed by pseudomycelium and the dikaryon fringed with both pseudomycelium and true mycelium with clamps at each septum. Dalmau plate culture on corn meal agar: After one month at 20°C, pseudomycelium is formed by the haploid strains and dikaryotic strains. True mycelium is also formed by the dikaryotic strain.

Fig. 358. S. polymofphum, CBS 8089 xCBS 8090. Formation of blastoconidia (arrow) on long sterigmata. Bar = 25 \\m.

88. Sterigmatosporidium Kraepelin & Schulze /A. Statzell-Tallman

701

germination

^ ^

karyogamy

dikaryotic phase D

haploid phase

Fig. 360. S. polymorphum. CBS 8089 x CBS 8090. Hypha with immature lageniform cell (1) on clamp and chlamydospores (2). Lageniform sporogenous cells on clamps with terminal whorls of clamps (3). Bar=10|im.

plasmogamy Fig. 359. S. polymorphum. Life cycle proposed by Kraepelin and Schulze (1982), pg. 479. (A) Haploid cells on long sterigmata. (B) Conjugation of haploid cells. (C) Dikaryotic conidia bud from dikaryotic hypha. (D) Chlamydospore-like cells with paired nuclei form with clamps on hypha. (E) Monokaryotic haustoria form from subglobose cells which develop on clamps from the dikaryotic hypha. (F) Refractive cells on whorl of clamp-like structures on lageniform sporogenous cell with basal clamp. (G) Refractive, dikaryotic basidia-like structures. (H) Haploid cells bud from basidia-like cells.

Life cycle (from Kraepelin and Schulze 1982): Both haploid and dikaryotic self-sporulating strains may be isolated from nature. Mixing of opposite mating type haploid cells (Fig. 359A) on malt extract agar or corn meal agar results in conjugation (Fig. 359B) and the formation of hyphae with clamps at the septa. Lageniform to subglobose sporogenous cells form laterally or terminally with a clamp at the basal septum (Figs. 359F, 360). These sporogenous cells develop whorls of an indeterminate number of cells, (2.9-3.8) x (4.8-6.7) jim, possibly sexual, each on a clamp-like or a stalk-like structure (Figs. 361, 362). In the life cycle as presented by Kraepelin and Schulze (1982) the nuclei in these refractive, dikaryotic, basidialike structures (Fig. 359G) are transversely paired. The authors suggested that karyogamy and meiosis occur in these cells, not in typical basidia, and that haploid cells of the two parental mating types bud from these sexual (?) cells (Fig. 359G,H). Self-sporulating strains may be derived from budding of dikaryotic conidia from

Fig. 361. S. polymorphum. CBS 8089 x CBS 8090. Refractive cells formed • on whorl of clamp-like or stalk-like structures (arrow) on lageniform sporogenous cell with basal clamp. Bar= lO^im.

Fig. 362. S. polymorphum. CBS 8089xCBS 8090. Refractive cells formed on whorl of clamp-like or stalk-like structures on lageniform sporogenous cell with basal clamp. Bar= 10 ^im.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

702

the dikaryotic mycelium (Fig. 359C). Spherical, refractive chlamydospore-like cells, (4.3^.8)x(4.3-5.8) ^im, with paired nuclei form with clamps on the hyphae (Figs. 359D, 360); germination of these cells is unknown. Monokaryotic haustoria form from subglobose cells which develop with clamps (Fig. 359E) from the dikaryotic hyphae. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + s + + +

-

+ + + + + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ w s s + + + + + +

-

+ + +

-

Additional assimilation tests and other g[roi characteristics:

2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% Glucoseyeast extract agar 10% NaCl/5% glucose

+ + s +

s

Starch formation Urease Gelatin liquefaction Growth at WC Growth at 37T

+ +

-

w

-

Co-Q: 10 (Yamada and Banno 1984b). Mol% G + C: 51.96 (BD: Kurtzman 1990a). Cell hydrolyzates: Xylose is present (Yamada et al. 1988a).

Origin of the strains studied: Gelatinous deposits on drenched pitwood planks in old ore mine, West Germany, Kraepelin, 1980. Complementary mating types: CBS 8089 (Kraepelin strain Ra 18a) and CBS 8090 (Kraepelin Ra 18a). Type strain: CBS 8088 (Kraepelin strain Ra 18), dikaryon. Comments on the genus The formation of blastoconidia on sterigmata initially linked S. polymorphum to Sterigmatomyces (Fell et al. 1984a). However there was little nucleotide complementarity (Kurtzman 1990a) between this species and the species accepted in the genus Sterigmatomyces. Subsequently, nucleotide sequence analyses (Gueho et al. 1989, 1990, Fell et al. 1995), and electrophoretic comparisons of enzymes (Yamada et al. 1986a) indicated a close relationship with the genus Fellomyces, which clusters with the tremellaceous fungi. Further investigations on the life cycle and the relationship to other tremellaceous fiingi are required.

703

89. Tilletiaria Bandoni & Johri / T. Boekhout

89. Tilletiaria Bandoni & Johri T. Boekhout Diagnosis of the genus Hyphae are septate, narrow, hyaline, and monokaryotic with retraction septa. Septal pores are primitive dolipores without parenthesomes. Ballistoconidia are allantoid and falcate, and formed on sterigmata. Chlamydospores are brown. Colonies are tough and grayish-brown. Teliospores occur intercalarily or terminally, and are echinulate, brown, and germinate with 1-4-celled basidia. Clamp connections are absent. Sugars are not fermented. Urease reaction is positive. Xylose is absent from whole-cell hydrolyzates. Major ubiquinone is Q-10. Type species Tilletiaria anomala Bandoni & Johri Species accepted 1. Tilletiaria anomala Bandoni & Johri (1972) Formation of teliospores: Teliospores are subglobose, brown, echinulate, somewhat thick-walled, (6.089.1. Tilletiaria anomala Bandoni & Johri (1972) 12.5) X (6.0-12.5) |im, and with spines usually up to Growth on 5% malt extract agar: After 7 days at ca. 3.0 |im long (Fig. 363). Germination of teliospores oc25°C, hyphae are narrow, 1.0-3.5 jJim wide, usually largely curs when transferred to water agar (1-3 days at 20-25°C), lysed with retraction septa, and with lateral sterigmata. forming 1 ^-celled basidia which form ballistospores Chlamydospores are subglobose to ellipsoidal, brown, (Bandoni and Johri 1972). The species is homothallic. (6.0-20.0)X(5.0-8.0) |im. Colonies are firm to tough, pruinose, dull dark grayish-brown, and with the margin Fermentation: absent. entire or eroded. Systematic discussion of the species

Growth on the surface of assimilation media: Islets, a ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, hyphae are abundantly present. Aerobic growth is pale yellow-brown, ochraceous-brown to dark brown, firm, flat, irregular to pustulate, and the margin entire, eroded or crenulate. Formation of ballistoconidia: Ballistoconidia are allantoid to falcate, (5.0-15.0)x(1.5-4.0) |im (Fig. 363).

Assimilation (17**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+ + + + +

-

+ +

-

+

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

-

+

-

+

-

n

-

+

Additional assimilation tests and other growth characteristics:

Fig. 363. T. anomala, CBS 436.72. Ballistoconidia and teliospores on morphology agar. Bar = 5 |im.

2-Keto-D-gluconate Nitrite + 50% Glucose Growth at 25T + Starch formation Growth at 30°C + Urease + Growth at 35°C Co-Q: 10, CBS 436.72 (Boekhout 1987, Boekhout et al. 1992a). Mol% G + C: 62.9, CBS 436.72 {T^: Boekhout et al. 1992b).

704

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Origin of the strain studied: CBS 436.72 (ATCC 24039, UBC 951), decaying wood, RJ. Bandoni, Canada. Type strain: UBC 951. Comments on the genus Tilletiaria is characterized by the presence of narrow hyphae without clamp connections, allantoid to falcate ballistoconidia, and brown, echinulate teliospores (Bandoni and Johri 1972, Boekhout 1991a). Prior to teliospore

formation, outgrowths of two adjacent cells are formed near a septum, which after ftision, give rise to the teliospore. Tilletiaria was tentatively placed in the Tilletiales, because of the presence of teliospores, basidiospores that are ballistospores, and from morphological, biochemical and ultrastructural similarities (Boekhout et al. 1992a). The dark colonies hampered reading of the Diazonium blue B test, which is expected to be positive.

90. Tremelloid genera with yeast phases / R.J. Bandoni and T. Boekhout

705

90, Tremelloid genera with yeast phases Fibulobasidium Bandoni, Holtermannia Saccardo & Traverse, Sirobasidium de Lagerheim & Patouillard, Tremella Persoon, Trimorphomyces Bandoni & Oberwinkler R.J. Bandoni and T Boekhout 1. Introduction The Tremellales and Filobasidiales are the only known taxa with both doHpore septa and yeast states. As noted in the introduction to heterobasidiomycetes, biochemical characteristics suggest a very close relationship of the two groups of fungi and maintaining the two as separate orders is primarily a matter of convenience here. The Tremellales in this sense includes only three families, the Tetragoniomycetaceae, Sirobasidiaceae, and Tremellaceae. The families Filobasidiaceae, Syzygosporaceae and Rhynchogastremaceae are presently placed in the Filobasidiales. Although budding was first observed and illustrated in Tremellaceous fimgi by Brefeld (1888) and by Moller (1895), later students mostly mentioned this trait as one of several methods of basidiospore germination, i.e., yeast states were not discussed. Dimorphism in heterobasidiomycetes, other than in smuts and their relatives, remained essentially unknown until the 1960's, when studies were carried out on species oi Tremella Persoon (Bandoni 1961, 1963, Kobayasi and Tubaki 1965). 2. Classification Taxa in two of the three families in the Tremellales, Tremellaceae s. str. (Bandoni 1984) and Sirobasidiaceae, have known yeast states. Tetragoniomyces uliginosus (Karsten) Oberwinkler & Bandoni, the only species in the Tetragoniomycetaceae, has deciduous basidia that function as disseminules and germinate directly (Oberwinkler and Bandoni 1981); the species is not considered further here. Basidia in the Sirobasidiaceae and Tremellaceae produce basidiospores, ballistospores and yeast states. All taxa in the order are thought to be mycoparasites, but the evidence for this largely rests upon association with specific fungi in nature, and experimental evidence for parasitism is lacking for most taxa. The Sirobasidiaceae and Tremellaceae are not sharply delimited morphologically, as noted below, and analyses of other types have not yet dealt with sufficient species to be of help at this level. 2.1. Life history A life-history diagram typical of many Tremellales is shown in Fig. 364; it is based primarily upon studies of Tremella mesenterica Retzius:Fries (Bandoni 1963, 1965, Wong et al. 1985). Information from cultural studies of other taxa has been incorporated, including those of T globispora Reid, T. rhytidhysterii Bezzera & Kimbrough (Bezerra and Kimbrough 1978), Fibulobasidium inconspicuum Bandoni (Bandoni 1979), and

Trimorphomyces papilionaceus Bandoni & Oberwinkler (Oberwinkler & Bandoni 1983). In culture, isolated basidiospores of heterothallic species give rise to yeast states, with mycelia typically developing only when compatible strains are paired. Pairing of suitable cells yields a rapid response to complementary pheromones; budding ceases, conjugation tubes develop and fuse, and the dikaryotic hyphal state is initiated. Under conditions suitable for fruiting, basidiome development commences soon after dikaryon initiation in T globispora and Sirobasidium magnum (i.e., a long assimilative period is not required before basidiocarp production commences (Brough 1974, Flegel 1976). The basidiocarp typically is gelatinous and 2-4-celled basidia are produced in an amphigenous surface hymenium. Each basidial cell produces a fiisiform, passively released spore (in Sirobasidiaceae) or a tubular epibasidium tipped by a sterigma and ballistospore (in most Tremellaceae). Basidiospores of both groups can germinate either by ballistospore production or by budding. Not infrequently, closely situated compatible basidiospores conjugate directly on culture media and, presumably, also in nature. Differences in life histories and development are found in 1) dikaryotic hyphae, 2) basidiocarp features, 3) basidia, 4) basidiospore germination, 5) yeast states and conjugation, and 6) conidial production, as follows. 2.2. Dikaryotic hyphae With few exceptions, dikaryotic hyphae in the Tremellales have clamp connections and characteristic haustorial branches. The latter, first recognized by Olive (1947) in Tremella mycophaga var. obscura Olive, and designated by him as haustoria, are known in many species of that genus. They have not been reported in Sirobasidium and are unknown in some species of Tremella. Each haustorial branch consists of a basal cell and filament; the latter contacts hyphal walls of associated fungi (Olive 1947, Bandoni 1961, Bezerra and Kimbrough 1978, Oberwinkler et al. 1984, Bandoni and Oberwinkler 1983, Metzler et al. 1989), the tip penetrating the wall. Bauer and Oberwinkler (1990a) showed direct, cytoplasm-tocytoplasm connections between haustorial filaments of Tetragoniomyces uliginosus and its host, as well as in Christiansenia pallida Hauerslev (Syzygosporaceae) and its host (Bauer and Oberwinkler 1990b). Zugmaier et al. (1994) have found similar cytoplasmic connections between haustorial filaments of Tremella mesenterica and several asso9iated basidiomycetes. Similar observations were made with T encephala and T mycetophiloides

706

VIb. Descriptions of teleomorphic basidiomycetous genera and species

Fig. 364. Life cycle typical of the majority of Tremellales. (A) Basidiome on wood. (B) Basidia. (C) Basidiospores which can bud (D) or germinate by repetition (E). Budding initiates the yeast phase (F), which can continue indefinitely. If compatible cells are closely situated, complementary pheromones trigger tube development (G), and conjugation (H) occurs. Cells which fail to mate may revert to budding or produce conidia that bud. Conidia are also formed in many basidiomes (I). These include both dikaryotic conidia, which germinate by dikaryotic hyphal production, and haploid conidia which yield a yeast phase.

(as T. mycophaga Martin) with hyphae of Stereum sanguineolentum (Albertini & Schweinitz:Fries) Fries and Aleurodiscus amorphus (Persoon:Fries) Schroter, respectively. In T. mycetophiloides (Fig. 302D), which produces minute basidiomata on the host hymenium, the structures almost certainly function in absorption, as with haustoria in other parasites. Haustorial filaments in Tremella mesenterica can be found attached to hyphae of a variety of basidiomycetes, as noted by Zugmaier et al. (1994) and also to dematiaceous hyphae often growing in the basidiocarps. Contact commonly results in what appears to be a necrotrophic response, and the attack of many different types of hyphae by haustoria of this species may suggest a defensive function in addition to parasitism. In Trimorphomyces papilionaceus and Tremella fuciformis Berkeley, haploid yeast cells can also produce minute haustoria (Fig. 365) in the presence of suitable host hyphae (R.J. Bandoni, unpublished observation). 2.3. Basidiocarp features Tremella penetrans (Hauerslev) Jiilich, T mycophaga Martin var. obscura Olive and several similar taxa grow as endoparasites of other basidiomycetes, e.g., dacrymycetaceous fungi and polypores. They do not have discrete basidiocarps, but produce basidia and often conidia in hymenia of their hosts. Basidiocarps in other species range from tuberculate structures under 1 mm in

diameter in some lichen parasites to extensive masses reaching 20 cm in diameter in Tremella brasiliensis (M511er) Lloyd, T foliaceae Persoon and others. A large size range also occurs in the Sirobasidiaceae. Basidiocarps in Holtermannia Saccardo & Traverso are composed of dense aggregates of erect simple or branched clavarioid structures. Basidiocarps (Fig. 302) are entirely gelatinous in most species, but a tough fleshy core of host hyphae is present in those of Tremella aurantia Schweinitz:Fries, T encephala Persoon (Bandoni 1961), and related taxa, and in some taxa overgrowing ascomycetous stromata, e.g., T moriformis Smith & Sowerby. The structure is monomitic in species described to date; the usually amphigenous hymenial layer consists of basidia and, often, conidiogenous cells. Paraphysoids are present in a few species, e.g., Tremella coalescens Olive and in species closely related to T mesenterica. Two species, T fuciformis and T aurantialba Bandoni and Zang Mu, are cultivated commercially. T aurantialba is grown in dual culture with a species of Stereum (Bandoni and Zang Mu 1990); basidiocarps contain zones of host hyphae as in T aurantia. T. fuciformis (Fig. 365) also appears to be grown in mixed culture commercially, but the literature on the subject is unclear. Basidiocarps of this species are homogeneous and gelatinous; they are often associated with ascomata of Hypoxylon spp.

90. Tremelloid genera with yeast phases / R.J. Bandoni and T. Boekhout

1^1

Fig. 365. T. fuciformis Berkeley. (A) Basidiome on dead branch. Bar=10mm. A-A & RJB 9832, Thailand. Photo courtesy of Dr. T.W. Flegel). (B) Mixed yeast strains of unknown compatibility growing with mycelium of Hypoxylon stygium (Lev.) Sacc, one cell (arrow) with haustorial branch. Bar=10fxm. Cultures: UBC 7122-1(4), Hawaii; 7694-8, China. (C) Haustorial branch arising from short hypha (?haploid) out of focus below cell, the haustorial filament growing along a Hypoxylon hypha (UBC 7122-1, 7122-2, RJB, Thailand). Hypoxylon stygium, UBC 7668-C, RJB, China, used in both cultures shown in (B) and (C).

in nature. Culture studies suggest parasitism of these ascomycetes (R.J. Bandoni, unpublished observation). Xu Biru (1986) reported dependence upon an unnamed associate for fruiting in artificial culture. Cultivated basidiocarps of both species are dried and are widely sold as food; they are also used in traditional medicine in parts of Asia. 2.4. Basidia Basidia in Sirobasidium occur in linear chains, which mature basipetally; those in Fibulobasidium Bandoni are in terminal clusters and are united to one another laterally. Here, basidia form successively, the first from a terminal cell subtended by a clamp connection; the second by direct inflation of that clamp connection, and the third by inflation of the basal clamp of the second, and so on. Basidia in the Tremellaceae are predominantly or all single and terminal, but scattered catenate ones occur in species of Sirotrema Bandoni and, less frequently, in Tremella indecorata Sommerfelt (Bandoni 1984). Tremella simplex Jackson & Martin, T. rhytidhysterii, Sirobasidium brefeldianum MoUer, and a few other taxa have 2-celled basidia, and 2-celled basidia sometimes occur in species characterized by 4-celled basidia. Basidial

form, which is highly variable among species and within any single basidiome, ranges from globose to obovoid, pyriform, clavate, capitate, or subcylindric. The "septation pattern" (see Bandoni 1984, for an alternative concept) is regularly "cruciate" in most taxa, but is highly variable in others. Cylindric basidia with transverse septa are characteristic of Phyllogloea tremelloidea Lowy (F. Oberwinkler, personal communication) and Phragmozenidium mycophilum Oberwinkler & Schneller (Oberwinkler et al. 1990c). Basidia in Sirobasidium spp. are ofl;en fiisiform and with 1 or 3 transverse to diagonal septa, i.e., they can be 2- or 4-celled, each cell budding off a fusiform primary basidiospore. Tremellaceous basidial cells develop tubular extensions (epibasidia), most of which are tipped by sterigmata and bear ballistospores. Passive release of epibasidia or basidiospores occurs either regularly or from time to time in some Tremellas, in Sirotrema spp., in Bulleromyces albus Boekhout & A. Fonseca (Boekhout et al. 1991a), and in the species of Xenolachne Rogers. 2.5. Basidiospore germination The passively released basidiospores of Sirobasidium and Fibulobasidium spp., are probably homologues of epibasidia of most Tremellaceae; they are elongate, typically

708

VIb. Descriptions of teleomorphic basidiomycetous genera and species

fusiform, and germinate either by ballistospore formation or by budding. Basidiospores in the Tremellaceae are mostly ballistospores, but they also germinate either by producing another ballistospore (repetitive germination) or by budding. Details of basidiospore budding differ among the species, and there can also be differences among spores of a single basidiome. Budding can occur directly, with the buds falling free at maturity; in T. mesenterica, primary buds remain attached to the basidiospore (Fig. 290) and produce buds that are freed (as illustrated, e.g., by Ingold 1982a,b, 1985, Bandoni 1987). These two types may be combined with another, in which a short broad tube is produced and buds or sessile budding cells develop at its apex.

synchronously, and conjugation occurs between the two individuals of a pair before their release. A similar development in species of Syzygospora Martin involves conjugation of adjacent buds from paired (separate) conidiogenous cells, but no dikaryotic yeast states are known in that group. In heterothallic species of Tremella, Sirobasidium, Holtermannia, Fibulobasidium, and Trimorphomyces examined to date, isolated basidiospores germinate by budding (Fig. 290), and this then continues indefinitely under laboratory conditions. Mating is initiated by an allelic pair, the As controlling production of complementary pheromones; independent alleles, the B's (multiple alleles at one locus) determine dikaryon viability (Bandoni 1963, 1965, Brough 1974, Flegel 1976, Wong et al. 1985, Fox 2.6. Yeast states and conjugation and Wong 1990, Okuda et al. 1981). To be compatible, Haploid yeast states in species ofTremella (Figs. 290, 365) pairs must be heterozygous for both sets of alleles, the were noted almost 30 years ago to resemble asporogenous first to initiate the conjugation process, and the second in yeasts classified in the genus Cryptococcus (Kobayasi and order to yield a dikaryotic mycelial phase. Pairing strains Tubaki 1965, Slodki et al. 1966). More recent studies heterozygous for A's and homozygous for B's (common B) of coenzyme Q (Yamada and Kondo 1973, Yamada often results in plasmogamy, yielding cells which are et al. 1983) and carbohydrate composition also show usually vesiculose and abortive. The pheromones prosimilarities between tremelloid and cryptococcoid yeasts. duced by Tremella mesenterica and T brasiliensis are Comparison of the above two characteristics, as well as peptides (Reid 1974, Sakagami et al. 1978a,b, 1979, septal pore ultrastructure, ballistospores, and haustoria Ishibashi et al. 1983a,b) similar to those in species of by Boekhout et al. (1992b) suggests a close relationship Rhodotorula Harrison. When compatible cells are mixed, of Bullera Derx, Bulleromyces Boekhout & Fonseca, short tubes can often be seen after 4 hours; extensive Kockovaella Nakase et al., and Itersonilia Derx to the tube development and short dikaryotic hyphae are visible Tremellales. The classification of Bulleromyces and the within 12 hours. Conjugation tubes in Trimorphomyces Bullera anamorphs definitely should be in the Tremellales, papilionaceus are extremely inconspicuous; in the absence but the relationship of^ Kockovaella and Iters onilia species of host hyphae in culture, conjugation can be detected are not yet firmly established. Similarly, a definite link by the presence of the dikaryotic H-shaped yeast cells. between Tremella and Cryptococcus species has not been Canadian isolates of the species show strong sexual established, i.e., no Cryptococcus strains have been found agglutination (R.J. Bandoni, unpublished observation), but to yield a TremellaAikQ teleomorph. Although Baharaeen this is absent in Japanese strains. and Vishniac (1984) suggested that 25S ribosomal RNA Secondary homothallism, in which binucleate basidhomology data did not support a close relationship, studies iospores give rise directly to dikaryotic hyphae, is known by Gueho et al. (1993), Fell et al. (1992, 1995), and Swann in Sirobasidium magnum and Tremella rhytidhysterii. and Taylor (1993) have found otherwise. Tremella yeasts Many basidia in young basidiomes of S. magnum are examined to date all have the coenzyme Q-10 system, two-celled, and the basidiospores from such basidia proas do closely related species of Filobasidium (Yamada duce fertile mycelia directly (R.J. Bandoni, unpublished et al. 1983) and some species placed in Cryptococcus observation). The two-celled basidia of T rhytidhysterii (Yamada and Kondo 1973). The Q-10 system does not produce basidiospores that give rise to dikaryotic mycelia; appear to be definitive, however, in that it is widespread the latter sometimes dedikaryotize to yield haploid yeast in hemiascomycetes as well as other heterobasidiomycetes states (Bezerra and Kimbrough 1978). Homothallism has (Yamada et al. 1982, 1983). also been found in stocks of T fuciformis from Hawaii An unusual and striking feature is the occurrence of and Panama, although most isolates of the species are a morphologically distinct dikaryotic yeast phase in Tri- heterothallic (Fox and Wong 1990). Many strains in morphomyces papilionaceus (Oberwinkler and Bandoni this species also have limited development of haploid 1983). This phase is initiated following conjugation of hyphae with false clamps and occasional haustorial haploid yeast cells, or it can develop at germination branches. of dikaryotic conidia produced on conidiophores. The dikaryotic yeast phase is usually characterized by colonies 2.7. Conidial production of H-shaped, binucleate cells, that are morphologically Dikaryotic conidia are produced on growing hyphae of identical to the conidia. Dikaryotic cells superficially Tremella mesenterica in culture, as is the production of similar to the haploid ones are produced in rare strains. scattered pockets of haploid budding cells in this species The cells produce pairs of closely situated "twin" buds and others (Brough 1974, Bezerra and Kimbrough 1978).

90. Tremelloid genera with yeast phases / R.J. Bandoni and T. Boekhout

In basidiocarps, conidia may develop before basidia, or concurrently with them in the hymenium of T. mesenterica (Fig. 300). They also occur concurrently with basidia in T. mycetophiloides Kobayasi, T. australiensis Lloyd, and Trimorphomyces papilionaceus (Fig. 304). Hymenial conidia appear to be mainly blastic, but combinations of arthric and blastic development are characteristic of some taxa. Frequent pockets of budding cells within the basidiome tissue, sometimes in the absence of visible basidia and spores, suggests occasional dedikaryotization similar to that occurring in culture. 3. Descriptions and keys to representative yeast states The number of species known in the families Sirobasidiaceae and Tremellaceae exceeds 150, but many species remain to be described in both temperate and tropical

709

regions. Biochemical analyses and morphological studies indicate that Tremella, the largest genus, is heterogeneous. However, very few taxa have been examined carefully by either approach. Among the undescribed taxa are many growing on lichens (Diederich 1986, 1996, and personal communication). In this treatment, yeast states of 17 common temperate and tropical species are described. For convenience, haploid yeast states of the various species are referred to by their teleomorph names. The same species are also mentioned in the keys to similar anamorphic yeast genera (e.g., Cryptococcus, Bullera, etc.). Detailed descriptions of the teleomorphs are available in taxonomic ^orks dealing with these fungi, e.g., Bandoni 1958, Bandoni and Oberwinkler 1983, Bourdot and Galzin 1928, Kobayasi 1937, 1939, Martin 1952, Pilat 1957, Torkelsen 1968, Raitvir 1967, Lowy 1971, 1980, Wojewoda 1981, and in references cited in these works.

4. Key to species with yeast phases 1. 2(1). 3(2). 4(3). 5(4). 6(5). 7(6). 8(7).

a b a b a b a b a b a b a b a b

9(5).

a b 10(9). a b 11(4). a b 12(3). a b 13(12). a b 14(1). a b 15(14). a b 16(15). a b 17(14). a b 18(17). a b 19(17). a b

m>'o-Inositol assimilated -^ 2 m>;o-Inositol not assimilated -^ 14 Inulin assimilated Bulleromyces albus: Inulin not assimilated —> 3 Sucrose assimilated -^ 4 Sucrose not assimilated —» 12 Ethanol assimilated -^ 5 Ethanol not assimilated ^ 1 1 D-Glucosamine assimilated (may be delayed) -^ 6 D-Glucosamine not assimilated —^ 9 Nitrite assimilated, erythritol delayed Fibulobasidium inconspicuum: Nitrite and erythritol not assimilated —> 7 (Tremella aurantia, T. encephala, T. indecorata) Growth at WC -^ 8 Growth absent at 30°C Tremella aurantia: 30*'C negative strains of T. indecorata: Growth at 3>TC Tremella encephala: Growth absent at 37*'C Tremella indecorata: 37°C negative strains of T encephala: Raffinose assimilated -^ 10 Raffinose not assimilated Filobasidium inconspicuum: Lactose assimilated Sirobasidium intermedium: Lactose not assimilated Holtermannia corniformis: Melibiose and soluble starch assimilated Trimorphomyces papilionaceus: Melibiose and soluble starch not assimilated Tremella moriformis: Lactose assimilation delayed Sirobasidium magnum: Lactose not assimilated -^ 13 Soluble starch assimilated Holtermannia corniformis: Soluble starch not assimilated Tremella foliacea: 2-Keto-D-gluconate assimilated -^ 15 2-Keto-D-gluconate not assimilated —> 17 Raffinose assimilated -^ 16 Raffinose not assimilated Tremella globispora: L-Rhamnose assimilated Trimorphomyces papilionaceus: L-Rhamnose not assimilated Tremella fuciformis: Melezitose assimilated -^ 18 Melezitose not assimilated -^ 19 Galactose assimilated Tremella cinnabarina: 2-keto-D-gluconate negative strains oi T fuciformis: Galactose not assimilated Tremella coalescens: Galactose assimilated, maltose delayed Tremella brasiliensis: Galactose and maltose not assimilated Tremella mesenterica:

p. 641

p. 710 p. 712 p. 716 p. 714 p. 716 p. 714 p. 710 p. 710 p. 711 p. 717 p. 717 p. 711 p. 711 p. 714

p. 715 p. 717 p. 715 p. 713 p. 715 p. 713 p. 712 p. 716

VIb. Descriptions of teleomorphic basidiomycetous genera and species

710

5. Taxa described 5.1. Sirobasidiaceae \. Fibulobasidium inconspicuum Bandoni (1979) 2. Sirobasidium intermedium Kundalkar & Patil (1986) 3. Sirobasidium magnum Boedijn (1934)

Additional assimilation tests and other igroi characteristics: 2-Keto-D-gluconate 50% Glucose Starch formation Urease

+

-

+ +

Diazonium blue B Growth at 25"C Growth at 30"C Growth at 1>TC

+ + V

-

iS 1 iriie

5.2. Tremellaceae 4. Bulleromyces albus Boekhout & Fonseca (1991) 5. Holtermannia corniformis Kobayasi (1937) 6. Tremella aurantia SchweinitziFries (1822) 7. Tremella brasiliensis (MoUer) Lloyd (1922) 8. Tremella cinnabarina (Montagne) Patouillard (1900) 9. Tremella coalescens Olive (1951) 10. Tremella encephala Persoon (1822) 11. Tremella foliacea (Persoon:S.F. Gray) Persoon (1822) 12. Tremella fuciformis Berkeley (1856) 13. Tremella globispora Reid (1970) 14. Tremella indecorata Sommerfelt (1826) 15. Tremella mesenterica Retzius'.Fries (1822) 16. Tremella moriformis Smith:Berkeley (1856) 17. Trimorphomyces papilionaceus Bandoni & Oberwinkler (1983) 6. Systematic discussion of the species 90.1. Fibulobasidium inconspicuum Bandoni (1979) Growth on malt agar: After 3 days at 25°C, the cells are subglobose to globose, (2.5-5.5)x(2-5.5)|im, and single or in pairs. After one month at 20°C, the streak culture is gray-brownish-yellow, pasty, partly wrinkled and partly smooth with a lobate edge. Dalmau plate culture on potato agar: Pseudohyphae and hyphae are absent. Formation of ballistospores: Ballistospores are ftasiform to ellipsoidal, and measure (2-8)x( 1.5-3.5) [im. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

s + + + + s

-

s +

-

V

+ + + s s s

A/^-Acetyl-D-glucosami Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ Co-Q: Not determined. Mol% G + C: Not determined.

Origin of the strains studied: CBS 6963, CBS 7672, CBS 7679, CBS 7680, CBS 8237, CBS 8238, all from oak (Quercus virginiana), USA. 90.2. Sirobasidium intermedium Kundalkar & Patil (1986) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal to subglobose, (4.07.5) X (2.3-7.0) |jim, and single. Budding is polar or occasionally multilateral, sessile or on short denticles, and with sympodial proliferation. Colonies are yellowish to yellowish-cream, mucoid, smooth, shiny, pale and with the margin entire. Growth on the surface of assimilation media (glucose): Some flocks, a fragile ring and a sediment are formed. Dalmau plate culture on morphology agar: After 5 days at 25°C, primitive pseudohyphae may be present. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v 1 + + + + + + + + + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + 1 s + s + + s s + s + + + n +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation + Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 25°C Growth at 30°C Growth at SVC

Origin of the strain studied: CBS 7805, from Eutypella leprosa on elm (Ulmus sp.), Devon, UK, also reported from India (Kundalkar and Patil 1986).

90. Tremelloid genera with yeast phases / R.J. Bandoni and T. Boekhout

711

90.3. Sirobasidium magnum Boedijn (1934)

90.5. Holtermannia corniformis Kobayasi (1937) Growth on malt agar: After 3 days at 25°C, the Growth on malt agar: After 3 days at 25°C, the cells cells are globose to subglobose, (2-4.5) x (2.5-6) [im, and are short ellipsoidal to elongate, (5-15)x(2.5-5)|im, and single or in pairs. After one month at 20°C, the colonies short hyphal elements may occur. Budding is polar, and are yellowish or yellowish-white, smooth or with a finely sometimes on a broad base. After one month at 20°C, the reticulate border, shiny or dull in the middle of the streak, colonies are yellowish-white, smooth, shiny and mucoid. Dalmau plate culture on potato agar: Pseudohyphae and with a smooth or undulating edge. and extensive hyphae are absent, but occasionally a few Dalmau plate culture on potato agar: Pseudohyphae hyphal cells, sometimes with septa, are present. and hyphae are absent. Fermentation: absent. Formation of ballistospores: Ballistospores on corn Assimilation (25"C): meal agar are spherical, ovoidal or apiculate, and measure Glucose //-Acetyl-D-glucosamine Methanol (4-9) X (3.5-5) [Jim. Galactose Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 + v + + s 1 + + + s s -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + s s + 1 + + 1 + + 1 1 + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation + Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 25''C Growth at 30°C Growth at 2)TC

Origin of the strains studied: CBS 6803, CBS 6804, CBS 6805, CBS 6964, on decaying wood and oak {Quercus sp.), USA, Japan and Philippines. 90.4. Bulleromyces albus Boekhout & A. Fonseca (1991) See Bulleromyces albus: p. 641

L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

v + + 1 s v + -

Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

1 s s + n v

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation + Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 2 5 ^ Growth at SOT Growth at ?>TC

Origin of the strains studied: CBS 6979, CBS 7088, CBS 7675, CBS 7676, from dead wood, Japan.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

712

90.6. Tremella aurantia Schweinitz:Fries (1822) Growth on malt agar: After 3 days at 25°C, the cells are ellipsoidal, (3-5.5)x(2.5-4.5) jim, and single or in pairs. Budding occurs on a rather broad base. After one month at 20°C, the colonies are yellowish-brown, smooth, shiny, and slimy. Slide culture on potato agar: Pseudohyphae and hyphae are absent. Fermentation: absent. Assimilation (25"C):

90.7. Tremella brasiliensis (MoUer) Lloyd (1922) Growth on malt agar: After 3 days at 25°C, the cells are ellipsoidal, (2.5-5.5)x(1.5-4.0)|im, and single or in pairs. After one month at 20°C, the colonies are whitishbrown, smooth, shiny, somewhat slimy, and with a smooth edge. Slide culture on potato agar: Pseudohyphae and hyphae are absent, but cells may adhere in short chains. Fermentation: absent.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Assimilation (25"C):

+ + v + + + + + + + + + + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + s + v + + s + + 1 + v + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose w/Starch formation + Urease + Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Diazonium blue B Growth at 25T Growth at 30T

+ +

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s + s + + s + v s 1 s

A/^-Acetyl-D-glucosamine n Methanol Ethanol Glycerol Erythritol 1 Ribitol + Galactitol D-Mannitol + D-Glucitol + a-Methyl-D-glucoside Salicin 1 D-Gluconate DL-Lactate Succinate + Citrate v Inositol Hexadecane n Nitrate Vitamin-free -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 50% Glucose Starch formation + Urease + Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Diazonium blue B Growth at 25T Growth at WC

+ +

Origin of the strains studied: CBS 6965, CBS 8203, CBS 8213, on angiosperm wood, widely distributed, Origin of the strains studied: CBS 6966, CBS 8209, CBS 8212, CBS 8231, from Costa Rica. Canada. Comments: The yeast stage of Tremella aurantia is very similar to that of T. encephala and T. indecorata. With the set of identification tests currently used, these species can hardly be differentiated. However, T. aurantia does not assimilate melibiose and lacks growth at 30°C, whereas the other species show a variable or a slow response.

90. Tremelloid genera with yeast phases / R.J. Bandoni and T. Boekhout

90.8. Tremella cinnabarina (Montagne) Patouillard (1900) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are subglobose to ellipsoidal, (5.08.0)x(3.0-8.0)|im, and single. Budding is polar or occasionally multipolar, usually on a short denticle, and with sympodial proliferation. Colonies are grayish-cream, shiny, smooth, somewhat mucoid and with the margin entire. Growth on the surface of assimilation media (glucose): A fragile ring and a sediment are formed. Dalmau plate culture on morphology agar: Pseudohyphae and hyphae are absent. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 50% Glucose Starch formation v Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 25T Growth at 30T Growth at 37"C

Origin of the strain studied: unknown.

CBS 8234, origin

713

90.9. Tremella coalescens Olive (1951) Growth on malt agar: After 3 days at 25*'C, the cells are ellipsoidal, (3-6)x(1.5-3.5) fxm, and single or in pairs. After one month at 20°C, the colonies are whitish-brown, smooth, shiny, somewhat slimy and with a smooth edge. Slide culture on potato agar: Pseudohyphae and true hyphae are absent. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n s + + s s n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 50% Glucose Starch formation + Urease + Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Diazonium blue B Growth at 25T Growth at 30T

Origin of the strain studied: CBS 6967, from an angiosperm in a swamp, USA.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

714

90.10. Tremella encephala Persoon (1822) Growth on malt agar: After 3 days at 25°C, the cells are globose, subglobose to short ellipsoidal, (2.5-9) x (1.87) |im, and single or in pairs. After one month at 20°C, the colonies are yellowish-brown, smooth, shiny, and slimy. Slide culture on potato agar: Pseudohyphae and true hyphae are absent. Fermentation: absent. Assimilation (25**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s + + + + s v v + s + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + 1 + s + + s + + v + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation + Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 2 5 ^ Growth at 30°C Growth at 2>TC

+ + s v

Origin of the strains studied: CBS 6968, CBS 8207, CBS 8217, CBS 8218, CBS 8220, from conifer wood (rarely on angiosperms, cosmopolitan in temperate conifer forests), Canada. Comments: The yeast stage of this species is difficult to differentiate from the yeast stages of T. aurantia and T. indecorata using the present set of characteristics (see also under T. aurantia and T. indecorata.

90.11. Tremella foliacea (Persoon:S.F. Gray) Persoon (1822) Growth on malt agar: After 3 days at 25°C, the cells are globose, subglobose to short ellipsoidal, (3-8.5) x (28) ^m, and single or in pairs. After one month at 20°C, the colonies are whitish-brown, smooth, shiny, somewhat slimy, and with an entire margin. Slide culture on potato agar: Pseudohyphae and hyphae are absent. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v v 1 1 + + + + v + v

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + v + v + + + v + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation + Urease + Nitrite 1 Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 25*'C Growth at 30T Growth at 37°C

Origin of the strains studied: CBS 6969, CBS 7215, CBS 8208, CBS 8210, CBS 8227, on wood of deciduous trees {Acer macrophyllum) and conifers (Pinus mugo), Canada and Germany.

715

90. Tremelloid genera with yeast phases / R.J. Bandoni and T. Boekhout

90.12. Tremella fuciformis Berkeley (1856) Growth on malt agar: After 3 days at 25*^0, the cells are globose, subglobose to ellipsoidal, (2.5-7)x(2-4.5)|im, and single or in pairs. After one month at 20°C, the colonies are yellowish-brown, smooth, shiny and slimy. Slide culture on potato agar: Pseudohyphae and hyphae are absent. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + 1 + + + 1 + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate v 50% Glucose Starch formation + Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 25«C Growth at SO^C Growth at 37"C

+ + v

Origin of the strains studied: CBS 6970, CBS 6971, CBS 8225, CBS 8226, from, e.g., the fruiting bodies of commercially grown strains, Taiwan and Japan; pantropical and extending onto warm temperate areas.

90.13. Tremella globispora^ Reid (1970) Growth on malt agar: After 3 days at 25°C, budding yeast cells and true hyphae are present. The yeast cells are globose to ellipsoidal, (4-8)x(3-5.5) |im, and single or in pairs. The hyphae have a diameter of ca. 2 ^m. After one month at 20°C, the colonies are yellowish-white to brown, smooth, shiny, and very slimy. Slide culture on potato agar: Pseudohyphae and true hyphae are absent. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + s + + + + s s s +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + s + + + + + + s s + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate s 50% Glucose Starch formation v Urease + Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Diazonium blue B Growth at 25''C Growth at 3 0 ^

+ +

Origin of the strain studied: CBS 6972, from Diaporthe on Cornus nuttalli, Canada. Comments: In the original description, this name was incorrectly spelled as T. glohospora.

The original spelling of the species name as globospora has been treated as an orthographic error.

VIb. Descriptions of teleomorphic basidiomycetous genera and species

716

90.14. Tremella indecorata Sommerfelt (1826) Growth on malt agar: After 2 days at 25''C, the cells are globose, subglobose to elliopsoidal, (2.5-8) x (24.5) [im, and single or in pairs. After one month at 20*'C, the colonies are yellowish-brown, smooth, shiny, and very slimy. Slide culture on potato agar: Pseudohyphae and true hyphae are absent. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + v v v + v + + + + + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n 1 v + 1 + + + + + + + + -In -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation + Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at IS'^C Growth at SO^'C Growth at 3 7 T

90.15. Tremella mesenterica Retzius:Fries (1822) Growth on malt agar: After 3 days at 25°C, the cells are globose to subglobose or short ellipsoidal, sometimes cylindrical, (2.5-6) x (2-5) [xm, occasionally up to 16|im long, single, and in pairs or in short chains. After one month at 20°C, the colonies are yellowish-white to brown, smooth, shiny, and somewhat slimy. Slide culture on potato agar: Pseudohyphae and true hyphae are absent. Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 1 + s + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n 1 1 + + + 1 1 1 1 n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 50% Glucose Starch formation + Urease + Nitrite Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 2 5 T Growth at 3 0 T Growth at 3TC

Origin of the strains studied: CBS 6976, CBS 8232, from willow {Salix sp.), Canada. Origin of the strains studied: CBS 6973, CBS 6974, Comments: The yeast stage of this species is difficult CBS 6975, CBS 8211, CBS 8214, from dead wood of to differentiate from the yeast phases of T. aurantia and angiosperms, e.g., alder (Alnus sp.), Canada, Costa Rica. T. encephala. However, it may be differentiated from the former by variable growth responses with melibiose and at 30°C, and from the latter by lack of growth at 37°C.

90. Tremelloid genera with yeast phases / R.J. Bandoni and T. Boekhout

111

90.16. Tremella moriformis Smith:Berkeley (Berkeley 1860) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal, (4.5-9.0)x(3.0-6.0) fxm, and single; larger cells, (9.0-16.0)x(4.0-6.5)|im, occur as well, and may form short branched or unbranched chains. Budding is polar, on short denticles and sometimes with sympodial proliferation. Colonies are whitish, shiny, smooth, mucoid and with the margin entire. Growth on assimilation media (glucose): A thin film and ring, and a sediment are formed. Dalmau plate culture on morphology agar: After 5 days at 25°C, filaments are present, which may form primitive pseudohyphae. Fermentation: absent. Assimilation (25"C):

90.17. Trimorphomyces papilionaceus Bandoni & Oberwinkler (1983) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are subglobose, ellipsoidal, somewhat triangular, oblong or subcylindric, (4.5-7)x(3-6)(im, and single. Budding is polar, but sometimes multipolar, usually on a short denticle, and the cells may adhere in short chains. Cells up to 10.0 |im long occur, which bud on a broad base, leaving distinct scars. Colonies are pale pinkish-yellow to pale pinkish-brown, smooth, shiny, butyrous, and with the margin entire. Colonies of the dikaryotic yeasts are superficially similar, but the cells are H-shaped to irregularly butterfly-shaped; budding is usually polar, twin buds developing synchronously on closely situated points; conjugation occurs between these paired cells early in their development, and they are released as H-shaped cells.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: Pseudohyphae and hyphae are absent. Fermentation: absent.

+ + + + s + 1 s +

-

+ + s s s +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n s s s + + + 1 + + + + w n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation + Urease + Nitrite 1 Co-Q: Not determined. Mol% G + C: Not determined.

Diazonium blue B Growth at 25T Growth at 30''C Growth at 3>TC

+ + s

Origin of the strain studied: CBS 7810, on a dead branch of an alder (Alnus rubra), Canada.

Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s + + + + + + + + + + v + + + s

A'^-Acetyl-D-glucosamine n Methanol Ethanol Glycerol v Erythritol v Ribitol + Galactitol v D-Mannitol + D-Glucitol + a-Methyl-D-glucoside + Siilicin s D-Gluconate + DL-Lactate 1 Succinate + Citrate + Inositol V Hexadecane n Nitrate Vitamin-free -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation v Urease + Co-Q: Not determined. Mol% G + C: Not determined.

Nitrite Diazonium blue B Growth at 25''C Growth at BO^C

+ +

Origin of the strains studied: CBS 443.92, CBS 445.92, CBS 200.94, on the stem of Arundinaria-\\kQ cane, on culms of Sasa sp. and on the stem of bamboo, Japan and Canada.

718

VIb. Descriptions of teleomorphic basidiomycetous genera and species

91. Xanthophyllomyces Golubev W.I. Golubev Diagnosis of the genus Cells are encapsulated and reproduce by enteroblastic budding. True mycelium is absent; chlamydospores may be present. Slender cylindrical holobasidia arise mainly after conjugation between a cell and its bud. Basidiospores are produced terminally on minute pegs. They are not forcibly discharged and germinate by budding. Carotenoid pigments are synthesized, which give cultures an orange to salmon-red color. Xylose and rhamnose are present in extracellular polysaccharides. The urease and diazonium blue B tests are positive. Glucuronate assimilation is variable. ^Fermentation is present. myo-h\o^\to\ and nitrate are not assimilated. Starch-like compounds are produced. Coenzyme Q-10 is formed. Type species Xanthophyllomyces dendrorhous Golubev Species accepted \. Xanthophyllomyces dendrorhous Golubev (1995) Systematic discussion of the species 91.1. Xanthophyllomyces dendrorhous Golubev (1995) Anamorph: Phaffia rhodozyma Miller, Yoneyama & Soneda^ Synonyms: IRhodomyces dendrorhous Ludwig (1891) Rhodozyma montanae Phaff, Miller, Yoneyama & Soneda (1972) nom. nud. Phaffia rhodozyma Miller, Yoneyama & Soneda (1976b) Cryptococcus rhodozyma (Miller, Yoneyama & Soneda) Weijman, Rodrigues de Miranda & van der Walt (1988)

Growth in glucose-yeast extract-peptone water: After 3 days at 18°C, the cells are spheroidal to ovoidal (width/length ratios are 1.0 to 2.5, av 1.4), 3.5-10.0x5.013.5 fxm, (av. 6.0x8.5 ^im) with small capsules, and single, in pairs, or occasionally in short chains. A very thin creeping pellicle may be present. After 1 month, there is a sediment, a ring, and sometimes islets. Growth on Difco yeast morphology agar: After 1 month at 18°C, the streak culture is orange to salmonred, nearly smooth, glossy to semi-dull, soft; the margin is entire or undulating. Spheroidal chlamydospores with refractile granules may be formed. Slide cultures on corn meal agar: After 10 days at 18''C, a rudimentary pseudomycelium may occur. No true mycelium is formed. Ballistospores are not observed. Life cycle: Formation of basidiospores is observed on agar media containing polyols (ribitol, D-glucitol, L-arabitol or D-xylitol), pentoses (D-ribose, D-xylose or D-arabinose) or D-lyxose, except for D-mannitol and L-arabinose, after 2-3 weeks at 18°C. Following conjugation between a cell and its bud, a slender cylindrical holobasidium forms which is 2 to 3.5 jim in diameter.

Fig. 366. X. dendrorhous. After 2 weeks at 20°C on Difco yeast nitrogen base agar with 0.5% glucitol. (A) Basidium with basidiospores formed following conjugation between a cell and its bud. (B) Basidium with terminal pegs that are attachment sites for basidiospores. (C) Attached basidiospores germinating by budding. Bars= 10 ^im.

and 30-165 [im (usually, 70-80 |jim) in length (Fig. 366A). Rarely does conjugation occur between independent cells nor does a basidium form without apparent conjugation. Usually 2>-A (up to 6) thin-walled oval or ellipsoidal spores, 3.4-6.0x5.0-12.0|im (av. 4x8 jum), are produced

^ The information in this paragraph was added by the Editors to allow comparison with other genera. ^ Golubev (1995) proposed, on the basis of descriptions by Ludwig (1891, 1896), that Rhodomyces dendrorhous represents the anamorph of X. dendrorhous. With the exception of drawings in the original publications, type material of R. dendrorhous is not available for comparison. Because the name Phaffia rhodozyma is of current economic importance, a proposal is being made to conserve this name against R. dendrorhous as the anamorphic name of X. dendrorhous. In view of this development, the editors have listed P. rhodozyma as the anamorph oi X. dendrorhous.

91. Xanthophyllomyces Golubev / W.I. Golubev

terminally on the apex of the basidium giving it a flowerlike appearance in apical view. Basidiospores are not forcibly discharged. They are formed on minute pegs (Fig. 366B) but appear sessile and germinate by budding (Fig. 366C).

Fermentation: Glucose Galactose Sucrose Maltose Lactose

s

-

w w

-

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

w/+ + + +

-

+ +

-

+ s + w/w/-

-

Raffinose Trehalose Cellobiose Melezitose Soluble starch

w w w s w/-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s s

-

w/-

-

+ w/w/s s s s s

-

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + Thiamine-free + 5-Keto-D-gluconate w Pyridoxine-free + D-Glucuronate V Xylan w Pectin Xylitol + L-Arabinitol w Erythrose Arbutin + + (3-Methyl-D-glucoside Cadaverine w [3-Methyl-D-arabinoside Creatine Aesculin + Creatinine Ascorbate L-Lysine w Mucate Ethylamine Fumarate s w 50% Glucose Oxalate yeast extract agar Propionate 10% NaCl/5% glucose Acetate s Starch formation (pH in- + Allantoin + dependent) Uric acid s Urease + Formamide s Nitrite Acetamide Gelatin liquefaction w Thioacetamide Glucono-6-lactone s Growth at 25°C w/L-Tartaric acid Growth at 30°C _ L-Malic acid ws Biotin-free Co-Q: 10 (Sugiyama et al. 1985). MoI% G + C:48.3 (BD: Miller et al. 1976b). Extracellular polysaccharide hydrolyzates: Mannose, xylose, glucose, galactose and rhamnose. Synthesis of carotenoid pigment s: Positive, approximately 85% is astaxanthin (Andrewes et al. 1976).

Origin of the strains studied: Slime fluxes of deciduous trees: alder {Alnus japonica) (1), birch {Betula

719

maximowicziand) (1), B. tauschii (1), dogwood {Cornus brachypoda) (2), beech (Fagus crenata) (1), all from Japan; B. verrucosa from Russia (10); B. papyifera (1) from Alaska; Betula sp. (1) from Finland. Type strain: VKM Y-2786 (CBS 7918, JCM 9681), isolated from Betula verrucosa flux, Russia. Comments on the genus Xanthophyllomyces dendrorhous is an inhabitant of spring sapwood flows of deciduous trees and due to the abundant development of the yeast, the flowing sap assumes a salmon-red color (Golubev et al. 1977b). Ludwig (1891, 1896) reported a similar phenomenon caused by a yeast that he described as Rhodomyces dendrorhous, and which Golubev (1995) considered to be the anamorph of X. dendrorhous. Placement of X. dendrorhous among the basidiomycetous yeasts has been determined from comparisons using the strains designated as Phaffia rhodozyma, hence, the ensuing discussion will use this latter name. From the primary and secondary structure of 5S rRNA (Gottschalk and Blanz 1985), presence of xylose in the capsular polysaccharide (Sugiyama et al. 1985, Weijman and Rodrigues de Miranda 1988), sensitivity to mycocins produced by Cystofilobasidium bisporidii and Cryptococcus laurentii (Golubev and Kuznetsova 1989, Golubev 1990b), ability to synthesize starchlike compounds (pH independent) and assimilation of D-glucuronate, a tremellaceous (filobasidiaceous) affinity is suggested for R rhodozyma. Based on these observations, the name Phaffia was regarded by Weijman et al. (1988) as a synonym of Cryptococcus. However, comparisons of partial 18S and 26S rRNA sequences showed that Phaffia does not cluster with Cryptococcus, but that it is close to Cystoffiobasidium (Gueho et al. 1989, Nakase et al. 1993, Yamada and Kawasaki 1989b, Yamada et al. 1990a) and Mrakia (Fell et al. 1995). Golubev (1995) established that polyols and pentoses induce conjugation between a cell and its bud (pedogamy) in X. dendrorhous, and the subsequent formation, without production of mycelium, of a slender holobasidium that forms oval basidiospores at the apex. Cultivation on polyol-containing media appears to simulate the natural habitat when spring sapwood flow ceases and the flux appears dry. In response to water stress, eukaryotic microorganisms, which are inhabitants of the spring sap flows, accumulate high concentrations of polyhydric alcohols (Brown 1978), and this change in physiology appears to trigger sexual reproduction in X. dendrorhous. The strains of this species that were studied are rather homogenous in their cultural, morphological, and physiological properties, and their isoenzyme and rDNA profiles (Varga et al. 1995). There are only minor differences in color intensity, cell sizes, starch fermentation and in the assimilation of those carbon compounds that are weakly utilized. However, significant differences in RAPD patterns and electrophoretic karyotypes were found among strains (Nagy et al. 1994, Adrio et al. 1995).

This Page Intentionally Left Blank

Part Vic

Descriptions of anamorphic basidiomycetous genera and species Contents Bensingtonia B. ciliata B. ingoldii B. intermedia B. miscanthi B. naganoensis B. phyllada B. subrosea B. yamatoana B. yuccicola Bullera B. alba B. armeniaca B. crocea B. dendrophila B. globispora B. megalospora B. miyagiana B. oryzae B. pyricola B. pseudoalba B. punicea B. sinensis B. variabilis Cryptococcus C. aerius C. albidosimilis C albidus C. amylolentus C. antarcticus C. aquaticus C. ater C. bhutanensis C. consortionis C. curvatus C. dimennae C. feraegula C C friedmannii C. fuscescens C. gastricus C. gilvescens C. heveanensis C. huempii C. humicolus C. hungaricus C. kuetzingii C laurentii C. luteolus C. macerans C magnus C. marinus C. neoformans

flavus

723 724 724 725 726 726 727 728 729 729 731 732 732 733 733 734 735 736 736 737 738 739 739 740 742 747 747 748 749 749 750 750 751 751 752 753 753 754 754 754 755 756 756 757 757 758 759 759 760 760 761 762 762

C. podzolicus C. skinneri C. terreus C. uniguttulatus C. uishniacii C. yarrowii Fellomyces F. fuzhouensis E horovitziae F. penicillatus F. polyborus Hyalodendron H. lignicola Itersonilia /. perplexans Kockouaella K. imperatae K. thailandica Kurtzmanomyces K. nectairei K. tardus Malassezia M furfur M. pachydermatis M. sympodialis Moniliella M acetoabutens M. mellis M. pollinis M. suaveolens Phaffia Pseudozyma P. antarctica P aphidis P. fiocculosa P. fusiformata P prolifica P. rugulosa P. tsukubaensis Ustilago maydis Reniforma R. strues Rhodotorula R. acheniorum R. acuta R. araucariae R. armeniaca R. aurantiaca R. auriculariae R. bacarum R. bogoriensis R. buffonii R. diffluens

762 763 764 765 765 765 768 769 769 770 771 773 773 775 775 777 777 778 780 780 781 782 782 782 783 785 785 786 787 787 789 790 791 792 792 793 794 794 795 796 798 798 800 805 805 806 806 807 807 808 808 809 810

Kferulica R. foliorum R. fragaria R. fujisanensis R. futronensis R. glutinis R. graminis R. hinnulea R. hordea R. hylophila R. ingeniosa R. javanica R. lactosa R. lignophila R. marina R. minuta R. mucilaginosa R. muscorum R. nothofagi R. philyla R. phylloplana R. pilati R. pustula R. sonckii Sporobolomyces S. alborubescens S. elongatus S.falcatus S.foliicola S. gracilis S. griseofiauus S. inositophilus S. kluyueri-nielii S. lactophilus S. oryzicola S. phyllomatis S. roseus S. ruber S. salicinus S. salmonicolor S. sasicola S. shibatanus S. singularis S. subbrunneus S. tsugae S. xanthus Sterigmatomyces S. eluiae S. halophilus Sympodiomycopsis S. paphiopedili Tilletiopsis T. albescens

810 811 811 812 813 814 815 816 816 817 817 818 818 818 819 820 820 822 823 823 824 824 825 826 828 830 830 831 831 832 832 833 834 834 835 835 836 837 838 839 839 839 839 840 841 841 844 844 845 846 846 848 848

722

T.flava T. fuluescens T. minor T. pallescens T. washingtonensis Trichosporon T. aquatile T. asahii T. asteroides T. brassicae T. coremiiforme

Vic. Descriptions ofanamorphic

849 850 851 851 852 854 856 857 858 859 859

T. cutaneum T. dulcitum T.faecale T. gracile T. inkin T. jirovecii T. laibachii T. loubieri T. moniliiforme T. monteuideense T. mucoides

basidiomycetous genera and species

T. ouoides 860 T. pullulans 861 T. sporotrichoides 862 862 Trichosporonoides T. madida 863 T. megachiliensis 864 T. nigrescens 865 T. oedocephalis 866 T. spathulata 866 867 Tsuchiyaea T. wingfieldii 868

869 869 870 873 873 874 875 875 876 878 878

723

92. Bensingtonia Ingold emend. Nakase & Boekhout / T. Boekhout and T. Nakase

92. Bensingtonia Ingold emend. Nakase & Boekhout T. Boekhout and T. Nakase Diagnosis of the genus Cells are ellipsoidal, ovoidal or elongate. Budding is mostly polar, with buds sessile or on short denticles, enteroblastic, and with percurrent or sympodial proliferation. Ballistoconidia are bilaterally symmetrical, straight or curved, apiculate, ellipsoidal, ovoidal, amygdaliform, falcate, allantoid or reniform. Colonies are whitish, cream, pale pink, brownishyellow (ochre), brownish or grayish-red. True mycelia and/or pseudomycelia may be present. Septal pores are simple. Clamp connections are absent. Fermentation is absent. D-Glucuronate and nitrate may be assimilated; myo-inositol is not assimilated. Diazonium blue B and urease reactions are positive. Xylose is absent from whole-cell hydrolyzates. The major ubiquinone is Q-9. Type species Bensingtonia ciliata Ingold Species accepted 1. Bensingtonia ciliata Ingold (1986) 2. Bensingtonia ingoldii Nakase & M. Itoh (1989) 3. Bensingtonia intermedia (Nakase & M. Suzuki) Nakase & Boekhout (1988) 4. Bensingtonia miscanthi (Nakase & M. Suzuki) Nakase & Boekhout (1988) 5. Bensingtonia naganoensis (Nakase & M. Suzuki) Nakase & Boekhout (1988) 6. Bensingtonia phyllada (van der Walt & Y. Yamada) van der Walt, Nakagawa & Y. Yamada ex Boekhout (1991) 7. Bensingtonia suhrosea (Nakase & M. Suzuki) Nakase & Boekhout (1988) 8. Bensingtonia yamatoana (Nakase, M. Suzuki & M. Itoh) Nakase & Boekhout (1988) 9. Bensingtonia yuccicola (Nakase & M. Suzuki) Nakase & Boekhout (1988) Table 72 Key characters of species in the genus Bensingtonia Species

Assimilation^ Sor

Bensingtonia ciliata

+

B. ingoldii

-

B. intermedia B. miscanthi

+ +

Sue Mai Cel _

_

+ v

_

+

_

+

+

+

+

_

+ +

+ +

+

_ -

B. naganoensis

-

+

+

+

-

B. phyllada

+

+

+

+

+

+

+

+

+

B. subrosea

+

+

+

B. yamatoana

_

+

-|__

B. yuccicola

+

_

_

_

v

+

Tre Lac Mel Raf Mlz

+

-

+

^

_

+

+ + _

_

+ -

_

-

_

_

+

+

-

-

+

+

-

|

_

_

v

+ -

_

_

+

-

_

_

_

_

_

v +

_

_

-

+

+

-

_

Sst L-Ar D-Ar Rib Rha Eth +

_

+

-

+

+

+

-

+

-

_

_

_

-

-

-

-

Ery a-M Sal 2Kg Nit

+

-

_

-

-

_

+

_

+

+

+

+

+

-

+

_

-

-

+

_

_

+

_

-

+

+

+

-

-

-

-

-

.

Y

_

_

_

_

4

.

_

_

_

+ -

|

-

_

_

_

_

_

_

_

_

_

-

i

-

_

-

i

-

^ Abbreviations: Sor, L-sorbose; Sue, sucrose; Mai, maltose; Cel, cellobiose; Tre, trehalose; Lac, lactose; Mel, melibose; Raf, raffinose; Mlz, melezitose; Sst, soluble starch; L-Ar, L-arabinose; D-Ar, D-arabinose; Rib, D-ribose; Rha, L-rhamnose; Eth, ethanol; Ery, erythritol; a-M, a-methyl-D-glucoside; Sal, salicin; 2Kg, 2-keto-D-gluconate; Nit, nitrate.

Key to species See Table 72. 1. 2(1). 3(2). 4(1).

a b a b a b a b

2-Keto-D-gluconate assimilated —> 2 2-Keto-D-gluconate not assimilated -^ 4 L-Sorbose assimilated L-Sorbose not assimilated -^ 3 L-Arabinose, cellobiose, melibiose, erythritol and nitrate assimilated L-Arabinose, cellobiose, melibiose, erj^hritol and nitrate not assimilated Nitrate assimilated -^ 5 Nitrate not assimilated

B. intermedia: p. 725 B. ingoldii: p. 724 B. yamatoana: p. 729 B. subrosea: p. 728

Vic. Descriptions ofanamorphic basidiomycetous genera and species

724

5(4). 6(5). 7(6). 8(7).

a b a b a b a b

Nitrite assimilated -^ 6 Nitrite not assimilated Melibiose assimilated, trehalose not assimilated Melibiose not assimilated, trehalose assimilated —> 7 Maltose and a-methyl-D-glucoside assimilated Maltose and a-methyl-D-glucoside not assimilated —> 8 Sucrose assimilated Sucrose not assimilated

Systematic discussion of the species 92.1. Bensingtonia ciliata Ingold (1986) Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ovoidal to ellipsoidal, (8.5-10.0)x(5.07.0) |im, and single. Budding is polar, with the buds sessile or on short denticles and with sympodial or percurrent proliferation (Fig. 367). Cells sometimes germinate with unbranched or irregularly branched hyphae, 2.0-3.5 fxm wide, in which septa and retraction septa occur. Colonies are butyrous, smooth, glabrous or somewhat pruinose, shiny or dull, whitish to pale pinkish-cream, with the margin entire. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, no mycelium or pseudomycelium is formed. Aerobic growth is whitish-cream, shiny, butyrous, smooth, with the center slightly raised, and the margin entire. Formation of ballistoconidia: Ballistoconidia are formed terminally at hyphae or hyphal branchlets on malt extract agar or on V8 juice agar. They are ovoidal or ellipsoidal to amygdaliform, (6.0-10.0) x (2.5-4.2) |im (Fig. 367). Fermentation: absent. Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

w

-

+

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+ + w + + n + Additional assimilation tests and other g;ro\ characteristics: 2-Keto-D-gluconate Nitrite 50% Glucose Growth at 25T + Starch formation Growth at 3 0 ^ -

Urease

+

B. ciliata: p. 724 B. naganoensis: p. 726 B. phyllada:

p. 727

B. miscanthi: B. yuccicola:

p. 726 p. 729

Co-Q: 9, CBS 7514 (Boekhout 1987). Mol% G + C: 45.0, CBS 7514 {T^: Boekhout 1991a).

Origin of the strains studied: CBS 7514 (IMI291091), Auricularia auricula-judae var. lacteae Quel., C.T. Ingold, Great Britain, and a morphological mutant derived from this strain (Ingold 1988). Type strain: IMI 291091.

Fig. 367. B. ciliata, CBS 7514. Yeast cells and ballistoconidia on malt extract agar. Bar = 5 ^im.

Comments: According to Ingold (1986) the ballistoconidia of this strain measure (12.0-15.0)x(5.0-6.0)|im on 0.2% malt extract agar. Based on our measurements ((6.0-10.0) X (2.5^.2) (Lim) on 5% malt extract agar and V8 juice agar, one has to consider a large variability in the size of the ballistoconidia, depending on the media used. Contrary to the report of Nakase and Boekhout (1988), we found B. ciliata nitrate positive. 92.2. Bensingtonia ingoldii Nakase & M. Itoh (Naliase et al. 1989a) Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ovoidal, ellipsoidal, fusoidal to subglobose, (6.0-10.0)x(3.5-6.0)(im, single or in short chains. Budding is polar, with the buds sessile or on short denticles and with sympodial proliferation (Fig. 368). Colonies are butyrous, smooth, dull, grayish-cream, with the margin entire. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate on morphology agar: After 7 days at IT'^C, no mycelium or pseudomycelium is formed. Aerobic growth is yellowish-cream, dull to somewhat shiny, butyrous, smooth with the center somewhat raised, and the margin entire.

lis

92. Bensingtonia Ingold emend. Nakase & Boekhout / T. Boekhout and T. Nakase Sporobolomyces weijmanii Nakase & M. Suzuki (1987c)

Fig. 368. B. ingoldii, CBS 7424. Yeast cells and ballistoconidia on malt extract agar. Bar = 5 ^Jim.

Formation of ballistoconidia: Ballistoconidia are formed on sterigmata of up to ca. 10|im long on malt extract, V8 juice, corn meal, and yeast-malt extract agars. They are reniform, and 6.0-9.0x2.0-4.2 |Lim (Fig. 368). Ballistoconidia sometimes form many sterigmata, giving the cells a star-like appearance. Fermentation: absent. Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + 1 + s + + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite 50% Glucose Growth at 25"C Starch formation Growth at 30''C Urease + Co-Q: 9, JCM 7445 (Nakase et al. 1989a). Mol% G + C: 55.7, JCM 7445 (HPLC: Nakase et al. 1989a).

+ + -

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ovoidal, fusoidal or cylindrical, straight or slightly curved, (9-30)x(2.5-7.0)|im, and frequently in branched short chains. Budding is polar, with the buds showing sessile and sympodial proliferation. Colonies are butyrous, smooth, dull, cream, with the margin entire. Growth on the surface of assimilation media (glucose): A ring, islets, and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, a pseudomycelium is formed (Fig. 369); cells may be septate. Aerobic growth is creamish-white, shiny, butyrous, flat, smooth or lightly reticulate, with the margin entire. Formation of ballistoconidia: Ballistoconidia are formed on morphology, malt extract, corn meal, and potato dextrose agars. They are amygdaliform, ellipsoidal to reniform, and curved, (6.0-11.0)x(2.0-5.0)|Jim (Fig. 369). Fermentation: absent. Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ V V

+ +

-

V

V

V

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+ +

-

+

-

+ +

-

n

V

Origin of the strain studied: CBS 7424 (JCM 7445), leaf of Knightia excelsa, J. Sugiyama, New Zealand. Type strain: JCM 7445. Comments: Bensingtonia ingoldii is physiologically similar to B. intermedia. B. ingoldii differs from the latter species by the presence of sympodially branched denticles or sterigmata, a somewhat lower mol% G + C content (Nakase et al. 1989a), and assimilation of L-arabinose, lactose, melibiose, me^o-erythritol, and nitrate. 92.3. Bensingtonia intermedia (Nakase & M. Suzuki) Nakase & Boekhout (1988) Synonyms: Bullera intermedia Nakase & M. Suzuki (1986b) Sporobolomyces intermedins (Nakase & M. Suzuki) Nakase & M. Suzuki (1987c)

Fig. 369. B. intermedia, CBS 7281. Pseudomycelium and ballistoconidia on morphology agar. Bar = 5 ^im.

726

Vic. Descriptions of anamorphic basidiomycetous genera and species

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite 50% Glucose Growth at 25T + Starch formation Growth at 30°C Urease + Co-Q: 9, JCM 5291, JCM 5651 (Nakase and Suzuki 1986b, 1987c) Mol% G + C: 57.8-60.0, JCM 5291, JCM 5651 {T^: Nakase and Suzuki 1986b, 1987c).

Origin of the strains studied: CBS 7226 (JCM 5291), dead leaf of rice (Oryza sativa), T. Nakase, Japan; CBS 7281 and 7241 (both JCM 5651), ex dead leaf Miscanthus sinensis, T. Nakase, Japan. Type strain: JCM 5291. Comments: Yamada and Nakagawa (1988) regarded B. intermedia and Sporobolomyces weijmanii conspecific based on the electrophoretic comparison of seven enzymes. However, several nutritional differences exist between the type strains ofB. intermedia and S. weijmanii, e.g., assimilation of D-xylose, sucrose, maltose, melezitose and ribitol. The cell wall is layered and electron dense (Boekhout et al. 1992b). 92.4. Bensingtonia miscanthi (Nakase & M. Suzuki) Nakase & Boekhout (1988) Synonym: Sporobolomyces miscanthi Nakase & M. Suzuki (1987c)

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ellipsoidal, ftisoidal to cylindrical, straight or somewhat curved, (7.0-14.0) x (2.0-4.0) jim, and single. Budding is polar or lateral, with the buds sessile or on short denticles and with sympodial proliferation. Colonies are butyrous, smooth, shiny, pale grayish-cream, with the margin entire or somewhat eroded. Growth on the surface of assimilation media (glucose): A ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, no pseudomycelium or mycelium is formed. Aerobic growth is pale pinkish-cream, dull, butyrous, with a slightly irregular surface, flat or slightly raised, and with the margin entire or somewhat crenulate.

Fig. 370. B. miscanthi, CBS 7282. Ballistoconidia on com meal agar. Bar = 5!im.

Assimilation (17"C:): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

1 +

-

+ + 1

-

1

-

1

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

-

+

-

+ +

-

w + +

-

n +

-

Additional assimilation tests and other g ro^ characteristics:

2-Keto-D-gluconate Nitrite + 50% Glucose Growth at 25T + Starch formation Growth at 30°C + Urease Co-Q: 9, JCM 5733, NB-151 (Nakase and Suzuki 1987c). Mol% G + C: 47.2^7.5, two strains, JCM 5733, NB-151 {T^: Nakase and Suzuki 1987c).

Origin of the strain studied: CBS 7282 (JCM 5733), dead leaves of Miscanthus sinensis, T. Nakase, Japan. Type strain: JCM 5733. Comments: Cell shape varies considerably depending on the substrate of growth. On potato dextrose agar and on morphology agar, Sterigmatomyces-XikQ sterigmata are formed. Ballistoconidia frequently germinate with short acropetal chains of budding cells.

Formation of ballistoconidia: Ballistoconidia are 92.5. Bensingtonia naganoensis (Nakase & abundantly formed on potato dextrose, corn meal, malt M. Suzuki) Nakase & Boekhout (1988) extract, and morphology agars. They are reniform, allan- Synonym: toidal, or ellipsoidal. On corn meal agar they measure Sporobolomyces naganoensis Nakase & M. Suzuki (1987a) (9.0-17.0) X (4.3-5.5) fxm, and on the lid of the petri dish Growth on 5% malt extract agar: After 5 days (5.0-8.5)X(4.0-5.2) jim (Fig. 370). at 17°C, the cells are fusoidal to ellipsoidal, (8.010.0) X (2.3^.3) |im, and single. Budding is polar, rarely Fermentation: absent. lateral, with the buds sessile or on short denticles and with

92. Bensingtonia Ingold emend. Nakase & Boekhout / T. Boekhout and T. Nakase

percurrent or sympodial proliferation. Colonies are rather dry, smooth, dull, pale grayish-cream, with the margin entire. Growth on the surface of assimilation media (glucose): A ring and a sediment are formed. Dalmau plate on morphology agar: No pseudomycelium or mycelium is formed. Aerobic growth is cream, dull, butyrous, nearly flat, with the surface weakly transversely ridged, and the margin entire. Formation of ballistoconidia: Ballistoconidia are abundantly formed on morphology, corn meal and malt extract agars. They are amygdaliform, ellipsoidal to allantoid, (6.0-10.0)x(3.0-4.2) |im (Fig. 371).

Fig. 371. B. naganoensis, CBS 7286. Ballistoconidia on malt extract agar. Bar = 5 (im.

Fermentation: absent. Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + 1 1 +

111

Comments: Bensingtonia naganoensis can be differentiated from both B. miscanthi and B. subrosea, by its inability to assimilate trehalose, lactose and its ability to grow on melibiose and melezitose. On malt extract agar, long lysed sterigmata are sometimes present. 92.6. Bensingtonia phyllada (van der Walt & Y. Yamada) van der Walt, Nakagawa & Y. Yamada ex Boekhout (1991a) Synonyms: Sporobolomyces phylladus (as S. phyllades) van der Walt & Y. Yamada (van der Walt et al. 1989a) Bensingtonia phylladus (van der Walt & Y Yamada) Y Yamada, Nakagawa & van der Walt (1988c) nom. inval.

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ellipsoidal, broadly ellipsoidal, ovoidal or subglobose, (8.0-13.0)x(5.0-8.0) |im, and single. Budding is polar or lateral, with the buds sessile or on short denticles. Cells may develop 1.5-3.5 ^m wide branched hyphae, in which retraction septa occur, and with the cytoplasm retracted in certain cells. Colonies are butyrous, smooth, dull or somewhat shiny, whitishcream, and with the margin somewhat eroded because of submerged marginal hyphal growth. Growth on the surface of assimilation media (glucose): A ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, short hyphae with retraction septa may develop. Aerobic growth is whitish to pinkish-cream, somewhat shiny or dull, butyrous, nearly flat, smooth or somewhat transversely reticulate, with the margin entire or somewhat crenulate. Formation of ballistoconidia: Ballistoconidia are formed on morphology, malt extract and corn meal agars. They are ellipsoidal, amygdaliform, allantoid to falcate, (9.0-14.0) x (4.0-7.0) [im (on the surface of malt extract agar ballistoconidia measure (14.0-21.0)x(5.0-37.0) |im) (Fig. 372). Fermentation: absent.

n + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Nitrite + 50% Glucose Growth at 25X + Starch formation Growth at SO^'C Urease + Co-Q: 9, JCM 5978 (Nakase and Suzuki 1987a). Mol% G + C: 55.8, JCM 5978 {T^\ Nakase and Suzuki 1987a).

Origin of the strain studied: CBS 7286 (JCM 5978), dead leaf of Sasa sp., T. Nakase, Japan. Type strain: JCM 5978.

Fig. 372. B. phyllada, CBS 7169. Ballistoconidia on malt extract agar. Bar = 5|jim.

Vic. Descriptions of anamorphic basidiomycetous genera and species

728

Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + w + + w w -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + n + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 50% Glucose Starch formation Urease Co-Q: 9, CBS 7169 (van Mol% G + C: 50.4, CBS

Nitrite + Growth at 25°C + Growth at 3 0 ^ + der Walt et al. 1989a). 7169 (7;^: van der Walt et al. 1989a).

Origin of the strain studies: CBS 7169, leaves of Sclerocarya caffra, J.P. van der Walt, South Africa. Type strain: CBS 7169. Comments: The ultrastructure of the cell walls is electron dense and layered, and septa are simple diaphragmalike and attenuating towards the pore (Boekhout et al. 1992b). The observed pore structure suggests a close phylogenetic relationship with the genera Sporobolomyces and Sporidiobolus. Budding of yeast cells occurs percurrently (Boekhout, unpublished results). 92.7. Bensingtonia subrosea (Nakase & M. Suzuki) Nakase & Boekhout (1988) Synonym: Sporobolomyces subroseus Nakase and M. Suzuki (1987c)

Fig. 373. B. subrosea, CBS 7283. Ballistoconidia on corn meal agar. Bar = 5fxm.

Formation of ballistoconidia: Ballistoconidia were observed on corn meal agar. They are ellipsoidal, and sometimes somewhat pointed toward the apex, (7.013.0)x(3.8-5.0)[xm(Fig. 373). Fermentation: absent. Assimilation (17'*C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ 1 + + + + + + + 1 -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n 1 + + + + 1 + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Nitrite 50% Glucose Growth at 25*'C + Starch formation Growth at 30°C Urease + Co-Q: 9, JCM 5735 (Nakase and Suzuki 1987c). Mol% G + C: 46.5, JCM 5735 {T^: Nakase and Suzuki 1987c).

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ellipsoidal to cylindrical, (7.014.0) X (4.0-7.0)|im, and single. Budding is mostly polar, and occasionally lateral, with the buds sessile or on short denticles and with percurrent proliferation. Colonies are Origin of the strain studied: CBS 7283 (JCM 5735), butyrous, smooth, shiny, grayish-cream, with the margin dead leaf of Miscanthus sinensis, T. Nakase, Japan. Type strain: JCM 5735. entire. Growth on the surface of assimilation media (glucose): Absent, but a sediment may be formed. Dalmau plate culture on morphology agar: After 7 days at \TC, no pseudomycelium or mycelium is formed. Aerobic growth is pale pinkish-cream, shiny, butyrous, smooth, flat or slightly raised, and with the margin entire.

Comments: Bensingtonia subrosea is similar to B. miscanthi in morphology, nutritional physiology and mol% G + C. Due to a low similarity value of about 19% in the electrophoretic patterns of 10 enzymes in both species, Nakase and Suzuki (1987c) described them as separate species. Physiologically, B. subrosea can be differentiated from B. miscanthi by assimilation of maltose, soluble Starch and the inability to assimilate nitrate and nitrite.

92. Bensingtonia Ingold emend. Nakase & Boekhout / T. Boekhout and T. Nakase

729

92.8. Bensingtonia yamatoana (Nakase, M. Suzuki & M. Itoh) Nakase & Boekhout (1988)

Synonym: Sporobolomyces yamatoanus Nakase, M. Suzuki & M. Itoh (1987b)

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are cylindrical, ellipsoidal or subglobose, straight or somewhat curved, (9.0-15.0)x(2.0-4.0) ^im. Septate hyphae are present, in which retraction septa are formed. Conidiogenesis is polar, with the buds sessile or on terminal sterigma-like outgrowths and with percurrent proliferation. Blastoconidia are formed on hyphae. Colonies are rather tough or butyrous, dry, flat or with the center raised, smooth or somewhat irregular, dull, pale yellowish-brown, and the margin may be entire or eroded. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, a septate mycelium is formed. Cylindrical, oblong or ellipsoidal blastoconidia are formed laterally and terminally on hyphae or sterigma-like outgrowths. Aerobic growth is variable, yellowish-cream, yellowish, or yellowish-brown, dull, tough, dry, or butyrous, with the surface nearly smooth, or irregular, low pustulate, transversely wrinkled to reticulate, with the margin crenulate, entire or eroded. Formation of ballistoconidia: Ballistoconidia are formed laterally or terminally on hyphae on corn meal agar. They are reniform, falcate or allantoid, (9.020.0)X(3.0-6.0) |im (Fig. 374). Fermentation: absent. Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + v 1 -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Nitrite Growth at 25°C Growth at 30''C

Origin of the strains studied: CBS 7242 (JCM 5977), dead leaf of ^'a^a sp., T. Nakase, Japan; CBS 7243 (JCM 2896), CBS 7244 (JCM 5652), both from dead leaf of Miscanthus sinensis, T. Nakase, Japan; CBS 7245 (JCM 5975), dead leaf of iSa^a sp., T. Nakase, Japan. Type strain: JCM 2896 (CBS 7243). Comments: Bensingtonia yamatoana can be readily distinguished from all other Bensingtonia species because of the following characteristics: assimilation of 2-keto-Dgluconate, abundant formation of hyphae and rather dark yellow (ochre) colonies, and large ballistoconidia. Under TEM, septa of CBS 7243 have a central narrow pore. The cell walls are electron dense and layered (Boekhout et al. 1992b). 92.9. Bensingtonia yuccicola (Nakase & M. Suzuki) Nakase & Boekhout (1988) Synonym: Sporobolomyces yuccicola Nakase & M. Suzuki (1988)

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ellipsoidal, (7.0-11.0)x(3.5-6.5) [im, and single. Budding is polar or nearly polar, with the buds sessile or on short denticles and with percurrent proliferation. Colonies are butyrous, smooth, shiny, grayish-cream, with the margin entire. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% Glucose Starch formation Urease + Co-Q: 9 (Nakase et al. 1987b). Mol% G + C: 53.3-54.1, 5 strains, JCM 6857, JCM 6858 {T^: Nakase

Fig. 374. B. yamatoana, CBS 7244. Ballistoconidia on corn meal agar. Bar = 5^m.

+

JCM 2896, JCM 5652, JCM 5975, et al. 1987b).

Dalmau plate on morphology agar: After 7 days at 17°C, yeast cells can have short hyphal outgrowths, but there is no formation of extensive pseudohyphae or true hyphae. Aerobic growth is pale yellowish-cream, dull or shiny, butyrous, flat, with a smooth surface, flat, and with the margin entire, straight or somewhat crenulate. Formation of ballistoconidia: No ballistoconidia were seen in strain CBS 7331. According to Nakase and Suzuki (1988) ballistoconidia, formed on corn meal agar, are apiculate or short ellipsoidal (broadly ellipsoidal) or ellipsoidal, (7.0-11.0) x (2.5-6.0) |im. Fermentation: absent.

Vic. Descriptions of anamorphic basidiomycetous genera and species

730

Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Nitrite + 50% Glucose Growth at 25''C + Starch formation Growth at 30°C Urease + Co-Q; 9, CBS 7331 (Nakase and Suzuki 1988). Mol% G + C: 45.8^5.9, JCM 6251 (7;^: Nakase and Suzuki 1988).

Origin of the strain studied: CBS 7331 (JCM 6251), leaf of Yucca species, R.J. Bandoni, Canada. Type strain: JCM 6251. Comments on the genus Ingold (1986) described B. ciliata as the only species of the genus Bensingtonia. Because whole-cell hydrolyzates lacked xylose and the coenzyme Q system comprised 9 isoprenologs (Boekhout 1987, 1991a), Nakase and Boekhout (1988) recombined several Sporobolomyces species of the Hntermedius' group into Bensingtonia. Conidiogenesis of the genus in its current circumscription is variable. Most species show polar conidiogenesis with percurrent or sympodial proliferation. Some species, e.g., B. ingoldii, B. miscanthi and B. subrosea, form elongated denticles similar to that described in Ballistosporomyces (Nakase et al. 1989b). Morphologically, species of Bensingtonia cannot be differentiated from many of the recently described unpigmented species of Sporobolomyces (see key to species with bilaterally symmetrical ballistoconidia, ch. 76).

731

93. Bullera Derx / T. Boekhout and T. Nakase

93. Bullera Derx T. Boekhout and T. Nakase Diagnosis of the genus Cells are ellipsoidal, subglobose, or cylindroidal. Budding is mostly polar, and the buds are sessile or on short denticles, enteroblastic, and with percurrent or sympodial proliferation. Ballistoconidia are either rotationally or bilaterally symmetrical. If rotationally symmetrical, ballistoconidia are globose to subglobose, ellipsoidal, sometimes somewhat angular, transversely reniform, flabelliform, or turbinate, and if bilaterally symmetrical, ballistospores are reniform, allantoid or lunate. Colonies are whitish, yellowish, brownish, orange or reddish, smooth, reticulate or venose, mucoid, butyrous or rather dry. Hyphae or pseudohyphae may be present. Clamp connections are absent, but present in the dikaryophase. Fermentation is absent. Diazonium blue B and urease reactions are positive. Xylose is present in whole-cell hydrolyzates. The major ubiquinone is Q-10. Type species Bullera alba (Hanna) Derx Species accepted 1. Bullera alba (Hanna) Derx (1948): see Bulleromyces albus, p. 641 2. Bullera armeniaca Buhagiar (1983) 3. Bullera crocea Buhagiar (1983) 4. Bullera dendrophila van der Walt & D.B. Scott (1970) 5. Bullera globispora Johri & Bandoni (1984) 6. Bullera megalospora Nakase & M. Suzuki (1986) 7. Bullera miyagiana Nakase, M. Itoh, Takematsu & Bandoni (1990) 8. Bullera oryzae Nakase & M. Suzuki (1985) 9. Bullera pyricola Stadelmann (1975) 10. Bullera pseudoalba Nakase & M. Suzuki (1986) 11. Bullera punicea (Komagata & Nakase) Nakase & M. Suzuki (1986) 12. Bullera sinensis Li (1982) 13. Bullera variabilis Nakase & M. Suzuki (1987) Key to species See Table 73. 1.

a b 2(1). a b 3(2). a b 4(1). a b 5(4). a b 6(5). a b 7(6). a b 8(5). a b 9(8). a b 10(9). a b 11(9). a b 12(8). a b

Nitrate assimilated, lactate not assimilated; ballistoconidia bilaterally symmetrical -^ 2 Nitrate not assimilated, lactate usually assimilated; ballistoconidia more or less rotationally symmetrical Lactose and melibiose assimilated Lactose and melibiose not assimilated -> 3 D-Xylose assimilated D-Xylose not assimilated a-Methyl-D-glucoside assimilated —> 5 a-Methyl-D-glucoside not assimilated ^ 1 5 Nitrite assimilated -^ 6 Nitrite not assimilated -^ 8 Lactose, erythritol and inositol assimilated —> 7 Lactose, erythritol and inositol not assimilated D-Glucosamine and galactitol assimilated D-Glucosamine and galactitol not assimilated L-Sorbose assimilated -^ 9 L-Sorbose not assimilated -^ 12 Lactose assimilated —» 10 Lactose not assimilated -^ 11 Inulin and glycerol assimilated Inulin and, usually, glycerol not assimilated Ethanol assimilated Ethanol not assimilated Raffinose assimilated -^ 13 Rafifinose not assimilated

-^ 4 B. pyricola:

p. 737

B. megalospora: p. 735 B. punicea: p. 739

B. crocea: p. 733 B. oryzae: p. 736 B. miyagiana: p. 736

B. alba: B. variabilis: B. sinensis: B. variabilis:

p. 732 p. 740 p. 739 p. 740

B. dendrophila: p. 733

732 13(12). a b 14(13). a b 15(4). a b

Vic. Descriptions of anamorphic basidiomycetous genera and species Inulin assimilated Inulin not assimilated —» 14 Ethanol assimilated Ethanol not assimilated Melezitose and D-glucosamine assimilated Melezitose and D-glucosamine not assimilated

B. alba: B. pseudoalba: B. variabilis'. B. armeniaca: B. globispora:

p. 732 p. p. p. p.

738 740 732 734

Table 73 Key characters of species in the genera Bulleromyces and Bullera Species

Assimilation^

Appearance ^

Gal Lac Mel Raf Mlz Inu Xyl Rha Glu Ery Met Lat Cit Ino Nit Ball. Or. Pi. Bulleromyces albus

R

-

Bullera armeniaca

R

+

B. crocea

+

R

+

+

R

-

B. dendrophila B. globispora

R

B. megalospora

B

B. miyagiana

R

B. oryzae

R

B. pyricola

B

B. pseudoalba

R

B. punicea

B

B. sinensis

R

B. variabilis

R

Growth, M o l % G + C 25°C

-

+

53.5-54.5

+

54-57

+

55-57

V

+

39^0.5

+

53

+

49-51

-

+

59-62

+

63

V

+

50-53.5

V

+

52.2-54

V

-

54-54.5

V

+

54.5-57

-

+

56-57

^ Abbreviations: Gal, galactose; Lac, lactose; Mel, melibose; Raf, raffinose; Mlz, melezitose; Inu, inulin; Xyl, D-xylose; Rha, L-rhamnose; Glu, D-glucosamine; Ery, erythritol; Met, a-methyl-D-glucoside; Lat, DL-lactate; Cit, citrate; Ino, inositol; Nit, nitrate. ^ Abbreviations: Ball., ballistospores, rotationally symmetrical (R) or bilaterally symmetrical (B); Or., orange color of colony; Pi., pink color of colony.

Systematic discussion of the species

Fermentation: absent.

93.1. Bullera alba (Hanna) Derx (1948) See Bulleromyces albus, p. 641.

Assimilation (at 17**C):

93.2. Bullera armeniaca Buhagiar (Buhagiar et al. 1983) Growth on 5% malt extract agar: After 7 days at 17°C, cells are ellipsoidal, (5.0-10.0)x(2.0^.0) ^im, and single. Budding is polar and buds are sessile or on short denticles with percurrent or sympodial proliferation. Growth is butyrous, flat, with the center somewhat raised, shiny, pinkish-orange or orange, and with the margin entire or slightly eroded. Growth on the surface of assimilation media (glucose): A thin film and a sediment are formed.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

_

+ + + +

-

+ +

_ + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

-

+ + + +

-

w + + +

-

+ n

Dalmau plate culture on morphology agar: After 7 days at 17°C, a pseudomycelium occurs with cells measuring (10-110)x(3.0-4.5)|im. Aerobic growth is orange to brownish-orange, butyrous, flat, with the center Additional assimilation tests and other growth somewhat raised, and with the margin entire, straight or characteristics: 2-Keto-D-gluconate + Nitrite + somewhat crenulate. 50% Glucose Growth at 2 5 T + Formation of ballistoconidia: Ballistoconidia, formed on corn meal, yeast-malt extract and malt extract agars, are subglobose to turbinate and measure (4.0-7.5) x (4.08.0) ^im (Fig. 375).

Starch formation + Growth at 30°C + Urease + Growth at 2>TC Co-Q: 10 (Nakase 1987). Mol% G + C: 54.3-56.6, two strains, CBS 7018, 7091 {T^: Boekhout 1991a), 55.5 (HPLC: Nakase, unpublished results).

733

93. Bullera Derx / T. Boekhout and T. Nakase

Fig. 376. B. crocea, CBS 6714. Ballistoconidia on com meal agar. Bar = 5|im. Fig. 375. B. armeniaca, CBS 7018. Ballistoconidia on com meal agar. Bar = 5|im.

Origin of the strains studied: CBS 7018, CBS 7091, cabbage, R.W.M. Buhagiar, Great Britain; CBS 7091.1, pale mutant of CBS 7091. Type strain: CBS 7091.

Assimilation (at IT^'C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n v + + + + s + + + + + n -

Comments: Besides the typical orange colored strains, pale mutants do occur. From morphological and physiological points of view, B. armeniaca comes close to B. crocea Buhagiar (Buhagiar et al. 1983). Bullera armeniaca lacks the ability to assimilate melibiose and a-methyl-D-glucoside, and salicin is only weakly assimilated. Bullera crocea does not assimilate inositol at all, whereas assimilation of this compound is delayed by B. armeniaca. The reported difference in mol% G + C of 2.5 could not be confirmed by the present author using the Tm-method. However, when analyzed by HPLC, B. crocea Additional assimilation tests and other growth has a lower mol% G + C of 51.6. These two taxa are also characteristics: + Nitrite + kept separate, because of low similarity of electrophoretic 2-Keto-D-gluconate 50% Glucose Growth at IS^C + enzyme patterns (T. Nakase, personal communication). 93.3. Bullera crocea Buhagiar (Buhagiar et al. 1983) Synonym: Bullera aurantiaca Johri & Bandoni (1984)

Growth on 5% malt extract agar: After 7 days at IT^'C, cells are ellipsoidal to subglobose, (6.0-11.0) x (4.07.0) ^m, and single. Short hyphae may occur. Budding is polar and buds are sessile or on short denticles with percurrent or sympodial proliferation. Scars may be visible. Growth is soft, butyrous to rather dry, with the center slightly raised, smooth or reticulately ridged, shiny or dull, salmon-orange, orange, and with the margin entire, straight or strongly lobate. Growth on the surface of assimilation media: A thin film and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, well-developed hyphae may be formed, with cells measuring (15-100)x(3.0^.5)|im. Aerobic growth is orange to brownish-orange, soft to dry, flat, warty or ridged, with margin entire, straight or lobate. Formation of ballistoconidia: Ballistoconidia, formed on morphology and corn meal agars, are subglobose to turbinate, and measure (4.0-8.0) x (4.0-9.0) [xm (Fig. 376). Fermentation: absent.

Starch formation + Growth at 3 OT Urease + Co-Q: 10 (Nakase 1987). Mol% G + C: 54.9-56.6, two strains, CBS 6714, 6980 {T^: Boekhout 1991a), 51.6 (HPLC: Nakase, unpublished results).

Origin of the strains studied: CBS 6714, strawberries, R.W.M. Buhagiar, Great Britain; CBS 6714.1, pale mutant of CBS 6714; CBS 6980, type of 5. aurantiaca Johri & Bandoni, stems of Urtica, R.J. Bandoni, Canada. Type strain: CBS 6714. Comments: Pale mutants occur besides the orange colored strains. CBS 6980 extensively forms hyphae on corn meal agar, on which short chains of blastoconidia are formed apically and laterally. Under TEM, cell walls of CBS 6714 are layered and electron dense. No pore structure has been observed (Boekhout, unpublished results). 93.4. Bullera dendrophila van der Walt & D.B. Scott (1970)

Synonym: Aessosporon dendrophilum van der Walt (1973)

Growth on 5% malt extract agar: After 7 days at 17°C, cells are ellipsoidal to somewhat cylindroidal, (7.013.0)x(4.5-11.5)!im, and single. Budding is polar and buds are sessile or on short denticles. Growth is mucoid, with the center somewhat raised, smooth, glossy, cream to pale grayish-brown, and with the margin entire.

Vic. Descriptions of anamorphic basidiomycetous genera and species

734

Dichrostachys cinerea, J.P. van der Walt, South Africa; CBS 6459 and CBS 6460, as Aessosporon dendrophilum, supposed diplophase of B. dendrophila, J.P. van der Walt, South Africa. Type strain: CBS 6074.

Fig. 377. B. dendrophila, CBS 6460. Ballistoconidia on corn meal agar. Bar = 5|im.

Growth on the surface of assimilation media (glucose): A thin film, ring, and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, no mycelium or pseudomycelium is formed. Cells are ellipsoidal, cylindroidal to somewhat dumb-bell-shaped, or ovoidal. Aerobic growth is cream, butyrous, shiny, flat or somewhat raised, smooth or with faint transverse striations, with the margin entire, straight or somewhat crenulate. Formation of ballistoconidia: Ballistoconidium formation is poor. Best results were obtained on corn meal agar at 17°C. Ballistoconidia are ellipsoidal to subglobose, and measure (4.5-9.0)x(5.5-10.5) ^m (van der Walt and Scott 1970). On the surface of the agar plate, ballistoconidia measure (8.5-11.0)x(9.5-13.0) fxm (Fig. 377). Fermentation: absent. Assimilation (at 17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

characteristics:

+ +

-

+ + + + +

-

+

-

+ + + + + +

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+ + + + + + + + + + s n

Comments: Selected isolates of CBS 6074 have been interpreted as the perfect state ofBullem dendrophila, viz. Aessosporon dendrophilum van der Walt (van der Walt 1973), due to the presence of germinating chlamydospores on com meal agar or potato glucose agar. However, it has not been proven that alternation of stages in the life cycle occurs in these cells, nor that ploidy differences are present. Therefore, we regard A. dendrophilum synonymous with B. dendrophila. 93.5. Bullera globispora Johri & Bandoni (1984) Growth on 5% malt extract agar: After 7 days at 17°C, cells are ovoidal, ellipsoidal, cylindroidal or subglobose, (7.0-14.0)x(3.0-8.0) [im, and single. Septate hyphae are sometimes present. Budding is polar, with sympodial or percurrent proliferation, and collarette-like scars are visible. Growth is mucoid, flat or somewhat raised, smooth, glossy, pale grayish-brown, and with the margin entire. Growth on the surface of assimilation media (glucose): A ring, a thinfilmand a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at \TC, poorly developed pseudohyphae are formed. Cells are ellipsoidal or cylindroidal, and may be septate. Aerobic growth is pale yellowish-brown, butyrous to mucoid, shiny, flat or somewhat raised, with the surface smooth, or locally somewhat venose or reticulate. The margin is entire, straight or somewhat lobate. Formation of ballistoconidia: Ballistoconidia, formed on morphology, malt extract, potato extract and corn meal agars, are subglobose, turbinate or transversely reniform, and measure (4.0-10.0)x(6.0-13.5) jim (Fig. 378). Fermentation: absent.

-

atioi1 tests and other g ro^

_ + Nitrite 2-Keto-D-gluconate Growth at 25°C + 50% Glucose + Growth at 30°C Starch formation V + Urease Growth at 3 7 T Co-Q: 10 (Nakase 1987). Mol% G + C: 38.8-40.4, two strains, CBS 6459, CBS 6074 {T^: Boekhout 1991a), 38.4 (HPLC: Nakase, unpubHshed results). Origin of the strains studied: CBS 6074, frass of larvae of Buprestidae in subcortical galleries of

Fig. 378. B. globispora, CBS 6981. Ballistoconidia on morphology agar. Bar = 5fxm.

93. Bullera Derx / T. Boekhout and T. Nakase

Assimilation (at 17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + v + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + v + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite + 50% Glucose Growth at 25T + Starch formation + Growth at 3 0 ^ v Urease + Growth at 37''C Co-Q: 10 (Nakase 1987). Mol% G + C: 52.9, one strain, CBS 6981 (7;,: Boekhout 1991a), 49.6 (HPLC: Nakase, unpublished results).

Origin of the strains studied: CBS 6981 (UBC 8079), UBC 70-8084, dead wood, B.N. Johri and R.J. Bandoni, Canada. Type strain: UBC 8079 (CBS 6981).

735

butyrous, flat and somewhat raised in the center, smooth, shiny, whitish-cream, and with the margin entire, straight or somewhat undulate. Growth on the surface of assimilation media (glucose): A thin film, islets, and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, part of the cells form short hyphal outgrowths, which may be branched. Cells are ellipsoidal, and somewhat fusiform or limoniform. Aerobic growth is cream or pale pinkish-cream, shiny, flat or with the center somewhat raised, with the margin entire or slightly eroded, and straight or somewhat crenulate. Formation of ballistoconidia: Ballistoconidia, formed on morphology, malt extract, yeast-malt extract and corn meal agars, are bilaterally symmetrical, lunate, allantoid or ellipsoidal, and measure (11.0-18.0)x(5.0-14.0) (im (Fig. 379). Fermentation: absent. Assimilation (at IT'^C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w w + + + +

-

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erj^hritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+

-

+ +

+ Comments: According to Johri and Bandoni (1984), + + V B. globispora has subglobose ballistoconidia. This feature + was considered to be an important characteristic by + + these authors. However, in the two strains studied here, + + the ballistoconidia were generally broader than long. V In this aspect they agree with the ballistoconidia of n 1 B. armeniaca, B. pseudoalba and B. sinensis. Moreover, + the ballistoconidia we observed were considerably larger (viz. 4.0-10.0x6.0-12.5 ^m) if compared with the data Additional assimilation tests and other growth presented by Johri and Bandoni (I.e., 3.5-6.0x3.5- characteristics: 6.5 [xm). Several differences were observed in the carbon 2-Keto-D-gluconate + Nitrite + Growth at 25T + assimilation pattern if compared with the data of Johri 50% Glucose V Growth at SOT and Bandoni (I.e.), viz. no assimilation of L-sorbose, Starch formation Urease + a-methyl-D-glucoside, melezitose, inulin, erythritol and Co-Q: 10 (Nakase and Suzuki 1986c). assimilation of citrate. Physiologically, B. globispora is Mol% G + C: 48.8-50.9, three strains, JCM 5269, NO-59, NO-102 (7;„ close to B. armeniaca, but it differs from that species by Nakase and Suzuki 1986c). its inability to assimilate D-glucosamine and melezitose.

93.6. Bullera megalospora Nakase & M. Suzuki (1986c) Synonym: Udeniomyces megalosporus (Nakase & M. Suzuki) Nakase & Takematsu (1992)

Growth on 5% malt extract agar: After 7 days at 17T, cells are ellipsoidal, (12-26) x (4.0-8.5) [im, and single. Budding is polar and buds are sessile, with percurrent proliferation and visible collarettes. Growth is

Fig. 379. B. megalospora, CBS 7236. Ballistoconidia on com meal agar. Bar = 5^im.

736

Vic. Descriptions of anamorphic basidiomycetous genera and species

Origin of the strains studied: CBS 7236 (JCM 5269), CBS 7339 (JCM 5272), CBS 7355 (JCM 5271), CBS 7356 (JCM 5273), all four from dead leaves of rice (Oryza satiua), T. Nakase, Japan; CBS 7340 (JCM 5711), CBS 7359 (JCM 5712), both from dead leaves of Miscanthus sinensis, T. Nakase, Japan; CBS 7363 (JCM 5870), Sasa species, T. Nakase, Japan. Type strain: JCM 5269 (CBS 7236). Comments: Bullera megalospora can physiologically be Fig. 380. B. miyagiana, CBS 7526. Ballistoconidia on malt extract agar, differentiated from B. punicea by its inability to assimilate Bar = 5^im. inositol. The other Bullera species with bilaterally symmetrical ballistospores, B. pyricola, differs by the ability Additional assimilation tests and other growth to assimilate melibiose, lactose, galactitol and inositol. characteristics: 93.7. Bullera miyagiana Nakase, M. Itoh, Takematsu & Bandoni (1990a) Growth on 5% malt extract agar: After 7 days at 17°C, cells are ellipsoidal, limoniform to subglobose, (7.0-10.0)X(5.5-6.0) |im, and single. Budding is polar, on denticles or short stalks, with percurrent proliferation. Short hyphae may be present, up to ca. 180|im long and 3.0^.0 jim wide. Growth is butyrous, flat to slightly raised, somewhat venose, dull, pale yellowish, and with the margin entire, straight or slightly crenulate. Growth on the surface of assimilation media: A ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, neither hyphae nor pseudohyphae are formed. Cells are ellipsoidal to subglobose. Aerobic growth is pale yellowish, dull, flat to slightly raised, with the margin entire, straight or somewhat crenulate. Hyphae are formed on malt extract agar and corn meal agar. Formation of ballistoconidia: Ballistoconidia, formed on malt extract agar, are rotationally symmetrical, subglobose to flabelliform, and measure (5.5-10.5)x(5.011.0)^JLm(Fig. 380). Fermentation: absent. Assimilation (at 17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + + + + + + +

-

w + + + + +

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

-

+ +

-

+ + + + + + + + + n

-

2-Keto-D-gluconate + Nitrite + Growth at 25°C + 50% Glucose Starch formation + Growth at 30°C + Urease Growth at 3 7 ^ + Co-Q: 10 (Nakase et al. 1990a). Mol% G + C: 61.4, JCM 7536 {T^{. Nakase et al. 1990a), 58.9, JCM 7536 (HPLC: Nakase et al. 1990a).

Origin of the strain studied: CBS 7526 (JCM 7536), Abies firma, R.J. Bandoni, Japan. Type strain: JCM 7536. Comments: Bullera miyagiana is close to B. oryzae, and differs by growth with ethanol, and lack of growth with D-glucosamine, galactitol and nitrate. Ballistoconidia of B. miyagiana germinate by sympodial proliferation (Fig. 380) (Boekhout 1991a). 93.8. Bullera oryzae Nakase «& M. Suzuki (1985c) Growth on 5% malt extract agar: After 7 days at 17T, cells are ellipsoidal to subglobose, (5.0-10.0)x(3.06.0) jim, and single. Budding is polar and buds are sessile or on short denticles. Growth is butyrous, flat, smooth, shiny, pale grayish-brown, and with entire margins. Growth on the surface of assimilation media (glucose): A ring, islets, a film, and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at \TQ, no pseudohyphae or true hyphae are formed, but cells may form short hyphal-like outgrowths. Cells are ellipsoidal to subglobose and frequently somewhat thick-walled with the outer cell wall layer peeling off. Aerobic growth is pale yellow or brownish-yellow, with the margin slightly discolorous, dull, somewhat raised, flat or weak venose. The margin is entire, straight, lobate or crenulate. Formation of ballistoconidia: Ballistoconidia, formed on corn meal agar, are globose to subglobose, and measure (4.5-8.0)X(4.0-6.5) ^im (Fig. 381). Occasionally, huge globose to subglobose ballistoconidia were observed on corn meal agar, measuring (10.0-13.0)x(8.0-10.0) |im (Fig. 381). Fermentation: absent.

93. Bullera Derx / T. Boekhout and T. Nakase

737

because of assimilation of nitrite. Bullera oryzae differs from both B. sinensis and B. pseudoalba by forming ballistoconidia that are more globose to subglobose. Moreover, B. sinensis can be separated by the assimilation of L-sorbose and its inability to use lactose. Bullera pseudoalba differs by growth on glycerol (Boekhout 1991a) and its inability to assimilate erythritol. Mol% G + C of Bullera alba differs by 8.3% from B. oryzae. 93.9. Bullera pyricola Stadelmann (1975) Synonyms: Udeniomyces pyricola (as U. piricola) (Stadelmann) Nakase & Takematsu (1992) Bullera grandispora Derx (1930) nomen dubium sensu B.N. Johri & Bandoni (1984)

Fig. 381. B. oryzae, CBS 7194 (top) and CBS 7342 (bottom). Ballistoconidia on corn meal agar. Bar = 5 jim.

Assimilation (at 17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + 1 + + + + + + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite + 50% Glucose Growth at 25°C + Starch formation + Growth at 30°C + Urease + Growth at 2>TC Co-Q: 10 (Nakase and Suzuki 1985c). Mol% G + C: 62.7, JCM 5281 (7;^: Nakase and Suzuki 1985c), 59.7 (HPLC: Nakase, unpublished results).

Growth on 5% malt extract agar: After 7 days at 17°C, cells are ellipsoidal, ovoidal, cylindroidal, sometimes somewhat constricted in the middle, and with the apices rounded or truncate, (9.0-35.0)x(5.0-12.0) |Jim, single or in short chains. Budding is polar with percurrent or sympodial proliferation, and with distinct annellations. Sometimes buds grow out as short hyphae. Growth is butyrous or mucoid, flat or somewhat raised, smooth, shiny, grayish-cream to pale yellowish-brown, and with the margin entire, straight or somewhat crenulate. Growth on the surface of assimilation (glucose): A ring and a sediment are formed.

media

Dalmau plate culture on morphology agar: After 7 days at 17°C, poorly developed pseudohyphae are formed. Cells are ellipsoidal, ovoidal or cylindroidal, and are sometimes rather thick-walled. Aerobic growth is pale yellowish-brown, pinkish-brown, butyrous or mucoid, flat, or somewhat raised, and smooth or somewhat reticulate in the center. The margin is entire, straight, lobate or crenulate. Formation of ballistoconidia: Ballistoconidia, formed on morphology and corn meal agars, are bilaterally symmetrical, ovoidal, ellipsoidal or allantoid, and measure (8.0-16.0)X(4.0-9.0) ^im (Fig. 382). Fermentation: absent.

Origin of the strains studied: CBS 7194 (JCM 5281), dead leaf of rice {Oryza satiua), T. Nakase, Japan; CBS 7341 (JCM 5718), CBS 7360 (JCM 5719), CBS 7361 (JCM 5728), all three from dead leaves of Miscanthus sinensis, T. Nakase, Japan; CBS 7342 (JCM 5987), leaf of Sasa species, T. Nakase, Japan. Type strain: JCM 5281 (CBS 7194). Comments: Bullera oryzae belongs to the group of species similar to B. alba, and can be readily identified

Fig. 382. B. pyricola, CBS 6784. Ballistoconidia on corn meal agar. Bar = 5|im;

Vic. Descriptions ofanamorphic basidiomycetous genera and species

738

Assimilation (at \TC) Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

-

+ + + + + +

-

AT-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+ + + +

-

+

V

-

+ + + n +

-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite + 50% Glucose Growth at 25''C + Starch formation Growth at WC Urease + Co-Q: 10 (Nakase and Suzuki 1986d). Mol% G + C: 50.2-53.5, three strains, CBS 6754, CBS 6784, CBS 6982 {T^\ Boekhout 1991a); 50.8-51.7, JCM 2958, and one other strain {T^\ Nakase and Suzuki 1986c).

Origin of the strains studied: CBS 6754, from leaf of pear tree, F. Stadelmann, Switzerland; CBS 6784, from leaf of pear tree infected by Operophthora brumata, F. Stadelmann, Switzerland; CBS 6785, from leaf of pear tree infected by Venturia pirina, F Stadelmann, Switzerland; CBS 6982, from rotten wood, originally identified as B. grandispora Derx, B.N. Johri and R.J. Bandoni, Canada. Type strain: CBS 6754. Comments: Bullera grandispora sensu Johri & Derx is considered conspecific with B. pyricola, because of about 85% DNA-DNA homology (Boekhout and Foot, unpublished results). The cell walls of CBS 6982 were found to be layered, electron-dense, and surrounded by a fibrous capsule (Boekhout, unpublished results). 93.10. Bullera pseudoalba Nakase & M. Suzuki (1986a) Growth on 5% malt extract agar: After 7 days at \TC, cells are ellipsoidal, (4.0-7.0)x(2.0-4.0)|im, and single. Budding is polar and buds are sessile or on short denticles. Growth is mucoid or butyrous, flat or slightly raised, smooth, shiny, brownish-yellow, and with the margin entire. Growth on the surface of assimilation media (glucose): A ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, septate hyphae occur. Cells are ellipsoidal.

Fig. 383. 5. pseudoalba, CBS 7227. Ballistoconidia on com meal agar. Bar = 5fxm.

Aerobic growth is pale yellowish to pinkish yellowbrown, butyrous, shiny,flat,smooth or weakly transversely furrowed, and with the margin entire or somewhat eroded, straight or somewhat crenulate. Formation of ballistoconidia: Ballistoconidia, formed on morphology and com meal agars, are subglobose, and measure (5.0-10.0)x(3.5-8.0) [im (Fig. 383). Fermentation: absent. Assimilation (at 17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + + + + + + +

-

+ + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+ + + + + + + + + + + n

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite 50% Glucose Growth at 25*'C Starch formation Growth at 30''C Urease + Growth at 37°C Co-Q: 10 (Nakase and Suzuki 1986a). Mol% G + C: 52.6-53.7, two strains, JCM 5290, NB-104 {T^\ and Suzuki 1986a).

+ + Nakase

Origin of the strains studied: CBS 7227 (JCM 5281), dead leaf of rice (Oryza satiua), T. Nakase, Japan; CBS 7343 (JCM 5721), CBS 7344 (JCM 5722) CBS 7362 (JCM 5723), all three from dead leaves of Miscanthus sinensis, T. Nakase, Japan. Type strain: JCM 5281. Comments: Bullera pseudoalba is similar to B. alba in morphological, physiological and biochemical aspects. Bullera pseudoalba differs from B. alba, as well as from B. oryzae and B. sinensis by the assimilation of glycol (Boekhout 1991a), the formation of blastoconidia at the apex of hyphae on corn meal agar (Boekhout 1991a), more yellowish-brown colonies, and differences

93. Bullera Derx / T. Boekhout and T. Nakase

739

in electrophoretic enzyme patterns (Nakase and Suzuki 1986a). 93.11. Bullera punicea (Komagata & Nakase) Nakase & M. Suzuki (1986c) Synonyms: Candida punicea Komagata & Nakase (1965) Sporobolomyces puniceus (Komagata & Nakase) Aheam & Yarrow apud Yarrow (1972) Udeniomyces punicea (Komagata & Nakase) Nakase & Takematsu (1992)

Growth on 5% malt extract agar: After 7 days at 17°C, cells are ellipsoidal to cylindroidal, rarely subglobose, (10.0-17.0)x(5.5-8.5)|im, and single. Budding is polar, rarely lateral, and buds are sessile, with percurrent proliferation and scars. Cells may form hyphae of up to ca. 75 |im long and 4.0-7.0 fxm wide. Growth is butyrous, somewhat raised, smooth, dull, pale pinkish-cream, and with the margin entire. Growth on the surface of assimilation media (glucose): A weak ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, no true mycelium or pseudomycelium is formed, but short hyphal cells may be present. Cells are ellipsoidal, ogival or limoniform. Aerobic growth is cream, butyrous, shiny, flat or somewhat raised, with the margin smooth and entire. Formation of ballistoconidia: Ballistoconidia, formed on corn meal agar, are bilaterally symmetrical, allantoid, clavate or ellipsoidal, (10.0-14.0)x(5.5-7.0) pim (Fig. 384). Fermentation: absent. Assimilation (at 17**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V

+ + + +

-

+ +

-

+

-

+ + + V

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mamiitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

+

-

+ V

+ +

-

+ +

-

+ V V

n +

-

Fig. 384. B. punicea, CBS 5689. Ballistoconidia on com meal agar. Bar = 5|im.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Urease + 50% Glucose Nitrite + Starch formation + Growth at 25°C Co-Q: 10 (Nakase and Suzuki 1986d). Mol% G + C: 53.9-54.4 (T;^: Nakase 1989), 53.3 (HPLC, Nakase unpublished results).

Origin of the strain studied: CBS 5689 (JCM 1535), frozen food, K. Komagata and T. Nakase, Japan. Type strain: CBS 5689. Comments: In the original diagnosis of Candida punicea {= Bullera punicea), a type was not designated. However, only one strain was listed by the original authors (Komagata and Nakase 1965). This strain, CBS 5689, was recently designated the neotype (Boekhout 1991a). Carotenoid composition, cell wall composition, and physiological characteristics were considered as indicative for affiliation of this strain with Bullera by Fiasson (1972), Weijman and Rodrigues de Miranda (1983) and Stadelmann (1975), respectively. 93.12. Bullera sinensis Li (1982) Synonyms: Bullera alba (Hanna) Derx var. lactis Li (1982) Bullera derxii Nakase & M. Suzuki (1986a)

Growth on 5% malt extract agar: After 7 days at 17°C, cells are ellipsoidal, (4.5-10.0)x(3.0-5.0)^Lm, and single. Budding is polar, and with buds sessile or on short denticles and with percurrent or sympodial proliferation. Growth is mucoid, glossy, pale yellowish-brown, with the margin entire. Growth on the surface of assimilation media (glucose): A thin film, islets and a sediment are formed. Dalmau plate on morphology agar: Poorly developed pseudohyphae are formed in some strains. Cells are ellipsoidal. Aerobic growth is yellowish to pinkish-cream, mucoid, glossy, flat or with the center somewhat raised, smooth or weakly transversely striated. The margin is entire, straight or crenulate. Formation of ballistoconidia: Ballistoconidia, formed on corn meal, potato extract and morphology agars, are flabelliform, somewhat turbinate or globose to subglobose, and measure (3.0-7.0)x(3.0-7.0) jim (Fig. 385).

740

Vic. Descriptions of anamorphic basidiomycetous genera and species

93.13. Bullera variabilis Naliase & M. Suzuki (1987d)

Fig. 385. B. sinensis, CBS 7225. Ballistoconidia on corn meal agar. Bar = 5 ^xm.

Fermentation: absent.

Assimilation (at 17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + +

-

+ + +

V

+ + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

n

-

+ + + + + + + + + + + + + + n

-

growth

2-Keto-D-gluconate + Nitrite 50% Glucose Growth at 2 5 T Starch formation + Growth at WC Urease + Growth at 37''C Co-Q: 10 (Nakase and Suzuki 1986d). Mol% G + C: 54.5-56.8, JCM 5280 {T^\ Nakase and Suzuki CBS 7237, CBS 7238 {T^: Nakase et al. 1990c), 54.3-54.9 Nakase et al. 1990c).

Growth on 5% malt extract agar: After 7 days at 17°C, cells are ellipsoidal, fusiform, straight or somewhat curved, (5.0-13.5)x(3.0-5.0)|im, and single. Budding is polar or lateral, and buds are sessile or on denticles, which may be sympodially branched. Hyphal outgrowths are sometimes present. Growth is butyrous, flat or somewhat raised, smooth, shiny, pale yellowish-brown to pinkish yellow-brown, and with the margin entire, straight or somewhat undulating. Growth on the surface of assimilation media (glucose): A ring, islets, a thin film, and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, irregularly branched pseudohyphae may be present, made up of cells measuring (15-110)x(3.05.5) [im. Cells have variable shapes including fusiform, ellipsoidal, allantoid or subglobose. Aerobic growth is yellowish-cream, butyrous, dull or shiny, flat or somewhat raised, smooth or weakly transversely wrinkled. The margin is smooth, straight or somewhat crenulate. Formation of ballistoconidia: Ballistoconidia, formed on com meal agar and potato dextrose agar, are flabelliform, transversely reniform, or somewhat turbinate, frequently somewhat angular, and measure (3.5-8.0)x(4.59.0) ^im (Fig. 386). Fermentation: absent.

+ +

1986a), (HPLC:

Origin of the strains studied: CBS 7225 (JCM 5280), CBS 7345 (JCM 5734), CBS 7358 (JCM 5279), all three from dead leaves of rice (Oryza sativa), T. Nakase, Japan; CBS 7346 (JCM 5874), dead \Q2if of Miscanthus sinensis, T. Nakase, Japan; CBS 7237, from Coccinella, M. Li, China; CBS 7238, from leaf of wheat {Triticum sp.), M. Li, China. Type strain: CBS 7238. Comments: Bullera sinensis is similar to B. alba and can be differentiated from the latter species by lack of growth on lactose and inulin, and by the ballistoconidia which are generally somewhat broader than long. Moreover, the colony on morphology agar is slightly more pinkish. Ballistoconidia were not observed in the type strains of B. sinensis and B. alba var. lactis. Because of similarities in the nutritional physiology (Boekhout 1991a) and electrophoretic enzyme patterns (Nakase et al. 1990c), B. derxii and B. alba var. lactis are considered synonyms of B. sinensis.

Assimilation (at 17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + v + + + + + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

n -/I v V + + + + + + + + + + n -

growth

2-Keto-D-gluconate + Nitrite 50% Glucose Growth at 25''C + Starch formation + Growth at WC Urease + Co-Q: 10 (Nakase and Suzuki 1987d). Mol% G + C: 55.9-56.9, three strains, JCM 5275, NO-43, NO-11 {T^\ Nakase and Suzuki 1987d).

93. Bullera Derx / T. Boekhout and T. Nakase

Fig. 386. B. variabilis, CBS 7354. Ballistoconidia on com meal agar. Bar = 5|im.

Origin of tlie strains studied: CBS 7354 (JCM 3914), dead base of bamboo culm, R.J. Bandoni, Canada; CBS 7347 (JCM 5275), dead leaf of rice {Oryza satiua), T. Nakase, Japan; CBS 7364 (JCM 5984), dead leaf of Sasa sp., T. Nakase, Japan; CBS 7365 (JCM 7265), CBS 7366 (JCM 7266), CBS 7367 (JCM 5661), all three from dead leaves of Miscanthus sinensis, T. Nakase, Japan. Complementary mating types: CBS 7347 and CBS 7367. Type strain: JCM 5275. Comments: Bullera variabilis can be readily recognized by its somewhat angular ballistoconidia. Mating and dikaryon formation were observed to occur between CBS 7357 and CBS 7367 on corn meal agar. Dikaryotic hyphae are regularly septate, with clamp connections at the septa, and with cells measuring (40-120)x(2.0-3.0)|im. Cylindrical-lageniform and subglobose dikaryotic cells, measuring (7.0-27.0) x (4.0-6.5) jim, are formed laterally and terminally on the hyphae or hyphal branchlets. However, no basidia were observed. Septal pores are dolipores with parenthesomes made up of U-shaped vesicles (Boekhout et al. 1991a, Boekhout 1991a). Comments on the genus Derx (1930) defined Bullera by the rotational symmetry of the ballistoconidia. However, in the present circumscription, the genus also contains species with bilaterally

741

symmetrical ballistoconidia. These species, viz. B. megalospora, B. pyricola and B. punicea, alternately placed in the genus Udeniomyces by Nakase and Takematsu (1992), are additionally characterized by the formation of annellidic scars (Boekhout 1991a). Color of the colonies, also used to differentiate Bullera and Sporobolomyces, is not a good discriminative character. Bullera armeniaca and B. crocea have orange colored colonies. Moreover, B. alba (= Bulleromyces albus) was found to contain |3-carotenoids, y-carotenoids and torulene (Fiasson 1972). Presence of xylose in whole-cell hydrolyzates is a reliable character to differentiate Bullera from Sporobolomyces (Weijman and Rodrigues de Miranda 1983, Suzuki and Nakase 1988a). Recently, it became clear that the septal pore of the dikaryophase of Bullera is a dolipore, with a parenthesome made up of U-shaped vesicles (Boekhout et al. 1991a). Additional characters were found in the metabolism of D-glucuronic acid (Golubev 1989b), sensitivity to killer toxins (Golubev and Kuznetsova 1989, Golubev 1990a) and nucleotide sequences of 5S rRNA (Gottschalk and Blanz 1985). The life cycle is usually heterothallic, and comprises mating of compatible yeast strains, and formation of dikaryotic hyphae and basidia in which karyogamy and meiosis occur. In addition, selfsporulating strains occur (Boekhout et al. 1991a). The presumed homothallic life cycle of B. dendrophila (van der Walt 1973) is not accepted, as there is no experimental evidence for a sexual cycle. Editors' note Based on nucleotide sequence analysis of 18S rDNA (Suh and Nakase 1995) and partial sequences of 26S rDNA (G. Scorzetti and J.W. Fell, unpublished), Udeniomyces is related to Cystofilobasidium and Mrakia and well separated from Bullera. Consequently, the separate designation of Udeniomyces appears correct, but the information was received too late for inclusion in this edition.

742

Vic. Descriptions of anamorphic basidiomycetous genera and species

94. Cryptococcus Vuillemin J.W. Fell and A. Statzell-Tallman Diagnosis of the genus Cells are spheroidal, ovoidal or elongate. Reproduction by multilateral or polar budding; pseudo- or true hyphae may develop. Ascospores, ballistospores and ballistoconidia are not formed. Colony color on solid media may be white or cream, and some strains produce red, yellow or brown pigments. All species utilize D-glucuronate and most species synthesize starch; those species that do not synthesize starch utilize inositol, a combination that distinguishes those species from Rhodotorula spp. (Table 74). Fermentative ability is lacking. Xylose is present in cell hydrolyzates. Diazonium blue B and urease reactions are positive. Coenzymes Q-9 and Q-10 are present. Some species are anamorphic states of Filobasidium, Filobasidiella, Cystofilobasidium, and other teleomorphic genera in the Tremellales and Filobasidiales. Table 74 Key characteristics of the genera Cryptococcus and Rhodotorula Starch formation

Assimilation

Tables

Inositol

D-Glucuronate

+

+

Cryptococcus: (1) nitrate positive, Table 76, p. 745; (2) nitrate negative, Table 77, p. 745

+

+

Cryptococcus: Table 79, p. 746

-

+

Cryptococcus: Table 78, p. 746 Rhodotorula: (1) nitrate positive. Table 90, p. 804; (2) nitrate negative, Table 91, p. 804

-

+

Rhodotorula: (1) nitrate positive. Table 88, p. 803; (2) nitrate negative. Table 89, p. 803

+

-

Rhodotorula: Table 87, p. 803

Type species Cryptococcus neoformans (Sanfelice) Vuillemin Species accepted 1. Cryptococcus aerius (Saito) Nannizzi (1927) 2. Cryptococcus albidosimilis Vishniac & Kurtzman (1992) 3. Cryptococcus albidus (Saito) C.E. Skinner (1947) 4. Cryptococcus amylolentus (van der Walt, D.B. Scott & van der Klift) Golubev (1981) 5. Cryptococcus antarcticus Vishniac & Kurtzman (1992) 6. Cryptococcus aquaticus (Jones & Slooff) Rodrigues de Miranda & Weijman (1988) 7. Cryptococcus ater (Castellani ex Cooke) PhafF& Fell (Lodder 1970) 8. Cryptococcus bhutanensis S. Goto & Sugiyama (1970) 9. Cryptococcus consortionis Vishniac (1985) 0. Cryptococcus curvatus (Diddens & Lodder) Golubev (1981) 1. Cryptococcus dimennae Fell & PhafF(1967) 2. Cryptococcus feraegula Saez & Rodrigues de Miranda (1988) 3. Cryptococcusflavus(Saito) Phaff & Fell (1970) 4. Cryptococcus friedmannii Vishniac (1985) 5. Cryptococcus fuscescens Golubev (1984) 6. Cryptococcus gastricus Reiersol & di Menna (1958) 7. Cryptococcus giluescens Chernov & Bab'eva (1988) 8. Cryptococcus heveanensis (Groenewege) Baptist & Kurtzman (1976) 9. Cryptococcus huempii (Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989) 20. Cryptococcus humicolus (Daszewska) Golubev (1981) 21. Cryptococcus hungaricus (Zsolt) Phaff & Fell (1970) 22. Cryptococcus kuetzingii Fell & Phaff (1967) 23. Cryptococcus laurentii (Kufferath) C.E. Skinner (1950) 24. Cryptococcus luteolus (Saito) C.E. Skinner (1950)

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

1A1>

25. Cryptococcus macerans (Frederiksen) Phaff & Fell (1970) 26. Cryptococcus magnus (Lodder & Kreger-van Rij) Baptist & Kurtzman (1976) 27. Cryptococcus marinus (van Uden & Zobell) Golubev (1981) 28. Cryptococcus neoformans (Sanfelice) Vuillemin (1901): see Filobasidiella neoformans, p. 656 29. Cryptococcus podzolicus (Bab'eva & Reshetova) Golubev (1981) 30. Cryptococcus skinneri Phaff & do Carmo-Sousa (1962) 31. Cryptococcus terreus di Menna (1954) 32. Cryptococcus uniguttulatus (Zach) Phaff & Fell (1970): see Filobasidium uniguttulatum, p. 667 33. Cryptococcus vishniacii Vishniac & Hempfling (1979) 34. Cryptococcus yarrowii A. Fonseca & van Uden (1991) Key to species See Table 75. 1.

a b 2(1). a b 3(2). a b 4(3). a b 5(4). a b 6(5). a b 7(6). a b 8(7). a b 9(8). a b 10(6). a b 11(10). a b

Starch synthesized -^ 2 Starch not synthesized -> 37 (Table 79) Inositol assimilated -^ 3 Inositol not assimilated -^ 30 (Table 78) Nitrate assimilated -> 4 (Table 76) Nitrate not assimilated —> 15 (Table 77) Sucrose assimilated -^ 5 Sucrose not assimilated -^ 13 Maltose assimilated —> 6 Maltose not assimilated -^ 12 Colony color red —^ 7 Colony color not red - ^ 1 0 Monokaryotic teliospores formed Monokaryotic teliospores not formed -^ 8 Erythritol assimilated Erythritol not assimilated —» 9 Melibiose assimilated Melibiose not assimilated Teliospores formed Teliospores not formed -^ 11 D-Glucosamine assimilated D-Glucosamine not assimilated

12(5). a b 13(4). a b 14(13). a b 15(3). a b 16(15). a b 17(16). a b

Galactose assimilated Galactose not assimilated D-Glucitol assimilated -^ 14 D-Glucitol not assimilated A/^-Acetyl-D-glucosamine assimilated A'^-Acetyl-D-glucosamine not assimilated Colony color red Colony color not red - ^ 1 6 Maltose assimilated -^ 17 Maltose not assimilated -^ 29 Sucrose assimilated -^ 18 Sucrose not assimilated

18(17). a b 19(18). a b 20(19). a b 21(20). a b 22(19). a b 23(18). a b 24(23). a b

Melibiose assimilated ^ 19 Melibiose not assimilated -^ 23 Lactose assimilated ^ 20 Lactose not assimilated -^ 22 A/^-Acetyl-D-glucosamine assimilated —> 21 A'^-Acetyl-D-glucosamine not assimilated Erythritol assimilated Erythritol not assimilated Saccharate assimilated Saccharate not assimilated Lactose assimilated ^ 24 Lactose not assimilated -^ 27 Erythritol assimilated —> 25 Erythritol not assimilated -^ 26

Cystofilobasidium capitatum:

p. 648

C. macerans:

p. 760

Cystofilobasidium bisporidii: Cystofilobasidium infirmominiatum: Cystofilobasidium lari-marini:

p. 646 p. 650 p. 652

fiorifiyrme: p. C. albidus: p. C albidosimilis: p. C antarcticus: p. Mrakia fi-igida: p. C. kuetzingii: p.

Filobasidium

666 748 747 749 676 759

C.

p. p. p. p.

C. gastricus: C. giluescens:

p. 755 p. 756

fiiscescens: C. terreus: C. feraegula: C. hungaricus:

C. laurentii: C. humicolus: C. podzolicus: C. luteolus: C. amylolentus:

p. p. p. p. p.

754 764 753 758

759 757 762 760 749

E

Table I 5 Key characters of species in the genus Cyyptococcus

Species

Cyyptococcus aerius C. albidosimilis C. albidus C. amylolentus C. antarcticus C. aquaticus C. ater C. bhutanensis C. consortionis C. curuatus C. dimennae C. feraegula C. j a w s C. friedmannii C. fuscescens C. gastricus C. gilvescens C. heueanensis C. huempii C. humicolus C. hungaricus C. kuetzingii C. laurentii C. luteolus C. macerans C. magnus C. marinus Filobasidiella neoformans Cyyptococcus podzolicus C. skinneri C. terreus C. uniguttulatus C. uishniacii C. yarrowii

Culture colora

Pseudohyphae

c-ylt

Starch formation

Assimilation Gal

Suc

Ma1

Lac

Me1

Raf

Mlz

Xyl

Ara

Rib

Rha

Gln

N-A

S

V

t i v

w -

n -

t

+

W

c-ylt w-c w-c Y -C c-b c-bu

+ f i t +

+ i i t

+ n t n

+ + +

+

?

t

t

b

-

i

2.9.

V

+

t

+

-

+

V

t

i

t

i

t

t

-

-

v s +lw

s

-

-

s

-

+/w

v +

i + l w t t -

i

i

+

t

t

w

-

i

ws

+

t

+

w

+

-

-

v

i

v

-

n

-

S

S

f

-

+

-

-

i

i

t

t

-

+ t

-

+ +

t

-

i

-

+

-

-

W

-

-

rud

t

i

+ i

i

+ -

+ v

w -

-

t

y

-

-

i

+ i

+ t

+

-

t f

t

t

V

t

-

-

V

t

i

t

-

v

t -

-

i

i

i

i i

i

+

+ v i

+ t n

+ t i +

i

-

t

+ S

t

-

+

i -

w i

+ +

t

t

-

+

+

-

-

-

-

+ v +

+ +

-

t

s i

i

-

i

+

W

-

-

t +

-

+ + t

n i -

+ n w

t i t

+ t i i

Abbreviations: b, brown; bu, buff; c, cream; o, orange; pc, pinkish-cream; r, reddish; t, tan; w, white; y, yellow. Abbreviation: rud, rudimentary pseudomycelium. Abbreviations: Gal, galactose; SUC,sucrose; Mal, maltose; Lac, lactose; Mel, melibiose; Raf, raffinose; Mlz, melezitose; Xyl, o-xylose; Ara, o-arabinose; Rib, o-ribose; Rha, L-rhamnose; Gln, D-glucosamine; N-A, N-acetyl-o-glucosamine; Ery, erythritol; Glu, o-glucitol; Glo, o-gluconate; Ino, inositol; Nit, nitrate; Sac, saccharate; D-G, o-glucuronate. a

s

i

-

i

+ +

+ +

-

t

+ + +

-

t

n -

+

+

t v

i

i

i f

+ i + + t + i l w t t i s t +

-

i

-

i

v

V

i

-

-

ilw

+

t

t

w

i

-

-

n

-

t + -

+

+

i

t -

t

+

-

t + t s

+lw

ilw

-

+

i

ws

-

-

i

t

-

C

i

-

b-Y

rud

f + i t +

+

-

C

i + i + v

-

+

w-c

D-G

-

i

i

Sac

-

S

Y r-o C-t c-yip4 c-ylt-b r-P C-t cib-y w-c w-ch w-c b-cly-t w-c

Nit

n

i

rud

Ino

-

t

0

C

Glo

-

C

bu cly-t cly-by clt

Glu

+ rud

blY t-pc

Ery

Q

: ;

$

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

745

Table 76 Species of Cryptococcus with the following characteristics: starch formation +, inositol +, D-glucuronate +, nitrate + Species

Cryptococcus albidosimilis C. albidus C. antarcticus C. feraegula C. fuscescens C. kuetzingii C. macerans C. terreus Cystofilobasidium bisporidii C. capitatum C. infirmo-miniatum C. lari-marini Filobasidiumfloriforme Mrakia frigida

Starch formation

Colonies red

Teliospores ^

+

-

-

+/w + + + + + + +

-

+

-

+ + + + +

+ +

D-G

Nit

Gal

Sue

Mai

Mel

Gin

A^-A

Ery

Glu

+

+

+

-

+

+

w

-

n

-

+

+ + + + + + + +

+ + + + + + + +

+ +

+ +

V

+

-

-

het

+ + + + + + + +

ss het ss het, hom ss

+ + + + w/-

+ + + + +

+ + + + +

+

+

-

-

Assimilation^ Ino

V

V

+/w V

+ + + + + +

+ +

+

-

V

+

+

+ + + + +

+ + + +

-

V

-

-

-

w

-

+

+

V

-

-

-

n

-

+ n

-

+ + + +

n n

-

+ + + + +

+

-

+ s

V

+

n +

^ Teliospores: hom, homothallic; het, heterothallic; ss, self-sporulating. ^ Abbreviations: Ino, inositol; D-G, D-glucuronate; Nit, nitrate; Gal, galactose; Sue, sucrose; Mai, maltose; Mel, melibiose; Gin, D-glucosamine; N-K, A'^-acetyl-D-glucosamine; Ery, erythritol; Glu, D-glucitol.

Table 77 Species of Cryptococcus with the following characteristics: starch formation +, inositol +, D-glucuronate +, nitrate Species

Starch formation

Cryptococcus amylolentus C ater C. curuatus C. dimennae C. gastricus C giluescens C heueanensis C. humicolus C. hungaricus C. laurentii C luteolus C. magnus C podzolicus C skinneri Filobasidium capsuligenum F uniguttulatum Filobasidiella neoformans

Colonies red

Assimilation^ Ino

D-G

Nit

Sue

Mai

Lac

Mel

Raf

Mlz

Ara

Rha

+ + + + + + + + + + + + + +

+ +/w + + + + + + + + + + + +

+ + + + + + + + + + + + + +

-

+ + +

+ +/w

+ + +

s + +

-

+ + + + + + +

+ + + + + + + + +

-

V

V

V

-

+ +/w + +

+

V

V

V

+

+ +

+ + + + + + + + +

-

+

+ +

+ +

+ +

-

+ +

Gin N-A

Ery

Sac

-

+

-

w

+ +

n + s

-

-

+

-

V

+ + +

-

+

-

+ +

-

+

+ + + + +

+

-

-

-

-

+ +

-

-

V

+

+ +

-

+

-

+ + +/w + V

V

+ + + + +

V

V

+ s

+ +

V

-

-

-

+

+

+ s

+ +

-

-

+

n

-

+ +

4-/W

-

-

+

+

-

-

-

-

-

+ +

n +

w + +

+ n

V

V

V

-

+ + + +

-

n n n

^ Abbreviations: Ino, inositol; D-G, D-glucuronate; Nit, nitrate; Sue, sucrose; Mai, maltose; Lac, lactose; Mel, melibiose; Raf, raffinose; Mlz, melezitose; Ara, D-arabinose; Gin, D-glucosamine; A'^-A, A/^-acetyl-D-glucosamine; Ery, erythritol; Sac, saccharate. 25(24). a b 26(24). a b 27(23). a b

D-Arabinose assimilated D-Arabinose not assimilated D-Glucosamine assimilated D-Glucosamine not assimilated Melezitose assimilated —» 28 Melezitose not assimilated

C. heueanensis: C. curuatus: C. ater: C magnus:

p. 756 p. 752 p. 750 p. 761

Filobasidium capsuligenum: p. 664

746

Vic. Descriptions of anamorphic basidiomycetous genera and species Table 78 Species of Cryptococcus with the following characteristics: starch formation +, inositol - , D-glucuronate +

Species

Starch formation

Cryptococcus aquaticus C. bhutanensis C. consortionis C. friedmannii C. huempii C. uishniacii Mrakia frigida

Assimilation^ Ino

D-G

Mai

Nit

Xyl

Mel

Rha

A^-A

Glu

+ + + + + + +

^ Abbreviations: Ino, inositol; D-G, D-glucuronate; Nit, nitrate; Mai, maltose; Mel, melibiose; Xyl, D-xylose, Rha, L-rhamnose; N-A, A^-acetyl-Dglucosamine; Glu, D-glucitol.

Table 79 Species of Cryptococcus with the following characteristics: starch formation - , inositol +, D-glucuronate + Species

Cryptococcus C flauus C. marinus C yarrowii

aerius

Pseudozyma tsukubaensis P. fusiformata P. antarctica

Starch formation

Ino

D-G

Assimilation^

-

+ + + + + + +

+ + + + + + +

Nit

Mai

Rib

Rha

Ery

Glu

+

+ +

s + +

+ + +

-

-

-

-

+ + + +

-

+ + + +

-

+ + + +

+ + +

+ + + + +

+

-

+ +

^ Abbreviations: Ino, inositol; D-G, D-glucuronate; Nit, nitrate; Mai, maltose; Rib, ribose; Rha, L-rhamnose; Ery, erythritol; Glu, D-glucitol. 28(27). a b 29(16). a h 30(2). a b 31(30). a b 32(31). a b 33(32). a b 34(33). a b 35(33). a b 36(30). a b 37(1). a b 38(37). a b 39(38). a b 40(39). a b 41(40). a b 42(39). a b 43(38). a b

L-Rhamnose assimilated L-Rhamnose not assimilated Raflfinose assimilated Raflfinose not assimilated Maltose assimilated -^ 31 Maltose not assimilated ^36 D-Xylose assimilated -^ 32 D-Xylose not assimilated Melibiose assimilated Melibiose not assimilated —» 33 A/^-Acetyl-D-glucosamine assimilated —» 34 A/^-Acetyl-D-glucosamine not assimilated - ^ 3 5 L-Rhamnose assimilated L-Rhamnose not assimilated D-Glucitol assimilated D-Glucitol not assimilated Nitrate assimilated Nitrate not assimilated Inositol and D-glucuronate assimilated ^38 Inositol or D-glucuronate assimilated or both not assimilated Nitrate assimilated -^ 39 Nitrate not assimilated -^ 43 Erythritol assimilated -^ 40 Erythritol not assimilated -^ 42 L-Rhamnose assimilated L-Rhamnose not assimilated -^ 41 D-Glucitol assimilated D-Glucitol not assimilated D-Ribose assimilated D-Ribose not assimilated Maltose assimilated Maltose not assimilated

Filobasidiella neoformans: Filobasidium uniguttulatum: C dimennae: C. skinneri:

656 667 753 763

C uishniacii: C. aquaticus:

765 750

C. huempii: C friedmannii: C. bhutanensis: C. uishniacii: Mrakia frigida: C consortionis:

757 754 751 765 676 751

Rhodotorula:

p. 800

antarctica:

p. 791

Pseudozyma

Pseudozyma fusiformata: Pseudozyma tsukubaensis: C. aerius: C. yarrowii: C. flauus: C. marinus:

p. p. p. p. p. p.

793 795 747 765 754 762

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

Systematic discussion of the species 94.1. Cryptococcus aerius (Saito) Nannizzi (Pollacci & Nannizzi 1927) Synonyms: Torula aeria Saito (1922) Torulopsis aeria (Saito) Lodder (1934) Paratorulopsis aeria (Saito) Novak & Zsolt (1961) Cryptococcus albidus (Saito) C.E. Skinner var. aerius (Saito) Phaff & Fell (1970)

Growth in malt extract: After 3 days at 20°C, the cells are globose to ovoidal, (3.4-9.4) x (4.0-10.1)(im and may be single, in pairs and often in small clusters or in short chains. Usually a small amount of sediment is formed. After one month a moderate ring, no film or a few moist islands and a moderate to heavy sediment are present. Growth on malt agar: After one month at 20''C, the streak culture is cream-colored to slightly yellowish or buff, mostly smooth, highly glossy, soft, with the margin entire or sometimes rough and wrinkled with an irregular margin. Slide culture on potato agar: Pseudomycelium is absent. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s + + + + + + + + s + + s s + w

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s s s + + + s + + s + + + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate v Gelatin liquefaction n Saccharate + Urease + D-Glucuronate + Growth at 30''C + 50% (w/w) glucoseGrowth at 2>TC yeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Yamada and Kondo 1972a). Mol% G + C: 55.5 {T^\ Nakase andKomagata 1968b); 54.3 {T^\ Sugita et al. 1992). Cell hydrolyzates: Not determined.

lAl

however, LSU rDNA nucleotide sequence analysis in our laboratory (unpublished) demonstrated that the two taxa are phylogenetically distinct and separate species. The two species can be separated by abilities to produce starch and grow in vitamin-free media. 94.2. Cryptococcus albidosimilis Vishniac & Kurtzman (1992) Growth in 1% glucose-yeast extract-peptone water: The cells are ovoid, encapsulated and functionally monopolar. The organisms slowly produce a scanty annulus and a little sediment. Growth on 1% glucose-yeast extract-peptone agar: The colony is mucoid and shining white. The average size of the cells is 6.6x4.9 |im. Neither mycelium nor pseudomycelium is formed. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w/-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n +/w

Additional assimilation tests and other growth characteristics: L-Lysine 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate n Starch formation Saccharate n Urease D-Glucuronate + Gelatin liquefaction Xylitol w/Thiamine-free L-Arabinitol 0.01% Cycloheximide 50% (w/w) glucosen yeast extract agar Growth at 25''C 25"C 10% NaCl/5%) glucose n Growth at 30°C Cadaverine + Growth at 37T Creatine Co-Q: Not determined. Mol% G + C: 55 (BD: Vishniac and Kurtzman 1992). Cell hydrolyzates: Not determined.

+ s

Origin of the strain studied: Air in Tokyo (1). Type strain: CBS 155, isolated by Saito from the air.

Origin of the strain studied: Soil in Antarctica (Vishniac and Kurtzman 1992). Type strain: CBS 7711, isolated from soil from Linnaeus Terrace, Wright Valley, South Victoria Land, Antarctica (Vishniac strain MYSW A823-2Y761/70).

Comments: Cryptococcus aerius has been considered a variety of C. albidus (Rodrigues de Miranda 1984d),

Comments: This species came belatedly to our attention, therefore the above information is from the original

748

Vic. Descriptions of anamorphic basidiomycetous genera and species

description (Vishniac and Kurtzman 1992). According to this description, C albidosimilis is indistinguishable from C albidus. The authors described this strain as a new species based on a low (18%) DNA reassociation between the type strain of C. albidosimilis and C. albidus. Based on mol% G + C contents (50-55%), C albidus consists of a complex of species that is possibly reflected in the list of synonyms of C. albidus. The relationship of C. albidosimilis to these synonyms must be determined. Analysis of LSU rDNA nucleotide sequences in our laboratory (unpublished) does, however, confirm that the type strains of C. albidosimilis and C. albidus represent separate species, consistent with the reported low nDNA relatedness. 94.3. Cryptococcus albidus (Saito) C.E. Skinner (1947b) Synonyms: Torula albida Saito (1922) Torulopsis albida (Saito) Lodder (1934) Torulopsis albida (Saito) Lodder yar. Japonica Lodder (1934) Torula gelatinosa Saito (1922) Rhodotorula gelatinosa (Saito) Hasegawa, Banno & Yamauchi (1960) Torulopsis rotundata Redaelli (1925) Torulopsis liquefaciens Saito & Oda (1934) Torulopsis nadaensis Saito & Oda (1934) Torulopsis diffluens Zach (Wolfram and Zach 1934b) Cryptococcus diffluens (Zach) Lodder & Kreger-van Rij (1952) Rhodotorula diffluens (Zach) Hasegawa, Banno & Yamauchi (1960) Cryptococcus albidus (Saito) C.E. Skinner var. diffluens (Zach) Phaff & Fell (1970) Cryptococcus diffluens Zach var. urugaiensis Artagaveytia-Allende & Aciole de Queiroz (1970) Torulopsis acris var. granulosa Marcilla & Feduchy (Lodder 1970) nom. dub. Torula alpina (Griiss) Lodder (1934) nom. nud. Rhodotorula alpina (Griiss) Krasil'nikov (1954b) nom. nud. Hansenula amylofaciens Dietrichson (1954) nom. nud. Cryptococcus mucorugosus Benham (1955) nom. nud. Cryptococcus neoformans (Sanfelice) Vuillemin var. innocuous Benham (1955) nom. nud. Torulopsis dattila (Kluyver) Lodder var. armeniaca Sarukhanyan (1957) Torulopsis dattila (Kluyver) Lodder var. armeniensis Sarukhanyan (1957) Torulopsis pseudoaeria Zsolt (1958) Paratorulopsis pseudoaeria (Zsolt) Novak & Zsolt (1961) Cryptococcus terricolus Pedersen (1958) Cryptococcus genitalis Castellani (1963) nom. nud. Naganishia globosa S. Goto (1963) Cryptococcus albidus (Saito) C.E. Skinner var. oualis Sugiyama & Goto (1967) Torulopsis ptarmiganii Hedrick nom. nud.? (Barnett et al. 1990)

Growth in malt extract: After 3 days at 25°C, the cells are globose to ovoidal and single, in pairs and often in small clusters or short chains; elongate cells may be present. Some strains have small cells, e.g., (3.0-6.1)x(3.5-6.2)|im, other strains have larger cells, e.g., (3.5-8.8)x(5.5-10.2)pim to 14^im long. Usually a small amount of sediment is formed. After one month a moderate ring, no film or a few moist islands and a moderate to heavy sediment are present.

Growth on malt agar: After one month at 25°C, the streak culture is cream-colored to slightly yellowish or tan, mostly smooth, highly glossy, soft and slimy with the margin entire or sometimes rough and wrinkled with an irregular margin. Slide culture on potato agar: Pseudomycelium is absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V

+ + + +/w V V

+ +

V

+ + V V V

TV^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+/w V V V V

+ + V

+ + V

+ + +

-

+

Additional assimilation tests and other growth characteristics:

Starch formation 2-Keto-D-gluconate + +/w V 5 -Keto-D-gluconate Urease + Saccharate + Gelatin liquefaction D-Glucuronate + Thiamine-free Growth at 30°C 50% (w/w) glucose+ Growth at 37T yeast extract agar V 10% NaCl/5% glucose Co-Q: 10 (Yamada and Kondo 1972a). Mol% G + C: 53.7, C albidus, type strain, CBS 142 {T^: Nakase and Komagata 1971c); 55 (BD: Storck et al. 1969); 54.1-55.1, iC. diffluens, type strain, CBS 160; 50.5, Naganishia globosa, type strain, CBS 5106 (r^: Nakase and Komagata 1971c). Cell hydrolyzates: Xylose, mannose low, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Air (4), bumble bee (1), skin of dog (1), sputum, lung and bronchial secretion (7), patients with various diseases (4), nails (3), skin (1), sake moto (2), wine (2), dew-retted flax (2), leaves (2), soil (1), blue cheese {Naganishia globosa) (1), goat dung (1), washed bottle in brewery (1), purification tank for polluted water (1), unknown (4), a strain labeled Torulopsis dattila var. armeniensis of unknown origin. Type strain: CBS 142, isolated by Saito from the air. Comments: As indicated by the variability in mol% G + C, C. albidus consists of a complex of species. This variability is also reflected in the large number of synonyms. Sugita et al. (1992) reported that the variety diffluens is a separate species based on limited DNA relatedness (41%) with C albidus. This observation has been confirmed by LSU rDNA nucleotide sequence analysis in

749

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

our laboratory. Similarly, we find that C terricolus is a separate species. These unpublished data were obtained after the completion of this manuscript.

cinerea L. (Wright & Arn.) near Grobersdal in the Transvaal (1) (van der Walt 1972). Type strain: CBS 6039, from frass of the tunnels of Enneadesmus forficulus.

94.4. Cryptococcus amylolentus (van der Walt, D.B. Scott & v a n der Klift) G o l u b e v (1981)

C o m m e n t s : Nucleotide sequence analysis of a region of the L S U rDNA indicates that C. amylolentus is related to Tsuchiyaea wingfieldii (Fell et al. 1995).

Synonym: Candida amylolenta van der Walt, D.B. Scott & van der Klift (1972)

Growth in 1% glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are spheroidal, ovoidal or ellipsoidal, (3.4-6.7)x(3.4-7.4) ^im. After one month there is a sediment, a ring and a few islets.

Growth on 1% glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is white to cream-colored, pasty, dull and smooth. The margin is entire to undulating.

94.5. Cryptococcus

antarcticus

Vishniac &

Kurtzman (1992) Growth in 1% glucose-yeast extract-peptone water: A scanty annulus and a little sediment are produced. The cells are ovoid, possess a scanty capsule and are functionally monopolar, budding repeatedly from the site of the primary bud scar.

Growth on 1% glucose-yeast extract-peptone agar:

D a l m a u plate culture o n corn m e a l agar: The pseudomycelium consists of ramified chains of ovoidal to elongate cells, bearing clusters of short, ovoidal blastoconidia in verticillate positions.

The colony is slightly mucoid and shining white to cream. The cells measure 4.0-7.5 jJim. Neither mycelium nor pseudomycelium is formed.

Fermentation: absent.

Assimilation:

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ + + +

-

s + s

-

+ + + s + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Er)^hritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + + V

+ + ws + + + + + +

— —

Additional assimilation tests a n d other growth characteristics : 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose

n n

-

+ +

Starch formation Urease Gelatin liquefaction Growth at 3 0 T Growth at 3>TC

+ +

-

ws

-

w

Co-Q: Not determined. Mol% G + C: 55.1, type strain {T^ ,: Meyer etal. 1984). Cell hydrolyzates: Xylose, mannose low, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Frass from tunnels of the beetle Enneadesmus forficulus Fairm. in timber of Dombeya rotundifolia (Hochst.) Harv. near Grobersdal in the Transvaal, South Africa (1); frass from the tunnels of Sinoxylon ruficorne Fahr. infesting Dichrostachys

Fermentation: absent. Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

_ _

+ + + +

_ _

V

+ n + + V

_ — +

_

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n

_ _ + V

+ + +

_ + V

+ n + +

Additional assimilation tests a n d other g;ro^ characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate D-Glucuronate Xylitol L-Arabinitol Cadaverine Creatine L-Lysine Ethylamine

+ n n n

-

+

-

+

V

50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose Starch formation Urease Gelatin liquefaction 0.01% Cycloheximide Growth at 15°C Growth at 2 0 T Growth at 30°C

n n + n n

-

+

V

-

Co-Q: Not determined M o l % G + C: 55 (r^: Vishniac and Kurtzman 1992). Cell hydrolyzates: Not determined

Origin of the strain studied: Soil in Antarctica (Vishniac and Kurtzman 1992). Type strain: C B S 7687, isolated from soil from University Valley, South Victoria Land, Antarctica (Vishniac strain M Y S W A812-20bY693/64).

750

Vic. Descriptions of anamorphic basidiomycetous genera and species

Comments: Because this species came belatedly to Assimilation: our attention, the above descriptive information is from Glucose the original description (Vishniac and Kurtzman 1992). Galactose L-Sorbose According to that description, C antarcticus is phenotyp- Sucrose ically indistinguishable from C albidus and the species Maltose distinction is based on a low (14%) DNA reassociation Cellobiose between the type strains of C antarcticus and C albidus. Trehalose Analysis of LSU rDNA nucleotide sequences in our Lactose Melibiose laboratory (unpublished) confirms that C albidus and Raffinose C antarcticus are separate species and that C antarcticus Melezitose Inulin is closely related to C bhutanensis. 94.6. Cryptococcus aquaticus (Jones & Slooff) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonyms: Candida aquatica Jones & Slooff (1966) Vanrija aquatica (Jones & Slooff) R.T. Moore (1980)

Growth in glucose-yeast extract-peptone water: After 3 days at 19''C, the cells are ovoidal or elongate, (2.7-5.4)x(8.0-13.4)[im. Budding is mono- or bipolar; multiple buds, which form on separate sites at the poles, remain attached to the parent cells. Groups of cells thus formed have a star-like arrangement. After one month a thin ring and a heavy sediment are present.

Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

-

+ + +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ V

-

+

-

+ +

-

+ +

s s

+ Additional assimilation tests and other growth characteristics:

Growth on glucose-yeast extract-peptone agar: After one month at 19°C, the streak culture is yellowish cream-colored, semi-dull, soft, and slightly wrinkled.

n Urease + 2-Keto-D-gluconate 5 -Keto-D-gluconate n Gelatin liquefaction + Biotin-free Saccharate Thiamine-free + D-Glucoronate Growth at 25*'C + 50% (w/w) glucoseGrowth at SO^C yeast extract agar 10% NaCl/5% glucose Starch formation + Co-Q: Not determined. Mol%G + C: 58.4, type strain (BD: Meyer et al. 1984). Cell hydrolyzates: Fucose, xyl(3se, mannose low (Weijman and Rodrigues de Miranda 1988)

Dalmau plate culture on corn meal agar: The pseudomycelium consists of branched short chains of ovoidal or elongate cells. The elongate cells may be flask-, dumbbell- or club-shaped, lageniform or display other unusual shapes. (Fig. 387).

Origin of the strain studied: Scum on a freshwater mountain lake in Malham Tarn, Yorkshire, England, Oct. 1962 (Jones and Slooff 1966). Type strain: CBS 5443 (Jones and Slooff strain P.181).

Fermentation:

Comments: Jones and Slooff (1966) found this species in "large quantities" in water scums in Oct. 1962 and March 1963 in one area, Malham Tarn. They did not find the fungus in scums collected in other parts of Great Britain. They speculated the presence or absence of the yeast was dependent on the types and levels of organic material in the water. Based on morphological and physiological criteria, Jones and Slooff (1966) noted the possible relationship of C aquaticus to species currently included in the genus Mrakia. This observation is in agreement with results of nucleotide sequence alignment comparisons of a region the LSU rDNA (Fell et al. 1995).

Glucose Galactose Sucrose

w V

Maltose Lactose Raffinose

94.7. Cryptococcus ater (Castellani ex Cooke) Phaff & Fell (Lodder 1970) Synonyms: Cryptococcus ater Castellani (1960) nom. nud. Cryptococcus laurentii (Kufferath) C.E. Skinner var. magnus Lodder & Kreger-van Rij forma ater Castellani ex Cooke (1966) Fig. 387. C aquaticus, CBS 6758. Cells grown on com meal agar at 19T for 2 weeks. Bar= 10 [im.

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to globose, (3.7-6.9)x(4.0-8.0)|im, rarely to 9 jim long; single or in pairs, a few short chains

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

of three and four cells. A thin ring and a little sediment are present. After one month there is a moderate ring and a thick sediment. Growth on 5% malt agar: After one month, the streak culture is cream to buff to blackish-brown, smooth, glossy, slimy (running to the bottom of the tube). The dark color infuses into the agar. Dalmau culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w -/I + + + + +

-

s

V

-

+ + V

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +/w +

-

+ +/w +

+ + Additional assimilation tests and other growth characteristics: V

2-Keto-D-gluconate Starch formation + + 5-Keto-D-gluconate + Urease + Saccharate Gelatin liquefaction + D-Glucuronate Thiamine-free + + 50% (w/w) glucoseGrowth at SO^'C yeast extract agar Growth at 37°C 10% NaCl/5% glucose Co-Q: 10 (Roeymans and Zijlstra, cited by Gueho et al. 1993). Mol% G + C: 48.6 (PC: Golubev and Vagabova 1977). Cell hydrolyzates: Xylose, mannose dominate (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Ulcers on leg of a patient (3). Type strain: CBS 4685, the original strain of Castellani (1960) isolated from multiple ulcers on the leg of a young man. Comments: Based on molecular sequence analyses, C ater may be closely related to Filohasidium elegans (Gueho et al. 1993) and C. magnus (Yamada et al. 1990a). Sequence analyses in our laboratory confirm close relationships of C ater, C. magnus, E elegans and E floriforme.

751

Growth on 5% malt agar: After one month at 25°C, the streak culture is cream to buff-colored, smooth, slightly glistening and the edges are entire. Dalmau plate culture on corn meal agar: Both true and pseudomycelium are absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + w w + + s w/-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Starch formation + 5-Keto-D-gluconate n Urease + Saccharate + Gelatin liquefaction D-Glucuronate + Growth at 30T + 50% (w/w) glucoseGrowth at 2>TC yeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 53.4 {T^: Nakase and Komagata 1971c); 54.2 (BD: Baharaeen et al. 1982). Cell hydrolyzates: Xylose, mannose dominate (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Soil sample from Laya, Bhutan, collected May 1967 (Goto and Sugiyama 1970). Type strain: CBS 6294 (Goto and Sugiyama strain H3-9-3, designated as type no. TI-0029). Comments: C. bhutanensis, based on unpublished nucleotide sequence data in our laboratory, is related to C antarcticus.

94.9. Cryptococcus consortionis Vishniac (1985a) Growth in 5% malt extract: After 3 days at 19°C, the cells are ovoidal to spherical, (3.4-6.0)x(4.0-6.7) |im, single or in pairs. Budding is polar. After one month there is little sediment but neither a ring, nor a pellicle are present. 94.8. Cryptococcus hhutanensis S. Goto & Sugiyama Growth on 5% malt extract agar: After one month at 19°C, the streak colony is cream-colored, flat and semi(1970) Growth in 5% malt extract: After 3 days at 25°C, the glistening. cells are ovoidal to spheroidal, measuring (4.0-6.7x4.7- Dalmau plate culture on corn meal agar: After one 8) (im and may be single or budding. After one month a week at 19''C, pseudomycelium is not formed. sediment is present. Fermentation: absent.

752

Vic. Descriptions of anamorphic basidiomycetous genera and species

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol + D-Glucitol a-Methyl-D-glucoside Salicin ' s D-Gluconate s DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free -

Additional assimilation tests and other growth characteristics: Urease 2-Keto-D-gluconate + Gelatin liquefaction 5-Keto-D-gluconate Thiamine-free Saccharate Growth at 1 9 T D-Glucuronate s Growth at l^C 50% (w/w) glucoseGrowth at 2TC yeast extract agar 10% NaCl/5% glucose Starch formation + Co-Q: Not determined. Mol% G + C: 56 {T^: Vishniac 1985a). Cell hydrolyzates: Not determined.

Origin of the strain studied: Soil from the dry valleys of South Victoria Land, Antarctica. Type strain: CBS 7159 (Vishniac strain MYSW A 801-3aY92). Comments: Contrary to the original description, we found this strain to produce urease and to utilize raffinose, L-rhamnose, mannitol and D-gluconate. 94.10. Cryptococcus curvatus (Diddens & Lodder) Golubev (1981) Synonyms: Candida heueanensis (Groenewege) Diddens & Lodder var. curvata Diddens & Lodder (1942) Candida curvata (Diddens & Lodder) Lodder & Kreger-van Rij (1952) Azymocandida curvata (Diddens & Lodder) Novak & Zsolt (1961) Apiotrichum curvatum (Diddens & Lodder) von Arx & Weijman (1979) Vanrija curvata (Diddens & Lodder) R.T. Moore (1980)

Growth on 1% glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is either brownish, mucoid, soft and smooth or yellowish, moist to dull, soft and wrinkled. Growth in 1% glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal to sausageshaped, often curved, (2.7-4.7)x(3.3-9.4) ^m; many cells show lateral budding on a rather broad base. A thin, dull, creeping pellicle or a thick ring is usually formed, as well as a heavy sediment.

Fig. 388. C curvatus, CBS 570. Cells grown on com meal agar at 25°C for 10 days. Bar = 5|im.

Dalmau plate culture on corn meal agar: The pseudomycelium consists either of branched chains of short pseudohyphae or long, wavy pseudohyphae bearing a few blastospores (Fig. 388). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +/w + + + + V + + V + +/w s

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/w +/w +/w

V

+/w

w/-

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Urease + 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Biotin-free D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at 3 0 T + yeast extract agar Growth at ?>TC 10% NaCl/5% glucose Starch formation + Co-Q: 10 (Yamada and Kondo 1972a). Mol% G + C: 59.8-60.3, 2 strains {T^: Nakase and Komagata 1971c); 54.2, type strain {T^: von Arx and Weijman 1979). Cell hydrolyzates: Xylose, mannose low, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Human sputum. Type strain: CBS 570, isolated in 1932 in the Netherlands from sputum of a patient with tuberculosis (Diddens and Lodder 1942).

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

Comments: Other strains have been isolated from human sputum (1), human feces (1), human urine (2), tissue culture medium (1), uterus of a cow (1) and uncertain origin (3). Nakase and Komagata (1971c) reported the species from frozen food. Nucleotide sequence analysis of the LSU rRNA indicates that C curvatus is related to the genus Trichosporon (Gueho et al. 1993). 94.11. Cryptococcus dimennae Fell & Phaff (1967) Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal, occasionally spheroidal, (3.3-6.8)x(6.011.4) |im and may be single or in pairs. No ring or pellicle and very little sediment form. After one month there is a thin ring, a thin, smooth pellicle and a moderate amount of sediment. Growth on 5% malt agar: After one month at 25°C, the streak culture is tan to pinkish-cream-colored; the surface is smooth and glossy, the texture soft and the margin entire. Dalmau culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ ws + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ v + s + + + + w + w + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation + 5-Keto-D-gluconate + Urease + Saccharate w Gelatin liquefaction D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at 30''C + yeast extract agar Growth at ?>TC 10% NaCl/5% glucose Co-Q: 9 (Roeymans and Zijlstra, cited by Gueho et al. 1993). Mol% G + C: 53.1 (7;^: Nakase and Komagata 1971c). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Isolated by M.E. di Menna in 1960 from leaves of pasture plants at Hankes Bay, New Zealand (2). Type strain: CBS 5770 (di Menna strain number 60 BGF 10).

753

Comments: M.E. di Menna (personal communication) reported the isolation of two strains of this species from pasture plants, but she was unable to isolate additional strains from the same habitat during repeated samplings over a ?>-A year period. 94.12. Cryptococcus feraegula Saez & Rodrigues de Miranda (1988) Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to spherical, measuring (3-7) x (5-8) [im, and they may be budding or single. After one month a thin ring and a slight sediment are present. Growth on 5% malt agar: After one month at 25''C, the streak culture is orange, smooth, glistening, slightly raised and the margin is entire. Dalmau plate culture on corn meal agar: After 7 days at 19°C, short pseudohyphae are formed. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + s s + s s + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ s + + + + + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n 5-Keto-D-gluconate n Saccharate + D-Glucuronate + 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Not determined.

Starch formation Urease Gelatin liquefaction Growth at 30''C Growth at 37T

Origin of the strains studied: CBS 7201, from the mouth of a rhea {Rhea americana) that was born in captivity and died in Oct. 1978 in the Zoological Park Museum, Paris, France (Saez and Rodrigues de Miranda 1988). Type strain: CBS 7202 (Saez and Rodrigues de Miranda No A3539 (B)) from a male baboon (Papio papio) that died in Nov. 1976 in the Zoological Park of Paris (Saez and Rodrigues de Miranda 1988).

754

Vic. Descriptions of anamorphic basidiomycetous genera and species

Comments: In addition to the strains listed above, Saez and Rodrigues de Miranda (1988) isolated a strain from a female aye-aye (Daubentonia madagascariensis) in the same zoo in April 1986. Sequence analysis in our laboratory indicates that C. femegula is related to Cystofilobasidium. 94.13. Cryptococcusflavus(Saito) Phaff & Fell (1970) Synonyms: Torulaflava Saito (1922) Chromotorulaflava(Saito) EC. Harrison (1928) Rhodotorula flava (Saito) Lodder (1934) Rhodotorula tokyoensis Kobayoshi ex Hasegawa var. flava (Saito) Hasegawa (1958)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal or irregular; single or in pairs, (3.25.2)X(5.0-8.8) |im. A thin ring and a little sediment begin to form. After one month a moderate yellowish ring and sediment are present. Growth on 5% malt agar: After one month at 20°C, the streak culture is light brown-yellow, semiglossy and nearly smooth with a butyrous texture and entire margins. Dalmau plate culture on corn meal agar: No pseudomycelium is present, although a few chains of cells may be formed. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + w + + + w + + w

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + w w + + + + + w + w + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate + Urease + Saccharate w Gelatin liquefaction w D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at 30T + yeast extract agar Growth at 37°C 10% NaCl/5% glucose + Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 55.0 (BD: Storck et al. 1969). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Isolated by Saito from the air in Tokyo (Saito 1922). Type strain: CBS 331.

94.14. Cryptococcus friedmannii Vishniac (1985b) Growth in 5% malt extract: After 3 days at 19°C, the cells are ovoidal, (3.4-8.0)x(4.7-11.4)|im. After one month a sediment is present. Growth on 5% malt extract agar: After one month at 19*^C, the streak culture is cream-colored, semi-glistening, smooth, flat with edges entire. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s + + + + s + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ s + + + s + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n 5-Keto-D-gluconate n Saccharate + D-Glucuronate + 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Vishniac 1985b). Mol% G + C: Not determined. Cell hydrolyzates: Not determined.

Starch formation Urease Gelatin liquefaction Growth at 25°C Growth at 30''C

+ w s

Origin of the strain studied: A single strain was isolated from an Antarctic rock bearing a cryptoendolithic lichen (Vishniac strain MYSW A801-133Y100). Type strain: CBS 7160. Comments: We found that the production of urease was weak rather than negative as reported in the original description. Analysis of the nucleotide sequence of the LSU rRNA (Fell et al. 1992) confirmed that C. friedmannii and C vishniacii are separate species. 94.15. Cryptococcus fuscescens Golubev (1984) Growth in 5% malt extract: After 3 days at 25°C, the cells are spheroidal, measuring (5.4-7.4) x (5.4-8.0) (im, and they occur singly and in pairs. After one month a sediment is present. Growth on 5% malt extract agar: After one month at 25°C, the streak culture is buff, flat, semi-glistening, butyrous and the margin is entire.

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

Dalmau plate culture on corn meal agar: After one month at 25°C, no pseudomycelium is present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w + s + v s + + -

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate n 5-Keto-D-gluconate n Urease Saccharate + Gelatin liquefaction D-Glucuronate + Growth at 25*'C 50% (w/w) glucoseGrowth at 30''C yeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. MoI% G + C: 52.4 (PC: Golubev 1984). Cell hydrolyzates: Glucose and glucosamine predominant (Golubev 1984). Monosaccharide composition of extracellular polysaccharides: Glucose, mannose, xylose, galactose and glucuronic acid (Golubev 1984).

Origin of the strain studied: Isolated by Bab'eva in 1962 from saline Takyr soil from the valley of the river Axai, Murgabski region, East Pamir, USSR. Type strain: CBS 7189 (Golubev type MGU 674; Acad. Sci. USSR strain BKM Y-2600). Comments: Golubev (1984) reported in the original description that C fuseescens is related to C. terreus, based on the brown pigmentation on old malt agar cultures, positive assimilation of D-ribose, and the inability to assimilate a-methyl-D-glucoside, sucrose and raffinose. These characteristics distinguish these two species from the other nitrate-positive cryptococcoid species. This close relationship was also observed in the nucleotide sequence analysis of the LSU rRNA of each species (Fell et al. 1992). C fuscescens differs from C terreus by the inability to assimilate L-sorbose, lactose, L-rhamnose, D-glucosamine, D-glucitol and the inability to grow in vitamin-free medium. 94.16. Cryptococcus gastricus Reiersol & di Menna (1958) Growth in 5% malt extract: After 3 days at 20°C,

755

the cells are mainly globose, but also short-ovoidal, (3.310.0) X (4.0-10.0) |im; single, in pairs or in short chains. After one month at 20°C, there is a moderate ring and a small amount of sediment. Growth on 5% malt agar: After one month at 20°C, the streak culture is pale, cream or yellow to tan-colored. The surface is smooth and glossy, the texture slightly mucoid. The growth is flat to low convex with an irregular to entire margin. Dalmau plate culture on corn meal agar: Pseudomycelium absent; a few chains of cells may be formed under the coverslip. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + v + s + + ws + -

A/'-Acetyl-D-glucosamine Methanol Ethanol bthanoi Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

v v

w/+ s +/w

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation + 5-Keto-D-gluconate w Urease + Saccharate Gelatin liquefaction D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at 20"C + yeast extract agar Growth at 2>(fC 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 51.0, strain CBS 1927; 65.5, strain CBS 2288 (BD: Storck et al. 1969). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Soil in New Zealand (1) received from di Menna; washings of the stomach of a tuberculosis patient in Norway (1). Type strain: CBS 2288 (Reiersol and di Menna strain V39) from stomach lavage of a tuberculosis patient in Norway. Comments: Because Reiersol and di Menna (1958) did not designate a type strain, Phaff and Fell (1970) designated CBS 1927 as the type culture; that strain was isolated by di Menna from soil. This designation has been followed by subsequent authors (Rodrigues de Miranda 1984d, Barnett et al. 1990) and it is listed as the type culture in the CBS and ATCC cataloges. However, the

756

Vic. Descriptions of anamorphic basidiomycetous genera and species

Reiersol and di Menna (1958) description is based on strain V39 and the statement is made "In this genus V39, according to its assimilation pattern, represents a new species". The only mention of soil isolates is: "the same species was earlier isolated in New Zealand by one of the authors (di Menna) from a soil near Dunedin. She recovered a total of six strains of the species". It is clear that the authors intended V39 to be the type strain of C gastricus. The reported strain differences in mol% G + C values suggest that the species may be genetically heterogenous and represent more than one species. In contrast to those results, our nucleotide sequence analyses (unpublished) indicate that the two strains are identical. In light of any potential differences, the name C gastricus should be retained for strain V39 (CBS 2288). 94.17. Cryptococcus gilvescens Chernov & Bab'eva (1988) Growth in 5% malt extract: Not determined. Growth on 5% malt agar: Not determined. Dalmau plate culture on corn meal agar: determined. Fermentation: absent.

Not

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + v -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n s s s s + s + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Arbutin Xylitol L-Arabinitol Cadaverine Creatinine Creatine L-Lysine 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose Starch formation

+ n + s + + n n n

Urease Gelatin liquefaction Butanediol L-Malic acid L-Tartaric acid Sodium nitrate Glucono-6-lactone D-Galacturonic acid Propanediol Imidazole 0.01% Cycloheximide 0.1% Cycloheximide Growth at 2 5 T Growth at 3 0 T

n n n n n + s n + +

Co-Q: 9 (Chernov and Bab'eva 1988). Mol% G + C: Not determined. Cell hydrolyzates: Not determined.

Origin of the strain studied: Humus from tundra, western Taimyr near Dikson, Russia. Type strain: CBS 7525. Comments: This species was brought to our attention after the completion of this manuscript. The data above were provided by D. Yarrow, Centraalbureau voor Schimmelcultures. 94.18. Cryptococcus heveanensis (Groenewege) Baptist & Kurtzman (1976) Synonyms: Torula heveanensis Groenewege (1921b) Candida heveanensis (Groenewege) Diddens & Lodder (1942) Torulopsis heveanensis (Groenewege) Mager & Aschner (1947) Cryptococcus laurentii (Kufferath) C.E. Skinner var. magnus Lodder & Kreger-van Rij (1952) Cryptococcus magnus (Lodder & Kreger-van Rij) Baptist & Kurtzman var. heveanensis (Groenewege) Golubev (1981)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to elongate, and single, in pairs or in short chains of three or four cells, (2.0-4.5)x(3.0-7.0) |im. A small ring and some sediment are present. After one month a moderate thick ring and a heavy sediment are formed. Growth on 5% malt agar: After one month the streak culture is smooth, glossy, cream-colored with a tan line in the middle; it is mucoid and the growth runs to the bottom of the slant. The margin is entire. Dalmau plate culture on corn meal agar: Short chains of cells form. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

Additional assimilation tests and other characteristics:

growth

2-Keto-D-gluconate n Starch formation + 5-Keto-D-gluconate n Urease + Saccharate + Gelatin liquefaction D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at 30°C + yeast extract agar Growth at 2)TC 10% NaCl/5% glucose w Co-Q: Not determined. Mol% G + C: 49.0 (BD: Storck et al. 1969); 52.0 (BD: Baptist and Kurtzman 1976). Cell hydrolyzates: Xylose, mannose low, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Rubber (1). Type strain: CBS 569, isolated by Groenewege (1921b) from rubber stored in a moist room. Comments: This species was originally described in the genus Torula by Groenewege (1921b). Subsequently, based on the presence of primitive pseudomycelium Diddens and Lodder (1942) transferred the species to the genus Candida. Mager and Aschner (1947) found that the species produced "starch" and then transferred the species to Torulopsis. Lodder and Kreger-van Rij (1952) considered the species as a synonym of C laurentii var. laurentii. Phaff and Fell (1970) transferred the species to synonymy with C laurentii var. magnus. Baptist and Kurtzman (1976) established Cryptococcus heveanensis based on differences in mol% G + C (C. laurentii var. laurentii, 59.7; C laurentii var. magnus, 54.1; C heveanensis, 52.0) and by differences in electrophoretic enzyme patterns. Nucleotide sequence analysis in our laboratory (unpublished) confirmed that these three species are distinct. C. heveanensis can be separated from C laurentii var. laurentii by the inability to assimilate melibiose and from C magnus by the ability of C heveanensis to assimilate L-rhamnose, erythritol and ribitol. 94.19. Cryptococcus huempii (Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989) Synonyms: Candida huempii Ramirez & Gonzalez (1984j) Candida huempii Ramirez & Gonzalez emend. Ramirez (1988)

Growth in 5% malt extract: After 3 days at 19°C, the cells are ovoidal to elongate, (2.7-6.7)x(8.0-16.1) jjim, single or in pairs. After one month a slight sediment and ring are present. Growth on 5% malt extract agar: After one month at 19°C, the streak culture is semi-glistening, cream-colored, butyrous and flat and the margin is entire. Dalmau plate culture on corn meal agar: After one month at 19°C, primitive pseudomycelium is present. Fermentation: absent.

757

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + s ws +

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

+ ws +

growth

2-Keto-D-gluconate n Starch formation + 5-Keto-D-gluconate n Urease + Saccharate Gelatin liquefaction D-Glucuronate + Growth at 2(fC + 50% (w/w) glucosen Growth at 30T yeast extract agar 10% NaCl/5% glucose s Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Glucose, mannose and xylose (Roeijmans et al. 1989).

Origin of the strain studied: A single strain was isolated from the advanced stage of decay of a fallen trunk of a laurel tree, Laurelia sempervirens Weim., in the evergreen rainy Valdivian forest of southern Chile near the Island of Chiloe in November-December 1980. Type strain: CBS 8186 (Ramirez and Gonzalez, strain 6049). 94.20. Cryptococcus humicolus (Daszewska) Golubev (1981) Synonyms: Torula humicola Daszewska (1912) Mycotorula humicola (Daszewska) F.C. Harrison (1928) Candida humicola (Daszewska) Diddens & Lodder (1942) Azymoprocandida humicola (Daszewska) Novak & Zsolt (1961) Apiotrichum humicola (Daszewska) von Arx & Weijman (1979) Vanrija humicola (Daszewska) R.T. Moore (1980) Candida suaveolens Langeron & Guerra 1938 [nee Sachsia suaveolens Lindner (1895); nee Oospora suaveolens (Lindner) Lindau (1907); nee Oidium suaveolens Krzemecki (1913); nee Cylindrium suaveolens (Krzemecki) Bums (1933)] Sporobolomyces albidus Ramirez Gomez (1957) Nadsonia slovaka Kockova-Kratochvilova & Svobodova-Polakova (1959)

Growth in 5% malt extract: After 3 days at 2 5 T , the cells are variable in form and size. They may be short-ovoidal, drop-like, lemon-shaped, long-ovoidal to cylindrical and measure (2.5-4.7)x(4.7-21.4)|im. After one month, a pellicle and sediment are present. Growth on 5% malt extract agar: After one month

758

Vic. Descriptions of anamorphic basidiomycetous genera and species

at 25°C, the streak culture is yellow, glistening to dull, smooth to densely rugoid. Dalmau plate culture on corn meal agar: Pseudomycelium and true mycelium are abundantly formed. Hyphae and pseudohyphae are often wavy in appearance. Branching is characteristically at narrow angles resulting in branches that are almost parallel to the main axes, as seen through the bottom of the plate. The ovoidal blastoconidia may form laterally on small terminal hyphal projections. (Fig. 389). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + V + w/V + + + + + +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Starch formation + 5-Keto-D-gluconate n Urease + Saccharate s Gelatin liquefaction D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at SO^'C + yeast extract agar Growth at 37°C 10% NaCl/5% glucose Co-Q: 9 (type strain); 9 (Yamada and Kondo 1972a). Mol% G + C: 58.8-63.2, 3 strains {T^: Nakase and Komagata 1971f). Cell hydrolyzates: Glucose, mannose, xylose, galactose, glucuronic acid (von Arx and Weijman 1979).

Origin of the strain studied: Soil (1). Type strain: CBS 571, isolated in Switzerland by Daszewska (1912) from heath soil. Comments: In contrast to previous editions of "The Yeasts", Apiotrichum porosum is no longer considered a synonym of C humicolus. The decision is based on LSU rRNA nucleotide sequence analyses (Fell et al. 1992) and the lack of yeastlike morphology of A. porosum. The hyphae lack blastospores and the colony has a fuzzy appearance due to the presence of tufts of aerial hyphae. Molecular sequence analysis of the LSU rRNA suggests that C. humicola is related to members of the genus Trichosporon (Gueho et al. 1993). Strains reported from other sources include: culture contaminant (1); mushrooms (2); decaying toadstools (2); skin (2); water (1). Nakase and Komagata (197If) reported isolating strains from strawberries and moss. 94.21. Cryptococcus hungaricus (Zsolt) Phaff & Fell (1970) Synonym: Dioszegia hungarica Zsolt (1957)

Growth in 5% malt extract: After 3 days at 17T, the cells are globose to ovoidal, (4.0-5.4)x(6.0-8.7) |jim, and are single, in pairs or in small clusters; budding is multilateral and occasionally a bud is connected to the parent cell by a very short neck. A slight ring and a little sediment may be present. After one month there is a moderate brownish-red ring or islets and some sediment. Growth on 5% malt agar: After one month at 20°C, the streak culture is reddish to slightly orange, semi-glossy, smooth, pasty with an entire margin. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation:

Fig. 389. C. humicolus, CBS 571. Cells grown on potato-dextrose agar at 25*'C for 2 weeks. Bar = 10 jim.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + V V

+ +

-

+ + +/w +/w +

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

V

+ + + V

+ + w + + +

-

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

Additional assimilation tests and other growth characteristics:

Starch formation + 2-Keto-D-gluconate + + 5-Keto-D-gluconate Urease + Saccharate Gelatin liquefaction D-Glucuronate + Thiamine-free Growth at 20''C + 50% (w/w) glucoseyeast extract agar Growth at 30''C 10% NaCl/5% glucose Co-Q: 10 (Gueho et al. 1993). Mol% G + C: 56.5 (PC:: Golubev and Vagabova 1977). Cell hydrolyzates: Glucose, mannose, xylose (von Arx and Weijman 1979).

759

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Starch formation + 5 -Keto-D-gluconate + Urease + Saccharate w Gelatin liquefaction D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at 30"C + yeast extract agar Growth at 37°C 10% NaCl/5% glucose Co-Q: Not determined. Mol%G + C: 54.4 (r^,: Nakase and Komagata 1971c). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Medlar fruit {Mespilus sp.), isolated by G. Protii in Italy in 1953 (CBS 1926). Type strain: CBS 1926. Comments: Strains were also isolated from trachea rinsings of a patient by G. A. de Vries in the Netherlands, 1955 (CBS 2289); a strain of unknown origin (CBS Comments: Strains were also isolated from flowers of 4234) contributed by G. Ricci (Rome, Italy); air in the Lewesia pygmaea, a portulaca (1), seawater (4) and leaves Netherlands by A. Kikstra (CBS 6086) and dog's skin in the Netherlands by E.A.R.R Baudet (CBS 922). After of cereals (1). the completion of this manuscript, nucleotide sequence analysis in our laboratory (unpublished) indicates that 94.22. Cryptococcus kuetzingii Fell & Phaff (1967) C kuetzingii is closely related to C. albidus. Origin of the strain studied: Soil in Tihany, Hungary (1). Type strain: CBS 4214, isolated in 1946 by Zsolt from soil in Tihany, Hungary.

Growth in 5% malt extract: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2.7-6.0) x (4.0-10.0) [xm, single, in pairs, short chains, or clusters. After one month, a slight ring and sediment may be present. Growth on 5% malt agar: After one month at 20°C, the streak culture is cream to tan. The surface is smooth, glistening and the texture is so mucoid that the growth runs to the bottom of the slant. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

+ s

-

+

-

+ + w w

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ V

-

w

-

+ +

-

+ + w + + +

-

+

-

94.23. Cryptococcus laurentii (Kufferath) C.E. Skinner (1950) Synonyms: Torula laurentii Kufferath (1920) Torulopsis laurentii (Kufiferath) Lodder (1934) Torula aurea Saito (1922) Chromotorula aurea (Saito) EC. Harrison (1928) Rhodotorula aurea (Saito) Lodder (1934) TorulaflauescensSaito (1922) Torulopsisflavescens(Saito) Lodder (1934) Cryptococcusflauescens(Saito) C.E. Skinner (1947b) Cryptococcus laurentii (Kufferath) C.E. Skinner var.flauescens(Saito) Lodder & Kreger-van Rij (1952) Rhodotorula laurentii (Kufferath) Hasegawa, Banno & Yamauchi (1960) Torulopsis carnescens Verona & Luchetti (1936) Rhodotorula peneaus Phaff, Mrak & Williams (1952) Rhodotorula nitens Mackenzie & Auret (1963)

Growth in 5% malt extract: After 3 days at 25°C, the cells are spheroidal to ovoidal to elongate and are single, in pairs or in short chains of three or four cells. Cell sizes are (2.0-5.5)x(3.0-7.0)|Jim; some strains may have elongate cells which measure 8.5xl3^m. A thin ring, a moderate sediment and sometimes islets are present. After one month a moderate to thick slimy ring and a heavy sediment are present; a pellicle or islets may form. Growth on 5% malt agar: After one month at 20°C, the streak culture is cream-colored, yellowish, pinkish, orange or tan colored. The surface is smooth and glossy, sometimes pasty (not mucoid); in most strains the texture is slimy so that the growth runs to the bottom of the slant. The margin is entire to lobate. Dalmau plate culture on corn meal agar: Pseudomycelium is absent or rudimentary. Fermentation: absent.

Vic. Descriptions of anamorphic basidiomycetous genera and species

760

Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

v v v + + + + + +/w + v + +/w + v

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose

+ + + + -

formation Starch formation Urease Gelatin liquefaction Thiamine-free Growth at BO'^C Growth at 37°C

+ +

Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 51.2-59.0 {T^: Nakase and Komagata 1971c); 58 (BD: Storck et al. 1969); 59.7 (BD: Baptist and Kurtzman 1976). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Palm wine isolated by Kufferath (1920) from "malafou" or palm wine from the Congo; wheat and corn isolated by Kurtzman (1973). Type strain: CBS 139. Comments: Strains were also isolated from other sources: Italian muscatel wine (1), bottle in brewery (1), slime flux of oak (1), tumor (1), bronchial tube of patient (1), leaves of tropical plants (4), insect frass in Acacia karroo (1), sea water (1), air (3), deep frozen beans (1), shrimp (1), soil (3) and beech-forest soil, Denmark (7). Strains of opposite mating types from wheat and corn (CBS 6473, CBS 6474: MT-a and CBS 6475, CBS 6476: MT-a) were isolated and described by Kurtzman (1973). After conjugation, the zygote formed true mycelium with chlamydospore-like structures that lacked clamp connections. The complete life cycle was not determined. C. laurentii, as noted by strain differences in mol% G + C, is genetically heterogenous. This heterogeneity was confirmed by Gueho et al. (1993) who reported differences in nucleotide sequence analysis of the mating strains and the type strain of C. laurentii. 94.24. Cryptococcus luteolus (Saito) C.E. Skinner (1950) Synonyms: Torula luteola Saito (1922)

Chromotorula luteola (Saito) EC. Harrison (1928) Torulopsis luteola (Saito) Lodder (1934) Rhodotorula luteola (Saito) Hasegawa, Banno & Yamauchi (1960)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to elongate, (3.1-6.0)x(5.5-9.0) |im, and are single, in pairs or short chains; a ring begins to form and a light sediment is present. After one month a moderate amount of sediment and a ring are present. A thin film may also form. Growth on 5% malt agar: After one month at 20°C, the streak culture is cream-colored to yellowish or tan to gray-brown. The surface is smooth and glossy, the texture slimy so that the growth runs to the bottom of the slant. The margin is entire. Slide culture on potato agar: Pseudomycelium is absent or chains of cells are formed. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + + + + + + v +/w + w

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+/w

+ + + w

+ + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose

+ + + + -

Starch formation Urease Gelatin liquefaction Thiamine-free Growth at 25°C Growth at SO^C

+

Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 59.5 {T^\ Nakase and Komagata 1971c). Cell hydrolyzates: Xylose, mannose low, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Air in Tokyo by K. Saito (1); foliage of tropical plants (2); coastal waters of the Bahamas by J. Fell (12); acidic sludge in the Netherlands by A.M. Jansen (1). Type strain: CBS 943, from the air in Tokyo in 1922. 94.25. Cryptococcus macerans (Frederiksen) Phaff & Fell (1970) Synonyms: Rhodotorula macerans Frederiksen (1956) Rhodotorula lini Wieringa (1956)

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman Cryptococcus hungaricus (Zsolt) Phaff & Fell var. gallicus Saez (1973b)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal or long-ovoidal, single or in pairs, (3.0^.5)X(5.0-15.0) |im. A thin ring and some sediment are present. After one month a moderate to heavy, slimy reddish ring and a heavy sediment are formed; islets may develop.

761

type (a). Rodrigues de Miranda did not describe a complete life cycle for this species; mating studies in our laboratory were unsuccessful. According to nucleotide sequence analysis (Gueho et al. 1993), this species may be related to Cystofilobasidium; this relationship is also suggested by the presence of Co-Q 8, which is found in Cystofilobasidium.

Growth on 5% malt agar: After one month at 20°C, the streak culture is bright coral-red to pink-peach, surface nearly smooth with some rugose or sectored areas, and glossy with entire margins. The texture is pasty.

94.26. Cryptococcus magnus (Lodder & Kreger-van Rij) Baptist & Kurtzman (1976)

Dalmau plate culture on corn meal agar: Pseudomycelium absent or rudimentary. Fermentation: absent. Assimilation:

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to elongate, (3.5-15.0)x(4.5^5.0)(im, single, in pairs or in short chains of up to six cells. A ring begins to form and a little sediment is present. After one month a moderate ring and a fair amount of sediment are formed. Growth on 5% malt agar: After one month at 19°C, the streak culture is cream-colored to tan. The surface is smooth, highly glossy and the texture slimy, so that the growth runs to the bottom of the slant. The margin is entire. Slide culture on potato agar: Pseudomycelium is absent. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +/w V

+ + + +

+/w V

+ + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + +/w s V

+ + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Urease + 5-Keto-D-gluconate + Gelatin liquefaction + Saccharate Biotin-free D-Glucuronate + Thiamine-free 50% (w/w) glucoseGrowth at 25°C + yeast extract agar Growth at SO^C 10% NaCl/5% glucose Starch formation + Co-Q: 8 (Gueho et al. 1993, Yamada and Kondo 1973). Mol% G + C: 61.2 (PC: Golubev and Vagabova 1977). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Dew-retted flax, Denmark (3); pharynx of deer, Axis axis (2); flowers, Canada (2); spring water in California, USA (1), slime flux of elm (Ulmus carpinifolia) in California, USA. Type strain: CBS 2206, isolated by Frederiksen (1956) from field-retted flax straw in Denmark. This species formed the major proportion of the red yeasts on this substrate, particularly during the winter months. Comments: Mating types were reported by Rodrigues de Miranda (1984d); CBS 2206 and CBS 6532 are of one type (a), CBS 2425 and CBS 2426 of the opposite

Synonym: Cryptococcus laurentii (Kufferath) C.E. Skinner var. magnus Lodder & Kreger-van Rij (1952)

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w v + + + + + + + w w + v + v -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Starch formation + 5-Keto-D-gluconate n Urease + Saccharate + Gelatin liquefaction D-Glucuronate + Growth at WC + 50% (w/w) glucoseGrowth at 37T yeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 49.0 (BD: Storck et al. 1969); 54.1 (BD: Baptist and Kurtzman 1976). Cell hydrolyzates: Xylose, mannose low, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

762

Vic. Descriptions of anamorphic basidiomycetous genera and species

Origin of the strain studied: Atmosphere in the Netherlands. Type strain: CBS 140, isolated by Sobels in 1943 from the atmosphere.

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

s

T^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

Comments: C laurentii var. magnus was described by Lodder and Kreger-van Rij (1952) as distinct from + C. laurentii var. laurentii on the basis of differences + in cell morphology: the cells of var. magnus were + found to be larger than those of var. laurentii, although V Phaff and Fell (1970) could not separate them on this + characteristic nor did we see the elongated cells. Baptist and Kurtzman (1976) raised the taxon to the rank + of species based on differences in G + C content and + s comparative enzyme patterns. C. magnus can be separated + + from C. laurentii based on the inability of C. magnus + to grow on melibiose and ribitol. Based on nucleotide + sequence analysis (Yamada et al. 1990a), C magnus may be related to C ater, an observation that we have Additional assimilation tests and other growth confirmed in our laboratory (unpublished). characteristics: 94.27. Cryptococcus marinus (van Uden & Zobell) Golubev (1981) Synonym: Candida marina van Uden & Zobell (1962)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal to elongate, (2.7-6)x(5.4-12)|im, and may be single, in pairs or in chains. After one month, a dull pellicle and heavy sediment are present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is cream to brownish-yellow, dull, soft, smooth. Dalmau plate culture on corn meal agar: The pseudomycelium may be primitive or consist of long wavy pseudohyphae bearing, globose and ovoidal, often curved cells that are often terminal or sometimes lateral on short pedicels (Fig. 390). Fermentation: absent.

Urease 2-Keto-D-gluconate n 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Thiamine-free D-Glucuronate + Pyridoxine-free 50% (w/w) glucoseGrowth at 25T yeast extract agar Growth at 30°C 10% NaCl/5% glucose + Starch formation Co-Q: 10 (Yamada and Kondo 1972a). Mol% G + C: 64.0 {T^: Stenderup et al. 1972); 61.2 {T^: Nakase and Komagata 1971c). Cell hydrolyzates: Xylose, mannose low, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Seawater over coral and algal growth at the Great Barrier Reef, Torres Strait, Australia during July and August, 1960 (van Uden and Zobell 1962). Type strain: CBS 5235. Comments: Van Uden and Zobell (1962) did not indicate a type culture; van Uden and Buckley (1970) designated the strain listed above. 94.28. Cryptococcus neoformans (Sanfelice) Vuillemin (1901) See Filobasidiella neoformans p. 656 94.29. Cryptococcus podzolicus (Bab'eva & Reshetova) Golubev (1981)

_^

Fig. 390. C. marinus, CBS 5235. Cells grown on corn meal agar at 25''C for 2 weeks. Bar= 5 [im.

Synonym: Candida podzolica Bab'eva & Reshetova (1975)

Growth in 5% malt extract: After 3 days at 25T, the cells are polymorphic, including obpyriform, ovoidal, spheroidal to elongate, measuring (3.4-4.7) x(5.4-8.7) |im. They occur singly, in pairs and may bear lateral or polar elongate appendages. A light sediment is present. After one month a heavy sediment and a ring are present (Fig. 391).

763

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

Type strain: CBS 6819 (Bab'eva and Reshetova strain BKM Y-1982).

Fig. 391. C podzolicus, CBS 6819. Cells grown on glucose-yeast extract water at 25°C for one week. Bar= 10 ^im.

Growth on 5% malt extract agar: After one month at 25°C, the streak colony is white to cream or tan-colored, the surface is very rugoid, and the margin is fringed with true and pseudomycelium. Dalmau plate culture on corn meal agar: True and pseudomycelium are present; buds are produced on short or elongate conidiophores. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s + + + + + + + + + + + + + +

7V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n + + -

Starch formation formation Urease Gelatin liquefaction Thiamine-free Growth at 25°C Growth at 30^C

94.30. Cryptococcus skinneri Phaff & do CarmoSousa (1962) Growth in 5% malt extract: After 3 days at 25^C, the cells are ovoidal to globose, (3.4-6.7) x (4.0-7.4) |im, single or in pairs. A light sediment is present after one month. Growth on 5% malt agar: After one month at 25*'C, the streak culture is white to cream-colored, smooth, glossy, slightly mucoid, raised and the margin is entire. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation:

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose

Comments: Bab'eva and Reshetova (1975) sampled the main soil and climatic zones of the European part of the Soviet Union, the Siberian North and the mountainous regions of the Pamirs, the Tien Shan, the Caucasus, the Crimea and the Altai (Lake Teletskoe region). They reported finding this species in podzolic and sod-podzolic soils in the taiga zone but not in the tundra. They also found it in bog and meadow (flood plain) soils of the same zone and farther south in the gray forest soils, as well as in red earth (Georgia) and brown forest soils in a pine forest in the Lake Teletskoe region. C podzolicus was not found in black earth, nor chestnut soils, nor mountain soils of the Pamirs, the Tien Shan and the Crimea. They found the species in the soils and not on plants, from studies throughout the year. Sampaio and Fonseca (1995) reported several strains of C. laurentii, also isolated from soil, which are physiologically related to C podzolicus. We were unable to confirm the following assimilation test results from the original description: assimilation of sorbitol and salicin, negative, as well as starch production; assimilation of ribitol, positive and slow.

+ +

Co-Q: Not determined. MoI% G + C: 62.8 (Bab'eva and Reshetova 1975). Extracellular polysaccharides: Glucose, galactose, mannose and xylose (Bab'eva and Reshetova 1975).

Origin of the strain studied: From a sod-podzolic soil in a birch forest (Chashnikovo, Solnechnogorsk district, Moscow Province, Russia).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V s + + s s V + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

ws +

764

Vic. Descriptions of anamorphic basidiomycetous genera and species

Additional assimilation tests and other growth characteristics:

is so mucoid that it runs to the bottom of the slant. The margin is entire.

2-Keto-D-gluconate + Urease + 5-Keto-D-gluconate + Gelatin liquefaction Saccharate Thiamine-free D-Glucuronate + Growth at 25''C + 50% (w/w) glucoseGrowth at 3 0 ^ w/yeast extract agar Growth at 2>TC 10% NaCl/5% glucose Starch formation + Co-Q: Not determined. Mol% G + C: 53.0 (BD: Storck et al. 1969). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Dalmau plate culture on corn meal agar: Pseudomycelium absent.

Origin of the strain studied: Insect frass underneath the bark of a young dying specimen of the Pacific coast hemlock (Tsuga heterophylla) located on the bank of the Siletz River in NW Oregon (Phaff and do Carmo-Sousa 1962). Type strain: CBS 5029 (Phaff and do Carmo-Sousa strain UCD FST60-82). Comments: Strains were also isolated from slime fluxes of willow (Salix) and aspen (Populus) spp. in Alaska, Yukon Territory and British Columbia. 94.31. Cryptococcus terreus di Menna (1954b) Synonyms: Cryptococcus himalayensis S. Goto & Sugiyama (1970) Cryptococcus elinouii Golubev & Tauson (1979)

Growth in 5% malt extract: After 3 days at 25°C, the cells are mainly globose or short-ovoidal, single, in pairs or short chains, (3.5-6.5)x(4.0-8.0) |im. A light ring and a small amount of sediment may be present. After one month at 25°C, a moderate ring and a moderate to heavy sediment are formed. At 19°C in 2% glucose-peptoneyeast extract-water, a few cells were seen to bud on short stalks (Fig. 392). Growth on 5% malt agar: After one month at 19°C, the streak culture is brownish cream-colored or yellowish-tan. The surface is smooth, glossy, and the texture is in some strains soft but not mucoid, in other strains the growth

Fig. 392. C. terreus, CBS 1895. Cells with buds on short stalks grown in glucose-yeast extract water for one week at 19''C. Bar= 10|im.

Fermentation: absent. Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v V v + + v + + v w v + + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose

+ + + + -

Starch formation Urease Gelatin liquefaction Growth at BO^'C Growth at 37°C

+ + +

w

Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 59.5, C. terreus strain, CBS 1895 (BD: Storck et al. 1969); 54.7 (7;^: Vancanneyt et al. 1994); 57-58, C. elinouii strains (paper chromatography: Golubev and Tauson 1979); 55.4, 55.7 (paper chromatography: Golubev and Vagabova 1977, Golubev and Tauson 1979); 58.0, C. himalayensis strain {T^: Baharaeen et al. 1982). Cell hydrolyzates: Xylose, mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Soil in New Zealand by di Menna (18); type strain of C himalayensis, CBS 6293, from soil sample from Chawa Gassar, Bhutan, May 1967, by H. Kanai; type strain of C elinouii, CBS 7051, from soil on a high mountain in U.S.S.R. by Golubev. Type strain: CBS 1895, isolated from soil in New Zealand, obtained from di Menna. Comments: Cryptococcus himalayensis was described by Goto and Sugiyama (1970) as a separate species, because of the ability to assimilate sucrose, raffinose, and melezitose and the inability to assimilate maltose. Repeated tests by Rodrigues de Miranda (1984d) proved the opposite and this species fits the standard description for Cryptococcus terreus. A synonymous relationship between C elinouii and C himalayensis is evident when nuclear sequences are compared (Fell et al. 1992). The nuclear sequence alignment results also show a close relationship of C fuscescens to C terreus.

94. Cryptococcus Vuillemin / J.W Fell and A. Statzell-Tallman

Strains were also isolated from desert soil in Chile by di Menna (3); soil in Belgian forest by L. Hennebert; soil in New York by S. Gochenaur, 1974; soil in northern California by Phaff (1); and from gut contents of trout caught in northern California by Spencer and Phaff (2). 94.32. Cryptococcus uniguttulatus (Zach) Phaff & Fell (1970) See Filobasidium uniguttulatum p. 667 94.33. Cryptococcus vishniacii Vishniac & Hempfling (1979) Synonyms: Cryptococcus asgardensis Vishniac & Baharaeen (1982) Cryptococcus baldrensis Vishniac & Baharaeen (1982) Cryptococcus hempflingii Vishniac & Baharaeen (1982) Cryptococcus lupi Baharaeen & Vishniac (1982) Cryptococcus tyrolensis Vishniac & Baharaeen (1982) Cryptococcus vishniacii Vishniac & Hempfling var. asocialis Vishniac & Baharaeen (1982) Cryptococcus vishniacii Vishniac & Hempfling var. vladimirii Vishniac & Baharaeen (1982) Cryptococcus vishniacii Vishniac & Hempfling var. wolfii Vishniac & Baharaeen (1982) Cryptococcus wrightensis Vishniac & Baharaeen (1982) Cryptococcus socialis Vishniac (1985a)

Growth in 5% malt extract: After 3 days at 19°C, the cells are spheroidal, ovoidal to elongate, (3.4-9.4) x (4.026) |im, and may be single, budding, or in chains. Growth on 5% malt extract agar: After one month at 19°C, the colony is cream-colored, smooth, butyrous, semi-glistening with the edges entire. Dalmau plate culture on corn meal agar: After one week at 19°C, pseudomycelium is not present.

765

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate v Starch formation + 5-Keto-D-gluconate n Urease v Saccharate Gelatin liquefaction D-Glucuronate + Growth at 19°C + Growth at 30T 50% (w/w) glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: 9 (Vishniac and Baharaeen 1982). Mol% G + C: 53.48-56.09 (7;^: Baharaeen and Vishniac 1982, Vishniac 1985a). Cell hydrolyzates: Not determined.

Origin of the strains studied: Soils of the Dry Valleys, South Victoria Land, Antarctica, collected in 1973 by W.V Vishniac and Z. Bowen: type strain of C asgardensis, CBS 8141 (MYSW 302Y310); type strain of C baldrensis, CBS 8142 (SW 302Y259); type strain of C hempflingii, CBS 8143 (MYSW 306Y212); type strain of C lupi, CBS 8100 (MYSW 202Y252); type strain of C tyrolensis, CBS 8144 (MYSW 303Y336); type strain of C wrightensis, CBS 8145 (MYSW 303Y206); type strain of C vishniacii var. asocialis, CBS 8146 (MYSW 302Y312); type strain of C vishniacii var. vladimiri, CBS 6810 (MYSW 302Y265); type strain of C vishniacii var. wolfii, CBS 6812 (MYSW 303Y216). Type strain: CBS 7110 (MYSW 304Y268), soil isolate (sandstone, sand) from Mt. Baldr, South Victoria Land, Antarctica. Comments: According to the original description, optimal growth except for the type strain is 10°C, and 20°C for the other strains. We recommend 5°C for short term storage and cryopreservation for long term storage. The basis for the species listed in synonymy with C. vishniacii is similarity in nucleotide sequences (Fell et al. 1992, Gueho et al. 1993) and results of standard taxonomic tests.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V

+ V

s

V

s V V V V

V

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V

V V V

s

V

V V

94.34. Cryptococcus yarrowii A. Fonseca & van Uden (1991) Growth in 5% malt extract: After 3 days at 25°C, the cells are elongate cylindrical to fusiform, (1.1-2.7)x(3.27.4) ^m, and reproduce predominantly by polar budding. They may be single, in pairs or in short chains. A slight sediment is formed. After one month, both a ring and sediment are present. Growth on 5% malt agar: After one month at 25°C, the colony is white to cream-colored, slightly raised, semiglistening, butyrous, and the margin is entire. Dalmau plate culture on corn meal agar: Rudimentary pseudomycelium is present. Fermentation: absent.

766

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Vic. Descriptions of anamorphic basidiomycetous genera and species

+ s s + + + +

-

+ + +

-

s

-

s

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

s + + +

-

+

-

w w +

-

+

Additional assimilation tests and other growth characteristics: +

+ + 2-Keto-D-gluconate Urease 5-Keto-D-gluconate n Gelatin liquefaction Saccharate w Butanediol D-Glucuronate + L-Malic acid Arbutin L-Tartaric acid Xylitol Sodium nitrate + L-Arabinitol Glucono-6-lactone + Cadaverine + D-Galacturonic acid + Creatinine Propanediol + Creatine Imidazole L-Lysine +/w 0.01% Cycloheximide Ethylamine + 0.10% Cycloheximide 50% (w/w) glucoseGrowth at 2 5 ^ + yeast extract agar Growth at 30''C 10% NaCl/5% glucose w Starch formation Co-Q: 10 (Fonseca and van Uden 1991). Mol% G + C: 60.3 {T^:: Fonseca and van Uden 1991). Cell hydrolyzates: Mannose, glucose, mannitol, rhamnose, galactose, xylose, inositol and arabitol.

Origin of the strain studied: From a decaying mushroom collected in a woods, Lisbon, Portugal, 1988. Type strain: CBS 7417 (Fonseca and van Uden strain IGC 4525). Comments: Sequence analysis of a partial region of the LSU rDNA in our laboratory indicates that C. yarrowii is a member of the genus Rhodotorula and that the cell wall analysis should be re-evaluated. Comments on the genus The generic name Cryptococcus was introduced by Kiitzing (1833) for an organism observed from dried scrapings collected from a window sill. Kiitzing's description was "Globuli museosi hyalini non colorati, in stratum determinatum mucosum facile secedens sine oidine aggregati". The organism was placed among the algae and a description of the only species, C. mollis Kiitzing, was not presented. In 1901, Vuillemin introduced the concept that Cryptococcus should be characterized by pathogenic yeasts and he transferred Saccharomyces

neoformans Sanfelice 1895 to Cryptococcus. The history of the genus and the confusion caused by the two definitions of Cryptococcus can be found in Benham (1935), Lodder (1938), Skinner (1950) and Rodrigues de Miranda and Batenburg-van der Vegte (1981). In the meantime, nomenclature of the pathogen Cryptococcus neoformans was widely accepted by the medical community. Stability of that nomenclature was in question as taxonomic separations of Torulopsis, Candida, Cryptococcus and Rhodotorula came under scrutiny and von Arx and Weijman (1979) recommended the transfer of C neoformans to Apiotrichum. In order to conserve the genus and retain stability of the binomial nomenclature of C. neoformans, the genus Cryptococcus Vuillemin was conserved with the type species C. neoformans (Fell et al. 1989, Greuter et al. 1994). The first edition of "The Yeasts" (Lodder and Kregervan Rij 1952) defined Cryptococcus as: cells surrounded by a capsule, formation of starch-like compounds, absence of pseudomycelium, inability to ferment and the lack of carotenoid pigments. Five species were accepted in the genus. The only change in the generic description through the 3rd edition of "The Yeasts" was the capacity of Cryptococcus species to assimilate inositol. Cryptococcus grew to 19 species. The major informative step, by this time, was the relationship of some species to the teleomorphic genera Filobasidium and Filobasidiella. The greatest pressure on Cryptococcus taxonomy was the retention of the ascomycetous species in Candida and the separation of basidiomycetous Candida species based on the composition of cell hydrolyzates (Weijman and Rodrigues de Miranda 1983). Species with xylose were incorporated into Cryptococcus and those species that lacked xylose were relegated to Rhodotorula. As a result, Cryptococcus expanded to 34 species. The genus, as currently defined, is polyphyletic with tenuous boundaries based on a combination of abilities to utilize inositol and D-glucuronate and to synthesize starch (Table 74). This polyphyletic nature will have to be examined by a combination of molecular and classical systematics, particularly in consort with other members of the Filobasidiaceae and Tremellaceae. The goal should be a classification based on phylogenetic relationships and not the separation into several genera based on one or more artificial taxonomic characters. The latter type of taxonomy merely adds names and confiasion to the literature and consequently hinders the ability to undertake the practical application of taxonomy viz., species identifications. Separation of the 34 species assigned to Cryptococcus requires 2 morphological observations and 21 physiological tests, generally more time and effort than one wishes to devote to a routine identification. Therefore, we split all the species represented in Tables 74 and 75 into four groups (Tables 76-79) based on starch synthesis and assimilation of inositol, D-glucuronate and nitrate. Using these compounds as an initial screen, followed by testing the compounds in the appropriate Tables 76-79, it

94. Cryptococcus Vuillemin / J.W. Fell and A. Statzell-Tallman

is possible to reduce the number of tests required for a routine identification. An alternative to classical taxonomy is the use of molecular identifications from nucleotide sequence analyses. Through use of species-specific oligonucleotide sequences as a primer in a polymerase chain reaction, a species can be rapidly identified. A primer for C. neoformans has been described (Fell 1995, Haynes et al.

767

1995) and primers for all species should be available in the near fixture. A study of the molecular systematics of the genus is currently underway in our laboratory; some of the results are included under the comments of the individual species, which indicate relationships between certain species. We anticipate that, with the completion of this study, some changes within the genus will have to be made.

768

Vic. Descriptions of anamorphic basidiomycetous genera and species

95. Fellomyces Y. Yamada & Banno I. Banno and Y. Yamada Diagnosis of the genus Cells are spherical to ellipsoidal and produce one or more stalks, each giving rise to a single conidium. The conidium is freed without forceful ejection at the distal end of the stalk (Table 80). The stalks get longer than 4.0 \km. True mycelia may or may not be produced. Ballistoconidia are not formed. Glucose is not fermented. Nitrate is not assimilated. Diazonium blue B color reaction is positive. Xylose is present in the cells. The coenzyme Q-10 system is present. D-Glucuronate and mjo-inositol are assimilated. Table 80 Salient characteristics differentiating the anamorphic stalked conidium-forming yeast genera Fellomyces, Kurtzmanomyces, Sterigmatomyces and Tsuchiyaea Genus

Reproduction

CoQ system

Fellomyces

Conidium separated at distal end of long stalk

Q-10

+

Kurtzmanomyces

Conidium separated at distal end of long stalk, branching and elongating to form additional conidia

Q-10

-

Sterigmatomyces

Conidium disjointed in mid-region of short stalk

Q-9

-

Tsuchiyaea

Enteroblastic bud and conidium disjointed in mid-region of stalk

Q-9

+

Xylose in cells

Type species Fellomyces polyborus (D.B. Scott & van der Walt) Y Yamada & Banno Species accepted 1. Fellomyces fuzhouensis (Yue) Y Yamada & Banno (1988) 2. Fellomyces horouitziae Spaaij, Weber & Oberwinkler (1991) 3. Fellomyces penicillatus (Rodrigues de Miranda) Y. Yamada & Banno (1984) 4. Fellomyces polyborus (D.B. Scott & van der Walt) Y Yamada & Banno (1984) Key to species See Table 81. 1. 2(1). 3(1).

a b a b a b

Soluble starch and a-methyl-D-glucoside assimilated -^ 2 Soluble starch and a-methyl-D-glucoside not assimilated -^ 3 True mycelium present True mycelium absent True mycelium present True mycelium absent

F penicillatus: F polyborus: F fuzhouensis: F horouitziae:

Table 81 Key characters of species in the genus Fellomyces Species

Assimilation Soluble starch

True mycelium

Mol%G + C

55.2, 54.0

a-Methyl-D-glucoside

Fellomyces fuzhouensis

-

-

+

F horouitziae

-

-

-

54.2

F penicillatus

+

w

+

48.9

F polyborus

+

s

-

49.6

p. 770 p. 771 p. 769 p. 769

95. Fellomyces Y. Yamada & Banno /1. Banno and Y. Yamada

769

Systematic discussion of the species 95.1. Fellomyces fuzhouensis (Yue) Y. Yamada & Banno (Yamada et al. 1988a) Synonyms: Sterigmatomyces fuzhouensis Yue (1982) Sterigmatomyces tursiopsis Kurtzman, Smiley, Johnson & Hoffman (Fell et al. 1984a) nom. nud.

Growth in malt extract: After 3 days at 2530°C, the cells are spheroidal, (2.4-6) [xm, ovoidal, (2.375.5)X(2.8-6.2) |im, or sometimes irregularly shaped. Conidia are produced on stalks measuring 4-15 |im (Fig. 393). The number of stalks is 1-8 or more. The stalks may be sympodially formed. The conidia may produce additional stalks, and conidia may form in branched chains of cells. The conidia are separated at the distal end of the stalks from parent cells. The conidium is pear-shaped or bottleshaped. True mycelium may be produced. A ring, powdery pellicle and sediment are present. Growth on malt agar: After 3 days at 25°C, the streak culture is cream-colored, pasty, with a dry, dull and wrinkled surface. The margin is crenulate. True mycelium and filamentous elongation of the cells occur. A variant frequently occurs, producing a smooth, glistening colony with an entire margin. The conidia may be produced on short stalks that give the appearance of budding cells. Dalmau plate culture on corn meal agar: True mycelium (<2[im wide) is branched with lateral and terminal stalks, rarely septate. Terminal conidia may develop from numerous stalks, resembling a penicillate head. Single or clustered blastoconidia may be produced on the hyphae. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + V

+ + + + V

w/-

-

+ + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + + + + +

-

+ +

-

+ + +

-

Fig. 393. F fuzhouensis, IFO 10374. After 48 hours at 25°C in malt extract. Bar= 10 |im.

Additional assimilation tests and other growth characteristics: 10% NaCl/5% glucose w 2-Keto-D-gluconate + Starch formation v 5-Keto-D-gluconate + Urease w/+ Ethylamine Growth at 3TC Arbutin + 50% Glucose Co-Q: 10 (Yamada and Banno 1984a). Mol% G + C: 54.0 (HPLC), type strain IFO 10374; 55.2 (T^), CBS 6133. Xylose in cells: Present.

Origin of the species: IFO 10374 (CBS 8243; NRRL Y-12916; 1519C) flower of mango, J.-Z. Yue, China; IFO 10205 (CBS 6133; NRRL Y-7956), type strain of Sterigmatomyces tursiopsis nom. nud., bottlenosed dolphin {Tursiops truncatus), D.G. Ahearn, USA. Type strain: CBS 8243 (IFO 10374). 95.2. Fellomyces horovitziae Spaaij, Weber & Oberwinkler (1991) Growth in 5% malt extract: After 5 days at 25°C, the cells are globose to ovoidal, (3.0-8.0)x(2.0-6.0)(im, reproduce by enteroblastic budding or by forming conidia on stalks. A sediment, ring, pellicle and islets are formed. After 4 weeks at 25''C, a sediment, ring and a creeping pellicle are present. Growth on 5% malt extract agar: After 5 days at 25°C, the cells are globose, ellipsoidal to ovoidal, occasionally asymmetric, (2.5 x 6.0) x (2.0-6.0) |im. They occur singly or in pairs connected by stalks. They reproduce by enteroblastic budding or by forming conidia on stalks. The conidium detaches by disjunction at a septum in the distal region of the stalks. The mature conidia are clavate with a truncate base. They measure (2.0^.0) X(1.5-2.5) ^m. Parent cells are as a rule lipidrich, forming 1-8 stalks. The size of the stalks is variable. The streak culture is mucoid, creamish-white with an entire margin. The culture surface is glistening with dull areas, caused by the formation of conidia on stalks. Dalmau plate culture on corn meal agar: Neither hyphae nor pseudohyphae are formed.

770

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Vic. Descriptions of anamorphic basidiomycetous genera and species

95.3. Fellomyces penicillatus (Rodrigues de Miranda) Y. Yamada & Banno (1984a) A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + s s -

Additional assimilation tests and other growth characteristics: 50% (w/w) Glucose2-Keto-D-gluconate yeast extract agar 5-Keto-D-gluconate 10% NaCl/5% glucose Saccharate n Starch formation D-Glucuronate + Urease Xylitol s Nitrite L-Arabinitol Gelatin liquefaction Arbutin + Glucono-6-lactone Cadaverine 0.1% Cycloheximide Creatine Growth at 2 5 ^ Creatinine Growth at 2>TC Ethylamine hydrochloride s L-Lysine s Co-Q: 10 (Spaaij et al. 1991). Mol% G + C: 54.2 {T^: Spaaij et al. 1991). Xylose in cells: Present (Spaaij et al. 1991).

Origin of the strain studied: Fruit-body of Xenasmatella sp. collected in May 1981, at Hagelloch (Hornkopf) near Tubingen, Germany. Type strain: CBS 7515 (Spaaij's strain FS-H-0043).

Synonym: Sterigmatomyces penicillatus Rodrigues de Miranda (1975)

Growth in malt extract: After 3 days at 24°C, the cells, (l-6)x(2-ll)|im, have a variety of shapes that may be spheroidal, ovoidal, obpyriform and apiculate and propagate by formation of blastic cells (conidia) at the top of stalks (Fig. 394). When attached to short hyphal strands, the cells are ventricose. The conidiogenous stalks (1-6 per cell) range in size from 0.5 x (0.7-9) |Jim. After 30 days the majority of the cells are (l-7)x(2-8)|im with as many as 17 stalks per cell. The stalks range in size from 0.5 x (0.7-35) ^m. Conidium separation is at the distal position where an adjacent septum is formed. Growth on malt agar: After 3 days at 24''C, the cell sizes are similar to those in malt extract and the stalks (1-15 or more per cell) are simple or branched, with a length of 40 ^m or greater. The streak culture is dull, white to pale luteus, pasty, soft, and rugose with an irregularly crenulate border. Variation of colonies is frequently found which are smooth, glistening, soft, mucoid, raised, pale luteus to cream-colored with a border that is entire. The cells in these colonies are spheroidal to ovoidal, (23)x(3^)jim. Stalks are few in the smooth colony type, thus the cells have the appearance of typical budding yeast cells. Dalmau plate culture on corn meal agar: Rugose colonies develop branched true mycelium (<2 |im wide); cross walls are rare, stalks are lateral, short to elongated, with terminal conidia. The latter may develop numerous stalks with conidia to give the appearance of a penicillate head. Hyphae may also develop in the smooth colonies, however, the majority of the cells are similar to those on malt agar.

Comments: This species was not part of the original Fermentation: absent. manuscript as received from Banno and Yamada; consequently the description was included in this chapter by the editors. The description presented above was extracted from Spaaij et al. (1991). Data suppHed by CBS differed as follows: soluble starch, +; L-arabinose, +; L-rhamnose, +; ribitol, s; a-methyl-D-glucoside, s; inositol, s; arbutin D, -; growth at 25T, -. CBS reported a second strain, CBS 7727, from rotting wood, Uppsala Stadsskogen, Sweden, that was isolated in May 1985 by O. Constantinescu. Spaaij et al. (1991) distinguished Fe/Zomj^c^^ horovitziae from E fuzhouensis, E penicillatus and E polyborus by physiological differences in the utilization of L-rhamnose, erythritol, ribitol, mannitol, galactitol, w>^6>-inositol and D-gluconate. An additional diagnostic character is the formation of true hyphae by E penicillatus and E fuzhouensis in contrast to an absence of hyphae or pseudohyphae in Fig. 394. E penicillatus, IFO E horovitziae. extract. Bar= 10 |im.

10119. After 72 hours at 25°C in malt

11 \

95. Fellomyces Y. Yamada & Banno /1. Banno and Y. Yamada

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

15 stalks per cell. Newly formed cells generally separate at the distal end of stalks. Islets, a light ring and sediment are present.

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Growth on malt agar: After 3 days at 24°C, the streak culture is restricted, dull, creamy-white, powdery, and rugose with irregularly crenulate margins. The cells are similar to those in malt extract. Variants are present that form colonies which are glistening, raised, smooth and pale luteus. The margin is entire. The encapsulated cells bear few short (<0.5 [im in length) stalks. The cells appear similar to budding cells of the genus Cryptococcus. Dalman plate culture on corn meal agar: Nonseptate, hypha-like elongation of the cells occurs. Neither pseudomycelium nor true mycelium is present.

Additional assimilation tests and other growth characteristics: 10% NaCl/5% glucose 2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate + Urease Arbutin w Growth at 37T Ethylamine 50% Glucose Co-Q: 10 (Yamada and Banno 1984a). MoI% G + C: 48.9 (7^), type strain (CBS 5492). Xylose in cells: Present.

n w + +

Origin of the strains studied: IFO 10119 (CBS 5492), contaminant on agar plate, G. Kraepelin, Germany; CBS 7046, birch tree, LP. Bab'eva, U.S.S.R.; CBS 7152, woodland soil, J.R van der Walt, South Africa. Type strain: CBS 5492 (IFO 10119). Comments: Sterigmatomyces penicillatus was considered to be a later, facultative synonym of S. polyborus by Jong and King (1977a), since the type strains of the two species were morphologically and physiologically similar. In contrast, Kurtzman (in Fell et al. 1984a) and Kurtzman (1990a) confirmed by DNA reassociation that S. penicillatus and S. polyborus are distinct. Yamada et al. (1986a,b) reported that the two species are separable at the specific level by electrophoretic patterns of seven enzymes. In this monograph, therefore, the authors regard E penicillatus as a separate species on the basis of the low homology of DNA reassociation and of the different electrophoretic enzyme patterns from E polyborus. The latter is distinguished morphologically from the former by absence of true mycelium.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ s + + + + + s +/w + ws + + + -

W'^^f-sSAii;

95.4. Fellomyces polyborus (D.B. Scott & van der Walt) Y. Yamada & Banno (1984a) Synonym: Sterigmatomyces polyborus D.B. Scott & van der Walt (1970b)

Growth in malt extract: After 3 days at 24°C, the cells are spheroidal to ovoidal, (1.3-4.0)x(2.5-5.5)|im. The cells may be single or reproduce by the formation of single conidia on stalks that range in size from 0.5 x (0.7-10) |im (Fig. 395). After one month there may be as many as

Fig. 395. Epolyborus, IFO 10203. After 48 hours at 25°C in malt extract. Bar=10|im.

772

Vic. Descriptions of anamorphic basidiomycetous genera and species

Additional assimilation tests and other growth characteristics:

and Dick (1957). Here, the term "stalk" is used for the projection. Nakase et al. (1989b) applied the term "non2-Keto-D-gluconate + 10% NaCl/5% glucose + ballistosporous conidium" to a conidium produced on the 5-Keto-D-gluconate + Starch formation stalk. However, "non-ballistosporous conidium" does not Arbutin s Urease + specify this type of conidium as all blastoconidia are Ethylamine Growth at SS'^C implied by this term. In this monograph, consequently 50% Glucose Co-Q: 10 (Yamada and Banno 1984a). the term "stalked conidium" is used for the conidium Mol% G + C: 49.6 {T^\ type strain (CBS 6072). produced on a stalk and disjointed at the mid-region or at Xylose in cells: Present. the distal position of the stalk according to van der Walt Origin of the strains studied: IFO 10120 (CBS 6072), et al. (1987d) and Nakase et al. (1991b). tunnels of Xyleborus torquatus in Cussonia umbellifera The stalked conidium-forming yeast genera Fellomyces, tree, J.R van der Walt, South Africa; IFO 10203 (CBS Kurtzmanomyces, Sterigmatomyces and Tsuchiyaea are 6643), ambergris, J. Nicot. phylogenetically separate from each other at the generic Type strain: CBS 6072 (IFO 10120). level on the basis of the comparison of the partial sequences of 18S and 26S (or 25S) ribosomal RNAs Comments on the genus (Yamada et al. 1989b, Gueho et al. 1990). The genus Yeasts of the genus propagate mainly by conidiogenesis. Sterigmatosporidium appears not to be a perfect state A conidiogenous cell develops slender projections, on of the genus Fellomyces, although the two genera share which a conidium is vegetatively produced. The conidia the following characteristics: the formation of conidia are never forcibly discharged. Fell (1966) and Fell et al. which are freed by an end-break in the stalks, coenzyme (1984a) called the projection bearing the conidium, Q-10 and presence of xylose in the cells (Kraepelin and "sterigma". The term "sterigma" should be strictly used Schulze 1982, Fell et al. 1984a, Yamada et al. 1986a, for the ballistospore-bearing projection according to Snell 1988a).

96. Hyalodendron Diddens / G.S. de Hoog and M.Th. Smith

773

96. Hyalodendron Diddens G.S. de Hoog and M.Th. Smith Diagnosis of the genus Colonies are dry, farinose to velvety, and white to cream-colored. Budding cells and pseudomycelium are absent or rare. Hyphae are hyaline, coherent or locally disarticulating. Conidia arise in short chains and are ellipsoidal to cylindroidal with truncate ends. Sugars are not fermented. Nitrate is not assimilated. myo-Inositol is assimilated. Urease reaction is positive. Diazonium blue B reaction is positive. Dolipores are present. Coenzyme Q-9 system is present. Xylose is present in cell walls. Type species Hyalodendron lignicola Diddens Species accepted 1. Hyalodendron lignicola Diddens (1934) Systematic discussion of the species

Additional assimilation tests and other growth characteristics:

96.1. Hyalodendron lignicola Diddens (1934) Synonyms: Hyalodendron lignicola Diddens var. undulatum Diddens (1934) Hyalodendron lignicola Diddens var. simplex Diddens (1934)

Growth on potato carrot agar: After 10 days at 2022°C, colonies are dry, flat, farinose, white, and vaguely zonate. True hyphae are thin-walled, often flexuose, 1.52.5 |im wide, and profiisely branched at acute angles. Conidia arise in lateral or terminal, mostly unbranched chains comprising up to 10 conidia; conidia are ellipsoidal with truncate ends or cylindroidal with slightly swollen median parts and measure (1.5-3.0)x(5-15)|Jim (Fig. 396). Pale olivaceous, firm-walled inflated cells up to 30 (im in diameter are occasionally present in old cultures.

Urease + Growth at ?>TC Co-Q: 9, CBS 220.34 (Gueho et al. 1993). Mor/o G + C: Not determined.

Origin of the strains studied: CBS 219.34, 220.34, paratype strains o^ Hyalodendron lignicola, from

Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + + + + + + +

V

+ + V

+ + n

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n + + +

-

+ + +/w + n V

+ + w/n

-

w

Fig. 396. H. lignicola, various strains. Hyphae with chains of blastoconidia, liberated conidia and budding cells.

774

Vic. Descriptions of anamorphic basidiomycetous genera and species

woodpulp, Sweden, Melin; CBS 221.34, type strain of hyphae and mostly lacks budding cells. However, Martinez Hyalodendron lignicola van simplex, woodpulp, Sweden, (1979) demonstrated a basidiomycetous nature on the Melin; CBS 222.34, type strain of Hyalodendron lignicola basis of cell wall ultrastructure. The dolipore structure var. undulatum, from wood pulp, Sweden, Melin; from is identical to that known in the genus Trichosporon beer pipes at brewery (1). (Gueho et al. 1992b). From partial 26S rRNA sequences, Type strain: CBS 219.34. the species was found among other Trichosporon species (Gueho et al. 1993). Also, the lack of fermentation and assimilation of many carbon compounds, indicates a close Comments on the genus affinity to Trichosporon. The cell walls contain xylose The species sporulates well on nutritionally poor media. (Weijman 1979a) which further indicates a tremellaceous The rather coherent chains of conidia with truncate ends relationship. No teleomorph is known. De Hoog (1979a) described are characteristic. The single species in this genus has long been regarded the occurrence of large, chlamydospore-like cells, of as a hyphomycete since it forms dry colonies with true which the karyology has not yet been elucidated.

97. Itersonilia Derx / T. Boekhout

775

97. Itersonilia Derx T. Boekhout Diagnosis of the genus Mycelium is hyaline, septate, and dikaryotic, or more rarely monokaryotic. Clamp connections are present in dikaryophase, but incomplete clamps occur in hyphal monokaryophase. Septa have dolipores without parenthesomes. Inflated cells ("sporogenous cells") are globose, subglobose, pyriform or ovoidal, and single or in clusters, terminal or intercalary, and thin to somewhat thick-walled. Ballistoconidia are bilaterally symmetrical, lunate or, more rarely, subpyriform, and formed either by germination of inflated cells or as secondary ballistoconidia. Germinating ballistoconidia give rise to appressoria. Chlamydospores are sometimes present. Monokaryophase is mostly yeastlike. Sugars are not fermented. Diazonium blue B and urease reactions are positive. Xylose is present in whole-cell hydrolyzates. The major ubiquinone is Q-9. Type species Itersonilia perplexans Derx Species accepted \. Itersonilia perplexans Derx (1948) Systematic discussion of the species

7 days at 17°C, pseudohyphae may be present (Fig. 398B). Yeast phases sometimes revert to monokaryotic hyphae, 97.1. Itersonilia perplexans Derx (1948) which form incomplete clamp connections, inflated cells, Synonyms: ballistoconidia and chlamydospores. Aerobic growth is Itersonilia pyriformans Nyland (1949) Itersonilia pastinacae Channon (1963) cream to pale yellowish-brown, dull or shiny, butyrous Description of the hyphal phase on yeast-peptone- or rather dry, flat or slightly raised, smooth, transversely glucose agar: After 5 days at 20°C, colonies are flat ridged or reticulate, with the margin entire, straight or somewhat raised, dull, cream, arachnoid to velutinous, or crenulate. The colonies of reverted monokaryotic with aerial fascicles, and with the margin entire or hyphal strains are whitish to cream, velutinous to hirsute, eroded. Hyphae are regularly branched, with cells of (50- and morphologically indistinguishable from those of the 120) X (2.0-7.0) |im. Inflated cells ("sporogenous cells") dikaryotic phase. are intercalary or terminal on hyphae or hyphal branchlets, single or in clusters (10.0-18.0)x(8.0-15.0) |im, and Formation of ballistoconidia: Ballistoconidia are germinating with hyphae or sterigmata (Fig. 397A). formed abundantly by both the di- and monokaryotic Ballistoconidia are bilaterally symmetrical, lunate to hyphal phases, are bilaterally symmetrical, lunate, ovoidal subpyriform (10.0-22.0) x (6.0-14.0) |im, and germinate or subpyriform, and measure (10.0-22.0)x(6.0-13.5) ^m. with secondary ballistoconidia or appressoria. Appressoria are stalked or not, ellipsoid, circular or elongate in outline, and usually with dichotomously lobed margin (Fig. 397B). Chlamydospores are sometimes present and are subglobose (13.0-20.0)x(10.0-14.0) |im. Growth of yeast phase on 5% malt extract agar: After 7 days at 17°C, the cells are ellipsoidal, allantoid, cylindrical or fusiform (9.0^0)x(3.0-11.0) |im, and single (Fig. 398A). Budding is usually polar, sometimes lateral, sessile or on short denticles, and with sympodial or percurrent proliferation. Occasionally, cells grow with short hyphae or revert to monokaryotic hyphae with incomplete clamp connections and may have inflated cells and chlamydospores. Colonies are butyrous or rather dry, smooth, transversely ridged or reticulate, shiny or dull, pale yellowish-brown, and with the margin entire, straight or crenulate. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on corn meal agar:

After

Fig. 397. /. perplexans, CBS 363.85. (A) Dikaryotic hyphae with inflated cells. (B) Appressoria. Bar=5 ^im.

776

Vic. Descriptions of anamorphic basidiomycetous genera and species

Great Britain, and CBS 363.85Y, yeast phase isolated from CBS 363.85; PD 85/1013Y, yeast phase isolated from PD 85/1013, curly kale {Brassica oleracea), W. Loerakker, Netherlands. Complementary mating types: Four A and two B factors have been identified and were arbitrarily assigned as follows: AiBi (CBS 363.85Y, CBS 144.68Y, PD 85/1013Y), A1B2 (CBS 197.53Y and PD 87/693Y), A2B2 (isolate "Boekhouf'Y), A3B2 (PD 85/1007Y) and A4B2 (CBS 286.50Y) (Boekhout 1991b). Type strain: CBS 363.85 (neotype, designated by Boekhout et al. 1991b).

Fig. 398. /. perplexans, CBS 363.85. (A), (B) Yeast cells on MEA and morphology agar, respectively. (C) Ballistospores of the dikaryophase (MEA). Bar = 5|im.

Bilaterally symmetrical ballistoconidia are occasionally formed by yeast cells (Fig. 398). Fermentation: absent. Assimilation (at Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

ITC): + +

-

+ V

+ + V V

+ + V

+ + V V V V

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

n

-

V V

V

-

+ V

V V

-

+ V V

n V

growth

2-Keto-D-gluconate + Nitrite v 50% (w/w) Glucose Growth at 2 5 ^ + Starch formation Growth at 30°C Urease + Co-Q: 9, CBS 144.68, 286.50, 197.53, 356.64 (Yamada and Konda 1984). Mol% G + C: 60.1-63.9, eleven strains {T^\ Boekhout et al. 1991b).

Origin of the strains studied: CBS 197.53Y, yeast phase isolated from CBS 197.53, parsnip (Pastinaca satiua), G. Sowell, U.S.A; CBS 144.68Y, yeast phase isolated from CBS 144.68, air, A. Kikstra, Netherlands; CBS 363.85, wood of beech {Fagus syluatica), C.T. Ingold,

Comments on the genus Itersonilia perplexans is characterized by the presence of hyphae with clamp connections, inflated cells ("sporogenous cells"), and ballistoconidia. No teliospores occur. The species inhabits the phyllosphere, and dikaryotic strains of Iters onilia are reported to be pathogenic to parsnip (Pastinaca sativa) and chrysanthemums (Chrysanthemum sp.) (Channon 1956, 1963, Gandy 1966, Boekhout 1991b, Boekhout et al. 1991b). Isolates from parsnip were described as /. pastinacae (Channon 1963). However, "interspecific" matings, rather high DNA similarities and an intergrading morphology were observed (Boekhout 1991b, Boekhout et al. 1991b). In mating experiments yeast strains were mixed thoroughly on Flegel's conjugation medium (Flegel 1976), which was slightly modified as suggested by van der Walt (see Boekhout 1991b). Two or three streaks of the mixed strains were made on the agar surface. All mating experiments were performed at \TC. Yeast phases may be formed under different environmental conditions, e.g., high humidity or submerged growth. Yeast cells of /. perplexans have never been isolated from nature. Nitrate-assimilating and non-assimilating yeast strains were observed (Boekhout 1991b). Itersonilia seems to have a tetrapolar mating system, and the life cycle comprises dikaryotic hyphal phases, and monokaryotic yeast- and hyphal phases. No karyogamy has been observed (Olive 1952, Boekhout 1991b). Tremellales affinity is supported by the presence of dolipores without parenthesomes (Kreger-van Rij and Veenhuis 1971a, Boekhout 1991b), the presence of xylose in whole-cell hydrolyzates (Boekhout 1987, Weijman and Golubev 1987), 5S rRNA nucleotide sequences (Gottschalk and Blanz 1985), and sensitivity to killer toxins of Cryptococcus laurentii (Golubev 1990a, Golubev and Kuznetsova 1989).

98. Kockovaella Nakase, Banno & Y. Yamada / T. Nakase and I. Banno

111

98. Kockovaella Nakase, Banno & Y. Yamada T. Nakase and I. Banno Diagnosis of the genus Vegetative cells are spherical, short ovoidal, ovoidal or kidney-shaped, and reproduce by stalked conidia and ballistoconidia or, rarely, by budding cells. Ballistoconidia are globose, napiform, kidney-shaped or ellipsoidal. Fermentation is absent. Diazonium blue B color test is positive. The major ubiquinone is Q-10. Xylose is present in the cells. The teleomorph is unknown. Type species Kockovaella thailandica Nakase, Banno & Y. Yamada Species accepted 1. Kockovaella imperatae Nakase, Banno & Y Yamada (1991) 2. Kockovaella thailandica Nakase, Banno & Y Yamada (1991) Key to species See Table 82. 1.

a Ballistoconidia kidney-shaped or ellipsoidal; galactitol assimilated b Ballistoconidia globose or napiform; galactitol not assimilated

K. thailandica: p. 778 K. imperatae: p. 777

Table 82 Key characters of species in the genus Kockovaella Species

Kockovaella imperatae K. thailandica

Assimilation of galactitol

Growth at 31 ^'C

+ +

Systematic discussion of the species 98.1. Kockovaella imperatae Nakase, Banno & Y. Yamada (Nakase et al. 1991b) Growth in YM broth: After 3 days at 25T, the cells are spherical to ovoidal, (1.5-5.9)x(4.0-10.0) |im. They propagate by conidiation on a sterigma-like stalk, and by budding. The conidia are produced holoblastically on a stalk which develops multilaterally and holoblastically from the parent cell. Occasionally chains or clusters of conidia are formed. Stalks measure 0.3-0.6 |im in width and 4-10 |im in length. Newly formed cells generally separate at the distal position of the stalk. A sediment is formed. After one month at 17°C, a fragile, incomplete pellicle and a sediment are present. There may be as many as 5 stalks on a cell. Growth on YM agar: After one month at IT'^C, the streak culture is grayish-yellow to grayish-orange, delicately wrinkled, dull, soft to butyrous and an entire margin. Stalked conidia and ballistoconidia are produced. Dalmau plate culture on corn meal agar: Mycelium and pseudomycelium are not formed. Production of ballistoconidia: Ballistoconidia are produced on corn meal agar and YM agar. They are

Mol%G + C T

HPLC

52.3 49.5

49.0 47.7^8.4

Ballistoconidia

globose, napiform kidney shaped, ellipsoidal

globose or napiform, (1.4-4.6)x(2.1-7.4)|im, and produced on sterigmata, which are generally 4.0-5.2 (Jim in length, but occasionally become much longer than 30 [im. Sterigma may be branched with a terminal ballistoconidium (Fig. 399). Fermentation: absent. ^

Fig. 399. K. imperatae, CBS 7554. (A) Vegetative reproduction by conidiation on stalks produced by parent cells after 3 days at 24°C on YM agar. (B) Ballistoconidia ejected from a colony on corn meal agar after 5 days at 22°C. Some ballistoconidia produce secondary ballistoconidia. Bars=10|im.

Vic. Descriptions of anamorphic basidiomycetous genera and species

778

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + w/+ + + +/1 + + +/1 +

+ +/1 + +/1 +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ w/+/1 + +/w +/w +/1 +/w w/w -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate +/w Urease 5-Keto-D-gluconate w Gelatin liquefaction D-Glucuronate + Acid production D-Galacturonate + Thiamine-free Starch formation Growth at 30°C Co-Q: 10 (Nakase et al. 1991b). Mol% G + C: 52.3 {T^); 49.0 (HPLC). Xylose in cells: Present.

+ w -

Dalmau plate culture on corn meal agar: Mycelium and pseudomycelium are not formed. Production of ballistoconidia: Ballistoconidia are produced on corn meal agar and YM agar. They are kidneyshaped or ellipsoidal, (1.3-5.3) x (2.1-9.2) (im, and formed on sterigma, which proliferate singly or in branches. The sterigmata occasionally become much longer than 30 |im (Fig. 400). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +/1 + + + + + + + + + + + +/1 + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/w/-

-l\ w/-

w w/-

-l\

Origin of the strain studied: CBS 7554 (JCM 7826), a dead leaf of blady-grass (Impemta cylindrica), Nakase Additional assimilation tests and other growth characteristics: and Fungsin, Thailand. 2-Keto-D-gluconate + Urease + Type strain: CBS 7554 (JCM 7826). 5-Keto-D-gluconate + Gelatin liquefaction w + Acid production Comments: K. imperatae resembles K. thailandica D-Glucuronate + Thiamine-free in biochemical and physiological characteristics but can D-Galacturonate Growth at 33T be separated by ballistoconidia morphology, which is Starch formation Co-Q: 10 (Nakase et al. 1991b). symmetrical in the former and asymmetrical in the latter. Mol% G + C: 49.5 {T^); 47.7^8.4 (HPLC). DNA-DNA reassociation experiments clearly indicate the Xylose in cells: Present. presence of two species (Nakase et al. 1991b). Origin of the strains studied: CBS 7552 (JCM 7824, IFO 10520), dead leaf of blady-grass (Imperata 98.2. Kockovaella thailandica Nakase, Banno & cylindrica), Nakase and Fungsin, Thailand; CBS 7553 Y. Yamada (Nakase et al. 1991b) Growth in YM broth: After 3 days at 25°C, the vegetative cells are spherical to ovoidal, (1.6-4.6) x (2.07.7) |im, single, in pairs, or in clusters, and reproduce by conidiation or rarely by budding. Conidia are produced holoblastically on a sterigma-like stalk. Stalks develop multilaterally and holoblastically from a conidiogenous cell, rarely proliferate sympodially, and measure 415 |im in length and 0.3-0.6 \im in width. Newly formed cells generally separate at the distal position of stalks. Occasionally chains and clusters of stalked conidia are formed. A sediment is formed. After one month at 17°C, a fragile pellicle and a sediment are present. There may be as many as 12 stalks on a cells. Growth on YM agar: After one month at 17°C, the streak culture is grayish-orange, smooth, shining, soft to mucoid, and has an entire margin. Stalked conidia and ballistoconidia are formed.

Fig. 400. K. thailandica, CBS 7552. (A) Vegetative reproduction by conidiation on stalks produced by parent cells after 3 days at 24°C on YM agar. (B) Ballistoconidia ejected from a colony on corn meal agar after 5 days at 22*'C. Some ballistoconidia produce secondary ballistoconidia. Bars=10|im.

98. Kockovaella Nakase, Banno & Y. Yamada / T. Nakase and I. Banno

(JCM 7825, IFO 10521), dead leaf of rice plant {Oryza satiua), Nakase and Fungsin, Thailand. Type strain: CBS 7552 (JCM 7824).

779

and budding cells (blastoconidia); by the presence of xylose in the whole-cell hydrolyzate, and by ubiquinone Q-10. Partial sequences of 18S ribosomal RNA suggest a close phylogenetic relationship to Fellomyces species Comments on the genus which produce neither ballistoconidia nor budding cells. Nakase et al. (1991b) proposed the genus Kockovaella The conidial characteristics of Kockovaella raise the quesbased on three strains isolated from leaves of plants in tion of the taxonomic significance of mode of conidiogenThailand. This genus is characterized by the formation esis as a criterion for description of genera or higher taxa, of three kinds of conidia: stalked conidia, ballistoconidia. and this issue was discussed by Nakase et al. (1991a).

780

Vic. Descriptions of anamorphic basidiomycetous genera and species

99. Kurtzmanomyces Y. Yamada, M. Itoh, Kawasaki, Banno & Nakase Y. Yamada and I. Banno Diagnosis of the genus Cells are globose, ovoidal to cylindrical. A single conidium is formed at the top of stalks and freed without forceful ejection at the distal end of the stalks. Occasionally stalks branch or elongate and additional conidia are formed. True mycelium is produced. Ballistoconidia are absent. Glucose is not fermented. Nitrate is assimilated. D-Glucuronate and mj^o-inositol are not assimilated. Diazonium blue B color reaction is positive. Xylose is absent from the cells. Coenzyme Q-10 is present. Type species Kurtzmanomyces nectairei (Rodrigues de Miranda) Y. Yamada, M. Itoh, Kawasaki, Banno & Nakase Species accepted 1. Kurtzmanomyces nectairei (Rodrigues de Miranda) Y. Yamada, M. Itoh, Kawasaki, Banno & Nakase (1988) 2. Kurtzmanomyces tardus Gimenez-Jurado & van Uden (1990) Key to species 1.

a Trehalose assimilated b Trehalose not assimilated

Systematic discussion of the species 99.1. Kurtzmanomyces nectairei (Rodrigues de Miranda) Y. Yamada, M. Itoh, Kawasaki, Banno & Nakase (1988a) Synonyms: Sterigmatomyces nectairei Rodrigues de Miranda (1975) Fellomyces nectairei (Rodrigues de Miranda) Y. Yamada & Banno (1984a)

Growth in malt extract: After 3 days at 25°C, the cells are spheroidal to ovoidal, (2-7) x (4-8) jim, with 110 short stalks. Conidia develop laterally or terminally on stalks and branching of the stalks occurs (Fig. 401). Conidia separate at the distal end. After one month, stalks are branched and irregularly shaped (0.7-l)x(l-17)(im. A sediment is present. Growth on malt extract agar: The cells are similar in

K. nectairei: p. 780 K. tardus: p. 781

size to those in malt extract; colonies are creamy, become salmon-colored by 5 days and orange-colored by one month. The texture is smooth, and the edges are entire. Dalmau plate culture on corn meal agar: Within one month, short, sparse strands of true mycelium are present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w + + w + + -

Additional assimilation tests and other growth characteristics:

Fig. 401. ^. nectairei, CBS 6405. After 72 hours at 2 5 ^ in malt extract. (A) Light microscopy. (B) Scanning electron microscopy. Bars = 1 |im.

Urease 2-Keto-D-gluconate + 50% Glucose 5-Keto-D-gluconate + 0.01% Cycloheximide Starch formation Growth at BO'^C Ethylamine + Arbutin Co-Q: 10, CBS 6405 (Yamada et al. 1988a). Mol% G + C: 52.5, CBS 6405 (BD: Kurtzman 1990a), Xylose in cells: Absent.

99. Kurtzmanomyces Y. Yamada, M. Itoh, Kawasaki, Banno & Nakase / Y Yamada and I. Banno

Origin of the strain studied: CBS 6405 (IFO 10118), cheese, E.G. Dale, France. Type strain: CBS 6405. 99.2. Kurtzmanomyces tardus Gimenez-Jurado & van Uden (Gimenez-Jurado et al. 1990) The species description is from Gimenez-Jurado et al. (1990). Growth in glucose (2%)-yeast extract (0.5%)peptone (1%) broth: After 3 days at 25°C, the cells are variable both in shape and size, spheroidal, ovoidal, ogival and obovate, measuring (3.0-5.0)x(4.0-8.0)[im. Reproduction occurs by the enteroblastic formation of 1-4 0.52.0 |im-long sterigmata per cell. Some of these sterigmata will eventually elongate to hypha-like outgrowths. Conidia separate distally from the parent cell. Mature conidia are ovate to clavate and may give rise to secondary cells. Quite often sterigmata branch to produce two distinct newly divided cells. Mycelial growth is produced sparingly in liquid medium, however, single cells with short and long hyphae are common. Growth is rather slow and after 1 week only a small sediment is formed. Growth on glucose (2%)-yeast extract (0.5%)peptone (1%) agar: After 1 week at 25°C, the streak culture is pale-orange to salmon-colored, smooth, soft, glossy, butyrous and the edges are entire. After 8 days or more, colonies are slightly raised, convex and sometimes have an elevated center. True mycelium develops abundantly without clamp connections. Dalmau plate cultures on corn meal agar: Abundant formation of true mycelium consisting of slender, septate, branching hyphae without blastoconidia. Pseudomycelium is absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

-

+ +

-

n +

-

781

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate 10% NaCl/5% glucose

Starch formation Gelatin liquefaction 0.01% Cycloheximide Growth at ZTC

Co-Q: 10 (Gimenez-Jurado et al. 1990). Mol% G + C: 58.2, CBS 7421 {T^\ Gimenez-Jurado et al. 1990).

Origin of the strain studied: The only known strain (CBS 7421, IGC 4529) was isolated from contaminated demineralized water in a laboratory, Oeiras, Portugal. Type strain: CBS 7421. Comments: This species grows slowly on common laboratory media. Gimenez-Jurado et al. (1990) showed only 2.3% nDNA relatedness between the two species of Kurtzmanomyces. Comments on the genus Yamada and Banno (1984b) emended the genus Sterigmatomyces and described the new genus Fellomyces. They reserved Sterigmatomyces for anamorphic yeasts characterized by coenzyme Q-9 and by conidia borne on sterigmata which disjoint at septa formed in the midregion of the sterigmata, and Fellomyces for anamorphic yeasts with coenzyme Q-10 and conidia which disjoint at distal septa in the sterigmata. Yamada et al. (1988b), based on the presence or absence of xylose in whole cell hydrolyzates, separated the newly created genus Kurtzmanomyces (xylose negative) with the single species K. nectairei from the genus Fellomyces (xylose positive). The validity of this generic rearrangement was confirmed by Yamada et al. (1989b) and Gueho et al. (1990) based on rRNA sequence analyses. A second species of Kurtzmanomyces was described by Gimenez-Jurado et al. (1990). Large subunit rRNA sequence analysis (J.W. Fell, personal communication) suggests the species to be congeneric. However, small subunit rRNA sequence analysis indicates that the two species are divergent (Yamada et al. 199Id).

782

Vic. Descriptions of anamorphic basidiomycetous genera and species

100. Malassezia Baillon D.G. Ahearn and R.B. Simmons Diagnosis of the genus Asexual reproduction is typically by monopolar (phialidic) enteroblastic budding on a broad base. The extruded bud is separated from the parent cell by a septum followed by fission. Elongate hyphal-like cells are rare in culture but true hyphae with clusters of blastospores may be commonly observed in skin scales from hosts (Fig. 402A). The formation and separation of the bud generally leaves a pronounced scar or collar from which later buds emerge (Fig. 402Bi). Multipolar budding has been observed in one species (Fig. 402B2). The cell wall is multilamellar in nature, and the inner layer of the cell wall as observed with electron microscopy is corrugated with the grooves spiraling from the bud site (Fig. 402C). Chitin is concentrated in the portion of the cell wall forming the collar at the budding site. Growth may require fatty acid (olive oil) supplementation. Growth occurs in enriched nutrient agars in the presence of 400 ppm cycloheximide. Sugars are not fermented. The urease and diazonium blue B reactions are positive. Coenzyme Q-9 is formed. Xylose is absent in whole-cell hydrolyzates. Comments on physiological characterization of species of the genus: Because of their requirements for fatty acids (olive oil) and the fact that the fatty acid components of olive oil serve as sole sources of carbon for growth, standard sugar assimilation and fermentation tests are not applied. Type species Malassezia furfur (Robin) Baillon Species accepted \. Malassezia furfur (Robin) Baillon (1889) 2. Malassezia pachydermatis (Weidman) Dodge (1935) 3. Malassezia sympodialis Simmons & Gueho (1990) Key to species 1. 2(1).

a Lipophilic species, but show growth on enriched organic agars (e.g., Sabouraud's and glucose agars) without addition of oil M. pachydermatis: p. 782 b Obligatory lipophilic species; addition of long-chain fatty acids to culture media is required -^ 2 a Cells occasionally show sympodial budding; insignificant growth with the addition of Tween 80 or oleic acid M. sympodialis: p. 783 b Cells budding exclusively percurrently; growth with the addition of Tween 80 M. furfur: p. 782

Systematic discussion of the species ^t\i\^ »>r I • ^ ^ /T» I.. X Ti -11 r^ooiw 100.1. Ma/a55^zifl/wi/Mr (Robin) Baillon (1889) Synonyms: J J ^ f v 7 Mcro5poro«/wr/wr Robin (1853) Sporotrichum furfur (Robin) Saccardo (1886) Pityrosporum furfur (Robin) Emmons, Binford & Utz (1970)

oleic acid for growth on malt or Sabouraud's agars. Some strains grow slowly with oleic acid. Optimum temperature ^ ^, . ^,.n^ ^ i ^^n^ ^^^ growth IS near 34^C. Growth occurs at 37°C. Mol% G + C: 66.0-66.7, four isolates (neotype CBS 1878, 66.7%) {T^\ Gueho and Meyer 1989).

Saccharomyces ouaiis^zzoztxo {im) Malassezia ovalis (BizzozQXo) kcion 8L Vdimdi {\921)

o.^

, ,o-

\r^ . u • i r^x. A

/1^1^^

Pityrosporum ovale (Bizzozero) Castellani & Chalmers (1913) Saccharomyces sphaericus Bizzozero (1884) [non Saccharomyces

sphaericus von Nageii (1879)]

Pityrosporum malassezii Sabouraud (1904) Cryptococcus malassezii (Sabouraud) Benedek (1930)

Wityrosporum orbiculare Gordon (1951) Growth on glucose-peptone-yeast extract agar with olive oil: After 3 days at 34T, the cells are usually slightly OVOidal to ellipsoidal, ( 1 . 5 ^ . 5 ) X (2.0-6.5) [Xm. ^ ,, . 1 1 - 1 1 /^ ^

Cells of some strams are mostly orbiculate and (2.54.5) |im in diameter; a few large cells (8-10 mm) may be observed (Figs. 402A, Bi, B2, C). The streak culture is cream to yellowish, usually smooth, sometimes lightly wrinkled. The margin is typically entire, occasionally lobate. There is an essential requirement for olive oil or

,

Origin of Strains studied: Human skin scales (6); i_ij//i\i

/A\ ^

^

^-

/i\

humau blood (4); human ear (4); human lung tissue (1); . numan urme (Ij.

Type Strain: CBS 7019.

100.2. Malassezia pachydermatis (Weidman) Dodge (1935) Synonyms:

Pityrosporum pachydermatis ^ji^^n Pityrosporum canis Gustaison (1955)

{\925)

Growth on glucose-peptone-yeast extract agar: After 3 days at 34T, the cells are mostly ellipsoidal, (2.5-5.5)x(3.0-7.0) ^m. The streak culture is cream to yellow, glistening to dull, smooth to rough, with an entire or lobate margin. Olive oil is not essential for growth but is

100. Malassezia Baillon /D.G. Ahearn and R.B. Simmons

783

Fig. 402. (A) Clusters of budding yeast cells and hyphal elements of M. furfur in human skin. Bar=100^m. (Bj) Photomicrograph of M furfur from glucose-peptone-yeast extract agar. Arrow indicates the collarette characteristic of the genus. (B2) Photomicrograph of M. sympodialis showing sympodial budding. Bar = 50|im. (C) TEM of M. furfur showing multilayered cell wall with corrugated inner surface. Bar=0.1 ^im. Inset: oblique section through cell showing spiral nature of the corrugations. (D) TEM of M sympodialis showing characteristic cell wall and sympodial budding with continuity of cytoplasm between parent cell and buds. Bar= 1 [im.

Stimulative for some strains. Glucose is assimilated slowly in yeast nitrogen base medium. Mol% G + C: 55.1-56.1, five isolates; neotype (CBS 1879) 56.1 {Tra'. Gueho and Meyer 1989). Origin of strains studied: Human sputum (1); human blood (5); human skin (7); human ear (1); human vagina (1); ear of dog (1). Type strain: CBS 1879. Comments: Some strains of this species do not grow, or only grow slowly, in yeast nitrogen base medium without the presence of olive oil. Slooff (1970c) reported that growth occurs with mannitol, glucitol, and occasionally with glycerol, lactic acid, and citric acid when tested with auxanogram plates. The species is most often associated with animals, particularly the ears of canines (Abou-Gabal et al. 1979, Guillot et al. 1995), but is also associated with humans (Simmons and Ahearn 1987). 100.3. Malassezia sympodialis Simmons & Gueho (1990) Growtli on glucose-peptone-yeast extract agar witli oil: After 3 days at 34°C, the cells are usually orbiculate and measure (2.5-7.5) x (2.0-8.0) |Jim. Asexual reproduction is mainly by monopolar budding, but sympodially budding cells may be observed (Fig. 402D).

The streak culture is cream to yellowish, usually smooth and glistening. The margin is typically entire. Olive oil is essential for growth on enriched media, but no growth occurs when oleic acid is used as the fatty acid supplementation. Optimal growth occurs near 34°C. Growth occurs at 37°C. Mol% G + C: 62.2zb0.2, 13 isolates (Guillot and Gueho 1995). Origin of strains examined: Human skin (1); human ear (1). Type strain: CBS 7222 is designated as the neotype. From human ear and tinea capitis. Comments on the genus The general characteristics of M sympodialis are similar to those described for Pityrosporum orbiculare Gordon (1951). In the original description of/? orbiculare, Gordon (1951) noted that an essential requirement for fatty acids could not be satisfied by supplementation with oleic acid and that some cells reproduced by multipolar budding. Slooff (1970c) accepted the species in the genus noting its short viability in culture and a more stringent fatty acid requirement than observed for P. ovale. She examined only recently isolated material and indicated that multipolar budding did not occur, but that in some circumstances "budding or extrusion of a germ tube has been observed

784

Vic. Descriptions ofanamorphic basidiomycetous genera and species

from the free poles or from another locus on the cell wall." More recent reports of i? orbiculare appear to have relied only on globose cell shape for their identification of the species. Salkin and Gordon (1977) examined fresh isolates of Pityrosporum species with changing cell shape and fatty acid requirements and suggested, in agreement with others, that P. ovale and P orbiculare were synonymous with Malassezia furfur This synonymy was maintained by Yarrow and Aheam (1984). The original type material and past isolates designated P orbiculare (on the basis of inability to grow on oleic acid, as well as cell shape) are dead. Other isolates designated as P. orbiculare on the basis of globose cell shape have been found to represent M. furfur (Gueho and Meyer 1989); therefore, P orbiculare is continued as a synonym for M furfur. The differences in mol% G + C between M furfur (66%) and M. sympodialis (62%) and their low

DNA relatedness clearly support their separate species status. Polymerase chain reaction (PCR) fingerprinting studies have fiirther confirmed the separation of Malassezia into the three described species accepted here (van Belkum et al. 1994). Guillot and Gueho (1995) used ribosomal RNA sequence analysis and nuclear DNA comparisons to study diversity within the genus. The separate nature of M sympodialis and M. pachydermatis was substantiated and phylogenetic groupings based on large subunit rRNA diversity indicated strains described as M. furfur to represent several species. More recently, Gueho et al. (1996) described four new species of Malassezia on the basis of molecular divergence and have provided morphological and physiological comparisons that allow laboratory separation of the species using non-molecular criteria (Guillot et al. 1996).

785

101. Moniliella Stolk & Dakin / G.S. de Hoog and M.Th. Smith

101. Moniliella Stolk & Dakin G.S. de Hoog and M.Th. Smith Diagnosis of the genus Colonies are smooth or velvety, grayish to olivaceous-black. Budding cells are ellipsoidal, and formed terminally on true hyphae which disarticulate at a later stage. Pseudomycelium and chlamydospores may be present. Cell walls are multilamellar. Septal dolipores are present. Sugars are fermented. Nitrate is assimilated. Diazonium blue B reaction is positive. Urease is produced. Coenzyme Q-9 is produced. Xylose and fiicose are absent from cell walls. Type species Moniliella

acetoabutens

Stolk & Dakin

Species accepted 1. Moniliella acetoabutens Stolk & Dakin (1966) 2. Moniliella mellis (Fabian & Quinet) V Rao & de Hoog (1975) 3. Moniliella pollinis (Hennebgrt & Verachtert) de Hoog & Gueho (1984) 4. Moniliella suaveolens (Lindner) von Arx (1972) Key to species See Table 83. 1. 2(1). 3(2).

a b a b a b

Dark brown, thick-walled chlamydospores are present Chlamydospores are absent -^ 2 Growth at ^TC Growth absent at 37°C ^ 3 Sucrose assimilated Sucrose not assimilated

M acetoabutens: p. 785 M pollinis'.

p. 787

M. suaveolens: M. mellis:

p. 787 p. 786

Table 83 Key characters of species in the genus Moniliella Sucrose fermentation

Species

Moniliella acetoabutens M. mellis M. pollinis M. suaveolens

Assimilation Galactose

Sucrose

-

+

+

+

+

+

+

-

-

-

-

+ +

+

-

-

+ +

V

Stolk & D a k i n

Fermentation: Maltose Lactose Raffinose

+ -

-

Glucose

+

A/^-Acetyl-D-glucosamine

L-Sorbose Sucrose Maltose

+ +

Ethanol Glycerol Erythritol

Galactose

Growth on 4 % malt extract/0.5% yeast extract agar: After 10 days at 2 0 - 2 2 T , colonies are 1 5 19 m m in diameter, evenly felty, vaguely zonate, whitish, brownish-gray at the center, with dirty yellowish to blackish-brown reverse. Hyphae present, 3 . 5 ^ . 5 fxm wide, with intercalary, dark brown, thick-walled chlamydospores and with terminal chains of blastoconidia which finally disarticulate into rectangular arthroconidia (Fig. 403). Blastoconidia are (3.5-6.0)X(4.5-9.0) |im, subhyaline. + +

V

Assimilation:

(1966)

Glucose Galactose Sucrose

Chlamydospores

3rc

+ + +

acetoabutens

Vitamin-free medium

-

Systematic discussion of the species 101.1. Moniliella

Growth Lactose

-

Methanol

n n + +

ceTiobiose Trehalose Lactose

+ +

Ribitol Galactitol D-Mannitol

Melibiose Raffinose Melezitose

-

D-Glucitol a-Methyl-D-glucoside Salicin

+ -

L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

v n

Citrate Inositol Hexadecane Nitrate Vitamin-free

v n + +

jj^^^jj^ Soluble starch o-Xylose

_ -

o-Gluconate OL-Lactate Succinate

+

V

786

Vic. Descriptions of anamorphic basidiomycetous genera and species

Fig. 404. M mellis, CBS 350.33. Pseudomycelium with blasto- and arthroconidia. MEYA, 22°C, 5 days.

Fig. 403. M acetoabutens, CBS 169.66. Chains of blasto- and arthroconidia. Various media, IT'C, 10 days. CBS 594.68, liberated conidia. ChA, 2 2 T , 30 days. CBS 593.68, chlamydospores. ChA, 2 2 ^ , 30 days.

Additional assimilation tests and other growth characteristics: Growth at 37°C + Co-Q: 9, CBS 169.66. Mol% G + C: 61.1-61.3, CBS 169.66, CBS 593.68 {T^: de Hoog and Gueho 1984).

Origin of the strains studied: CBS 169.66 (ATCC 18455), from sweet fruit sauce, Dakin, U.K.; from fruit sauce (1); from sweet pickle (1); from acetic acid containing product (2); from synthetic vinegar (1). Type strain: CBS 169.66. Comments: The species occurs nearly exclusively in substrates with low pH. It is easily distinguished from other Moniliella species by the consistent presence of intercalary chlamydospores in true hyphae, and hyaline or subhyaline conidia. In addition, M acetoabutens does not ferment D-galactose but is able to grow at 37°C. 101.2. Moniliella mellis (Fabian «& Quinet) V. Rao & de Hoog (1975) Synonym: Torula mellis Fabian & Quinet (1928)

disarticulating into arthroconidia, and in a later stage locally forming short chains of blastoconidia. Conidia are subhyaline, ellipsoidal to cylindrical, variable in size, mostly about (4-6)x(l0-25) |im (Fig. 404). Denticles are absent. Fermentation: Glucose Galactose Sucrose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

Maltose Lactose Raffinose

+

+ +

TV^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n n w

-

-

+ +

-

+

-

n

-

-

+ +

-

n

-

w w

-

n +

-

Additional assimilation tests and other growth characteristics: Urease

+

Growth at 3 7 ^

Co-Q: 9, CBS 350.33. Growth on 4% malt extract/0.5% yeast extract Mol% G + C: 58.7, CBS 350.33 {T^: de Hoog and Gueho 1984). agar: After 10 days at 20-22°C, colonies are 10 mm in diOrigin of the strain studied: CBS 350.33, from ameter, cream-colored, gradually darkening to olivaceoushoney. gray, dry, mat, finely velvety, cerebriform, and with a Type strain: CBS 350.33. soft texture. Margins are sharp, slightly lobed. Odor is faintly fruity. Hyphae are 2.5-3.5 |im wide, subhyaline. Comments: The species was preUminarily Hsted as a

101. Moniliella Stolk & Dakin / G.S. de Hoog and M.Th. Smith

787

synonym of M suaveolens by de Hoog (1979a), which was confirmed by de Hoog and Gueho (1984) on the basis of a similar mol% G + C of DNA. However, its source of isolation is quite peculiar. Additional differences are found in absence of utilization of sucrose (fermentative and assimilative) and absence of growth without vitamins. Moniliella suaveolens is a lipophilic species, whereas M. mellis is osmophilic. Trichosporonoides nigrescens Hocking & Pitt may be a synonym; see under the description of that species, p. 875. 101.3. Moniliella pollinis (Hennebert & Verachtert) de Hoog & Gueho (1984) Synonym: Moniliella tomentosa (van Beyma) Stolk & Dakin var. pollinis Hennebert & Verachtert (Dooms et al. 1971)

Fig. 405. M pollinis, CBS 461.67. Pseudomycelium with blasto- and arthroconidia. PCA, 22°C, 10 days.

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 3 mm in diameter, dry, grayish-white, and farinose with strong transverse fissures. The margin is sharp and lobed. Odor is insignificant. Hyphae are about 3 \xm wide, hyaline or subhyaline, and disarticulate into arthroconidia; hyphae terminally change into pseudomycelium and produce apical chains of blastoconidia. Conidia are hyaline or subhyaline, ellipsoidal, (3.5-5.0)x(9-15)fxm, continuous or with a median septum; short-cylindrical denticles often remain on supporting cells (Fig. 405). Fermentation: Glucose Galactose Sucrose

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w +

Maltose Lactose Raffinose

+

V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ + +

V V

-

+

-

n

+

-

n n n + +

-

+ n

-

n

-

+ n

-

n + +

Additional assimilation tests and other growth characteristics: Urease + Growth at 3TC + Co-Q: 9, CBS 461.67. Mol% G + C: 50.4, CBS 461.67 (7^,: de Hoog and Gueho 1984).

Origin of the strain studied: CBS 461.67 (MUCL 11525), from pollen in honey comb, Hajny, U.S.A. Type strain: CBS 461.67. Comments: M. pollinis was recognized as a separate species by de Hoog and Gueho (1984) on the basis of a mol% G + C of DNA which was considerably lower than that of M suaveolens. Presence of growth at 3TC is usable as a key feature. It was the only strain isolated from fresh pollen. The type strain is now degenerative in that the arthroconidial form of propagation is prevalent. 101.4. Moniliella suaveolens (Lindner ex Lindner) von Arx (1972) Synonyms: Sachsia suaveolens Lindner (1895) Oospora suaveolens (Lindner) Saccardo & D. Saccardo (1906) Candida suaveolens (Lindner) Langeron & Guerra (1938) Geotrichum suaveolens (Lindner) Ciferri (Diddens & Lodder 1942) Cladosporium suaveolens (Lindner) Delitsch (1943) Sachsiella suaveolens (Lindner) Ciferri (1955a) Monilia nigra Burri & Staub (1909) Torula nigra (Burri & Staub) Saccardo & Trotter (1911) Moniliella suaveolens (Lindner) von Arx var. nigra (Burri & Staub) de Hoog (1979a) Torula dematia Berkhout (1923) Monilia cerebriforme van Beyma (1933) Monilia macrospora van Beyma (1933) Monilia microspora van Beyma (1933) Monilia tomentosa van Beyma (1933) Moniliella tomentosa (van Beyma) Stolk & Dakin (1966)

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 4-12 mm in diameter, quite variable, grayish-white, olivaceous-green to olive-black with a light marginal zone and velvety or cerebriform, with butyrous texture. The margin is mostly sharp and lobed. Odor is faintly vinaceous or cheese-like. Hyphae are 1.5-3.5 |im wide, hyaline to pale olivaceous and they disarticulate into arthroconidia; hyphae terminally change into pseudomycelium and produce apical chains of blastoconidia. Conidia are subhyaline to olivaceous-brown, ellipsoidal, (3-6) x (6-19) ^m, and finally thick-walled; short-cylindrical denticles often remain on supporting cells (Fig. 406).

Vic. Descriptions of anamorphic basidiomycetous genera and species

788

Additional assimilation tests and other growth characteristics: Urease + Growth at 2>TQ Co-Q: 9, CBS 126.42. Mol% G + C: 58.1-61.7, 5 strains {T, : de Hoog and Gueho 1984).

Origin of the strains studied: CBS 126.42, from mash syringe, Lindner, Germany; CBS 220.32, type strain of Monilia cerebriforme, from tobacco; CBS 221.32, type strain oiMonilia macrospora, from tobacco; CBS 223.32, type strain of Monilia microspora, from tobacco; CBS 224.32, type strain of Monilia tomentosa, from tobacco; from milk (1); from margarine and butter (19); from tobacco (1); from cheese (4); from spoiled muffin (1); from human sputum (1). Type strain: CBS 126.42.

^„^Fo

10|Lim

Fig. 406. M. suaveolens. Various strains on PC A, IT'C. Branched chains of blasto- and arthroconidia, 5 days; Hberated conidia in various stages of pigmentation, 1 month.

Fermentation: Glucose Galactose Sucrose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+ + V

-

+ + +

-

V

V V

V V V

-

+

-

n

Maltose Lactose Raffinose

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n + +

V

-

V

-

+ V

V

n

-

+ V

-

n + +

Comments: The species is extremely variable in its morphology (de Hoog 1979a) as well as in its physiology (Martinez et al. 1979). Key features are the olivaceous pigments in nearly all cultures, the relatively large conidia often borne on protruding scars, fermentation of D-glucose, sucrose, maltose and mostly D-galactose, absence of growth with L-sorbose, trehalose and inositol and at 37''C. In addition, the fruity fragrance is remarkable. Colonies may become hyphal due to long-term maintenance on artificial media. Such cultures mostly show more expanding growth, are velvety rather than butyrous and show less pigmentation. For practical reasons, de Hoog (1979a) maintained a separate variety for such variants, which, however, is taxonomically insignificant. The few strains from pollen and honey, listed by de Hoog (1979a) under M suaveolens, are treated here as separate taxa. Nearly all strains were isolated from fatty substrates such as cheese, butter, margarine, and bakery products; some came from tobacco. Isolates sometimes proved to be resistant to food preservatives, such as sorbinic acid. Two reports have been published of strains that were pathogenic in mammals. The human case (KockovaKratochvilova et al. 1987) concerned a mixed superficial infection. McKenzie et al. (1984) reported two cases from cats, but the described strains are atypical for M suaveolens. It may be supposed that the low maximum growth temperature of M suaveolens prevents serious infections. The species is of basidiomycetous affinity, as demonstrated by lamellar cell walls and dolipore septa (Martinez 1979). Teleomorphs are unknown. Large numbers of mating experiments were unsuccessfiil (de Hoog, unpublished). On acidic media, some strains show very large, erect, clavate hyphae, terminally provided with variously shaped conidium-like inflations. The karyology of these structures has not yet been determined.

102. Phaffia M. W. Miller, Yoneyama & Soneda / M.W. Miller and H.J. Phaff

789

102. Phaffia M.W. Miller, Yoneyama & Soneda M.W. Miller and H.J. Phaff Diagnosis of the genus Vegetative cells reproduce by enteroblastic budding, are ellipsoidal and occur singly, in pairs, and occasionally in short chains. Carotenoid pigments are synthesized (mainly astaxanthin and a minor proportion of P-carotene) which give cells en masse a red to salmon-red color. True mycelium is absent, but a rudimentary pseudomycelium may be present. Chlamydospores are formed. A pellicle is formed on liquid media. Fermentative ability is present. Starchlike compounds are formed (synthesis is pH independent). Inositol is not assimilated as sole carbon source. Nitrate is not assimilated. Coenzyme Q-10 is present. Diazonium blue B and urease reactions are positive. Xylose is present in whole-cell hydrolyzates. Type species Phaffia rhodozyma M.W. Miller, Yoneyama & Soneda Species accepted 1. Phaffia rhodozyma M.W. Miller, Yoneyama & Soneda (1976) Systematic discussion of the species The description of Phaffia rhodozyma is given under its tQlQomorph Xanthophyllomyces dendrorhous: p. 718. Comments on the genus Phaffia rhodozyma was tentatively described under the name Rhodozyma montanae by Phaff et al. (1972). This binomial is a nomen nudum, because a Latin description was not provided. Miller et al. (1976b) renamed the yeast Phaffia rhodozyma, provided a Latin description and gave a more detailed listing of its physiological and morphological properties. They also compared it with Rhodomyces dendrorhous, a yeast superficially described by Ludwig (1891, 1896). Apparently, Ludwig never isolated this organism in pure culture, and as a consequence, it is not possible to determine whether P. rhodozyma and R. dendrorhous represent the same species. Because the type strain of P. rhodozyma is conspecific with Xanthophyllomyces dendrorhous (Golubev 1995), P rhodozyma is regarded as the anamorph of X. dendrorhous. Phaffia appears to have a restricted geographic distribution. Nine strains were isolated in mountainous locations

in a wide area of Japanese islands and a single strain came from Alaska, U.S.A., all from exudates of broadleafed trees (Miller et al. 1976b). Golubev et al. (1977a) isolated 67 additional strains in Russia from birch fluxes and bark during a seven year survey. One additional strain was obtained from Turpeinen, who isolated it from birch sap in Finland. Although numerous surveys have been published on tree associated yeasts in many parts of the world (reviewed by Phaff and Starmer 1987) no other isolations of Phaffia rhodozyma have been reported. Because of its high astaxanthin content, Phaffia rhodozyma has been used as a dietary pigment source to impart the desirable orange-red color to the normally white flesh of pen-reared salmonids and crustaceans (Johnson et al. 1977). Because the pigment of untreated cells is only poorly absorbed by fish, an enzymatic procedure for improving the extractability of astaxanthin was developed by Johnson et al. (1979). To increase astaxanthin yields. An et al. (1989) were able, by mutagenesis, to derive highly pigmented mutant strains of Phaffia rhodozyma with greatly increased astaxanthin content.

790

Vic. Descriptions of anamorphic basidiomycetous genera and species

103. Pseudozyma Bandoni emend. Boekhout and a comparison with the yeast state of Ustilago maydis (De Candolle) Corda T. Boekhout and J.W. Fell Diagnosis of the genus Yeast cells are variable in shape, ovoidal, ellipsoidal or cylindrical; hyphae occur, usually with retraction septa and with the cytoplasm in cells separated by lysed cells; fusiform blastoconidia occur on sterigma-like denticles and may form an aerial mycelium made up of branched, acropetal chains of conidia; chlamydospores may be present, but ballistoconidia are absent. Colonies are whitish, pinkish, orange, or brownish-yellow, usually dimorphic with the central part yeastlike, and the margin fringed with hyphae. A thin aerial mycelium is usually present, which toward the margin may become zonate. Clamp connections are absent. Sugars are not fermented. Diazonium blue B and urease reactions are positive. myo-\nosiio\ and D-glucuronate are assimilated, and extracellular starch-like compounds are not produced. Xylose is absent from whole-cell hydrolyzates. The major ubiquinone is Q-10. Species accepted 1. Pseudozyma antarctica (S. Goto, Sugiyama & lizuka) Boekhout (1995) 2. Pseudozyma aphidis (Henninger & Windisch) Boekhout (1995) 3. Pseudozymaflocculosa(Traquair, Shaw & Jarvis) Boekhout & Traquair (1995) 4. Pseudozyma fusiformata (Buhagiar) Boekhout (1995) 5. Pseudozyma prolifica Bandoni (1985) 6. Pseudozyma rugulosa (Traquair, Shaw & Jarvis) Boekhout & Traquair (1995) 1. Pseudozyma tsukubaensis (Onishi) Boekhout (1995) 8. Ustilago maydis (De Candolle) Corda (1842) Key to species See Table 84. 1. 2(1). 3(2). 4(3). 5(4). 6(2).

a Galactose assimilated -^ 2 b Galactose not assimilated a b a b a b a b a b

P. fusiformata: p. 793 Ustilago maydis: p. 796

Lactose assimilated —^ 3 Lactose not assimilated -^ 6 Melebiose assimilated Melebiose not assimilated -^ 4 Ribitol assimilated -^ 5 Ribitol not assimilated Salicin assimilated Salicin not assimilated L-Rhamnose assimilated L-Rhamnose not assimilated

p. 792

P. aphidis: P. tsukubaensis: P. antarctica: P. prolifica: P. rugulosa: P. flocculosa:

p. 795 p. 791 p. 794 p. 794 p. 792

Table 84 Key characters of species in the genus Pseudozyma Species

Assimilation Galactose

Lactose

Melibiose

L-Rhamnose

Salicin

Pseudozyma antarctica

+

+

_

V

+

P. aphidis

+

+

+

+

+

P. flocculosa

+

V

-

+

-

-

+

P. fusiformata P. proliflca

+

+

-

+

-

P. rugulosa

+

-

+

+

+

P. tsukubaensis

+

+

-

-

Ustilago maydis

-

+

-

+

+

V

103. Pseudozyma Bandoni emend. Boekhout / T. Boekhout and J.W. Fell

Systematic discussion of the species 103.1. Pseudozyma antarctica (S. Goto, Sugiyama & lizuka) Boekhout (1995) Synonyms: Sporobolomyces antarcticus S. Goto, Sugiyama & lizuka (1969) Candida antarctica nom. nud., as C. antarctica (S. Goto, Sugiyama & lizuka) Kurtzman, Smiley, Johnson & Hoffman (Meyer et al. 1984) Vanrija antarctica (S. Goto, Sugiyama & lizuki) R.T. Moore (1987a) Trichosporon oryzae Ito, lizuka & Sato (1974)

Growth on 5% malt extract agar: After 5 days at 17°C, cells are cylindrical to fusiform, variable in size, (5-35)x(1.5-3.0)[xm, with 1-3 oil droplets, and single. Conidiogenesis is polar on short denticles and with sympodial proliferation (Fig. 407). Hyphae are abundant with the cytoplasm retracted in cells, (2560) x( 1.5-2.2) (im, and with sterigmata on which fusiform blastoconidia are formed. Colonies are dimorphic, with the center flat to somewhat raised, glabrous to velvety hirsute, smooth to somewhat irregularly furrowed, dull, pale creamish-white to yellowish-brown. Growth near the margin is zonate, somewhat hairy to velutinous, and with the margin fringed. Growth on the surface of assimilation media (glucose): A ring, floating flocks and a sediment are formed. Dalmau plate culture on morphology agar: After 5 days at 17°C, extensive hyphae may be formed with the cytoplasm retracted. Yeastlike cells are ellipsoidal, (4.0-10.0) X(2.0-4.0) |im, with polar conidiogenesis and sympodial proliferation. Aerobic growth is whitish to pinkish-cream, dull, with the surface smooth, somewhat pustulate to reticulate, and covered with hyphal fascicles or tiny hairs. The aerial mycelium is made up of ramifying

791

acropetal chains of fusiform blastoconidia being formed on sterigmata. Fermentation: absent. Assimilation (25**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + +

-

+ +

-

+ + + + +

V

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + + s

-

+ + + + + + + + + n +

+ Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + Urease + Saccharate Nitrite + + Growth at 30X + D-Glucuronate 50% (w/w) Glucose Growth at ST^'C V Starch formation Co-Q: 10 (Boekhout et al . 1992b). Mol%G + C: 61.2-61.6 (BD Kurtzman 1990a). Cell wall hydrolyzates : Glucose, mannose low, galactose and glucosamine (Weijman 1979b, Weijman and Rodrigues de Miranda 1988, Boekhout et al. 1992b).

Origin of the strains studied: CBS 214.83, type strain of Sporobolomyces antarcticus, from lake sediment, J. Sugiyama, Lake Vanda, Victoria Land, Antarctica; CBS 516.83, type strain of Trichosporon oryzae, from unpolished new crop rice, H. Ito, Japan. Type strain: CBS 214.83.

Comments: The species Sporobolomyces antarcticus, Trichosporon oryzae and Sterigmatomyces aphidis have been considered conspecific because of high DNA-DNA binding values (Kurtzman 1990a). For the first two species this is also supported by nucleotide sequence analysis, as their partial 26S ribosomal DNA sequences were found to be identical (Boekhout et al. 1995a). However, the partial 26S ribosomal DNA sequence of Sterigmatomyces aphidis was found to be slightly different, and therefore this species is maintained as separate in this treatment. The basidioniycetous nature of these fungi is supported by positive diazonium blue B and urease reactions. Phylogenetic |affinity with the Ustilaginales is supported by morpholqgy (Boekhout 1987), the presence of a narrow pore-like structure between the conidia (Boekhout, unpublished data) and partial 26S rDNA nucleotides (Boekhout et al. 1995a). Arthroconidia as they occur Fig. 407. P. antarctica, CBS 214.83. Hyphae and chains of blastoconidia. in Trichosporon are not formed. It seems likely that hyphal cells in which the cytoplasm retracts may have Yeast morpholgy agar, 5 days, 25°C. Bar= lOjim.

Vic. Descriptions of anamorphic basidiomycetous genera and species

792

been interpreted as arthoconidia (see Ito et al. 1974). Trichosporon oryzae was reported to be highly resistant to gamma radiation (Ito et al. 1974). The suggested synonymy of Trichosporon oryzae with Candida edax (Jong and King 1977b) is not accepted, as this latter species is the anamorph of Stephanoascus smithiae (Ascomycetes), p. 402 (Gimenez-Jurado et al. 1994). 103.2. Pseudozyma aphidis (Henninger & Windisch) Boekhout (1995) Synonym: Sterigmatomyces aphidis Henninger & Windisch (1975b)

G r o w t h o n 5 % m a l t extract agar: After 5 days at 17°C, the cells are ftisiform, variable in size, ( 5 . 0 3 3 . 0 ) x ( 1 . 8 - 3 . 0 ) j i m , and contain many oil droplets. Budding is polar on short denticles. Hyphae are present with the cytoplasm retracted in the cells, (30-50) x ( 2 . 0 3.0) |im, and with sterigmata on which cylindrical to ftisiform blastoconidia, (20-36) x (2.0-2.7) |im, are formed. Colonies are dimorphic, flat, velvety-velutinous, dull, whitish to pale yellowish-cream, zonate towards the margin, and with the margin fringed. Growth o n assimilation m e d i a (glucose): A ring, floating flocks, a film and a sediment are present. D a l m a u plate culture o n m o r p h o l o g y agar: After 5 days at 17°C, hyphae are abundant. Aerobic growth is whitish, dull, velvety-velutinous, flat, with the center somewhat pustulate, and the margin fringed. The aerial mycelium consists of ramifying and acropetal chains of ftisiform blastoconidia. F e r m e n t a t i o n : absent. Assimilation (25**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s + + s + + + + +

-

+ + + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

s + s

-

+ + + s s + + + + n +

Additional assimilation tests a n d other g;ro^ characteristics: 2-Keto-D-gluconate + Starch formation -

Saccharate + Urease D-Glucuronate + Nitrite 50% (w/w) Glucose Growth at ST^'C Co-Q: 10. Mol% G + C: 61.5 (BD:: KurtzmarI 1990a). Cell wall hydrolyzates: Not determined.

+ + +

Origin o f t h e strain studied: C B S 517.83, type strain of Sterigmatomyces aphidis, from secretion of Aphididae on leaves of Solanum pseudocapsicum, W. Henninger and S. Windisch, Germany. Type strain: CBS 517.83. Comments: Pseudozyma aphidis was suggested to be conspecific with Pseudozyma antarcticus and Trichosporon oryzae (Kurtzman 1990a). However, based on the 64-68% DNA-DNA similarity between P aphidis and the remaining two species (Kurtzman 1990a), partial 26S ribosomal DNA sequences, and the presence of physiological differences, we regard P. aphidis as a separate species. The suggestion that this species belongs to the Ustilaginales (W. Henninger, unpublished data; Boekhout 1987) was confirmed by partial 26S rDNA sequences (Boekhout 1994, Boekhout et al. 1995a). The assimilation of methanol, ethanol, and galactitol, and growth in vitamin-free medium (Henninger and Windisch 1975b) were not confirmed by the present study. 103.3. Pseudozymaflocculosa(Traquair, Shaw & Jarvis) Boekhout & Traquair (Boekhout 1995) Synonyms: StephanoascusflocculosusTraquair, Shaw & Jarvis (1988b) SporothrixflocculosaTraquair, Shaw & Jarvis (1988b)

G r o w t h o n 5 % malt extract agar: After 5 days at 17°C, the cells are ftisiform, variable in size and with many oil droplets. Two size classes appear apparent, viz. long elements, measuring (13-35)x(2.0-3.0)(i-m and shorter elements of (3.0-7.0)x(1.5-3.0)[im. Conidiogenesis is polar, on short denticles and with sympodial proliferation. Hyphae, which measure ( 2 5 - 3 7 ) x ( l . 8 - 2 . 2 ) ( i m , are characterized by retracted cytoplasm. The hyphae have sterigmata on which fusiform blastoconidia are formed. Colonies are flat with the center somewhat warty, dull, whitish, and finely pruinose, but toward the margin they are somewhat zonate, finely whitish pruinose and with the margin fringed. Growth on the surface of assimilation media: Floating flocks, a thick film and a sediment are formed. D a l m a u plate culture o n m o r p h o l o g y agar: After 5 days at 17°C, the cells are mostly lysed. Aerobic growth is whitish, dull and flat with the center warty to somewhat pustulate and covered with a thin aerial mycelium. Hyphae have the cytoplasm retracted in the cells and measure (20-65) x (1.5-2.0) \km. The hyphae are characterized by sterigmata on which ramifying acropetal chains of ftisiform conidia occur, usually made up of two rows of long cylindrical to ftisiform cells, ( 2 0 ^ 0 ) x ( 2 . 0 2.5) jim, and with a terminal whorl of shorter fusiform blastoconidia, (3.0-9.0)x(2.0-3.0) [im. Fermentation: absent.

103. Pseudozyma Bandoni emend. Boekhout / T. Boekhout and J. W Fell

Assimilation (25**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s + + s +

-

s + +

-

s + + + +

-

s

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

s + s

-

+ + + + s s + + + n + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Urease Saccharate Nitrite D-Glucuronate + Growth at BO^'C 50% (w/w) Glucose Growth at ST'C Starch formation Co-Q: Not determined. Mor/o G + C: Not determined. Cell wall hydrolyzates: Not determined.

+ + +

Origin of the strain studied: CBS 167.88, leaf of clover {Trifolium pratense) infected with mildew (Erisyphe polygoni), J.A. Traquair, Ontario, Canada. Type strain: CBS 167.88. Comments: Stephanoascus flocculosus was described as a homothallic ascomycete forming thick, persistent asci with 2-4 galeate ascospores (Traquair et al. 1988b). However, this observation could not be confirmed by the present authors. The ascus-like structures illustrated by Traquair et al. (1988b) are probably chlamydospores. At present, there is substantial evidence that this fimgus represents a heterobasidiomycete. The morphological appearance of the colonies, and the presence of branched chains of ramoconidia (Traquair et al. 1988b) is similar to those occurring in anamorphs of Ustilaginales (Boekhout 1987). The basidiomycetous nature of this fimgus is supported by positive diazonium blue B and urease reactions, as well as partial nucleotide sequences of the 26S ribosomal DNA (Boekhout 1994, Boekhout et al. 1995a, Kurtzman and Robnett 1995). Molecular data support a close phylogenetic affiliation with the Ustilaginales, viz. Ustilago maydis (Boekhout et al. 1995a). Contrary to the data of Traquair et al. (1988b), we did not observe assimilation of lactose and ethanol. The species has potential to antagonize cucumber powdery mildew {Sphaerotheca fuliginea) (Jarvis et al. 1989).

793

103.4. Pseudozyma fusiformata (Buhagiar) Boekhout (1995) Synonym: Candida fusiformata Buhagiar (1979)

Growth on 5% malt extract agar: After 5 days at \TC, the cells are cylindrical, ellipsoidal to fiisiform, (4.5-8.5)x(l.0-4.0)[im, single, and usually contain 1-2 oil droplets. Conidiogenesis is polar and either sessile or on a short denticle. Short hyphae are present. Colonies are butyrous, smooth to wrinkled, glabrous, shiny, whitish, cream, light salmon to vinaceous-buff, and with the margin entire. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 5 days at 17°C, short hyphal cells may occur. Hyphae usually are for the greater part lysed and have retraction septa. Aerobic growth is pinkish-cream to salmon, shiny, weakly venose or reticulate, and with the margin entire, straight or lobate. A thin aerial mycelium occurs, made up of acropetal chains of fusiform blastoconidia. Fermentation: absent. Assimilation (25**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s + + s + v + + + + + s v

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + s s s + + + v + s + s + n + +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Urease Saccharate Nitrite D-Glucuronate + Growth at 25*'C 50% (w/w) Glucose Growth at SO'^C Starch formation Growth at 2>TC Co-Q: Not determined. Mol% G + C: 58.1 (7;^: Buhagiar 1979). Cell wall hydrolyzates: Mannose low (Weijman et al. 1988).

+ + + s

Origin of the strains studied: CBS 6232, leaves of barley, H. Fokkema, Netherlands; CBS 6951, cauliflower {Brassica oleacea var. botrytis), R.W.M. Buhagiar, Great Britain. Type strain: CBS 6951. Comments: The positive urease and diazonium blue B reactions clearly indicate the basidiomycetous nature of

Vic. Descriptions of anamorphic basidiomycetous genera and species

794

this species, as has been suggested by Weijman et al. Additional assimilation tests and other igroi (1988). This fungus does not fit the current definitions characteristics: + + Urease of the anamorphic genera Cryptococcus and Rhodotorula 2-Keto-D-gluconate Saccharate Nitrite + because of its inabihty to synthesize extracellular starch- D-Glucuronate + Growth at BO^'C + like compounds and its ability to assimilate mjo-inositol. 50% (w/w) Glucose Growth at 2>TC Partial 26S ribosomal DNA sequences strongly suggest Starch formation that this species is an anamorph of the Ustilaginales Co-Q: Not determined. G + C: Not determined. (Boekhout et al. 1995a), which is supported by morphol- Mol% Cell wall hydrolyzates: Not determined. ogy, viz. the presence of an aerial mycelium made up of branched, acropetal chains of fijsiform blastoconidia. Origin of the strain studied: CBS 319.87, litter of Scirpus microcarpus, growing in a seepage area on a steep hill side, Vancouver, R.J. Bandoni, B.C., Canada. 103.5. Pseudozyma prolifica Bandoni (1985) Type strain: CBS 319.87. Growth on 5% malt extract agar: After 5 days at 17°C, the cells are fusiform, variable in size, (7-50) x( 1.5- Comments: Pseudozyma prolifica has been described 2.5) |im, and contain many oil droplets. Conidiogenesis as a pleomorphic hyphomycete forming scolecoconidia, is polar, and on short denticles. Hyphae occur, with stauroconidia, blastoconidia, arthroconidia and chlamythe cytoplasm retracted in cells, and measure (17- dospores (Bandoni 1985). This author noted similar30)X(2.0-3.5) fim (ca. 1.0 (im wide hyphae occur as well). ities of the conidia to those of species of aquatic Sterigmata occur on which fusiform blastoconidia are hyphomycetes, including species of Articulospora, Variformed. Colonies are dimorphic with the center somewhat cosporium, Dendrospora and Tricladium, but did not raised and warty, dull, whitish to cream, and covered with suggest a relationship for the taxon. However, the fine hairs. Near the margin, growth is flat, finely hirsute, culture CBS 319.87 of Pseudozyma prolifica, deposited and with the margin fringed. in the CBS collection, morphologically strongly resembles anamorphs of Ustilaginales. The basidiomycetous Growth on the surface of assimilation media nature of P. prolifica is supported by positive diazo(glucose): Floating flocks and a sediment are formed. nium blue B and urease reactions, and partial 26S ribosomal DNA nucleotide sequences (Boekhout et al. Dalmau plate culture on morphology agar: After 1995a). 5 days at 17°C, hyphae are abundant, have the cytoplasm retracted in cells, and measure (24-50)x(2.0-3.0) jim. 103.6. Pseudozyma rugulosa (Traquair, Shaw & The hyphae have retraction septa and sterigmata on which Jarvis) Boekhout & Traquair (Boekhout fiisiform blastoconidia, (12-37)x(2.0-3.0) |im in size, are 1995) formed. Aerobic growth is whitish, velvety-velutinous, flat Synonyms: to somewhat pustulate, and with the margin fringed. Stephanoascus rugulosus Traquair, Shaw & Jarvis (1988b) Sporothrix rugulosa Traquair, Shaw & Jarvis (1988b)

Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s + + + + +

-

+ +

-

+ + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + + s

-

+ + +

-

+ s +

-

+ n + +

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ellipsoidal to fusiform, (8.0-20) x (2.02.5) |im, and with many oil droplets. Budding is polar on short denticles. Hyphae occur with the cytoplasm retracted in the cells, (25-42)x(1.8-2.5)|im, and have sterigmata on which ramifying chains of fusiform blastoconidia are formed. Growth on the surface of assimilation media: A ring, floatingflocksand a sediment are present. Dalmau plate culture on morphology agar: After 5 days at 17°C, the cells grow poorly. Aerobic growth is pale yellowish-brown, dull, flat, venose to somewhat pustulate, covered with fine hairs, and with the margin entire to somewhat fringed. The aerial mycelium consists of ramifying acropetal chains of fusiform blastoconidia of variable shape, (5.0-20.0)x(l.8-3.0)(im,

795

lOS. Pseudozyma Bandoni emend. Boekhout / T. Boekhout and J.W. Fell

gradually becoming smaller towards the end of the chain.

Synonyms: Candida tsukubaensis Onishi (1972) Vanrija tsukubaensis (Onishi) R.T. Moore (1987a) Cryptococcus tsukubaensis (Onishi) Rodrigues de Miranda & Weijman (Weijman et al. 1988)

Fermentation: absent. Assimilation (25"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + s +

-

s + +

-

+ + + + + + +

103.7. Pseudozyma tsukubaensis (Onishi) Boekhout (1995)

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n w + + s s

-

+ + + s + + + + + n + w

Additional assimilation tests and other growth characteristics: Starch formation + 2-Keto-D-gluconate -

+ Urease Saccharate + Nitrite D-Glucuronate Growth at 37°C 50% (w/w) Glucose Co-Q: Not determined. Mol% G + C: Not determined. Cell wall hydrolyzates: Not determined.

+ + +

Origin of the strain studied: CBS 707.88, leaf of maize {Zea mays) infected with molds, J.A. Traquair, Ontario, Canada. Type strain: CBS 170.88.

Growth on 5% malt extract agar: After 5 days at 17°C, the cells are ellipsoidal, (5.0-15)x(2.8^.2) |im, with 2 ^ oil droplets, and single. Budding is polar and either sessile or on short denticles. Hyphae occur, with the cytoplasm retracted in cells and measure (1080)x(1.0-3.0)|im. Sterigmata occur on which cylindrical tofiisiformblastoconidia are formed. Colonies are dimorphic, flat, with the central part yeastlike, glabrous, smooth to somewhat warty, and the margin flat and covered with acute hyphal fascicles, and toward the margin, growth becomes hirsute, dull, pale yellowish-brown, and with the margin fringed. Growth on the surface of assimilation media (glucose): A ring and a sediment are formed. Dalmau plate culture on morphology agar: After 5 days at 17°C, hyphae are formed, which are lysed for the most part. Aerobic growth is grayish-cream, dull, hirsute and with the margin fringed. Hyphae occur with the cytoplasm retracted in cells and with sterigma near the septa. AUantoidal blastoconidia, (12-23)x(2.5-3.5)|im, occur on sterigmata, short denticles or are sessile on the hyphae. A thin aerial mycelium is made up of ramifying, acropetal chains of fusiform blastoconidia. Fermentation: absent. Assimilation (25**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s + + + + +

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + +

Comments: Stephanoascus rugulosus was described as a homothallic ascomycete, forming globose asci with 1-4 galeate ascospores (Traquair et al. 1988b). However, the ascomycetous nature of this fungus was not confirmed by the present authors. On the contrary, there is substantial + + + evidence that this fungus belongs to the Ustilaginales (Heterobasidiomycetes). This is supported by positive + + diazonium blue B and urease reactions, partial nucleotide + + sequences of the 26S ribosomal DNA (Boekhout 1994, + + + s Boekhout et al. 1995a, Kurtzman and Robnett 1995) n s and the mode of conidiogenesis, viz. the formation of + acropetally and ramifying chains of fusiform blastoconidia + s (see Traquair et al. 1988b, Boekhout 1987). In our opinion the ascus-like structures, as depicted by Traquair et al. Additional assimilation tests and other growth (1988b), were chlamydospores with oil droplets. The characteristics: + Urease + reported assimilation of lactose (Traquair et al. 1988b) 2-Keto-D-gluconate Nitrite + Saccharate could not be confirmed. Pseudozyma rugulosus has an D-Glucuronate + Growth at 30°C + antagonistic capacity against cucumber powdery mildew 50% (w/w) Glucose Growth at 37T (Jarvis et al. 1989). Starch formation -

796

Vic. Descriptions of anamorphic basidiomycetous genera and species

Co-Q: Not determined. Mol% G + C: 53.3 (7^: Barnett et al. 1990). Cell wall hydrolyzates: Mannose, galactose, glucose, mannitol, inositol and probably arabinitol (H. Roeijmans and T. Boekhout, unpublished results).

Origin of the strain studied: H. Onishi, Japan. Type strain: CBS 6389.

CBS 6389, flower.

Assimilation (25**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ + + s + +

+ + Comments: The positive diazonium blue B and urease + + tests clearly indicate the basidiomycetous nature of this + species. The ability to assimilate mjo-inositol and the + + + + inability to synthesize extracellular starch-like compounds + also occur in Pseudozyma fusiformata and other related + s species. Candida tsukubaensis has been transferred to n + Cryptococcus based on the presumed presence of xylose + + + + in whole-cell hydrolyzates (Weijman and Rodrigues de Miranda 1988, Weijman et al. 1988). However, the Additional assimilation tests and other growth morphological appearance of this fungus is similar to characteristics: Urease + + that of anamorphs of Ustilaginales. Therefore, the cell 2-Keto-D-gluconate Nitrite + wall composition was reinvestigated, and the presence of Saccharate + Growth at 30°C + xylose could not be confirmed (H.J. Roeijmans, unpub- D-Glucuronate Growth at 37T s 50% (w/w) Glucose lished results). Moreover, analysis of partial nucleotide Starch formation sequences of 26S ribosomal DNA strongly supports a Co-Q: 10 (Boekhout et aI. 1992b). close phylogenetic relationship with Ustilago maydis Mol% G + C: Not determined. Cell wall hydrolyzates: Glucose, galactose, mannose and arabinose (Boekhout et al. 1995a). (Dorfler 1990).

103.8. Ustilago maydis (De Candolle) Corda (1842) Growth on 5% malt extract agar: After 5 days at 17°C, the cells are fusiform, variable in size, (1040)x( 1.5-3.0) ^m, with many oil droplets and polar conidiogenesis. Hyphae occur, with the cytoplasm retracted in cells, measure (20-40)x (2.0-3.0) [im, and have sterigmata on which fiisiform blastoconidia are formed. Colonies are dimorphic, with the center flat, slightly pustulate to venose, dull, pale yellowish-brown to olivaceous yellowbrown, finely pruinose, but locally smooth and somewhat shiny, zonate towards the margin, radially fibrillar, and with the margin fringed. Growth on the surface of assimilation media (glucose): Floating flocks and a sediment are formed. Dalmau plate culture on morphology agar: After 5 days at \TC, hyphae occur, with retracted cytoplasm, retraction septa and sterigmata on whichfiisiformto cylindrical blastoconidia measuring (9.0-20.0)x(2.0-3.0) |im are formed. Hyphae may disarticulate through dissolution of the cell wall between the cytoplasm-containing cells. Aerobic growth is grayish-white to gray, dull, finely velutinous, with the center raised, irregular to somewhat pustulate, and the margin fringed. The aerial mycelium consists of ramifying and acropetal chains of fiisiform conidia. Fermentation: absent.

Origin of the strain studied: CBS 504.76, from maize {Zea mays), Netherlands. Type strain: None designated. Comments: The description of the asexual state of Ustilago maydis is presented here for comparative purposes due to the close relationship between U. maydis (and probably other smuts occurring on monocoteledons) and the Pseudozyma species determined from phenotypic and molecular data. Discussion on anamorphs of Ustilaginales: Species oi Pseudozyma, which share morphological, physiological and biochemical characteristics, have been placed in various genera of fungi. Although there may be some disagreement regarding the introduction of anamorph names for holomorphic fungi, such as most species of the Ustilaginales, the frequent isolation of anamorphs that lack teleomorphs, requires a form-genus to tentatively categorize these anamorphs. Kurtzman (1990a) suggested that Vanrija R.T. Moore may be an appropriate genus for one of these anamorphs (viz. Sporobolomyces antarcticus). We do not favor this solution, as the genus Vanrija is poorly defined as a basidiomycetous counterpart of Candida and Torulopsis (Moore 1980). Recent molecular work has demonstrated that this genus is highly polyphyletic (Fell et al. 1992, 1995), and that the type species Vanrija humicola (Daszewska) R.T. Moore belongs to a different evolutionary lineage when compared with the anamorphs of Ustilaginales. Pseudozyma is physiologically characterized by the

103. Pseudozyma Bandoni emend. Boekhout / T. Boekhout and J. W Fell

ability to assimilate wj^o-inositol and D-glucuronate, and the inability to form extracellular starch-like compounds, Morphologically, the strains usually have flat, rapidly expanding colonies, which frequently become zonate. The aerial mycelium consists of ramifying, acropetal chains

of fusiform conidia; chlamydospores may be present, but ballistoconidia are absent. The available molecular data suggest that all these fimgi belong to the Ustilaginales (Boekhout et al. 1995a), as has been suggested earlier based on comparative morphology (Boekhout 1987).

797

798

Vic. Descriptions of anamorphic basidiomycetous genera and species

104. Reniforma Pore & Sorenson W.G. Sorenson and R.S. Pore Diagnosis of the genus Asexual reproduction is by budding on a narrow base. Cells are kidney-shaped with a flat base circumscribed by a brim. The cells tend to be arranged in orderly stacks. Sexual reproduction is unknown. Sugars are not fermented. Neither nitrate nor mjo-inositol is assimilated. Starch-like compounds are not produced. Diazonium blue B and urease reactions are positive. Type species Reniforma strues Pore & Sorenson Species accepted 1. Reniforma strues Pore & Sorenson (1990) Systematic discussion of the species 104.1. Reniforma strues Pore & Sorenson (1990) Growth in glucose-yeast extract-peptone-water: After 3 days at 25°C, the cells are kidney-shaped, (36x2.3-5 |im), and occur singly, in pairs, or small clusters. Reproduction is by budding (Figs. 408, 409). The cells have aflatbase and tend to be arranged in stacks or layers. There is a brim radiating from the basal margin of the cell. A sediment is present but no pellicle. Growth is similar on 5% or 15% malt extract. After one month at 25°C, a yellowish-white, dull, wrinkled, creeping pellicle with sediment is formed. Growth on the surface of assimilation media: Thin, climbing pellicles are formed. Growth on yeast extract-malt extract (YM) agar: Growth is rapid at 25-30°C. The colonies are waxy and spreading. On primary isolation media, the colonies are either spreading or yeastlike. Dalmau plate culture on yeast morphology agar: After 7 days at 25°C, growth under the coverglass is

Fig. 408. R. strues, NRRL Y-17275. Cell morphology and budding, after 3 days in GYPW. Bar = 2|im. (a) Budding cycle viewed fi-om the top of the cell, (b) Side view of budding and the cell brim, (c) Typical microscopic view.

sparse and thin. Aerobic growth is white to cream-colored, abundant, dry and pasty. The margin is irregular and pseudomycelium is not produced. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+

-

+

-

+

-

+/w

—0.1/iin

Fig. 409. R. strues, NRRL Y-17275. Transmission electron micrograph of the budding process. Budding may occur at other locations on the cell, but typically occurs as shown.

104. Reniforma Pore & Sorenson / W.G. Sorenson and R.S. Pore

Additional assimilation tests and other growth characteristics: Starch formation Urease + DNAase Co-Q: Not determined. Mol% G + C: Not determined.

Amylase Growth at 37*^0

799

Type strain: NRRL Y-17275 (ATCC 66374, CBS 8263).

-

Origin of the strains studied: NRRL Y-17275, and additional isolates were from a municipal wastewater treatment facility, West Virginia.

Comments on the genus The lamellar cell wall, enteroblastic budding, and positive diazonium blue B and urease tests suggest a basidiomycetous affinity for R. strues. The remarkable kidneyshaped cells which produce miniature kidney-shaped buds distinguish R. strues from all other known yeasts.

800

Vic. Descriptions of anamorphic basidiomycetous genera and species

105. Rhodotorula EC. Harrison J.W. Fell and A. Statzell-Tallman Diagnosis of the genus Cells are spheroidal, ovoidal or elongate. Reproduction is by multilateral or polar budding; pseudo- or true hyphae may develop. Ballistoconidia are not formed. Some strains synthesize red or yellow pigments in malt agar cultures. Most, but not all, species lack the ability to assimilate inositol. When inositol is utilized, D-glucuronate is not assimilated. Starch-like substances are not synthesized by any of the species (see Table 85). Fermentative ability is lacking. Diazonium blue B reaction and presence of urease are positive. Coenzymes Q-9 and Q-10 are present. Xylose is lacking in cell hydrolyzates. Some species may represent anamorphic stages of Rhodosporidium, Leucosporidium and other genera with simple septal pores. Table 85 Key characteristics of the genera Cryptococcus and Rhodotorula Starch formation

Assimilation

Tables

Inositol

D-Glucuronate

+

+

Cryptococcus: (1) nitrate positive, Table 76, p. 745; (2) nitrate negative, Table 77, p. 745

+

+

Cryptococcus: Table 79, p. 746

+

Cryptococcus: Table 78, p. 746 Rhodotorula: (1) nitrate positive. Table 90, p. 804; (2) nitrate negative, Table 91, p. 804 Rhodotorula: (1) nitrate positive. Table 88, p. 803; (2) nitrate negative. Table 89, p. 803 Rhodotorula: Table 87, p. 803

Type species Rhodotorula glutinis (Fresenius) FC. Harrison Species accepted 1. Rhodotorula acheniorum (Buhagiar & J,A. Bamett) Rodrigues de Miranda (1975) 2. Rhodotorula acuta (S. Goto) Rodrigues de Miranda & Weijman (1988) 3. Rhodotorula araucariae Grinbergs & Yarrow (1970) 4. Rhodotorula armeniaca Shivas & Rodrigues de Miranda (1983) 5. Rhodotorula aurantiaca (Saito) Lodder (1934) 6. Rhodotorula auriculariae (Nakase) Rodrigues de Miranda & Weijman (1988) 7. Rhodotorula bacarum (Buhagiar) Rodrigues de Miranda & Weijman (1988) 8. Rhodotorula bogoriensis (Deinema) von Arx & Weijman (1979) 9. Rhodotorula buffonii (Ramirez Gomez) Roeijmans, van Eijk & Yarrow (1989) 10. Rhodotorula diffluens (Ruinen) von Arx & Weijman (1979) 11. Rhodotorula ferulica Sampaio & van Uden (1991) 12. Rhodotorula foliorum (Ruinen) Rodrigues de Miranda & Weijman (1988) 13. Rhodotorula fragaria (J.A. Barnett & Buhagiar) Rodrigues de Miranda & Weijman (1988) 14. Rhodotorula fujisanensis (Soneda) Johnson & Phaff (1978) 15. Rhodotorula futronensis (Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989) \6. Rhodotorula glutinis (Fresenius) EC. Harrison (1928) a. Rhodotorula glutinis (Fresenius) EC. Harrison var. glutinis (1958) b. Rhodotorula glutinis var. dairenensis Hasegawa & Banno (1958) 17. Rhodotorula graminis di Menna (1958) 18. Rhodotorula hinnulea (Shivas & Rodrigues de Miranda) Rodrigues de Miranda & Weijman (1988) 19. Rhodotorula hordea Rodrigues de Miranda & Weijman (1988) 20. Rhodotorula hylophila (van der Walt, van der Klift & D.B. Scott) Rodrigues de Miranda & Weijman (1988) 21. Rhodotorula ingeniosa (di Menna) von Arx & Weijman (1979) 22. Rhodotorula jauanica (Ruinen) von Arx & Weijman (1979)

801

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman 23. 24. 25. 26. 27. 28. 29. 30. 31. 32. 33. 34.

Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula Rhodotorula

lactosa Hasegawa (1959) lignophila (Dill, Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989) marina Phaff, Mrak & Williams (1952) minuta (Saito) EC. Harrison (1928) mucilaginosa (Jorgensen) EC. Harrison (1928) muscorum (di Menna) von Arx & Weijman (1979) nothofagi (Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989) philyla (van der Walt, van der Klift & D.B. Scott) Rodrigues de Miranda & Weijman (1988) phylloplana (Shivas & Rodrigues de Miranda) Rodrigues de Miranda & Weijman (1988) pilati (EH. Jacob, Faure-Raynaud & Berton) J.A. Barnett, Payne & Yarrow (1983) pus tula (Buhagiar) Rodrigues de Miranda & Weijman (1988) sonckii (Hopsu-Havu, Tunnela & Yarrow) Rodrigues de Miranda & Weijman (1988)

Key to species See Table 86. 1. a Starch synthesized b Starch not synthesized -^ 2 2(1). a Inositol assimilated —> 3 (Table 87) b Inositol not assimilated —> 4 3(2). a Trehalose assimilated b Trehalose not assimilated 4(2). a D-Glucuronate assimilated -^ 5 b D-Glucuronate not assimilated -^ 25 5(4). a Nitrate assimilated -^ 6 (Table 88) b Nitrate not assimilated -^ 18 (Table 89) 6(5). a Raffinose assimilated -^ 7 b Raffinose not assimilated -^ 12 7(6). a Melibiose assimilated -^ 8 b Melibiose not assimilated -^ 9 8(7). a Sucrose assimilated b Sucrose not assimilated 9(7). a Hexadecane assimilated b Hexadecane not assimilated ^ 1 0 10(9). a L-Rhamnose assimilated b L-Rhamnose not assimilated -^ 11 11(10). a Saccharate assimilated b Saccharate not assimilated 12(6). a Colony color reddish-orange b Colony color not reddish-orange -^ 13 13(12). a Sucrose assimilated -^ 14 b Sucrose not assimilated —^16 14(13). a Cellobiose assimilated -> 15 b Cellobiose not assimilated 15(14). a D-Glucosamine assimilated b D-Glucosamine not assimilated 16(13). a Maltose assimilated b Maltose not assimilated —> 17 17(16). a Salicin assimilated b Sahcin not assimilated 18(5). a Sucrose assimilated -^ 19 b Sucrose not assimilated —> 22 19(18). a Erythritol assimilated b 20(19). a b 21(20). a b 22(18). a b

Erythritol not assimilated —> 20 A/^-Acetyl-D-glucosamine assimilated iV-Acetyl-D-glucosamine not assimilated Growth at 2>TC Absence of growth at 37°C Maltose assimilated Maltose not assimilated -^ 23

see key to Cryptococcus species:

R. hinnulea: R. phylloplana:

p. 743

p. 816 p. 824

R. lactosa: p. 818 R. jauanica: p. 818 R. ingeniosa: p. 817 Leucosporidium scottii:

p. 673

R. muscorum: p. 822 R. fragaria: p. 811 R. aurantiaca: p. 807

R. diffluens: R. ferulica: R. hordea: R. buffonii:

p. p. p. p.

810 810 816 809

R. pustula: R. foliorum:

p. 825 p. 811

R. acuta: p. 805 (also see Sterigmatomyces elviae): p. 844 R. minuta:

p. 820

^21 R. mucilaginosa: p. 820 R. marina: p. 819 R. bogoriensis: p. 808

00

Table 86 Key characteristics of species in the genus Rhodotorula Species

Colora Pseudohyphae

Rhodotorula acheniorum R. acuta

y-p

R. araucariae R. armeniaca R. aurantiaca R. auriculariae R. bacarum R. bogoriensis R. buffonii R. difluens R. ferulica

Y-P

R. foliorum R. fragaria R. fujisanensis R. futronensis R. glutinis R. graminis R. hinnulea R. hordea R. hylophila R. ingeniosa R. jaoanica R. lactosa R. lignophila R. marina R. minuta R. mucilaginosa R. museorurn R. nothofagi R. philyla R. phylloplana R. pilati R. pustula

C

rud rud

StaC

Growthd 37°C VF

Suc

Ma1

Cel

Tre

Me1

Raf

Mlz

Assimilation Rha D-G N-A

Ery

+

+

+

+

+

+

+

-

+

+

-

-

-

-

-

-

-

+

WI-

-

-

+

-

-

-

-

-

-

-

_ +

s

v

+ +

s +

s

-

+ +

+ +

0

-

roiy

rud

-

-

C

-

-

-

bic c-yb

rud rud

-

-

-

-

-

-

gb bc

+

-

-

-

+

+

-

-

+

+

C

+

-

-

-

+

bu rio

rud rud

-

-

-

-

+

v

+

Y Y P

-

-

V

+

+

+

-

-

-

-

-

-

-

-

+

YC

+

-

-

s

+

s +

-

+

+

+

+

-

+

-

-

i

+

i

-

-

+

-

s s +

+

-

+

-

+

-

-

+

+

+

+

+

+

-

+ -

-

-

-

+

s

-

-

-

-

+

+

s

s

l

-

s

-

+

s-

-

-

-

+

-

+

+

+

-

-

-

-

+

-

+

-

+ -

-

w

+

+

-

+ +

+

+

-

+

-

i

-

+

-

- w I + -

-

-

+ -

-

+

-

+ -

-

+

-

-

-

-

-

-

-

-

-

+

+

Glc

-

-

-

-

-

Sac

+

-

-

-

Nit

+ -

+

+ s +

-

v

Hex

-

-

-

-

-

+

+ +

-

-

-

-

v

+

+

-

Ino

-

+

-

-

Sal

-

+

-

-

-

+

-

-

-

+

+

-

+

+

+

-

+

+

+

v -

-

v

-

+

-

-

+

-

-

-

-

t

t

+

-

+ + +

+

-

-

+

+

+

-

s

+

+

-

_ v

-

+

-

+

+

-

Color of culture. Abbreviations: y-p, yellowish-pink; c, cream; bic, brown or cream; o, orange; b, brown; g, gray; be, beige; bu, buff; r, red; ro, reddish-orange; y. yellow; p, pink. Presence of pseudohyphae. Abbreviation: rud, rudimentary. Starch formation. Growth at 37°C; growth in vitamin-free medium.

a

N 0

-

t

-

+

-

-

-

t +

+

- +

-

-

t t

+ + t

Abbreviations: SUC,sucrose; Mal, maltose; Cel, cellobiose; Tre, trehalose; Mel, melibiose; Raf, raffinose; Mlz, melezitose; Rha, L-rhamnose, o-G, o-glucosamine, N-A, N-acetyl-D-glucosamine; Ery, erythritol; Sal, salicin; Ino, inositol; Hex, hexadecane; Nit, nitrate, Sac, saccharate, Glc, o-glucuronate.

-

-

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

803

Table 87 Species in the genus Rhodotorula with the following characteristics: starch formation -, inositol +, D-glucuronate -, nitrate + Species

Assimilation

Starch formation Inositol

D-Glucuronate

Nitrate

Trehalose

+

-

+

+

Rhodotorula hinnulea

-

R. phylloplana

s

+

Table 88 Species in the genus Rhodotorula with the following characteristics: starch formation -, inositol -, D-glucuronate +, nitrate + Species

Starch formation

Reddish colony color

j ^ ^ ^^^

Rhodotorula aurantiaca

Assimilation^ ^^j ^^^ ^^^

^.^

g^^

^^^

+ +

+

s +

+

R. diffluens

+

+

+

+

-

R. ferulica

+

+

+

+

+

R. foliorum

+

+

-

-

s

R. fragaria

+

+

+

+

+

R. hordea

+

+

+

+

+

R. ingeniosa

+

+

+

+

+

-

^^^

R. jauanica

+

+

-

+

+

+

+

-

R. lactosa

+

+

+

+

+

+

+

+

R. muscorum

+

+

+

+

+

4-

+

+

+

-

-

+

-

-

+

R. pustula

+

+

Leucosporidium scottii

+

+

+

+

w

-

+

+

+

+

+ +

R. buffonii

-

V

-

j ^ ^ ^_^

+

+

-

^^^

^^^

+

s

V

+

s

+ s

-

s

+

-

+

+

+

-

+ +

^ Abbreviations: Ino, inositol; Glc, D-glucuronate; Nit, nitrate; Sue, sucrose; Mai, maltose; Cel, cellobiose; Mel, melibiose; Raf, rafifinose; Rha, L-rhamnose; D-G, D-glucosamine; Sal, salicin; Hex, hexadecane; Sac, saccharate.

Table 89 Species in the genus Rhodotorula with the following characteristics: starch formation -, inositol -, D-glucuronate +, nitrate Species

Starch formation

Rhodotorula acuta

-

Growth at 2>TC +

—^^ -

—^ +

—^ -

+ -

-

+

+

+

^-

-

-

-

+

R. hylophila

-

-

_

+

R. lignophila

-

-

-

+

-

R. marina

-

-

-

+

-

+

v

R. minuta

-

v

-

+

-

+

-

R. mucilaginosa

-

+

- v -

+

vv

+

R. philyla

-

-

-

-

+

_

-

_

-

-

_

-

_

-

^ +

+

s +

-

_ s

+

+

+ _

+ V

J^

S

R. bogoriensis

+

-

Assimilation^ —^ —^

—^

_ s

-

-

-

+

-

+

-

^ Abbreviations: Ino, inositol; Glc, D-glucuronate; Nit, nitrate; Sue, sucrose; Mai, maltose; Cel, cellobiose; Tre, trehalose; A'^-A, A'^-acetyl-Dglucosamine; Ery, erythritol. 23(22). a b 24(23). a b

Cellobiose assimilated Cellobiose not assimilated Trehalose assimilated Trehalose not assimilated

R. lignophila: p. 818 —> 24 R. philyla: p. 823 R. hylophila: p. 817

Vic. Descriptions of anamorphic basidiomycetous genera and species

804 25(4). a b 26(25). a b 27(26). a b 28(27). a b 29(28). a b 30(28). a b 31(27). a b 32(26). a b 33(25). a b 34(33). a b 35(33). a b 36(35). a b 37(36). a b

Nitrate assimilated -> 26 (Table 90) Nitrate not assimilated —^33 (Table 91) Sucrose assimilated -^ 27 Sucrose not assimilated -^ 32 Melezitose assimilated -^ 28 Melezitose not assimilated -^ 31 Erythritol assimilated -^ 29 Erythritol not assimilated —» 30 Melibiose assimilated Melibiose not assimilated Colony cream-colored Colony orange to red-colored Growth in vitamin-free medium Absence of growth in vitamin-free medium Growth in vitamin-free medium Absence of growth in vitamin-free medium Sucrose assimilated —> 34 Sucrose not assimilated -^35 Raffinose assimilated Raffinose not assimilated Cellobiose assimilated —> 36 Cellobiose not assimilated Trehalose assimilated Trehalose not assimilated ^ 3 7 Growth in vitamin-free medium Absence of growth in vitamin-free medium

R. acheniorum: R. bacarum: R. pilati: R. glutinis: R. graminis: see Rhodosporidium malvinellum: R. araucariae: R. sonckii:

p, 805 p, 808 p, 824 p, 814 p, 815 p 686 p, 806 p, 826

R. mucilaginosa: p. 820 R. auriculariae: p. 807 R. armeniaca: p. 806 R. futronensis: p. 813 R. nothofagi: p. 823 R. fujisanensis: p. 812

Table 90 Species in the genus Rhodotorula with the following characteristics: starch formation -, inositol - D-glucuronate -, nitrate + Species

Starch formation

Red colony color

Assimilation^ Ino

Glc

Sue

Nit

Mel

Mlz

Ery

Growth in vitaminfree medium

Rhodotorula acheniorum R. araucariae R. bacarum R. glutinis R. graminis R. pilati R. sonckii Rhodosporidium malvinellum ^ Abbreviations: Ino, inositol; Glc, D-glucuronate; Nit, nitrate; Sue, sucrose; Mel, melibiose; Mlz, melezitose; Ery, erythritol.

Table 91 Species in the genus Rhodotorula with the following characteristics: starch formation - inositol -, D-glucuronate -, nitrate Species

Starch formation

Assimilation^ Ino

Glc

Nit

Sue

Cel

Tre

Rhodotorula armeniaca R. auriculariae R. fujisanensis R. futronensis R. mucilaginosa R. nothofagi Abbreviations: Ino, inositol; Glc, D-glucuronate; Nit, nitrate; Sue, sucrose; Cel, cellobiose; Tre, trehalose; Raf, raffinose.

Raf

Growth in vitaminfree medium

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

805

Additional assimilation tests and other growth characteristics:

Systematic discussion of the species 105.1. Rhodotorula acheniorum (Buhagiar & J.A. Barnett) Rodrigues de Miranda (1975) Synonym: Sterigmatomyces acheniorum Buhagiar & J.A. Barnett (1973)

Growth in 5% malt extract: After 3 days at 2 5 T , the cells are ellipsoidal, mostly elongate, (1.6-3.9)x(2.48.2) jim, and contain conspicuous fat globules. The bud may be borne on a short pedicel. After one month there is a ring and a sediment; no pellicle forms (Fig. 410).

Starch formation 2-Keto-D-gluconate n Urease 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Growth at 30''C D-Glucuronate Growth at 37*'C 50% (w/w) Glucoseyeast extract agar 10% NaCl/5%) glucose w Co-Q: 10 (Sugiyama et al. 1985). Mol% G + C: 53.9, CBS 6386 (BD: Kurtzman, personal communication). Cell hydrolyzates: Mannose low, malic acid (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Fresh strawberries in England (Buhagiar and Barnett 1973). Type strain: CBS 6386.

Fig. 410. R. acheniorum, CBS 6386. Cells grown in glucose-yeast extract-peptone water, for 3 days at 25°C, budding on short pedicels. Bar=10jim.

Growth on 5% malt agar: After 3 days at 25°C, the colony is buff, occasionally pale yellowish-pink, and smooth to rough. After 3 weeks or longer, the colony is pale pink-vinaceous with well-defined margins. Dalmau plate culture on corn meal agar: After one week, short chains of budding cells with sparse pseudomycelium are present. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s + + + + w + + +

-

+ + + +

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Comments: The original isolations, from strawberries (Buhagiar and Barnett 1973), occurred in three successive years (1969, 1970 and 1971); in addition, the 1990 "CBS List of Yeasts" includes an isolate from the leaves of Callistemon viminalis in Australia from J.F. Brown. The original description reported that buds were formed on sterigmata, ~1 \\xa in length, and separation of the cell and its bud occurred at the cell, at the bud, or midway between the cells. This method of cell separation does not conform to the description in the diagnosis of the genus Sterigmatomyces, which is limited to midcell separation. Rodrigues de Miranda (1975) did not observe sterigmata and reported that the divided cells were connected by "sharp tips of both cells". Based on this mode of cell separation and the red color of the colony, Rodrigues de Miranda (1975) transferred the species from Sterigmatomyces to Rhodotorula. Nucleotide sequence analysis in our laboratory (unpublished) indicates that this species is related to the Ustilaginales. This relationship is also suggested by the low level of mannose in the cell hydrolyzates, which is characteristic of the smut-related yeasts.

+

105.2. Rhodotorula acuta (S. Goto) Rodrigues de Miranda & Weijman (Weijman et al. 1988)

+ + + w

Synonyms: Candida acutus S. Goto (1979a) Candida dulciaminis Tokuoka, Ishitani, S. Goto & Komagata (1987) Rhodotorula dulciaminis (Tokuoka, Ishitani, S. Goto & Komagata) Roeijmans, van Eijk & Yarrow (1989)

-

-

+ + +

-

+ + +

-

+ +

-

Growth in 5% malt extract: After 3 days at 2 5 T , the cells are ovoidal to ellipsoidal, (2.7-5) x (3-8) [Jim, and some cells taper to a sharp point. Reproduction is by polar budding, often on a short pedicel; the cells occur singly, in pairs, chains and clusters. After one month a sediment is present; a thin pellicle or ring occurs. Growth on 5% malt extract agar: After one month at 25''C, the colony is cream-colored, raised, the surface is dull becoming slightly rugoid, and the margin is smooth and entire.

Vic. Descriptions of anamorphic basidiomycetous genera and species

806

Dalmau plate culture on corn meal agar: After one month at 19°C, a primitive pseudomycelium is present. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+ +

-

+ s +

-

+

-

+ + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + +

-

+ +

-

+ + ws s +

-

w/Additional assimilation tests and other growth characteristics:

n 2-Keto-D-gluconate 10% NaCl/5% glucose + 5-Keto-D-gluconate n Starch formation Saccharate Urease + + Gelatin liquefaction D-Glucuronate 50% (w/w) Glucose+ Growth at 2>TC + yeast extract agar Co-Q: 9 (Goto 1979a). Mol% G + C: 54.7 {T^\ Goto 1979a); 52.6 (HPLC: Tokuoka et al. 1987). Cell hydrolyzates: Mannose dominant, hexitol (probably mannitol), pentitol (probably arabinitol), and tetritol (probably erythritol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Sulfited grape must of a Koshu variety grape in Japan, Oct. 1976 (Goto 1979a); sponge cake, Ibaraki Pref., Japan, May 1984 (Tokuoka strain 155-CA). Type strain: CBS 7053 (Goto strain C 96-2). Comments: Our assimilation results agree with the original description except for melezitose assimilation, which Goto (1979a) described as positive. Morphology, assimilation patterns and LSU rDNA sequence analysis indicate that R. dulciaminis is a synonym of R. acuta. These same criteria indicate that R. acuta is a synonym of Sterigmatomyces elviae.

cross section is raised, the texture soft, the margin entire. After one month the color is more intense. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s + + s -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + +

+ + + w + +

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate + Urease 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Growth at 3 0 ^ D-Glucuronate Growth at 3 7 ^ 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Sugiyama et al. 1985). MoI% G + C: 64.6 (7;^: Sugiyama et al. 1985). Cell hydrolyzates: Fucose and mannose dominant; hexitol (probably mannitol) and pentitol (probably arabinitol) present (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Rotting conifer, Araucaria araucana, in Llaima, Chile, in December 1968 (Grinbergs and Yarrow 1970b). Type strain: CBS 6031 (Grinbergs strain number 1922). Comments: Based on nucleotide sequence alignments of a region of the LSU rRNA (Fell et al. 1992), R. araucariae is closely related to Rhodosporidium kratochvilovae.

105.4. Rhodotorula armeniaca Shivas & Rodrigues de Miranda (1983b) Growth in 5% malt extract: After 3 days at 25T, 105.3. Rhodotorula araucariae Grinbergs & Yarrow the cells are ovoid to elongate, measuring (2-6.7) x (49.4) fxm, and occur singly or in pairs. After one month, (1970b) a light sediment is present. Growth in 5% malt extract: After 3 days at 24T, the cells are ovoidal to subglobose, (3.0-6.0)x(3.4-7.4) fim, Growth on 5% malt extract agar: After one month at single or budding. Grinbergs and Yarrow (1970b) report 19°C, the streak colony is orange, dull or semi-glistening, cell lengths to 11 |Lim. After one month there is a ring and and butyrous with undulated margins. moderate sediment; there is no pellicle. Dalmau plate culture on corn meal agar: After one Growth on 5% malt agar: After 3 days at 24T, the week at 19°C, pseudomycelium is not formed. colony is pale yellowish-pink, smooth, and glistening. The Fermentation: absent.

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + s s v -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ w/w/+ s w -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n 5-Keto-D-gluconate n Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Not determined.

Starch formation Urease Gelatin liquefaction Growth at 25''C Growth at SO^'C

+ +

Origin of the strain studied: One strain of this species was isolated in 1981 from the surface of leaves of the bottle brush, Callistemon uiminalis (Soland ex Gaertr.) G. Don ex Loud., growing at Armidale, New South Wales, Australia. Type strain: CBS 8076. Comments: To ensure survival, this strain must be transferred biweekly; otherwise, we recommend storage at -80°C or in the vapor phase of liquid nitrogen. 105.5. Rhodotorula aurantiaca (Saito) Lodder (1934) Synonyms: Torula aurantiaca Saito (1922) Torulopsis aurantiaca (Saito) Ciferri & Redaelli (1925) Chromotorula aurantiaca (Saito) EC. Harrison (1928) Rhodotorula glutinis (Fresenius) EC. Harrison var. aurantiaca (Saito) Hasegawa (1958) Mycotorula colostri Castelli (1932) Rhodotorula colostri (Castelli) Lodder (1934) Rhodotorula crocea Shifrine & Phaff (1956)

Growth in 5% malt extract: After 3 days at 19T, the cells are elongate ovoidal to cylindrical, (3-5) x (613)jjim, occasionally 16|im or longer; in pairs or single, sometimes in short chains; little sediment, but there may be a thin, partial ring. After one month, a thin to welldeveloped orange or red ring and a moderate amount of sediment are present. Growth on 5% malt agar: The cell morphology is similar to that in malt extract, but cells may be

807

slightly longer. The streak culture after one month is reddish-orange, or dark yellow, finely wrinkled or smooth, semiglossy, soft, flat to low convex, with an entire to slightly irregular border. Dalmau plate culture on corn meal agar: Pseudomycelium absent or rudimentary, consisting of short chains of elongate cells. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V + s V V + + V V V -

jV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Urease + 5-Keto-D-gluconate v Gelatin liquefaction Saccharate R\BA-free D-Glucuronate + Thiamine-free 50% (w/w) GlucoseGrowth at 25T + yeast extract agar Growth at SO'^C 10% NaCl/5% glucose Starch formation Co-Q: 10 (Yamada and Kondo 1973). Mol% G + C: 55.4, type strain {T^: von Arx and Weijman 1979); strain R. crocea: 58.8 (T^: Nakase and Komagata 1971c). Cell hydrolyzates: Mannose dominates, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Air in Japan. Type strain: CBS 317, isolated from atmosphere by Saito (1922), was designated as the type strain by Lodder and Kreger-van Rij (1952). Comments: Other strains have been isolated from Japan, Europe, North America, the Antarctic, Atlantic and Indian Oceans. Sources include: clinical (1), unknown (1), bark beetle (1), plants and soils (7), marine waters (10). 105.6. Rhodotorula auriculariae (Nakase) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonyms: Torulopsis auriculariae Nakase (1971a) Candida auriculariae (Nakase) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Growth in glucose-yeast extract-peptone water: After 3 days at 25''C, the cells are spherical to ovoidal.

Vic. Descriptions of anamorphic basidiomycetous genera and species

(3.4-8)x(4.7-11.4)iJim, and occur singly, in pairs or in clusters. A sediment is formed. After one month a ring is present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is creamcolored, mucoid, glistening, moist, convex and entire. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

_ _ + s

_ s

_ _ _ +

_ _ _ _ _

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

w

— _ _ + s

_ +

_

+

_ _

Additional assimilation tests and other growth characteristics: n Starch formation 2-Keto-D-gluconate -

n Urease 5 -Keto-D-gluconate + Saccharate + Gelatin liquefaction D-Glucuronate Growth at 2 5 ^ + Growth at WC 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 54.4 (ri„: Nakase 1971a). Cell hydrolyzates: Fucose, rhamnose, mannose dominant, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Fruiting body of Auricularia auricula-judae, in Zaruga-take (Mt. Zaru), Hamanashi Prefecture, Japan, May 1965 (strain AJ 4404, IFO 1580). Type strain: CBS 6379. 105.7. Rhodotorula bacarum (Buhagiar) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonyms: Torulopsis bacarum Buhagiar (1975) Candida bacarum (Buhagiar) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Growth in 5% malt extract: After 4 days at 25°C, the cells are ovoidal and elongate, (2.5-4)x(5.5-10)(im. After one month a sediment and light ring are present. Growth on 5% malt extract agar: After one month at 25°C, the streak culture is brownish or cream-colored.

smooth, convex, with an entire to slightly undulating margin. Dalmau plate culture on corn meal agar: After one week at 25°C, the pseudomycelium is poorly developed, consisting of ramified chains of ovoid cells. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

V

+ + s +

-

+ +

-

+ + + + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ + s

-

s + + s

-

+ s

-

+ Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Starch formation + n Urease 5 -Keto-D-gluconate Gelatin liquefaction Saccharate Growth at 25T + D-Glucuronate Growth at 30°C 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 52.4 (Tn,: Meyer et al. 1984). Cell hydrolyzates: Mannose low, hexitol (probably mannitol), malic acid (Weijman and Rodrigues; de Miranda 1988).

Origin of the strains studied: Black currants, raspberries (Rubus idaeus cultivar Mailing Jewel) and strawberries (Fragaria ananassa cultivar Cambridge Favourite). Type strain: CBS 6526, isolated from black currants (Ribes nigrum cultivar Baldwin) by Buhagiar (1975). Comments: Other strains have been isolated from dolphin (mammal) skin near the Netherlands by M. Luykx (CBS 7102) and air in Portugal by N. van Uden (CBS 7415). Nucleotide sequence analysis (unpublished) in our laboratory indicates that this species is related to the Ustilaginales. This relationship is also suggested by the low level of mannose in the cell hydrolyzates, which is a characteristic of the smut-like yeasts. 105.8. Rhodotorula bogoriensis (Deinema) von Arx & Weijman (1979) Synonyms: Candida bogoriensis Deinema (1961) Candida bogoriensis Deinema var. lipolytica Ruinen (1963) Vanrija bogoriensis (Deinema) R.T. Moore (1980)

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

809

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal-elongate, (2.05)x(5-17)|im, and occur singly or in pairs. After one month, a thin ring and heavy sediment have formed. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is cream to yellowish-brown, mucoid, soft and smooth.

Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is grayishbrown, glistening, soft and smooth. On potato agar the streak culture is mucoid.

Dalmau plate culture on corn meal agar:

Fermentation: absent.

uiic wcciv av ^j

After

Assimilation:

\^, uicic; a i c uiaiiv^iicu v^iiaiiia

pseudohyphae present. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s

-

+ + +

-

+

-

+ + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ s

-

+

-

+ +

-

s +

-

+/w +/w

+ s growth Additional assimilation tests and other characteristics: 2-Keto-D-gluconate n Starch formation V

Dalmau plate culture on corn meal agar: Pseudomycelium is abundantly formed, consisting of branched chains of elongate cells.

5 -Keto-D-gluconate n Urease + Saccharate w Gelatin liquefaction D-Glucuronate + Thiamine-free 50% (w/w) GlucoseGrowth at 25''C + yeast extract agar Growth at 30T 10% NaCl/5% glucose + Co-Q: 10 (Yamada and Kondo 1972a). Mol% G + C: 57.3, type strain {T^ ,: Meyer and Phaflf 1972). Cell hydrolyzates: Fucose, rhamnose, mannose dominant (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Surface of leaves of the flowering shrub Randia malleifera in Bogor, Indonesia. Type strain: CBS 4101. Comments: The original description reports that growth in ethanol was negative, which differs from our results. 105.9. Rhodotorula huffonii (Ramirez Gomez) Roeijmans, van Eijk & Yarrow (1989) Synonyms: Torulopsis buffonii Ramirez Gomez (1957) Paratorulopsis buffonii (Ramirez Gomez) Novak & Zsolt (1961) Candida buffonii (Ramirez Gomez) van Uden & H.R. Buckley (1970)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are elongate, (2-3.5)x(1022) |im. After one month, a ring, pellicle, and sediment have formed.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

s

-

+ + +

-

+

-

V

s s

_ _ s

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s

-

s s

-

+

-

+ +

-

V

+

_ V V

-

+

_

Additional assimilation tests and other growth characteristics: n Gelatin liquefaction 2-Keto-D-gluconate 5-Keto-D-gluconate n Biotin-free -

Inositol-free Saccharate _ D-Glucuronate + Niacin-free Thiamine-free 50% (w/w) Glucoseyeast extract agar Growth at 25T + 10% NaCl/5% glucose s Growth at 30°C _ Starch formation _ Urease + Co-Q: Not determined. Mol% G + C: 50.8, type strain {T^ : Meyer et al. 1984). Cell hydrolyzates: Xylose absent, fucose and rhamnose present (Roeijmans et al. 1989).

Origin of the strain studied: Carpophore of Boletus edulis var. alba (Ramirez Gomez 1957) (1). Type strain: ATCC 18813. Comments: The type strain of R. buffonii was listed in van Uden and Buckley (1970), Barnett et al. (1983) and Meyer et al. (1984) as CBS 2838. Van Uden and Buckley (1970) and Meyer et al. (1984) depict elongate cells for this strain. In contrast, a photograph of CBS 2838 in Barnett et al. (1983) illustrates ovoid cells. Additionally, Barnett et al. (1983) reported that this strain is diazonium blue B negative, an atypical reaction for a basidiomycete. Barnett et al. (1990) list the type strain as CBS 7150 with elongate cells and a diazonium blue B positive reaction. According to Yarrow (personal communication) CBS 2838 was lost and CBS 7150, a subculture of CBS 2838, was substituted as the type strain. To add to the confusion, there are two strains of CBS 7150 in

810

Vic. Descriptions of anamorphic basidiomycetous genera and species

circulation. One strain is diazonium blue B negative and Assimilation: + A/^-Acetyl-D-glucosamine + the cells are ovoid, similar to the cell photograph of Glucose Methanol s CBS 2838 in Barnett et al. (1983). Based on the diazonium Galactose L-Sorbose s Ethanol + blue B reaction and nucleotide sequence alignment data Sucrose + Glycerol s (Fell et al. 1992), that strain is an ascomycete. The other Maltose Erythritol + + + Ribitol strain is probably an authentic strain of Candida buffonii; Cellobiose Galactitol + the diazonium blue B reaction is positive and the cells Trehalose D-Mannitol + are elongate, similar to those in van Uden and Buckley Lactose + Melibiose D-Glucitol (1970). a-Methyl-D-glucoside Raffinose Because of the questionable identity of the type strain, Melezitose Salicin + s D-Gluconate s we examined strain ATCC 18813, which ATCC lists as Inulin DL-Lactate CBS 2838. We found that ATCC 18813 cells resemble Soluble starch Succinate + V the elongate cell descriptions of Candida buffonii and D-Xylose Citrate s L-Arabinose the diazonium blue B reaction is positive, which clarifies D-Arabinose Inositol its position as a basidiomycete. Therefore, we selected D-Ribose Hexadecane Nitrate + ATCC 18813 to be the type strain, because it appears to L-Rhamnose + Vitamin-free + D-Glucosamine represent the original CBS 2838. The standard description presented here (with the exceptions of the mol% G + C and cell hydrolyzates) is taken from observations and tests on Additional assimilation tests and other growth ATCC 18813. characteristics: 105.10. Rhodotorula diffluens (Ruinen) von Arx & Weijman (1979) Synonyms: Candida diffluens Ruinen (1963) Vanrija diffluens (Ruinen) R.T. Moore (1980)

Growth in glucose-yeast extract-peptone water: After 3 days at 25''C, the cells are subglobose, ovoid, or slightly irregular. (3-5)x(5-ll)|jim. The cells are encapsulated. Growth on glucose-yeast extract-peptone agar: After one month at 25''C, the streak culture is brownish cream-colored, glistening, soft, smooth, and mucoid. Dalmau plate culture on corn meal agar: The pseudomycelium is either primitive, consisting of branched chains of cylindrical cells, or displays long pseudohyphal cells bearing spindle-shaped blastospores (Fig. 411). Fermentation: absent.

Starch formation 2-Keto-D-gluconate n Urease 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Growth at SO^C D-Glucuronate + Growth at 37''C 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Yamada and Kondo 1972a). Mol% G + C: 60.5 {T^: Nakase and Komagata 1971c). Cell hydrolyzates: Fucose, rhamnose, mannose dominate, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Leaf of Tillandsia usneoides (bromeliad) in Dutch Guyana (Ruinen 1963). Type strain: CBS 5233. 105.11. Rhodotorula ferulica Sampaio & van Uden (1991) Growth in 5% malt extract: After 3 days at 19°C, the cells are ovoidal to spherical, encapsulated, measuring (2.7-4.7) X (4.0-6.7) |im, and occur singly or in pairs. Buds may form on a short neck. After one month, there is a light sediment, but no ring or pellicle. Growth on 5% malt extract agar: After one month at 19°C, the streak colony is cream-colored, mucoid, raised, glistening and the margin is entire. Dalmau plate culture on corn meal agar: After one month at 19°C, both true and pseudomycelium are formed. Blastoconidia form laterally on the hyphal cells.

Fig. 411. R. diffluens, CBS 5233. Cells grown on corn meal agar for 5 days at 25''C. Bar = 10 fxm.

Fermentation: absent.

811

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s s + + + + + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + v V + + ws s + + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate Arbutin Cadaverine Creatine Creatinine L-Lysine Ethylamine hydrochloride 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Starch formation Urease Gelatin liquefaction Glucono-6-lactone L-Tartaric acid Malic acid Vanillyl alcohol Veratryl alcohol

+ n + + + v v + v -

+ + + v + +

Vannilic acid Veratric acid Ferulic acid /^-Hydroxybenzoic acid m-Hydroxybenzoic acid Protocatechuic acid /7-Coumaric acid Caffeic acid Cinnamic acid Syringic acid Sinapic acid Gallic acid Salicylic acid Gentistic acid Guaiacol Sodium nitrate 0.01% Cycloheximide 0.1% Cycloheximide Growth at 25''C Growth at 30"C

Co-Q: 10 (Sampaio and van Uden 1991). Mol% G + C: 66.1 ( 7 ^ : Sampaio and van Uden 1991). Cell hydrolyzates: Xylose absent (Sampaio and van Uden 1991).

Origin of the strains studied: Three strains were isolated about one mile upstream from the mouth of the Tagus River, Oeiras, Portugal. The main source of pollution in this river is a tobacco processing plant (Sampaio and van Uden 1991). Type strain: CBS 7416 (IGC 4524). Comments: The original description noted growth at 30°C, which we were not able to confirm. 105.12. Rhodotorula foliorum (Ruinen) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonym: Candida foUarum Ruinen (1963)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are slender, ovoid-elongate

to cylindrical, (1.5-4)x(4-12) jim. They may be single or in pairs and are encapsulated. A ring may be present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is yellowish, glistening, mucoid, smooth and entire. Dalmau plate culture on corn meal agar: The abundant pseudomycelium is primitive, consisting of ramified chains of cylindrical cells. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s + s s V V V s

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Urease 2-Keto-D-gluconate n Gelatin liquefaction 5-Keto-D-gluconate n Biotin-free Saccharate D-Glucuronate + Thiamine-free 50% (w/w) GlucoseGrowth at 25*'C yeast extract agar Growth at 30°C 10% NaCl/5% glucose Starch formation Co-Q: 10 (Sugiyama et al. 1985). Moiy© G + C: 56.0 (T^: G.A. Foot, personal communication, in Barnett et al. 1990). Cell hydrolyzates: Fucose, rhamnose, mannose dominate, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Leaves of Drymoglossum pilloselloides growing epiphytically in the Botanical Garden, Bogor, Indonesia (Ruinen 1963). Type strain: CBS 5234. Comments: The original specific epithet was incorrectly spelled yo//arwm and was changed by Yarrow (Barnett et al. 1983). According to the original description lactose was not assimilated, which differs from our results. 105.13. Rhodotorula fragaria (J.A. Barnett & Buhagiar) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonyms: Torulopsis fragaria J.A. Barnett & Buhagiar (1971) Candida fragariorum (J.A. Barnett & Buhagiar) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

B12

Vic. Descriptions of anamorphic basidiomycetous genera and species

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal or cylindrical. In defined medium with glucose as the sole carbon source, the cells measure (1.8-6.l)x(3.4-12.4) (im. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is beige, smooth, shiny and flat with an entire or slightly irregular edge. Dalmau plate culture on corn meal agar: Short chains of cells are present afl;er one week. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics:

n Starch formation 2-Keto-D-gluconate n Urease 5-Keto-D-gluconate Gelatin liquefaction Saccharate + Growth at 25°C D-Glucuronate Growth at 30T 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol%G + C:56.6(rj„ : G.A, Foot, personal communication, in Bamett et al. 1990). Cell hydrolyzates: Fucose, mannose dominate, hexitol (probably mannitol) and pentitol (probably arabinitol) (Weijman and Rodrigues de Miranda 1988).

105.14. Rhodotorula fujisanensis (Soneda) Johnson & Phaff (1978) Synonyms: Torulopsis fujisanensis Soneda (1959) Candida fujisanensis (Soneda) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Vanrija fujisanensis (Soneda) R.T. Moore (1980)

Growth in glucose-yeast extract-peptone water: After 3 days at 19''C, the cells are long-ovoidal to cylindrical, (2.5-5) x (7-15) [im. A ring and an incomplete pellicle are present. Growth on glucose-yeast extract-peptone agar: After one month at 19°C, the streak culture is grayishyellow, semi-dull, soft, smooth or finely punctate. Dalmau plate culture on corn meal agar: A rudimentary pseudomycelium is formed that consists of ramified chains of ovoid cells. Life cycle: Mixing of cells from strains CBS 6371 and CBS 4551 on potato dextrose agar, followed by incubation at 12-18°C for 18 days can result in the formation of hyphae with clamps (Fig. 412) and teliospores. The teliospores (Fig. 413) are globose, 10-26 jim diameter, to occasionally elongate. The formation of teliospores is inconsistent and attempts to induce germination have been unsuccessfiil. Fermentation: absent. Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + w -

Origin of the strain studied: Strawberries (CBS 6254). Type strain: CBS 6254. Additional assimilation tests and other growth Comments: Thirty-five strains were isolated from fresh characteristics: n Starch formation strawberries and five strains from black currants in the 2-Keto-D-gluconate 5-Keto-D-gluconate n Urease + United Kingdom (Barnett and Buhagiar 1971). Based on Saccharate Gelatin liquefaction standard carbon and nitrogen utilization tests, this species D-Glucuronate Growth at 25°C + resembles R. muscorum. Molecular sequence alignment 50% (w/w) Glucoses Growth at SO'^C data confirms that the two species are closely related (un- yeast extract agar published data, Fell et al.). Taxonomically the two species 10% NaCl/5% glucose + can be separated on the following: R. fragaria assimilates Co-Q: 9 (Goto and Oguri 1983). Mol% G + C: 63.4 {T^\ Goto and Oguri 1983). L-arabinose slowly, R. muscorum does not. R. muscorum Cell hydrolyzates: Fucose, rhamnose, mannose dominate, hexitol assimilates saccharate and slowly assimilates galactitol, (probably mannitol), citric acid (Weijman and Rodrigues de Miranda R. fragaria does not assimilate either compound. 1988).

813

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

Ruguloscolytus rugulosus, M.C. Pignal (1); wild grapes {Vitis coignetiae) mating type Al, CBS 8056, by Goto, Japan; leaves of the California laurel {Umbellularia californica), rotting Opuntia cactus tissue in Australia and fermenting soap berries (Sapindus saponaria) from Hawaii. 105.15. Rhodotorula futronensis (Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989) Synonym: Apiotrichum futronensis Ramirez & Gonzalez (1984d)

Fig. 412. R. fujisanensis, CBS 4551 xCBS 6371. Cells of opposite mating types were mixed on potato dextrose agar and incubated at 12''C. After 8 days, hyphae with clamps and teliospores formed. Bar= 10 |im.

Growth in glucose-yeast extract-peptone water: After 3 days at IS^'C, the cells are ovoidal to elongate, measuring (2-5.4)x(3.4-9.4) |im. The cells reproduce by budding and occur singly, or in clusters. After one month, a ring and a heavy sediment are present. Growth on 5% malt extract agar: After one month at 25°C, the colony is buff colored, flat in cross section, butyrous, the surface is dull, the margin is entire and fringed with pseudomycelium. Dalmau plate culture on corn meal agar: After one month at 19°C, short pseudohyphae are present. Fermentation: absent. Assimilation:

Fig. 413. R. fujisanensis, CBS 4551 xCBS 6371. Cells of opposite mating types were mixed on potato dextrose agar and incubated at 12*'C. Teliospore formed after 8 days. Bar= 10|im.

Origin of the strains studied: Hare feces, Japan (1); leaves, France, by M.R. Bardiz (1). Complementary mating types: CBS 4551, from feces of a hare in Japan, NI 7646, MT Al (Soneda 1959), and CBS 6371, from leaves in France, MT A2. Type strain: CBS 4551. Comments: The species was originally described in the genus Torulopsis. Subsequently, Johnson and Phaff (1978) chemically extracted and characterized carotenoids from this species and transferred the species to Rhodotorula. The formation of sexually produced teliospores demonstrates that R. fujisanensis belongs in a teleomorphic genus. Generic placement and formal description has been delayed due to an inability to induce germination of the teliospores and complete the details of the life cycle. Nucleotide sequence analysis in our laboratory (unpublished) indicates that R. fujisanensis is a member of the Sporidiales with a closer affinity to Leucosporidium than to Rhodosporidium. Several other strains have been isolated: frass of

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+ +

-

+ + s

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ s

-

+ + + +

-

+ +

-

+ w

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate n n Urease 5 -Keto-D-gluconate + Gelatin liquefaction Saccharate Growth at SO^'C + D-Glucuronate Growth at 37T 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: XyLose absent, fucose and rhamnose present (Roeijmans et al. 1989).

Origin of the strain studied: Rotting wood of a laurel, Laurelia sempervirens, in the evergreen rainy Valdivian forest near Futrono, Chile.

814

Vic. Descriptions of anamorphic basidiomycetous genera and species

Type strain: CBS 8163 (IJFM 6008), from rotting wood of Laurelia sempervirens.

convex, and the border is irregular to entire, often with rudimentary pseudomycelium.

Comments: A strain from the intestinal tract of a fly, Scaptomyza multispinosa, collected in Chile by Ramirez and Gonzalez (1984d) was not included in this study.

Dalmau plate culture on corn meal agar: Pseudomycelium is usually absent or rudimentary; in some strains well-developed pseudohyphae or true hyphae with large, dark pigmented teliospores are present, which indicates self-sporulating strains oi Rhodosporidium.

105.16. Rhodotorula glutinis (Fresenius) EC. Harrison (1928) This species has two varieties: Rhodotorula glutinis (Fresenius) F.C. Harrison var. glutinis (1958) Synonyms: Blastodendrion aerius Ciferri & Redaelli (1925) Cryptococcus glutinis Fresenius (1850) Saccharomyces glutinis (Fresenius) Cohn (1872) Torula glutinis (Fresenius) Pringsheim & Bilewsky (1911) Torulopsis glutinis (Fresenius) Dodge (1935) Saccharomyces roseus Engel (1877) Torulopsis roseus Engel (1877) Saccharomyces fresenii Schroeter (1908) Mycotorula rosea-corallina Scaramella (1928) Torula rufula Saito (1922) Torulopsis rufula (Saito) Ciferri & Redaelli (1925) Rhodotorula rufula (Saito) F.C. Harrison (1928) Rhodotorula glutinis (Fresenius) F.C. Harrison var. rufula (Saito) Lodder (1934) Torulopsis bronchialis Ciferri & Redaelli (1925) Rhodotorula bronchialis (Ciferri & Redaelli) Lodder (1934) Cryptococcus bronchialis (Ciferri & Redaelli) Nannizzi (1934) Torulopsis saitoi Ciferri & Redaelli (1925) Rhodotorula glutinis (Fresenius) F.C. Harrison var. saitoi (Ciferri & Redaelli) Lodder (1934) Torula miniata Okunuki (1931) Torula suganii Okunuki (1931) Torulopsis minuta (Saito) Ciferri & Redaelli var. americana Ciferri (1931a) Rhodotorula suganii (Okunuki) Lodder (1934) Rhodotorula glutinis (Fresenius) F.C. Harrison var. lusitanica Marcilla, Feduchy & Gomes (1945) Rhodotorula terrea Sugiyama & S. Goto (1969)

Rhodotorula glutinis var, dairenensis Hasegawa & Banno (1958) Synonyms: Torula rubra Schimon (1911) Torula rubra Schimon var. a Saito (1922)

Fermentation: absent. Assimilation of carbon compounds: Glucose Galactose L-Sofbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V

+ + V

+

V

+

-

V V V V V

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V V

V V V V V

+/w + V

+ V

-

+ + V

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate v Urease 5-Keto-D-gluconate Gelatin liquefaction Saccharate Thiamine-free D-Glucuronate Growth at 37"C 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose w Co-Q: 10 (Nakase and Komagata 1971a). Mol% G + C: 60.0-61.2; 66.8-67.8 {T^ Nakase and Komagata 1971a). Cell hydrolyzates: Fucose, mannose dominate, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to globose, (2.3-5.0)x(4.0-10)(im, or more elongate, (12-16 jJim), and wider (7 |Jim). There is usually a thin ring and a light sediment. After one month a medium to heavy, pink to orange or salmon-colored ring and a heavy sediment are present.

Supplementary description of R. glutinis var. dairenensis: The variety is similar to R. glutinis var. glutinis except that nitrate is assimilated weakly, 2-ketoD-gluconate is not assimilated and thiamine is required for growth. The nucleotide sequence analysis indicates that the variety dairenensis has a closer phylogenetic relationship to R. mucilaginosa (Fell et al. 1992) than to the variety glutinis.

Growth on 5% malt agar: After one month at 25''C, the cell morphology is similar to that in malt extract, except that the cells may be longer. The streak culture is coral-red to salmon or slightly orange. The surface varies from smooth, often with fine transverse striations, to wrinkled; the appearance is from highly glossy to semiglossy. The texture varies from mucoid to pasty to slightly tough. The cross section is flat to broad

Origin of the strains belonging to the variety glutinis: 370 strains from Japan, Sweden, U.S.A., Kenya, Germany, Spain, Canada, and the Atlantic, Indian and Antarctic Oceans. Sources included: air (6), human patient (1), wood pulp (20), brewery water (1), plant leaves (2), boric acid (1), brined pickles (1), olive brine (2), textiles (1), flowers (6), tree slime fluxes (4), marine (316), oil drillings (1), lake trout intestine (1),

815

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

brine shrimp (2), polluted water, sputum, unknown sources (4). Type strain: CBS 20, isolated by Pringsheim (Berlin) from the atmosphere and sent to CBS around the year 1912. Origin of the strain belonging to the variety dairenensis: The strain (CBS 4406) was isolated from the atmosphere by Saito (1922). Type strain: CBS 4406.

Dalmau plate culture on corn meal agar: Pseudomycelium is absent or rudimentary for some strains, consisting of chains of elongate cells, while other strains have a well-developed, branched pseudomycelium growing into the agar. Fermentation: absent. AssimilationI of carbon compounds: Glucose

+

iV-Acetyl-D-glucosamine

-

+ Methanol Comments: R. glutinis var. glutinis, the type species Galactose Ethanol V V of the genus, is world-wide in distribution, has been L-Sorbose + Glycerol V isolated from a wide variety of substrates and is probably Sucrose V Maltose Erythritol the most prevalent species in the genus. Although some Cellobiose V V Ribitol strains grow at 37°C, the species is not considered to Trehalose + V Galactitol be a human pathogen; it has been reported from skin Lactose V D-Mannitol V D-Glucitol diseases of chickens (Kwon-Chung and Bennett 1992). As Melibiose + a-Methyl-D-glucoside V indicated by the variability in taxonomic characteristics Raflfinose V Melezitose Salicin and the range of mol% G + C values, the species is Inulin D-Gluconate + polytypic, consisting of several sexually isolated species. Soluble starch DL-Lactate To date, five species of Rhodosporidium (R. babjeuae, D-Xylose +/w Succinate + V Citrate w/R. diobouatum, R. kratochvilovae, R. sphaerocarpum L-Arabinose Inositol V and R. toruloides) have been described with phenotypic D-Arabinose V Hexadecane characteristics that would classify their anamorphic states D-Ribose + L-Rhamnose V Nitrate as Rhodotorula glutinis. However, the type strain of D-Glucosamine + Vitamin-free R. glutinis does not mate with any of the sexual species. Based on our unpublished nucleotide sequence analyses of Additional assimilation tests and other growth a partial region of the LSU rDNA, R. glutinis var. glutinis characteristics: is a genetically distinct species that is more closely related 2-Keto-D-gluconate Starch formation + Urease to Rhodosporidium babjeuae and R. diobouatum than the 5-Keto-D-gluconate Gelatin liquefaction + other three teleomorphic species. There is also a close Saccharate Growth at 30"C D-Glucuronate relationship of R. glutinis var. glutinis and R. graminis 50% (w/w) GlucoseGrowth at 1>TC (see R. graminis discussion). The variety dairenensis yeast extract agar is more closely related to R. mucilaginosa than to the 10% NaCl/5% glucose + variety glutinis, consequently the variety dairenensis will Co-Q: 10 (Yamada and Kondo 1973). probably be elevated to the rank of species when our study Mol% G + C: 67.0 {T^\ Sugiyama et al. 1985); 70.0 (BD: Storck et al. of the molecular systematics of the genus Rhodotorula is 1969). Cell hydrolyzates: Fucose (trace), mannose dominate, hexitol (probably completed. mannitol) (Weijman and Rodrigues de Miranda 1988).

105.17. Rhodotorula graminis di Menna (1958a)

Synonyms: Pichia rosa Nishiwaki (1910) Rhodotorula rosa (Nishiwaki) S. Goto & Yokotsuka (1962a)

Growth in 5% malt extract: After 3 days at 25°C, the cells are globose to ovoidal or elongate, (2.5-7) x (415) [xm, often having oil droplet inclusions and may occur singly, in pairs or in short chains or clusters. A thin ring and a light sediment are present. After one month a moderate to heavy pink ring, usually a heavy sediment, and occasionally moist islets may be present. Growth on 5% malt agar: The cell morphology is similar to that in malt extract. After one month at 25''C, the streak culture is coral-red, the surface is smooth or rugose to corrugated and glossy; the texture is soft, occasionally mucoid, the cross section is flat to low convex and the margin is irregular with some rudimentary pseudomycelium.

Origin of the strains studied: 67 strains from New Zealand, Indonesia, North America, Japan, the Indian and Atlantic Oceans. Sources included: plants (6), marine waters (59), unknown (1), soil (1). Type strain: CBS 2826 (di Menna strain 2K53), from pasture grass on the North Island of New Zealand (di Menna 1958a). Comments: Di Menna (1958a) made her original isolations during summer collections on North Island, New Zealand, from the leaf surfaces of pasture grasses {Lolium perenne, Anthoxanthum odoratum and Agrostis tenuis). R. graminis appears to be closely related to R. glutinis; Kurtzman and Fell (1991) reported 30% nDNA relatedness between the two species. Fell et al. (1992), in a study of the nucleotide sequence alignments of a partial region of the LSU rRNA, found that the two species differed by one base position.

Vic. Descriptions of anamorphic basidiomycetous genera and species

816

105.18. Rhodotorula hinnulea (Shivas 4& Rodrigues ribose were weak, in contrast to our results. The low de Miranda) Rodrigues de Miranda & amount of mannose in the cell hydrolyzates and nucleotide Weijman (Weijman et al. 1988) sequence analysis in our laboratory demonstrates that Synonym: R. hinnulea is related to the yeastlike smut fungi. Cryptococcus hinnuleus Shivas & Rodrigues de Miranda (1983a)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal and measure (1.4-4.7) x(2.7-5.4) jim. They reproduce by budding and occur singly and in pairs. After one month, a thin ring and a little sediment are present. Growth on 5% malt extract agar: After one month at 25°C, the streak colony is cream to buff-colored, flat in cross section, with a smooth, dull surface, pasty texture and a margin that is entire. Dalmau plate culture on corn meal agar: After one month at 19°C, pseudomycelium and true mycelium are absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

_ + + + +

-

+ +

-

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

V

+ +

-

+ + s

-

w w +

+ + Additional assimilation tests and other growth characteristics: n Starch formation 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose

n

-

Urease Gelatin liquefaction Growth at 25*'C Growth at WC

+

-

+

-

-

Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Mannose low (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: The surface of leaves of the honeysuckle, Banksia collina R. Br., growing at Armidale, New South Wales, Australia. Collections were made in 1981 (Shivas and Rodrigues de Miranda 1983a). Type strain: CBS 8079. Comments: This species and R. phylloplana are the only members of the genus that utilize inositol as a sole source of carbon. In the original description, the assimilation of a-methyl-D-glucoside was negative, soluble starch and

105.19. Rhodotorula hordea Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonym: Candida graminis Rodrigues de Miranda & Diem (1974)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ellipsoidal and elongate, (2.7-4.7)x(6-12)|im, and occur singly or in pairs. A ring and a sediment are present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is beige, smooth, creamy to slightly mucoid with an entire margin. Dalmau plate culture on corn meal agar: Pseudomycelium is sparse and consists of branched chains of elongated cells. Fermentation: absent. Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ s + + + + + s

5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose

n

-

+

V V

V

s

A/'-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ + +

-

+ + V

+

-

+ + +

-

+

+ Additional assimilation tests and other growth characteristics: n Starch formation 2-Keto-D-gluconate -

-

+

-

Urease Gelatin liquefaction Growth at 25*'C Growth at 30°C

+

-

+

-

-

Co-Q: Not determined. Mor/o G + C: 46.9 (Bamett et al. 1990). Cell hydrolyzates: Fucose, mannose dominates (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Barley (Hordei hexastichi L.) leaves from an unspecified locale (Rodrigues de Miranda and Diem 1974). Type strain: CBS 6403. Comments: Since the specific epithet Rhodotorula graminis was in use, the name Rhodotorula hordea was

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

chosen to replace Candida 1988).

graminis

(Weijman et al.

105.20. Rhodotorula hylophila (van der Walt, v a n der Klift & D . B . Scott) Rodrigues de M i r a n d a & Weijman (Weijman et al. 1988) Synonym: Candida hylophila van der Walt, van der Klift & D.B. Scott (1971a)

Growth in glucose-yeast extract-peptone water: After 3 days at 25''C, the cells are spheroidal, ovoidal, ellipsoidal or cylindrical, ( 1 . 0 - 3 . 0 ) x ( l . 5 - 9 . 0 ) | i m , occasionally triangular or irregular, and occur singly, in pairs, short chains and small clusters. Pseudomycelium is present. After one month a granular to floccose sediment, islets and an incomplete ring are present. Growth o n glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is brownishcream, moist, raised, lacy, with a fringed margin. D a l m a u plate culture on corn meal agar: The pseudomycelium consists of long slender pseudohyphae often curved and bearing few blastoconidia which are often triangular, and occur in clusters or short chains. Fermentation: absent. +

V

V

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ +

s s

-

ws +

-

Additional assimilation tests a n d other growth characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose

n n

-

+

-

Xyleborus aemulus Woll. in a deciduous tree, Rapanea melanophloeos (L.) Mez., growing near Knysna, Cape Province in South Africa (van der Walt et al. 1971a). Type strain: CBS 6226. 105.21. Rhodotorula ingeniosa & Weijman (1979)

(di M e n n a ) von A r x

Synonyms: Torulopsis ingeniosa di Menna (1958b) Candida ingeniosa (di Menna) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Vanrija ingeniosa (di Menna) R.T. Moore (1980)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal to cylindrical, single or in pairs and measure (2-3.5)x(3.5-8) [im. A thin capsule may be present. After one month, a ring is present. Growth o n glucose-yeast extract-peptone agar: After one month at 25''C, the streak culture is yellowish, mucoid, glistening, soft and smooth. D a l m a u plate culture o n corn meal agar: domycelium is absent.

Pseu-

Fermentation: absent. Assimilation of carbon c o m p o u n d s :

Assimilation of carbon c o m p o u n d s : Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

817

Starch formation Urease Gelatin liquefaction Growth at SOT Growth at 3 7 T

-

+

-

+

-

-

Co-Q: Not determined. Mor/o G + C: 48.3 (Barnett et al. 1990). Cell hydrolyzates: Fucose and mannose dominate; pentitol (probably arabinitol), tetritol (probably erythiritol) are also present (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: One strain was isolated from material from the tunnels of the beetle

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w s + + + + +

-

+ +

-

+ s

s

-

+

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+

-

+ + + + s w w ws

-

+ + +

Additional assimilation tests a n d other g;rov^ characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucose-

n n

-

+

-

Starch formation Urease Gelatin liquefaction Growth at WC Growth at 37°C

-

+

-

+

V

yeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Yamada and Kondo 1972a). Mol% G + C: 55.6, type strain {T^\ Nakase and Komagata 1971c). Cell hydrolyzates: Fucose, mannose dominate, hexitol (probably mannitol), pentitol (arabinitol) malic acid (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Pasture grass leaves and in lesser frequencies from the soil beneath the grass near Hamilton, N e w Zealand, isolated by di Menna (1958b).

Vic. Descriptions of anamorphic basidiomycetous genera and species

Type strain: CBS 4240, di Menna strain TG27, collected in July 1957.

There is a thin incomplete ring and a light sediment. Growth is slow. After one month, there is a thin to moderate ring and a moderate sediment.

105.22. Rhodotorula javanica (Ruinen) von Arx & Weijman (1979)

Growth on 5% malt agar: Cells in young cultures are larger than those grown in liquid malt extract. After one month at 20°C, the streak culture is pink, smooth, highly glossy, soft but not slimy, convex and shows little spreading; the margin is entire.

Synonym: Candida javanica Ruinen (1963)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are long-ovoidal to spindleshaped, (1.5-3) X (7-24) ^m. The cells are encapsulated; a thin ring may be present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is yellowish, glistening, slightly mucoid, soft and almost smooth. Dalmau plate culture on corn meal agar: The pseudomycelium consists of branched chains of spindleshaped cells in a tree-like arrangement. Fermentation: absent. Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

Dalmau plate culture on corn meal agar: domycelium is absent.

Pseu-

Fermentation: absent. Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + + s + + +

-

+ + s

-

+

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s

-

s +

-

s

-

+ + ws + + ws + s

-

+

-

Additional assimilation tests and other g;ro\^ characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract ag{ir

growth

Starch formation 2-Keto-D-gluconate n Urease 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Thiamine-free D-Glucuronate + Growth at 2 5 T 50% (w/w) GlucoseGrowth at SO^C yeast extract agar 10% NaCl/5% glucose s Co-Q: 9 (Sugiyama et al. 1985). Mol% G + C: 59.0 {T^\ Stenderup et al. 1972). Cell hydrolyzates: Fucose, rhamnose, mannose dominant; hexitol (probably mannitol) (von Arx and Weijman 1979).

Origin of the strain studied: Leaf of the flame flower, Ixora coccinea, growing in Botanical Garden, Java (Ruinen 1963). Type strain: CBS 5236. 105.23. Rhodotorula lactosa Hasegawa (1959) Growth in 5% malt extract: After 5 days at 2 0 T , the cells are single or in pairs, and short-ovoidal to longovoidal, (2.5-4.0)X(4.5-8.0) |im, or longer, (11-12.5) |im.

+ +

-

+

-

Urease Gelatin liquefaction PABA-free Thiamine-free Growth at SO^'C Growth at 2>TC

+

-

w/+

-

10% NaCl/5% glucose Starch formation Co-Q: 9 (Yamada and Kondo 1973). Mol% G + C: 57.3, 57.6 {T^: Nakase and Komagata 1971d). Cell hydrolyzates: Mannose dominates, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: From air, isolated by Mikata (2). Type strain: CBS 5826 (IFO 1423). According to the IFO catalog this strain was collected from air by R. Mikata and designated R-13-30. Apparently the original type strain (RT-82) collected by Hasegawa, from air in a cow shed or dairy, was lost (Phaff and Ahearn 1970). 105.24. Rhodotorula lignophila (Dill, Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989) Synonym: Candida lignophila Dill, Ramirez & Gonzalez (1984)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal, measuring (2.7-5) x (4-10)^m, and may be single, in pairs or short chains or clusters.

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

A few elongate cells may occur (up to 30 |im). Cells are encapsulated. After one month, a sediment is present. Growth on 5% malt extract agar: After one month at 25''C, the streak colony is white, the texture is butyrous, the cross section is flat, surface is dull and the margin is entire. At 19°C, the streak colony is cream-colored, mucoid and glistening. Dalmau plate culture on corn meal agar: After one week at 19°C, pseudomycelium is absent (Fig. 414).

819

Origin of the strains studied: From trunks of the woody plant, Drimys winteri, that were in advanced stages of white rot decay (palo podrido) on the isle of Chiloe in South Chile. The habitat has a constant low temperature (annual mean temperature of 10-12°C) and high humidity (annual mean rainfall 2000-3000 mm) (Dill et al. 1984). Type strain: CBS 7109 (Dill et al. 1984, strain S7/20). 105.25. Rhodotorula marina Phaff, Mrak & Williams (1952) Growth in 5% malt extract: After 3 days at 25°C, the cells are single or in pairs and ovoidal to globose, (24)x(4.0-10.1)^m. A thin ring begins to form. Growth on 5% malt extract agar: After one month at 25°C, the streak colony is orange-pink, glistening, smooth. The texture is pasty to soft. The cross-section is convex, the border entire. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent. Assimilation:

Fig. 4\4. R. lignophila, CBS 7109. Cells grown on corn meal agar after 5 days at 25''C. Bar= 15 ^im.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s + + + + + s w s -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Starch formation 5-Keto-D-gluconate n Urease + Saccharate s Gelatin liquefaction D-Glucuronate + Growth at 25°C + 50% (w/w) Glucoses Growth at WC yeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Xylose, absent; fucose and rhamnose, present (Roeijmans et al. 1989).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + w + V + s V w + w + + + w + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

ws + + + ws w ws w

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Urease + 5-Keto-D-gluconate Gelatin liquefaction Saccharate PABA-free D-Glucuronate + Thiamine-free 50% (w/w) GlucoseGrowth at 25T + yeast extract agar Growth at SO^C 10% NaCl/5% glucose Starch formation Co-Q: 10 (Sugiyama et al. 1985). Mol% G + C: 53.9 {T^: Sugiyama et al. 1985). Cell hydrolyzates: Mannose dominant, hexitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Surface washings of shrimp in Aransas Bay near Rockport, Texas, January 1950 (Phaff etal. 1952). Type strain: CBS 2365 (strain 48-23P of Phaff et al. 1952).

820

Vic. Descriptions of anamorphic basidiomycetous genera and species

Comments: Based on standard taxonomic tests, this Assimilation of carbon compounds: + A/^-Acetyl-D-glucosamine + species was considered to be a synonym of R. minuta Glucose v Methanol (Fell et al. 1984b, Barnett et al. 1990). However, Galactose L-Sorbose v Ethanol v nucleotide sequence analysis of a region of the LSU rRNA Sucrose + Glycerol + demonstrated that the two species are distinct, differing Maltose Erythritol by 53 base positions (Fell et al. 1992). Therefore, we Cellobiose v Ribitol v + Galactitol reestablished R. marina as a separate species. R. marina Trehalose v D-Mannitol v differs from R. minuta on the following: R. marina Lactose Melibiose D-Glucitol v assimilates L-rhamnose, galactitol and citrate and does not Raffinose a-Methyl-D-glucoside utilize either 7V-acetyl-D-glucosamine, 2-keto-D-gluconate Melezitose + Salicin v D-Gluconate + or 5-keto-D-gluconate as sole sources of carbon. Based Inulin DL-Lactate v on standard taxonomic tests, R. marina is difficult to Soluble starch D-Xylose + Succinate + distinguish from R. mucilaginosa; results of testing for L-Arabinose + Citrate growth at 30''C are positive for R. mucilaginosa, negative D-Arabinose s Inositol for R. marina. Based on nucleotide sequence analysis, D-Ribose v Hexadecane Nitrate R. marina and R. mucilaginosa are distinct species (Fell L-Rhamnose Vitamin-free et al. 1992). Mol% G + C differs for the two species D-Glucosamine (R. marina, 54; R. mucilaginosa, 59-63). We listed growth Additional assimilation tests and other growth on maltose and lactose as variable, which is based on the characteristics: + Urease + report of Phaff and Aheam (1970) that the assimilation 2-Keto-D-gluconate + Gelatin liquefaction of those carbon compounds occurs after adaptation and 5-Keto-D-gluconate Saccharate PABA-free is unstable; also, they listed D-arabinose as positive but D-Glucuronate + Thiamine-free latent. 50% (w/w) GlucoseGrowth at SOT v 105.26. Rhodotorula minuta (Saito) EC. Harrison (1928) Synonyms: Torula minuta Saito (1922) Torulopsis minuta (Saito) Ciferri & Redaelli (1925) Mycotorula muris Ciferri & Redaelli (1925) Proteomyces muris (Ciferri & Redaelli) Dodge (1935) Rhodotorula texensis PhafiF, Mrak & Williams var. minuta (Saito) Hasegawa, Banno & Yamauchi (1960) Rhodotorula pallida Lodder (1934) Rhodotorula texensis Phaff, Mrak & Williams (1952) Rhodotorula minuta (Saito) EC. Harrison var. texensis (Phaff, Mrak & Williams) Phaff & Ahearn (1970) Rhodotorula tokyoensis Kobayashi (1953) Rhodotorula laryngis Reiersol (1955) Rhodotorula slooffiae Novak & Voros-Felkai (1962) Rhodotorula zsoltii Galgoczy & Novak (1965)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal, globose or elongate, (2.3-4.5)x(3.56.5) [im, single and in pairs. There is a thin, pink ring and a little sediment. After one month, a moderate orange to red ring and a light sediment are present. Growth on 5% malt agar: The cell morphology is similar to that in malt extract. After one month at 25°C, the streak culture is pink, smooth, glossy, soft but not mucoid, the cross section is flat to low convex and the margin entire. Dalmau plate culture on corn meal agar: Pseudomycelium is absent. Fermentation: absent.

yeast extract agar Growth at ST^C v 10% NaCl/5% glucose Starch formation Co-Q: 10 (Hamamoto et al. 1987). Mor/o G + C: 51.0-54.0 (BD: Storck et al. 1969; T^: Nakase and Komagata 1971c); 48.2-50.1 {T^: Hamamoto et al. 1987). Cell hydrolyzates: Mannose dominant, hexitol (probably mannitol), pentitol (probably arabinitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: 151 strains from Japan, Europe, North America, New Zealand, Antarctica. Sources include: air (1), clinical (23), terrestrial plants and animals (8), marine water, plants and animals (115), pickles (1), fresh water (1), unknown sources (3). Type strain: CBS 319, isolated by Saito from the atmosphere in Tokyo. Comments: This species is prevalent and has a widespread occurrence on a variety of substrates. However, the physiological variability as expressed in the standard tests and the differences in mol% G + C values, suggest that strains identified as R. minuta may represent a diversity of species. This observation should be tested by nucleotide sequence analysis. 105.27. Rhodotorula mucilaginosa (Jorgensen) EC. Harrison (1928) Synonyms: Saccharomyces ruber Demme (1889) Cryptococcus ruber (Demme) Vuillemin (1901) Torulopsis rubra (Demme) de Almeida (1933) Rhodotorula rubra (Demme) Lodder (1934) Rhodotorula rubra (Demme) Lodder var. longa Lodder (1934) Rhodotorula rubra (Demme) Lodder var. curvata Lodder (1934) Torula mucilaginosa Jorgensen (1909) Torulopsis mucilaginosa (Jorgensen) Ciferri & Redaelli (1925) Saccharomyces glutinis Carbone (Dodge 1935)

821

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman Torula sanguinea Schimon (1911) Torulopsis sanguinea (Schimon) Ciferri & Redaelli (1925) Rhodotorula sanguinea (Schimon) EC. Harrison (1928) Rhodotorula mucilaginosa (Jorgensen) EC. Harrison var. sanguinea (Schimon) Lodder (1934) Rhodotorula rubella EC. Harrison (1928) Cryptococcus ludwigi Anderson (1918) Rhodotorula ludwigii (Anderson) Krasil'nikov (1954b) Torula corallina Saito (1922) Torulopsis corallina (Saito) Ciferri & Redaelli (1925) Rhodotorula corallina (Saito) EC. Harrison (1927) Cryptococcus mena Fontoynont & Boucher (1923) Torulopsis mena (Fontoynont & Boucher) Dodge (1935) Blastodendrion carbonei Ciferri & Redaelli (1925) Rhodotorula mucilaginosa (Jorgensen) EC. Harrison var. carbonei Lodder (1934) Torulopsis mucilaginosa (Jorgensen) Ciferri & Redaelli var. carbonei (Ciferri & Redaelli) Dodge (1935) Eutorulopsis dubia Ciferri & Redaelli (1925) Mycotorula pulmonalis Ciferri & RedaelU (1925) Geotrichum pulmonale (Ciferri & Redaelli) Dodge (1935) Torulopsis sanniei Ciferri & Redaelli (1925) Cryptococcus sanniei (Ciferri & Redaelli) Nannizzi (1934) Rhodotorula sanniei (Ciferri & Redaelli) Lodder (1934) Torulopsis biourgei Ciferri & Redaelli (1925) Rhodotorula biourgei (Ciferri & Redaelli) Krasil'nikov (1954b) Blastodendrion simplex Ciferri & Redaelli (1925) Cryptococcus simplex (Ciferri & Redaelli) Nannizzi (1934) Cryptococcus rubrorugosus Castellani (1927) Cryptococcus pararoseus Castellani (1927) Rhodotorula mucilaginosa (Jorgensen) EC. Harrison var. pararosea (Castellani) Lodder (1934) Torulopsis mucilaginosa (Jorgensen) Ciferri & Redaelli var. pararosea (Lodder) Dodge (1935) Torula aclotiana EC. Harrison (1928) Rhodotorula aclotiana EC. Harrison (1928) Cryptococcus corallinus Sartory, Sartory, Hufschmitt & J. Meyer (1930) Sporobolomyces alborubescens Derx (1930) Sporobolomyces photographus Ciferri & Redaelli var. alborubescens (Derx) Verona & Ciferri (1938) Torulopsis nitritophila Ciferri & Ashford (Ashford and Ciferri 1930) Cryptococcus radiatus A. & R. Sartory & J. Meyer (1931) Torula decolans Okunuki (1931) Torulopsis mannitica Castelli (1932) Torulopsis aurantia Zach (Wolfram and Zach 1934b) Rhodotorula mucilaginosa (Jorgensen) EC. Harrison var. plicata Lodder (1934) Torulopsis mucilaginosa (Jorgensen) Ciferri & Redaelli var. plicata (Lodder) Dodge (1935) Rhodotorula matritense Ramirez, Gonzalez & Gutierrez (1981) Rhodotorula mucilaginosa (Jorgensen) EC. Harrison var. kentuckyi Giovannozzi (1948) Rhodotorula pilimanae Hedrick & Burke (1951) Rhodotorula vuilleminii Saez (1967) Rhodotorula ulzamae Moriyon & Ramirez (1974) Rhodotorula rubra (Demme) Lodder var. marina Kawano, Kojima, Ohosawa Rhodotorula Mycotorula Mycotorula

& Morinaga (1976) grinbergsii Ramirez & Gonzalez (1984b) cisnerosi nom. nud. (cf. Fell et al. 1984b) germanica nom. nud. (cf Fell et al. 1984b)

Growth in 5% malt extract: After 3 days at 25T, the cells are ovoidal to spherical, measuring (2-8) x 212)|im; reproduction is by multilateral budding and cells may occur singly, in pairs, in short chains or small clusters. There may be a light strawberry-pink ring and a light to

moderate sediment. After one month, there may be islets and a light to heavy ring that is pink to salmon-colored with a moderate to heavy sediment. Growth on 5% malt extract agar: After one month at 25°C, the streak colony color varies from saffronorange, pink-salmon to deep coral. The cross section is flat, the surface varies from smooth to rugoid, and dull to glistening. The margin is entire. Dalmau plate culture on corn meal agar: After one month at 19°C, pseudomycelium is absent or rudimentary, consisting of chains of elongate cells. Fermentation: absent. Assimilation: + A^-Acetyl-D-glucosamine Glucose V Galactose Methanol -

L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Additional assi characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose

V

+ V V

+

-

+ V

-

+

V V V V V

Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

V V

V V V V V V

+ V

+ V

V

atioi1 tests and other g[ro^ _ V

-

Starch formation Urease Gelatin liquefaction Thiamine-free Growth at 37°C

_ +

-

+

v

Co-Q: 10 (Hamamoto et al. 1987). Mol% G + C: 59.0-59.7 {T^: Hamamoto et al. 1987); 60-63.5 {T^: Nakase and Komagata 1968a, 1971c, Marmur and Doty 1962). Cell hydrolyzates: Fucose, mannose dominant, hexitol (probably mannitol), pentitol (probably arabinitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Powdered red pepper, Capsicum frutescens, Spain (1); larvae of fruit fly (Drosophila pilimanae), Hawaii (1); rotten Eucryphia cordifolia, Chile (1); smut infected leaves in southern France (1). Of the 32 strains studied for the original description of R. mucilaginosa, 10 were isolated from humans, pasteurized beer, air in Tokyo and Italy. Type strain: CBS 316. This strain was supplied to CBS in 1934 by the National Collection of Type Cultures in London, which obtained it from Bierberg (Germany) in 1912 as the type strain of 7?. mucilaginosa (Lodder 1970). Comments: Rhodotorula mucilaginosa has a world-wide distribution in terrestrial, aquatic and marine habitats,

822

Vic. Descriptions of anamorphic basidiomycetous genera and species

from a wide variety of substrates. The species is frequently isolated from human sources, and R. mucilaginosa is possibly the only species of Rhodotorula that causes human infections (Kwon-Chung and Bennett 1992). Sexual cycles in R. mucilaginosa have not been reported. We tested a large number of strains from marine environments for mating responses and we did not observe any positive results. In the last two editions of "The Yeasts", R. mucilaginosa was included as a synonym of R. rubra. According to Barnett et al. (1990), the epithet R. mucilaginosa has priority and the reason is as follows: Demme (1889) described Saccharomyces ruber based on CBS 17. Vuillemin (1901) transferred the species to Cryptococcus, then Lodder (1934) created the combination Rhodotorula rubra. In the meantime, Saito (1923) described Torulopsis rubra based on CBS 2366, a species that Harrison (1928) transferred to Rhodotorula as R. rubra (Saito) Harrison. CBS 2366, however, was found to be a strain of Rhodotorula glutinis (Barnett et al. 1990) and it is taxonomically distinct from CBS 17 {Rhodotorula rubra Lodder). Because R. rubra (Saito) Harrison was the first usage of that species epithet in the genus, the name is no longer available. Hence, R. rubra Lodder cannot be used. Because CBS 17 and the type strain of R. mucilaginosa (CBS 316) are taxonomically identical (Barnett et al. 1990, Fell et al. 1992), the nomenclature, R. mucilaginosa, is correct. R. mucilaginosa has a long list of synonyms, which is due to the variability among strains in the utilization of the majority of the test carbon compounds. Some of this strain variability could signify separate species, a possibility that should be examined by nucleotide sequence analysis. Our examination (Fell et al. 1992) of a region of the LSU rRNA from the type strains of Sporobolomyces alborubescens, R. grinbergsii, R. rubra, R. pilimanae, R. matritensis and R. mucilaginosa demonstrated identical sequence alignments, which indicates synonymous species among these taxa. Our inclusion of S. alborubescens is at variance with Boekhout's (1991a) retention of that species in Sporobolomyces. The only report of ballistoconidia in S. alborubescens is found in the original description. Our attempts to induce ballistoconidia have not been successful with that strain or other strains of R. mucilaginosa. Barnett et al. (1990) reported variable reactions in nitrate assimilation. The positive reactions were attributed to a report by Hamamoto et al. (1987) who found high (66-82%) relative binding of DNA between three strains (YK 114, 115, 116) of R. glutinis and the type strain R. rubra, but not between the type strains of the two species. Our inspection of their data suggested that the three YK strains belong to R. rubra rather than R. glutinis. Hamamoto et al. did not present the nitrate assimilation data for their test strains, however, two of the strains (YK 115 and 116) demonstrated low (33-34)% relative binding with the type strain of R. glutinis. The third

strain YK 114, which was tested against YK 115, resulted in 99% binding. Because we have not observed nitrateassimilating strains of R. mucilaginosa and because we find that strains of the two species are significantly different in nucleotide sequence alignments (Fell et al. 1992), nitrate-assimilating strains are not included in the species description. 105.28. Rhodotorula muscorum (di Menna) von Arx & Weijman (1979) Synonyms: Candida muscorum di Menna (1958a) Azymocandida muscorum (di Menna) Novak & Zsolt (1961)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal to irregularly elongate, (2-3) x (5-10.7) jim. After one month, a ring and heavy sediment are present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is yellowish cream-colored, semi-glistening, mucoid, soft, and smooth; warty outgrowths may be present. Dalmau plate culture on corn meal agar: After 7 days at 19''C, pseudomycelium, consisting of ramified chains of cells bearing few blastoconidia, is present. Fermentation: absent.

Assimilation of carbon c ompounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + s

-

+ +

-

+

s s

-

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

s s + + + + +

-

+ +

-

+ s

Additional assimilation tests and other growth characteristics:

Starch formation 2-Keto-D-gluconate n 5-Keto-D-gluconate n + Urease Gelatin liquefaction Saccharate + D-Glucuronate + Thiamine-free 50% (w/w) GlucoseGrowth at 25°C + yeast extract agar Growth at WC 10% NaCl/5% glucose + Co-Q: 10 (Sugiyama et a1. 1985). Mol% G + C: Not determined. Cell hydrolyzates: Fucose and mannose are dominant; hexitol[ (probably mannitol) and pentitol (probably arabinitol) are present as well (Weijman and Rodrigues de Miranda 1988). According to Sugiyama et al. (1985), xylose is present.

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

Origin of the strains studied: Rotting layer of sphagnum overlying a peat bog at Paraparaumu in the Wellington district, New Zealand and forest soils from Chatham Island, 700 miles east of New Zealand (di Menna 1958a) (1); barley leaf (1). Type strain: CBS 6921. Meyer et al. (1984) reported that the type strain, CBS 2912 (di Menna strain PS2) no longer agreed with the description and was replaced with CBS 6921. Both cultures were derived from the di Menna strains. Comments: Based on standard carbon and nitrogen utilization tests, this species resembles R. fragaria. The two species are distinct and can be separated taxonomically by the following: R. muscorum assimilates saccharate and slowly assimilates galactitol; R. fragaria does not assimilate either compound. R. muscorum does not assimilate L-arabinose, R. fragaria assimilates it slowly. Nucleotide sequence analysis in our laboratory (unpublished) indicates that R. fragaria, R. muscorum and Leucosporidium scottii are closely related, yet distinct species. 105.29. Rhodotorula nothofagi (Ramirez & Gonzalez) Roeijmans, van Eijk & Yarrow (1989)

823

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate n Starch formation 5-Keto-D-gluconate n Urease + Saccharate Gelatin liquefaction D-Glucuronate Growth at 30°C + 50% (w/w) Glucose+ Growth at 2>TC yeast extract agar 10% NaCl/5% glucose s Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Xylose absent, fucose and rhamnose positive (Roeijmans et al. 1989).

Origin of the strain studied: Ramirez and Gonzalez (1984d) isolated a single strain of this species in 1980 from decayed wood of Nothofagus obligua (Mirb.) Blume in the evergreen rainy Valdivian forest of southern Chile, near the locality of Futrono. Type strain: CBS 8166 (Ramirez and Gonzalez number IFJM 6018). Comments: Ramirez and Gonzalez (1984d) reported that L-rhamnose was assimilated and that D-xylose, L-arabinose, D-arabinose, and D-ribose were not assimilated; we were unable to confirm these results.

Synonym: Apiotrichum nothofagi Ramirez & Gonzalez (1984d)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal to elongate, (2-6) X (4.7-8.7) |im, single or in pairs. After one month, 105.30. Rhodotorula philyla (van der Walt, van der islets and a heavy sediment are present. Klift & D.B. Scott) Rodrigues de Miranda Growth on 5% malt extract agar: After one month at & Weijman (Weijman et al. 1988) 25°C, the streak colony is light yellowish-pink, smooth, Synonyms: slightly glistening; the texture is butyrous, the cross Torulopsis philyla van der Walt, van der Klift & D.B. Scott (van der section is flat, and the margin is entire. Walt et al. 1971b) Dalmau plate culture on corn meal agar: After one week at 19°C, pseudomycelium is absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

-

+

-

+ + s s

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

+ s

-

+ + + +

-

+ s

-

w w

-

+

Candida philyla (van der Walt, van der Klift & D.B. Scott) S.A. Meyer & Yarrow (Yarrow and Meyer 1978) Vanrija philyla (van der Walt, van der Klift & D.B. Scott) R.T. Moore (1980)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ellipsoidal to ovoidal, (2^.7)X(3.3-6) |im, and occur singly, in pairs, or in chains. A thin ring and sediment are present. After one month at 20°C, a ring and sediment are present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is creamcolored, glistening, smooth, mucoid, and the margin is entire. Dalmau plate culture on corn meal agar: After one week at 19°C, no pseudomycelium is formed. Fermentation: absent.

Vic. Descriptions of anamorphic basidiomycetous genera and species

824

Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Assimilation: + + s + + + + + +

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate n Urease 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Growth at 3 0 ^ D-Glucuronate + Growth at 37T 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: 10 (Sugiyama et al. 1985). MoI% G + C: 62.9, type strain {T^ Meyer et al. 1984). Cell hydrolyzates: Fucose, rhamnose, mannose dominant, hexitol (probably mannitol) and pentitol (probably arabinitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Tunnels of the beetle Xyleborus ferrugineus F. infecting an indigenous tree, Harpephyllum caffrum Bernh. ex Krass, near Mtunzini, Natal (van der Walt et al. 1971b). Type strain: CBS 6272. 105.31. Rhodotorula phylloplana (Shivas & Rodrigues de Miranda) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonym: Cryptococcus phylloplanus Shivas & Rodrigues de Miranda (1983a)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal to cylindrical, (2.3-3.3)x(4.7-9.4)jim, and occur singly or in pairs. After one month, a very light ring and sediment have formed. Growth on 5% malt extract agar: After one month at 19°C, the streak colony is buff-colored, smooth, semiglistening, butyrous, and the margin is entire. Dalmau plate culture on corn meal agar: After one week at 19°C, pseudo- and true mycelium have not formed. Fermentation: absent.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + s + +

Additional assimilation tests and other growth characteristics:

Starch formation 2-Keto-D-gluconate n Urease 5-Keto-D-gluconate n Gelatin liquefaction Saccharate Growth at 2 5 ^ D-Glucuronate Growth at 30T 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Mannose low, malic acid (Weijman and Rodrigues de Miranda 1988).

Origin of the strain studied: Surface of leaves of the honeysuckle, Banksia collina R. Br., growing at Armidale, New South Wales, Australia, collected in 1981 (Shivas and Rodrigues de Miranda 1983a). Type strain: CBS 8073. Comments: R. phylloplana and R. hinnulea are the only species in the genus that demonstrate growth on inositol. The two species can be separated by their differences in utilizing cellobiose and trehalose. Shivas and Rodrigues de Miranda (1983a) reported that cellobiose, trehalose and soluble starch were assimilated weakly, and xylose, salicin and DL-lactic acid were assimilated strongly; we were unable to confirm these results. Nucleotide sequence analysis in our laboratory (unpublished) indicates that R. phylloplana is related to the Ustilaginales. This relationship is also suggested by the low level of mannose in the cell hydrolyzates, which is characteristic of the smut-like yeasts. 105.32. Rhodotorula pilati (F.H. Jacob, FaureRaynaud & Berton) J.A. Barnett, Payne & Yarrow (1983)

Synonym: Torulopsis pilati F.H. Jacob, Faure-Raynaud & Berton (1979)

Growth in 5% malt extract: After 3 days at 25°C, the cells are ovoidal, single or in pairs, measuring (4.06.0)X(5.0-12.7) |im. After one month a sediment and a ring have formed. Growth on 5% malt extract agar: After one month at 25''C, the colony is cream-colored, the cross section

825

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

is raised, the surface is glistening and smooth, and the margin is entire. Dalmau plate culture on corn meal agar: After one month at 25°C, neither true nor pseudomyceUum is present. Fermentation: absent. Assimilation: Glucose iV-Acetyl-D-glucosamine + Galactose Methanol L-Sorbose Ethanol Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

5 -Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose

n

V

-

+

Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+

-

+ + Additional assimilation tests and other growth characteristics: n Starch formation 2-Keto-D-gluconate -

-

Urease Gelatin liquefaction Growth at 25°C Growth at 3 0 T

+

-

+

-

-

Co-Q: Not determined. Mol% G + C: Not determined. Cell hydrolyzates: Fucose, rhamnose, mannose dominant, hexitol (probably arabinitol) and pentitol (probably mannitol) (Weijman and Rodrigues de Miranda 1988).

Origin of the strains studied: Leaf Utter of fir tree Abies alba located at an altitude of 1100m at Massif du Pilat, Loire, France (Jacob et al. 1979); decaying tree trunk, Portugal. Type strain: CBS 7039 (strain LYJ 382 of Jacob et al. 1979). Comments: The original description stated that nitrate was not assimilated, that growth occurred in the absence of vitamins and that a-methyl-D-glucoside was utilized as a sole carbon source, characteristics that we were unable to confirm. 105.33. Rhodotorula pustula (Buhagiar) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonyms: Torulopsis pustula Buhagiar (1975) Candida pustula (Buhagiar) S.A. Meyer & Yarrow (Yarrow and Meyer 1978)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ovoidal, long-ovoidal

Fig. 415. R. pustula, CBS 6527. Cells grown on com meal agar at 25°C after 5 days. Bar= 10 ^im.

to cylindrical, and pear-shaped, (3.4-5.6)x(8.4-10.6) ^m. After one month a ring and sediment are present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak is white to tanwhite, mucoid, glossy, smooth, and convex with an entire margin. Dalmau plate culture on corn meal agar: Branched chains of long, ovoidal cells are formed with short chains of blastoconidia (Fig. 415). Fermentation: absent. Assimilation of carbon compounds: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

+

-

+ +

-

+ + + s

-

A'^-Acetyl-D-glucosamine ! Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ s

-

+

-

+ +

-

+ +

-

+ +

-

+

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Starch formation n -

5-Keto-D-gluconate Saccharate D-Glucuronate 50% (w/w) Glucoseyeast extract agar 10% NaCl/5% glucose

+

n

-

+

-

Urease Gelatin liquefaction Growth at 2 5 T Growth at BO'^C

+

-

+

-

-

Co-Q: Not determined. Mol% G + C: 51.0, type strain {T^ ,: Meyer etal. 1984). Cell hydrolyzates: Fucose, rhamnose, mannose dominanit, hexitol (probably arabinitol and pentitol (probably mannitol) present (Weijman and Rodrigues de Miranda 1988).

Vic. Descriptions ofanamorphic basidiomycetous genera and species

826

Origin of the strains studied: Black currants {Ribes nigrum cultivar Baldwin) collected in 1971 and 1972 in England. Type strain: CBS 6527. Comments: The original description noted that hexadecane utilization was delayed, a characteristic that we were unable to confirm. 105.34. Rhodotorula sonckii (Hopsu-Havu, Tunnela & Yarrow) Rodrigues de Miranda & Weijman (Weijman et al. 1988) Synonym: Candida sonckii Hopsu-Havu, Tunnela & Yarrow (1978)

Growth in glucose-yeast extract-peptone water: After 3 days at 25°C, the cells are ellipsoidal to cylindrical, (2.5-4.0) X (7.0-12.0) [xm, single or in pairs. A sediment is formed. After one month at room temperature, a sediment is present. Growth on glucose-yeast extract-peptone agar: After one month at 25°C, the streak culture is creamcolored, smooth, glistening and flat. The margins are entire. Growth is slow. Dalmau plate culture on corn meal agar: After one week, pseudomycelium is not formed. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + s

-

+

-

+

V

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

-

s

-

+ +

-

s

-

+

-

+

-

growth

2-Keto-D-gluconate + Starch formation 5-Keto-D-gluconate Urease v Saccharate Gelatin liquefaction D-Glucuronate Growth at 25°C + 50% (w/w) GlucoseGrowth at 30°C yeast extract agar 10% NaCl/5% glucose Co-Q: Not determined. Mol% G + C: 44.1 {T^: Hopsu-Havu et al. 1978). Cell hydrolyzates: Fucose, mannose dominant (Weijman & Rodrigues de Miranda 1988).

Origin of the strains studied: Wall of a bathing pool during a routine check of hospital hygiene in the pediatric

department of the University Hospital of Turku, Finland in Oct. 1973 (CBS 6713, Hopsu-Havu et al. 1978); from the arm of a patient in Finland (CBS 8115), strain submitted to CBS by Hopsu-Havu. Type strain: CBS 6713. Comments: The original description noted that ribitol could not support growth as the sole source of carbon, a characteristic that we were unable to confirm. Comments on the genus Species in the genus Rhodotorula date to Fresenius (1850) with the description of Cryptococcus glutinis. The genus was formally described by Harrison (1928) to include red pigmented asporogenous yeasts. Other pigmented yeasts were placed in Chromotorula. The latter genus was rejected by Lodder (1934) who placed all of the carotenoid species in Rhodotorula. In the first edition of The Yeasts, A Taxonomic Study (Lodder and Kreger-van Rij 1952), Rhodotorula was distinguished as occasionally having a primitive pseudomycelium, producing carotenoid pigments and lacking the ability to ferment. Seven species were accepted. There was little change in the generic descriptions through the 2nd edition of ''The Yeasts'' with the exception that Rhodotorula species were described as not having the capacity to assimilate inositol nor synthesize starch-like compounds. Nine species were recorded in the genus. The major informative step, by this time, was the confirmation of the basidiomycetous nature of this genus, particularly the observations of teleomorphic stages described in the genus Rhodosporidium. The next major change was a result of an altered definition of Candida. Ascomycetous species were retained in Candida and the basidiomycetous species were separated based on the composition of cell hydrolyzates (Weijman and Rodrigues de Miranda 1983). Species with xylose in the cell hydrolyzates were placed in Cryptococcus and species which lacked xylose were relegated to Rhodotorula. The genus, as currently defined, includes 34 species that comprise a polyphyletic group of organisms. The separation of these species is based on 2 morphological characters, 19 physiological tests and one growth temperature test. To eliminate some of these tests, we present Tables 86-91, which employ a reduced number of characteristics. These tables include the teleomorphic species that could be identified with these tests. Our suggestion for an orderly identification procedure includes a preliminary screening with the following tests: assimilation of inositol, D-glucuronate and nitrate and the synthesis of starch. After comparing the results with Table 85, the next step is to examine the appropriate Table and use those tests. It is also valuable, in the initial stages of identification, to examine colony color, cell morphology and potential formation of mycelium and teliospores. Through the use of these identification shortcuts, it should not be necessary, for routine identifications, to employ all of the tests listed in Table 86. Mating tests

105. Rhodotorula EC. Harrison / J.W. Fell and A. Statzell-Tallman

should be undertaken when multiple strains of a species are available, because many of the Rhodotorula species are anamorphic strains of described and undescribed teleomorphic species. These mating tests consist of mixing multiple strains together on a complex nutrient medium such as com meal agar. If mating occurs, the number of strains can be reduced in subsequent crosses to find the mating pairs. Our laboratory is currently studying the molecular systematics of this genus. Some of the unpublished results, which were obtained after the completion of this manuscript, are included in the species comments. The results indicate diverse phylogenetic origins of species in the genus and that closely related anamorphic

827

species include members of the genera Bensingtonia, Sporobolomyces and Sterigmatomyces. Some species, particularly R. acheniorum, R. bacarum, R. hinnulea and R. phylloplana, may be related to the smut-like species in the Ustilaginales. In the near future, we plan to present an integrated view of the genus based on molecular and phenotypic data, which we hope will eliminate some of the taxonomic problems in Rhodotorula. Species not examined: The following species were not included because they came belatedly to the attention of the authors: Rhodotorula cresolica Middelhoven and Spaaij (1997) Rhodotorula vanillica J.P. Sampaio (1994)

828

Vic. Descriptions of anamorphic basidiomycetous genera and species

106. Sporobolomyces Kluyver & van Niel T. Boekhout and T. Nakase Diagnosis of the genus Cells are ellipsoidal, subglobose, fusiform or cylindroidal. Budding is mostly polar, rarely lateral or multilateral, with buds sessile or on short denticles, enteroblastic, and with percurrent or sympodial proliferation. Ballistoconidia are bilaterally symmetrical, ellipsoidal, falcate, allantoid, lacrymoid or amygdaliform. Colonies are salmon-pink, orangered, red, cream, or yellow-brown. Hyphae and pseudohyphae may be present. Sugars are not fermented. Diazonium blue B and urease reactions are positive. Xylose is absent from whole-cell hydrolyzates. The major ubiquinone is Q-10 or Q-10(H2). Type species Sporobolomyces salmonicolor (Fischer & Brebeck) Kluyver & van Niel Species accepted 1. Sporobolomyces 2. Sporobolomyces 3. Sporobolomyces 4. Sporobolomyces 5. Sporobolomyces 6. Sporobolomyces 7. Sporobolomyces 8. Sporobolomyces 9. Sporobolomyces 10. Sporobolomyces 11. Sporobolomyces 12. Sporobolomyces 13. Sporobolomyces 14. Sporobolomyces 15. Sporobolomyces 16. Sporobolomyces 17. Sporobolomyces 18. Sporobolomyces 19. Sporobolomyces 20. Sporobolomyces 21. Sporobolomyces

alborubescens Derx (1930) elongatus Shivas & Rodrigues de Miranda (1983) falcatus Nakase, M. Itoh & M. Suzuki (1987) foliicola Shivas & Rodrigues de Miranda (1983) gracilis Derx (1930) griseoflavus Nakase & M. Suzuki (1987) inositophilus Nakase & M. Suzuki (1987) kluyveri-nielii van der Walt (1986) lactophilus Nakase, M. Itoh, M. Suzuki & Bandoni (1990) oryzicola Nakase & M. Suzuki (1986) phyllomatis van der Walt & Y. Yamada (1988) roseus Kluyver & van Niel (1924) ruber (Nakase, Okada & Sugiyama) Boekhout (1991) salicinus (Johri & Bandoni) Nakase & M. Itoh (1988) salmonicolor (Fischer & Brebeck) Kluyver & van Niel (1924): see Sporidiobolus johnsonii, p. 694 sasicola Nakase & M. Suzuki (1987) shibatanus (Okunuki) Verona & Ciferri (1938): see Sporidiobolus pararoseus, p. 694 singularis Phaff & do Carmo-Sousa (1962) subbrunneus Nakase & M. Suzuki (1985) tsugae (Phaff & do Carmo-Sousa) Nakase & M. Itoh (1988) xanthus (Nakase, Okada & Sugiyama) Boekhout (1991)

Key to species See Table 92. 1. 2(1). 3(2). 4(3). 5(4). 6(5). 7(5). 8(4). 9(8).

a b a b a b a b a b a b a b a b a b

Self-sporulating formation of teliospores present Self-sporulating formation of teliospores absent —> 2 Nitrate assimilated -^ 3 Nitrate not assimilated -^ 17 Sucrose assimilated -^ 4 Sucrose not assimilated -^ 15 D-Ribose assimilated -^ 5 D-Ribose not assimilated -^ 8 Ethanol assimilated -^ 6 Ethanol not assimilated -^ 7 Strain mates with mating strain of Sporidiobolus salmonicolor Strain does not mate with mating strain of Sporidiobolus salmonicolor Maltose assimilated Maltose not assimilated Maltose assimilated -^ 9 Maltose not assimitated -^ 14 Raflfinose assimilated -^ 10 Raflfinose not assimilated —> 11

see Sporidiobolus: p. 693

S. salmonicolor: S. roseus: S. roseus: S. foliicola:

p. 839 p. 836 p. 836 p. 831

829

106. Sporobolomyces Kluyuer & van Niel / T. Boekhout and T. Nakase Table 92 Key characters of species in the genera Sporidiobolus and Sporobolomyces Species

Teliospore formation^

Sporidiobolus johnsonii S. pararoseus S. ruineniae S. salmonicolor Sporobolomyces alborubescens S. elongatus S. falcatus S. foliicola S. gracilis S. griseoflauus S. inositophilus S. kluyveri-nielii S. lactophilus S. oryzicola S. phyllomatis S. roseus S. ruber S. salicinus S. sasicola S. singularis S. subbrunneus S. tsugae S. xanthus

Self

Hetero

+ + +

+

Assimilation^ Gal

Sue

Mai

Cel

Lac

Raf

Ara

Rib

Eth

a-M

Sal

Nit

+ + + + + +

+ +

+

-

x^ + +

V

V

V

+ +

w +

-

+

+ +

+ +

+

-

-

-

+ + +

-

-

+ + + w + +

+ + + + +

+ +

V

-

-

V

+ + +

-

+ + +

+ + + +

+ + +

-

V

+

-

+ + V

+

-

+ +

+

V

V

-

+ + +

-

-

-

+

w

+ + +

+

+ +

-

V

+ + +

+

+ +

V

+

+ +

-

V

V

V

+

+ +

+

+ + + +

-

+

+

+

+ +

+ + V

-

+

+ +

-

-

-

+ + +

+ +

+ +

-

-

+

V

V

-

+

-

+

w

-

+

-

-

+ + + +

-

V

V

V

V

V

+

-

-

-

+

-

-

w w +

-

-

-

+

V

+

-

+

-

+ + V

-

-

+

+ +

+ w

-

-

+

+

+

+

-

+ + +

^ Self, teliospore formation by self-sporulation; hetero, teliospore formation by mating. '' Abbreviations: Gal, galactose; Sue, sucrose; Mai, maltose; Cel, cellobiose; Lac, lactose; Raf, raffinose; Ara, L-arabinose; Rib, D-ribose; Eth, ethanol; a-M, a-methyl-D-glucoside; Sal, salicin; Nit, nitrate. ^ Positive or weak.

10(9). a b 11(9). a b 12(11). a b 13(12). a b 14(8). a b 15(3). a b 16(15). a b 17(2). a b 18(17). a b 19(18). a b 20(19). a b 21(17). a b

Lactose weakly assimilated Lactose not assimilated Cellobiose assimilated -^ 12 Cellobiose not assimilated Salicin assimilated -^ 13 Salicin not assimilated Lactose assimilated Lactose not assimilated Cellobiose assimilated Cellobiose not assimilated Maltose assimilated Maltose not assimilated -^ 16 Cellobiose assimilated Cellobiose not assimilated Galactose assimilated -^ 18 Galactose not assimilated —> 21 Raffinose assimilated -^ 19 Raffinose not assimilated a-Methyl-D-glucoside assimilated -^ 20 a-Methyl-D-glucoside not assimilated L-Arabinose assimilated L-Arabinose not assimilated Cellobiose assimilated -^ 22 Cellobiose not assimilated

S. xanthus: p. 841 S. roseus: p. 836 S. inositophilus: p. 833 S. lactophilus: S. tsugae: S. griseoflauus: S. salicinus: S. subbrunneus: S. roseus:

p. p. p. p. p. p.

834 841 832 838 840 836

S. falcatus: p. 831 S. kluyveri-nielii: p. 834

S. phyllomatis: p. 835 S. alborubescens: p. 830 S. oryzicola: p. 835 Sporidiobolus pararoseus: p. 694 S. ruber: p. 837

830 22(21). a b 23(22). a b 24(22). a b

Vic. Descriptions of anamorphic basidiomycetous genera and species Maltose assimilated -^ 23 Maltose not assimilated -^ 24 Raffinose assimilated Raffinose not assimilated D-Ribose assimilated D-Ribose not assimilated

S. sasicola: S. elongatus: S. gracilis: S. singularis:

Systematic discussion of the species 106.1. Sporobolomyces alborubescens Derx (1930) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal, (6.0-9.0) x(4.0-6.5)Vm, and single. Budding is polar, and buds are sessile or on short denticles. Colonies are butyrous, smooth, glabrous, shiny, pinkish-red or red, and with the margin entire, straight or somewhat crenulate. Growth on the surface of assimilation media (glucose): A ring, islets and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, part of the cells form short, irregular hyphal outgrowths. Aerobic growth is red (brick red), shiny, butyrous, smooth or weakly ridged or grooved, somewhat raised, and with the margin entire. Formation of ballistoconidia: Ballistoconidia were not observed. According to Derx (1930) they measure 9.511.0x4 |im. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + v + + + + v -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Urease Nitrite Growth at 37''C

have lost the capacity to form ballistoconidia. Therefore, the species may be confused with species of Rhodotorula. Physiologically closely related Rhodotorula species are R. minuta and R. mucilaginosa. Rhodotorula minuta differs by a lower mol% G + C of 50.2-54.5 (Storck et al. 1969, Nakase and Komagata 1971c). Rhodotorula mucilaginosa is very similar, but can be differentiated by its lack of growth on salicin. 106.2. Sporobolomyces elongatus Shivas & Rodrigues de Miranda (1983b) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal, cylindrical to subglobose, (6.0-16.0)x(3.0-9.0)|Jim, and single. Budding is polar or lateral, and buds are sessile or on short denticles. Colonies are butyrous, smooth, shiny, salmon-pink, and with the margin entire. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, hyphae and pseudohyphae are absent. Cells are ellipsoidal to cylindroidal. Aerobic growth is orangepink to salmon, shiny, butyrous, smooth, with the center somewhat raised, and the margin entire. Formation of ballistoconidia: Ballistoconidia were not observed. According to Shivas and Rodrigues de Miranda (1983b), they are kidney-shaped, (5.0-8.0) x(2.54.0) jim. Fermentation: absent. Assimilation:

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% (w/w) Glucose v Starch formation Co-Q: 10 (Nakase 1989). Mol% G + C: 63.0, CBS 482 (BD:

p. 839 p. 830 p. 832 p. 839

+ +

Storck et al. 1969).

Origin of the strains studied: CBS 482 (ATCC 24216, JCM 5352, NRRL Y-6683, UCD-FST 68-329), leaf infected with rusts, H.G. Derx, France; CBS 6239, dialysis equipment, M. Bruining, Netherlands. Type strain: CBS 482. Comments: The two strains ofS. alborubescens studied

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + n -

831

106. Sporobolomyces Kluyuer & van Niel / T. Boekhout and T. Nakase

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Nitrite 50% (w/w) Glucose Growth at 25T Starch formation Growth at SO^C Urease + Co-Q: 10(H2) (Nakase and Suzuki 1986d). Mol% G + C: 56.5 (Nakase 1989).

+ -

Origin of the strain studied: CBS 8080 (ATCC 52908), leaf of Callistemon viminalis, J.F. Brown, Australia. Type strain: CBS 8080.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ +

-

+

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

Nitrite Growth at WC Growth at 37T

+ +

-

+ +

-

+ +

-

+ +

-

+ +

Comments: Sporobolomyces elongatus differs from all other Sporobolomyces species by the presence of n Co-Q 10(H2) (Nakase and Suzuki 1986d). Ballistoconid+ ium formation seems an easily lost feature of this species. + Rhodotorula minuta is physiologically similar, but differs Additional assimilation tests and other growth by its growth on ribitol and ethanol. characteristics: 106.3. Sporobolomyces falcatus Naliase, M. Itoh & M. Suzuki (1987a) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal, (4.0-8.5)x(l.5-3.5) |im, and single. Budding is usually polar, but also lateral, and with buds sessile or on short denticles and with sympodial or percurrent proliferation. Cells may form branched hyphae. Colonies are butyrous, shiny or dull, cream or grayish-white, with the margin entire or somewhat eroded. Growth on the surface of assimilation media (glucose): A ring and a sediment are formed. Dalmau plate on morphology agar: After 7 days at 25°C, no hyphae or pseudohyphae occur. However, short hyphae are formed on malt extract agar. Aerobic growth is pale cream, shiny, butyrous, smooth and slightly striated near the margin, with the center somewhat raised, and the margin entire, straight or crenulate. Formation of ballistoconidia: Ballistoconidia are formed on malt extract agar and corn meal agar. They are falcate or amygdaliform, (5.0-12.0)x(1.5-3.0)|im (Fig. 416). Fermentation: absent.

+ 2-Keto-D-gluconate 50% (w/w) Glucose Starch formation + Urease Co-Q: 10 (Nakase et al. 1987a). Mol% G + C: 53.1, JCM 6838 (T^,:

-

Nakase et al. 1987a).

Origin of the strain studied: CBS 7368 (ATCC 64693, JCM 6838), dead lesif of Miscanthus sinensis, T. Nakase, Japan. Type strain: JCM 6838. Comments: Sporobolomyces falcatus belongs to a group of species characterized by pale colonies and growth on 2-keto-D-gluconate (^'singularis group" according to Nakase 1989). Sporobolomyces falcatus is characterized by growth on D-glucosamine, and lack of growth on sucrose, maltose and melezitose. 106.4. Sporobolomyces foliicola Shivas & Rodrigues de Miranda (1983b) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal to subglobose, (7.516.5)X(5.0-13.0) jjim, and single. Budding is polar or multilateral, and with percurrent or sympodial proliferation. Colonies are butyrous, smooth, somewhat shiny, red (incarnate), and with the margin entire. Growth on the surface of assimilation media (glucose): Islets and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 25®C, no hyphae or pseudohyphae are formed. Aerobic growth is red (incarnate), somewhat dull, butyrous, smooth, with the center somewhat raised, and the margin entire.

Fig. 416. S. falcatus, CBS 7368. Ballistoconidia on malt extract agar. Bar=10^m.

Formation of ballistoconidia: Ballistoconidia are formed on corn meal agar. They are ellipsoidal, (6.59.5)x(4.0-)!Jim(Fig. 417).

832

Vic. Descriptions of anamorphic basidiomycetous genera and species

7 days at 17°C, hyphae or pseudohyphae are absent. CBS 7028 forms short hyphal outgrowths on corn meal agar. Aerobic growth is red, shiny, butyrous, smooth, flat or with the center somewhat raised, and the margin entire. Formation of ballistoconidia: Ballistoconidia were not observed. According to Derx (1930), they are pyriform, nearly symmetrical, (8.0-10.5)x(3.0-4.0) [im. Fermentation: absent. Fig. 417. S. foliicola, CBS 8075. Ballistoconidia on corn meal agar. Bar = 5^im.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

-

+ +

-

+

-

+ + + +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+

-

+

-

+ +

-

+

-

+

n

+ Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 50% (w/w) Glucose Starch formation

+

Nitrite Growth at SO^C Growth at 37''C

+ +

Urease + Co-Q: 10 (Nakase 1989). M o l % G + C: 56 (Nakase 1989).

Origin of strain studied: CBS 8075 (ATCC 52909, JCM 5355), leaf of Banksia collina, J.F. Brown, Australia. Type strain: CBS 8075. 106.5. Sporobolomyces gracilis Derx (1930) Growth on 5% malt extract agar: After 5 days at 17°C, the cells are cylindrical or ellipsoidal, (5.515.0)x(3.0-5.5)[xm, and single. Budding is polar or lateral with buds sessile or on short denticles and with sympodial or percurrent proliferation. Colonies are butyrous, smooth or somewhat warty, shiny or dull, red (brick red), and with the margin entire, straight or crenulate. Growth on the surface of assimilation media: Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After

Assimilation (17**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ -

-

-

+ +

-

+

-

V

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n +

-

+

-

+

V

V

+ V

-

n

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Nitrite V 50% (w/w) Glucose Growth at 25°C Starch formation Growth at 30T + Urease Co-Q: 10 (Nakase and Suzuki 1986d). Mol% G + C: 50.9 (Nakase 1989)

Origin of the strains Studied: CBS 71 (ATCC 24258, IFO 1033, JCM 2936, NRRL Y-5504, VKM Y-677, NI 7598, NX 7615), rotten leaves, H.G. Derx; CBS 7028 (UCD-FST 78-52), M. Miranda; CBS 7123, leaf of Phertinia glabra, K. Wickremasinghe, Australia. Type strain: CBS 71. Comments: Sporobolomyces gracilis is characterized by its inabilities to assimilate galactose, L-sorbose, sucrose, nitrate and nitrite. Since ballistoconidium formation is now absent in the strains studied, S. gracilis may be confused with species of Rhodotorula. Physiologically similar Rhodotorula species are R. aurantiaca, R. minuta and R. mucilaginosa. Rhodotorula aurantiaca differs by assimilation of nitrate and nitrite; R. minuta can be differentiated by growth on L-arabinose, sucrose and melezitose, whereas R. mucilaginosa differs by growth on sucrose and raffinose. 106.6. Sporobolomyces griseoflavus Nakase & M. Suzuki (1987b) Growth on 5% malt extract agar: After 5 days

833

106. Sporobolomyces Kluyver & van Niel / T. Boekhout and T. Nakase

at 25''C, the cells are ellipsoidal to fusiform, (7.510.0)x(2.0-3.5)[xm, and single. Budding is polar, with buds sessile or on short denticles and with sympodial proliferation. Colonies are butyrous to mucoid, smooth, shiny, grayish-white to yellowish-cream, and with the margin entire and finely crenulate. Growth on assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, no hyphae or pseudohyphae are formed. Aerobic growth is pale yellowish-brown, shiny, butyrous or mucoid, smooth, flat or with the center somewhat raised, and the margin entire. Formation of ballistoconidia: Formation of ballistoconidia is poor. Ballistoconidia are allantoid to falcate, (5.0-6.0)X(2.0)jJim. According to Nakase and Suzuki (1987b) they are abundantly formed, kidney- to sickleshaped, and (4.5-8.5)x(2.0-3.5)[im. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + + n + -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite + 50% (w/w) Glucose Growth at 2 5 T + Starch formation Growth at ?>{fC Urease + Co-Q: 10 (Nakase and Suzuki 1987b). Mol% G + C: 60.8-60.9, JCM 5653 {T^: Nakase and Suzuki 1987b).

Origin of the strain studied: CBS 7284 (JCM 5653), dead leaves of Sasa species, T. Nakase, Japan. Type strain: JCM 5653. Comments: Sporobolomyces griseoflavus belongs to the "singularis'' group, which is characterized by pale colonies and assimilation of 2-keto-D-gluconate. Among species belonging to this group, S. griseoflavus can be differentiated by growth on galactose, D-xylose, melezitose and starch, S. falcatus differs by lack of growth on D-arabinose, sucrose, maltose, melezitose and starch. Non-ballistoconidium forming species with a similar physiology are Cryptococcus albidus, Rhodotorula

aurantiaca, R. glutinis and R. pilati. Cryptococcus albidus differs by growth on L-arabinose, and the Rhodotorula species do not assimilate starch. 106.7. Sporobolomyces inositophilus Nakase & M. Suzuki (1987e) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal to fusiform, (6.014.0)x(2.0-3.0)|im, and single. Cells sometimes form hyphal outgrowths. Budding is polar with buds sessile or on short denticles that show sympodial proliferation. Colonies are mucoid, smooth, shiny, grayish-cream, and with the margin entire, straight or somewhat undulate. Growth on the surface of assimilation media: Islets and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, no hyphae or pseudohyphae are formed. On corn meal agar and malt extract agar hyphal outgrowths of up to 50|im are present. Aerobic growth is whitish to yellowish-cream, shiny, butyrous, smooth, slightly striate, with the center somewhat raised, and with the margin entire. Formation of ballistoconidia: Ballistoconidia are formed on corn meal agar and are reniform to falcate, (6.0-9.0)x(1.0-3.0)fxm (Fig. 418). Fermentation: absent. Assimilation (17**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Fig. 418. S. inositophilus, CBS 7310. Balhstoconidia on corn meal agar. Bar = 5fxm.

834

Vic. Descriptions of anamorphic basidiomycetous genera and species

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite + 50% (w/w) Glucose Growth at 25''C + Starch formation Growth at BO^C Urease + Co-Q: 10 (Nakase and Suzuki 1987e). Mol% G + C: 58.1, JCM 5654 {T^: Nakase and Suzuki 1987e).

Origin of the strain studied: CBS 7310 (JCM 5654), dead leaf of Sasa species, T. Nakase, Japan. Type strain: JCM 5654.

Fig. 419. iS. kluyveri-nielii, CBS 7168. Ballistoconidia on corn meal agar. Bar = 5fxm.

Additional assimilation tests and other growth Comments: Sporobolomyces inositophilus belongs to characteristics: + Nitrite + the ''singularis'' group. The species can be differentiated 2-Keto-D-gluconate 50% (w/w) Glucose Growth at 25°C + from other species by assimilation of inositol. Starch formation Growth at WC 106.8. Sporobolomyces kluyveri-nielii van der Walt (van der Walt et al. 1986a) Growth on 5% malt extract agar: After 5 days at 25T, the cells are ellipsoidal, (8.5-10.0)x(4.0-6.5)\im, and single. Budding is polar, with buds sessile or on short denticles and with percurrent and sympodial proliferation. Colonies are butyrous, smooth, dull, brownish-orange, and with the margin entire, straight or undulate. Growth on the surface of assimilation media (glucose): Islets and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, no hyphae or pseudohyphae are formed. On com meal agar, irregularly branched hyphae occur. Aerobic growth is orange, dull, butyrous, slightly warty to low pustulate, with the center somewhat raised, and the margin entire, straight or crenulate. Formation of ballistoconidia: Ballistoconidia occur on corn meal agar. They are allantoid or reniform, (10.020.0)X (4.0-8.5) ^m (Fig. 419). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafiinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+ + + +

Urease + Co-Q: 10 (Nakase 1989). Mol% G + C: 53.8, CBS 7168 (7;^: van der Walt et al. 1986a).

Origin of the strain studied: CBS 7168, leaves of Dombeya rotundifolia J.P. van der Walt, South Africa. Type strain: CBS 7168. Comments: Sporobolomyces kluyveri-nielii can be identified by an orange colony color, no assimilation of trehalose, cellobiose, and by formation of large ballistoconidia. 106.9. Sporobolomyces lactophilus Nakase, M. Itoh, M. Suzuki & Bandoni (1990b) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal, allantoid or cylindroidal, (8.5-22.0)X(2.0-3.5) ^m, and single. Budding is polar or lateral, with buds sessile, on denticles or on elongated stalks and showing sympodial proliferation. Colonies are butyrous or rather firm, flat, somewhat warty or reticulate, dull, cream, with the margin entire and crenulate. Growth on the surface of assimilation media: Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 25''C, poorly developed pseudohyphae and short hyphal elements are present. Aerobic growth is yellowishcream, dull, butyrous to rather firm, smooth, ridged, slightly warty or reticulate, flat or with the center somewhat raised, and with the margin entire and crenulate. Formation of ballistoconidia: Ballistoconidia occur on com meal agar. They are ellipsoidal, amygdaliform or falcate, (5.5-10.0)x(1.0-4.0)^im (Fig. 420). Fermentation: absent.

-

+

-

+ +

-

n +

-

Fig. 420. S. lactophilus, CBS 7527. Ballistoconidia on com meal agar. Bar = 5[xm.

106. Sporobolomyces Kluyver & van Niel / T. Boekhout and T. Nakase

835

Assimilation (ITC): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

H

+ + + + -

-/V-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Nitrite + 2-Keto-D-gluconate Growth at SO^'C + 50% (w/w) Glucose Growth at 35''C Starch formation + Urease Co-Q: 10 (Nakase et al. 1990b). Mol%G + C: 56.3-57.1, two strains, JCM 7595, JCM 7596 (T^: Nakase et al 1990b); 53.8-55.3 , two strains, JCM 7595, JCM 7596 (HPLC: Nakase et al. 1990b).

Origin of the strains studied: CBS 7527 (JCM 7595), JCM 7594, JCM 7597, all from dead branches of Abies firma, T. Nakase, Japan. Type strain: JCM 7595.

Fig. 421. S. oryzicola, CBS 7228. Ballistoconidia on corn meal agar. Bar = 5[im.

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + + + n -

Additional assimilation tests and other growth characteristics:

Comments: Conidiogenesis on long stalks as it occurs 2-Keto-D-gluconate + Nitrite Growth at SO^'C + in S. lactophilus is similar to that described for the 50% (w/w) Glucose Growth at ST^'C genus Ballistosporomyces (Nakase et al. 1989b). Among Starch formation + the species with pale colonies and lack of growth with Urease Co-Q: 10 (Nakase and Suzuki 1986b). 2-keto-D-gluconate, S. lactophilus can be differentiated by MoI% G + C: 61.1, JCM 5299 (T^: Nakase and Suzuki 1986b). absence of growth on raffinose and presence of growth on Origin of the strain studied: CBS 7228 (IFO 10180, butanediol-2,3 (Boekhout 1991a). JCM 5299), dead leaf of rice (Oryza satiua), T. Nakase, Japan. 106.10. Sporobolomyces oryzicola Nakase & Type strain: JCM 5299. M. Suzuki (1986b) Growth on 5% malt extract agar: After 5 days Comments: Sporobolomyces oryzicola is physiologically at 25°C, the cells are ellipsoidal or cylindroidal, (7.0- rather similar to S. alborubescens. This latter species can 9.0)X(3.0-5.0) |im, and single. Budding is polar, with be differentiated by a slightly higher mol% G + C (61 vs. buds sessile and with percurrent proliferation. Colonies 63), growth on ethanol, and lack of growth on a-methylare butyrous to mucoid, smooth, shiny, salmon-red, and D-glucoside. with the margin entire. 106.11. Sporobolomyces phyllomatis van der Walt & Growth on the surface of assimilation media Y. Yamada (van der Walt et al. 1988) (glucose): A ring and a sediment are formed. Growth on 5% malt extract agar: After 5 days at Dalmau plate culture on morphology agar: After 25°C, the cells are ellipsoidal, ovoidal or cylindroidal, 7 days at 25''C, hyphae or pseudohyphae are absent. (8.0-16.0)X(3.0-7.0) ^m, and single, or in short chains. Aerobic growth is dark red, shiny, butyrous, smooth, and Budding is polar, with buds sessile and with percurrent with the center somewhat raised and the margin entire. proliferation. Scars are distinct. Cells occasionally develop Formation of ballistoconidia: Ballistoconidia occur on hyphae of up to ca. 55 |im long. Colonies are butyrous, corn meal agar. They are ellipsoidal, (10.0-13.5)x(4.0- smooth, shiny, orange-brown or pinkish-orange, and with the margin entire. 5.0)!im(Fig. 421).

836

Vic. Descriptions of anamorphic basidiomycetous genera and species

Growth on the surface of assimilation media: A ring and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, short hyphae and pseudohyphae occur (Fig. 422A). Aerobic growth is orange, brownish-orange or pinkish-orange, dull or shiny, smooth or slightly striate, flat or with the center somewhat raised, and with the margin entire. Formation of ballistoconidia: Ballistoconidia are formed on corn meal agar. They are ellipsoidal to allantoidal, (7.0-13.0)x(3.0-5.0) ^im (Fig. 422B). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ + + +

-

+

-

+ + +

-

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

-

+ + + +

-

+

-

+ +

-

n

-

Fig. 422. S. phyllomatis, CBS 7198. (A) Pseudomycelium on morphology agar. (B) Ballistoconidia on corn meal agar. Bar = 5 [im.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Nitrite 50% (w/w) Glucose Growth at 25''C + Starch formation Growth at 30°C Urease + Co-Q: 10 (van der Walt et al. 1988). Mol% G + C: 47.4, CBS 7198 {T^\ van der Walt et al. 1988).

Origin of the strains studied: CBS 7198 (JCM 7549), CBS 7199, both from leaf of Dombeya rotundifolia, J.P. van der Walt, South Africa. Type strain: CBS 7198. Comments: Spowbolomyces phyllomatis shares with S. kluyveri-nielii and S. salicinus the characteristics of orange colonies and large ballistoconidia. Spowbolomyces phyllomatis can be differentiated from S. kluyveri-nielii by growth on L-rhamnose, sucrose, maltose, trehalose and melezitose, and lack of growth on nitrate and nitrite. Spowbolomyces salicinus differs by lack of growth on L-rhamnose, maltose, melezitose, 2-keto-D-gluconate, D-gluconate, and growth on nitrate and nitrite. 106.12. Spowbolomyces roseus Kluyver & van Niel (1924) Synonyms: ITorula cinnabarina Jorgensen (1909) Sporobolomyces tenuis Kluyver & van Niel (1924) Cryptococcus puluerulentus Beyerinck (nom. nud.) ex Kluyver and van Niel (1924) Torula photographa Biourge (nom. nud.) ex Kluyver and van Niel (1924) Sporobolomyces photographus (Biourge) Ciferri & Redaelli (1925) Amphiema rubra Gruss (1926) Sporobolomyces salmoneus Derx var. salmoneus Derx (1930) Sporobolomyces salmonicolor (Fischer & Brebeck) Kluyver & van Niel var. salmoneus (Derx) Verona & Ciferri (1938) Sporobolomyces salmoneus Derx var. albus Derx (1930) Sporobolomyces salmonicolor (Fischer & Brebeck) Kluyver & van Niel var. albus (Derx) Verona & Ciferri (1938) Torulopsis somala Verona (1935) Sporobolomyces pollaccii Verona & Ciferri (1938) Sporobolomyces miniatis Yamasaki & Fujii (1950) nom. illeg. Sporobolomyces ruberrimus Yamasaki & Fujii (1950) var. ruberrimus nom. illeg. Sporobolomyces ruberrimus Yamasaki & Fujii (1950) var. albus Yamasaki & Fujii (1950) nom. illeg. Sporobolomyces roseus Kluyver & van Niel var. madurae A. Janke (1954) Sporobolomyces boleticola C. Ramirez Gomez (1957)

Growth on 5% malt extract agar: After 5 days at IS^'C, the cells are ellipsoidal to cylindroidal, (9.024.0)x(3.0-8.5) |im, and single. Budding is usually polar, with buds sessile or on short denticles and with percurrent or sympodial proliferation. Cells sometimes germinate with slender hyphae. Hyphae and pseudohyphae are sometimes present. Colonies are butyrous or tending to mucoid, smooth, warty, venose to reticulate, sometimes striate, flat to raised, shiny or dull, orange to salmon-pink, and with the margin eroded, or entire and crenulate.

106. Sporobolomyces Kluyuer & van Niel / T. Boekhout and T. Nakase

Fig. 423. S. roseus, CBS 485. Ballistoconidia on morphology agar. Bar = 5|im.

Growth on the surface of assimilation media (glucose): A ring, a film and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, hyphae and pseudohyphae sometimes occur. Large globose to subglobose cells frequently occur, (8.0-25.0)x(7.0-16.0) |im. Aerobic growth is pinkish-red, orange-red or brownish-orange, dull or shiny, butyrous, smooth, reticulate or warty, flat, and with the margin eroded or entire. Formation of ballistoconidia: Ballistoconidia are formed on many artificial media. They are ellipsoidal or allantoid, (7.0-14.0)x(3.0-6.0) |im (Fig. 423). Sterigmata frequently are sympodially branched. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V V V + V V + V V V V V V V -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Nitrite + 50% (w/w) Glucose Growth at 25''C + Starch formation Growth at 30°C v Urease + Growth at 3 7 T Co-Q: 10 (Nakase and Suzuki 1986d). Mol% G + C; 50 (BD: Storck 1966); 53.5-56 (BD: Storck et al. 1969); 50.5-56.0 (Nakase 1989); 49.5-52.1, 6 strains (T;^: Boekhout 1991a).

Origin of the strains studied: CBS 485 (IFO 1037, NRRL Y-5480, NI 7593), mycotic lesion of mucous membranes, G. Pollacci, Italy; CBS 486 (ATCC 24257, JCM 5353, MUCL 30251, NRRL Y-5506, UCD-FST 68-353), M.W. Beyerinck; CBS 488 (IFO 1105, NRRL Y-5482, VKM Y-683), etiolated grass, H.G. Derx, Netherlands; CBS 492 (IFO 1040, NRRL Y-5485, NI 7601), diseased

837

potatoes, M.W. Beyerinck, Netherlands; CBS 493 (NRRL Y-5477, VKM Y-686), nectar of Linaria sp., J. Griiss, Germany; CBS 494 (NRRL Y-5486), air, S.L. Schouten, Netherlands; CBS 993, soil, O. Verona, Somalia; CBS 2641, air, J.H. Becking, Netherlands; CBS 1036, wood pulp, R Redaelli; CBS 2646, madura foot, A. Janke, Austria; CBS 5004, J. Ruinen, Indonesia; CBS 7500, A. Shiraishi, Japan; CBS 7501, pale mutant of CBS 7500. Type strain: CBS 486. Comments: Sporobolomyces roseus agrees in many aspects with S. shibatanus, the anamorph of Sporidiobolus pararoseus. They agree in the color of the colony, mol% G + C, partial 18S rRNA sequences (Takematsu et al. 1990), and many physiological test results. Mating experiments among isolates of S. roseus were negative (Boekhout 1991a). From a practical point of view, S. roseus can be differentiated from S. shibatanus by growth with nitrate and nitrite. Sporobolomyces roseus occurs in the phyllosphere (Derx 1930, Tubaki 1953, Last 1955, van der Burg 1974). According to the latter author, S. roseus belongs to the socalled "sugar" fungi, which use honey-dew for growth. 106.13. Sporobolomyces ruber (Nakase, Okada & Sugiyama) Boekhout (1991a) Synonym: Ballistosporomyces

ruber Nakase, Okada & Sugiyama (1989b)

Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal to fusiform, (6.09.0) X (2.0-3.0) jim, and single or in short branched chains. Budding is polar and lateral, with the buds usually on short denticles or stalks, which generally proliferate sympodially. Colonies are butyrous or rather tough, somewhat pustulate, dull or somewhat shiny, pinkish-red, and with the margin entire. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, hyphae and pseudohyphae are absent. Aerobic growth is orange-cream, orange-pink (salmon) or brownish-orange, dull or somewhat shiny, moist or somewhat tough, somewhat pustulate or reticulate, convex, and with the margin entire and crenulate. Formation of ballistoconidia: Ballistoconidia occur on malt extract agar and potato-dextrose agar. They are allantoid, and measure (6.0-12.5)x(l.5-5.0) |im (Fig. 424). Fermentation: absent.

Vic. Descriptions of anamorphic basidiomycetous genera and species

838

106.14. Sporobolomyces salicinus (Johri & Bandoni) Nakase & M. Itoh (1988) Synonym: Bullera salicina John & Bandoni (1984)

Fig. 424. S. ruber, CBS 7512. Ballistoconidia on malt extract agar. Bar = 5|im.

Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + -

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Nitrite 2-Keto-D-gluconate w/Growth at 2 5 ^ 50% (w/w) Glucose Growth at 30°C Starch formation Urease Co-Q: 10 (Nakase et al. 1989b). Mol% G + C: 50.8, JCM 6884 {T^ : Nakase et al. 1989b); 48.3, JCM 6884 (HPLC: Nakase et al. 1989b).

Origin of the strain studied: CBS 7512 (JCM 6884, NB 258), dead leaf of Vitisficifoliavar. lobata, T. Nakase, Japan. Type strain: JCM 6884. Comments: Sporobolomyces ruber has a distinctive mode of conidiogenesis in which conidia are usually formed on sympodially or percurrently proliferating denticles and stalks. Besides typical ballistoconidia, morphologically similar, but not actively discharged cells are formed. These types of reproduction were also observed in some other species, e.g., Bensingtonia ingoldii, B. miscanthi and S. lactophilus (Boekhout 1991a). Sporobolomyces ruber is characterized by salmon-orange colonies, lack of growth on trehalose and by its mode of conidiogenesis.

Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal, cylindrical or subglobose, (8.0-14.0)X(4.0-7.0) ^m, and single. Budding is polar, with the buds sessile or on short denticles and showing percurrent or sympodial proliferation. Scars are present. Pseudohyphae and short hyphae occasionally occur. Colonies are butyrous, smooth or slightly warty, dull or shiny, orange or brownish-orange, and with the margin entire, straight or crenulate. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, poorly developed pseudohyphae occur. Aerobic growth is pinkish to brownish-orange, shiny or dull, butyrous, smooth or somewhat warty, flat, and with the margin entire and straight. Formation of ballistoconidia: Ballistoconidia occur on com meal agar. They are ellipsoidal to allantoid, and measure (12.0-23.0)x(5.0-8.0) fxm (Fig. 425). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + -

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Fig. 425. S. salicinus, CBS 6983. Ballistoconidia on corn meal agar. Bar = 5^m.

106. Sporobolomyces Kluyuer & van Niel / T. Boekhout and T. Nakase

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 50% (w/w) Glucose Starch formation Urease Co-Q: 10 (Nakase 1989). Mol% G + C: 51.1, JCM

+

Nitrite Growth at 30^0 Growth at 37''C

+ +

2959 {T^: Nakase and Itoh 1988).

Origin of the strain studied: CBS 6983 (JCM 2959, UBC 8081), leaf of willow {Salix sp.), RJ. Bandoni, British Colombia, Canada. Type strain: UBC 8081.

839

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + +

Comments: Sporobolomyces salicinus has orange colonies and large ballistoconidia. These characteristics also occur in S. kluyveri-nielii and S. phyllomatis. Sporobolomyces salicinus can be differentiated from these n species by growth on salicin and raffinose, and lack of growth on 2-keto-D-gluconate and D-gluconate. According to Takematsu et al. (1990), partial 18S rRNA sequences of S. salicinus are similar to those of S. phyllomatis and Additional assimilation tests and other growth S. gracilis. Enteroblastic conidiation, scars and a thickened characteristics: 2-Keto-D-gluconate Nitrite cell wall are obvious in older cultures. 50% (w/w) Glucose Growth at 25«C + Starch formation Growth at SOT Urease + Co-Q: 10 (Nakase and Suzuki 1987b). Mol% G + C: 56.9, JCM 5979 (7;^: Nakase and Suzuki 1987b).

106.15. Sporobolomyces salmonicolor (Fischer & Brebeck) Kluyver & van Niel (1924) See under teleomorph Sporidiobolus johnsonii Nyland, Origin of the strain studied: CBS 7285 (JCM 5979), p. 694 dead leaf of ^Sa^a sp., T. Nakase, Japan. Type strain: JCM 5979. 106.16. Sporobolomyces sasicola Naliase & M. Suzuki (1987b) Comments: Sporobolomyces sasicola is characterized by Growth on 5% malt extract agar: After 5 days pale colonies and lack of growth with 2-keto-D-gluconate. at 25°C, the cells are ellipsoidal or cylindroidal, (7.0- It differs from other species with these characteristics, viz. 15.0)X(2.0-3.5) fJim, and single. Budding is usually polar S. lactophilus, S. subbrunneus and S. xanthus, by growth and sessile. Colonies are butyrous, smooth or somewhat with L-arabinose, and lack of growth with citrate, nitrate warty, shiny, yellowish-cream, and with the margin entire and nitrite. and straight. Growth on the surface of assimilation media 106.17. Sporobolomyces shibatanus (Okunuki) Verona & Ciferri (1938) (glucose): Absent, but a sediment is formed. See under teleomorph Sporidiobolus pararoseus Fell & Dalmau plate culture on morphology agar: After Tallman, p. 694 7 days at 25°C, hyphae and pseudohyphae are absent. Aerobic growth is pale yellowish-brown, shiny or dull, 106.18. Sporobolomyces singularis Phaff & do butyrous, flat, ridged or somewhat reticulate, slightly Carmo-Sousa (1962) inflated toward the margin, and with the margin entire, Synonym: straight, undulate or crenulate. Bullera singularis (Phaff & do Carmo-Sousa) Rodrigues de Miranda Formation of ballistoconidia: Ballistoconidia occur on corn meal agar, malt extract agar and potato-dextrose agar. They are allantoid, (6.0-10.0)x(2.0-3.0)!im (Fig. 426).

Fig. 426. S. sasicola, CBS 7285. Ballistoconidia on malt extract agar. Bar = 5^im.

(1984c)

Growth on 5% malt extract agar: After 5 days at 25°C, the cells are ellipsoidal to subglobose, (6.012.0)x(2.5-6.0)|im, and single. Budding is polar, with the buds sessile or on short denticles and with percurrent or sympodial proliferation. Colonies are mucoid, smooth, shiny, pale yellowish-brown, and with the margin entire and straight. Growth on the surface of assimilation media: Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After

840

Vic. Descriptions of anamorphic basidiomycetous genera and species

7 days at 15°Q, no hyphae or pseudohyphae are formed. Aerobic growth is whitish to cream, shiny, mucoid, smooth, somewhat raised, and with the margin entire. Formation of ballistoconidia: BalHstoconidia were not observed. According to Phaff and do Carmo-Sousa (1962), they are bilaterally symmetrical, and kidney- to sickle-shaped. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + v + -

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + 50% (w/w) Glucose Starch formation Urease + Co-Q: 10 (Nakase 1989). Mol% G + C: 58.0 (Nakase 1989).

Nitrite Growth at 2 5 T Growth at SOT

Fig. 427. S. subbrunneus, CBS 7196. Ballistoconidia on malt extract agar. Bar = 5|im.

buds usually sessile. After prolonged cultivation poorly developed pseudohyphae sometimes occur. Colonies are butyrous, smooth to slightly warty, dull, pale yellowishbrown, and with the margin entire and straight. Growth on the surface of assimilation media (glucose): Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, no hyphae or pseudohyphae occur. Aerobic growth is pale yellowish-brown, dull, butyrous, smooth or slightly warty, flat, and with the margin entire. Formation of ballistoconidia: Ballistoconidia occur on malt extract agar and yeast extract-malt extract agar. They are ellipsoidal or allantoid, (6.0-11.0) x (2.5-4.0) |im (Fig. 427). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n + + + + + + + + n + -

Origin of the strain studied: CBS 5109 (ATCC 24193, JCM 5356, NCYC 900, NRRL Y-5852, UCD-FST 6079), frass from Scolytus tsugae in dead specimen of Tsuga heterophylla, H.J. Phaff and L. do Carmo-Sousa, Oregon, USA. Type strain: UCD-FST 60-79 (CBS 5109). Comments: Sporobolomyces singularis belongs to a group of species with pale colonies and that assimilate 2-keto-D-gluconate. S. singularis can be differentiated from other species of this group by a combination of mucoid colonies and lack of assimilation of D-xylose, sucrose, maltose, nitrate and nitrite. Rhodotorula foliorum and R. lignophila do not form ballistoconidia but are Additional assimilation tests and other growth physiologically and morphologically similar. Rhodotorula characteristics: Nitrite + foliorum differs by assimilation of arbutin, nitrate and 2-Keto-D-gluconate 50% (w/w) Glucose Growth at 2 5 T + nitrite, while R. lignophila fails to grow with D-arabinose, Starch formation Growth at SO^C salicin and ribitol. Urease + 106.19. Sporobolomyces subbrunneus Nakase & M. Suzuki (1985c) Growth on 5% malt extract agar: After 5 days at 25°C, the cells are fusiform to ellipsoidal, (7.511.0)X(2.0-3.0) jim, and single. Budding is polar with the

Co-Q: 10 (Nakase and Suzuki 1985c). Mol% G + C: 68, JCM 5278 (7;^: Nakase and Suzuki 1985c).

Origin of the strain studied: CBS 7196 (IFO 10168, JCM 5278), rice {Oryza satiua), T. Nakase, Japan. Type strain: JCM 5278. Comments: Sporobolomyces subbrunneus belongs to

106. Sporobolomyces Kluyver & van Niel / T. Boekhout and T. Nakase

841

a group of species with pale colonies and inability Additional assimilation tests and other growth to assimilate 2-keto-D-gluconate. Among these species, characteristics: + Nitrite + S. subbrunneus can be characterized by its lack of growth 2-Keto-D-gluconate Growth at 25''C + with maltose, cellobiose, and by assimilation of lactate and 50% (w/w) Glucose Starch formation Growth at SO^C v D-gluconate. Urease + Growth at 2>TC 106.20. Sporobolomyces tsugae (Phaff & do CarmoSousa) Nakase & M. Itoh (1988) Synonym: Bullera tsugae Phaff & do Carmo-Sousa (1962)

Growth on 5% malt extract agar: After 5 days at 25°C, the cells are globose to subglobose or ellipsoidal, (3.5-8.0)X(5.0-7.5) [im, and single. Short germ hyphae sometimes occur. Budding is polar, with percurrent or sympodial proliferation. Colonies are mucoid, smooth, shiny, cream to pale yellowish-brown, lack color near the margin, and with an entire, straight or undulate margin. Growth on the surface of assimilation media (glucose): A ring, islets and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, no hyphae or pseudohyphae are formed. Aerobic growth is whitish to cream, lacking color near the margin, shiny, mucoid, smooth, convex, and with the margin entire, straight or undulate. Formation of ballistoconidia: Ballistoconidia are formed on morphology agar. They are ellipsoid, (6.010.5)x(3.0-7.0)!im (Fig. 428). Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + + + +

-

+

-

+

V

-

Co-Q: 10 (Nakase 1989). Mol% G + C: 50.4-52.3, two strains, CBS 5038, CBS 7096 (7;,: Boekhout 1991a); 50.4 (Nakase 1989).

Origin of the strains studied: CBS 5038 (ATCC 18802, JCM 2960, UCD-FST 60-71), frass from an insect under the bark of Tsuga heterophylla, HJ. Phaff and L. do Carmo-Sousa, Oregon, USA; CBS 7096, polluted water, F. Hinzelin, France; ICG 4441, rotten trunk of a tree, A. Fonseca, Portugal. Type strain: UCD-FST 60-71 (CBS 5038). Comments: Sporobolomyces tsugae belongs to a group of species with pale colonies that assimilate 2-ketoD-gluconate. Among these species, S. tsugae can be differentiated by assimilation of L-sorbose and a-methylD-glucoside. According to Phaff and do Carmo-Sousa (1962), balHstoconidia are globose (UCD-FST 60-71). However, no ballistoconidia were observed in this strain by the present authors. CBS 7096 and ICG 4441 form distinct bilaterally symmetrical ballistoconidia. 106.21. Sporobolomyces xanthus (Nakase, Okada & Sugiyama) Boekhout (1991a) Synonym: Ballistosporomyces xanthus Nakase, Okada & Sugiyama (1989b)

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

+ +

V

-

+ + V

+ + + + +

-

n +

-

Growth on 5% malt extract agar: After 5 days at 25''C, the cells are ellipsoidal or allantoid, (7.010.0)x(2.5^.0)[im, and single. Budding is multipolar, usually on short denticles, and with the buds frequently allantoid. Colonies are butyrous, smooth, shiny, pale yellowish-brown, and with the margin entire and straight. Growth on the surface of assimilation media: Absent, but a sediment is formed. Dalmau plate culture on morphology agar: After 7 days at 25°C, hyphae and pseudohyphae are absent, but yeast cells form undifferentiated chains. Aerobic growth is yellow-brown or orange-yellow, shiny, but towards the margin becoming dull, butyrous, flat, somewhat reticulate, near the margin slightly striate, and with the margin entire, straight or lobate. Formation of ballistoconidia: Ballistoconidia occur on corn meal agar and malt extract agar. They are allantoid, (4.5-9.0) X (2.0-4.0) iim (Fig. 429).

Fig. 428. S. tsugae, CBS 7096. Ballistoconidia on morphology agar. Bar = 5fxm.

Fermentation: absent.

842

Vic. Descriptions of anamorphic basidiomycetous genera and species

characteristics, S. xanthus can be differentiated by growth on D-galactose and from its morphology. Comments on the genus The genus Sporobolomyces is characterized by the formation of ballistoconidia, lack of xylose in wholecell hydrolyzates, and, usually, Co-Q 10 as the major ubiquinone. Several species have red, orange or pink colonies due the presence of |3-carotenoids, y-carotenoids, torulene and torularhodine (Valadon 1966, Fiasson 1967, Fiasson et al. 1973). Recently, species with pale colonies have been described, which, presumably, do not form these pigments. The pale colored species can be divided into two groups based on the assimilation of 2-keto-Dgluconate (Nakase 1989). A considerable heterogeneity of the genus is indicated by rRNA sequences (Takematsu et al. 1990, Fell et al. 1992). The presence of Co-Q 10(H2) in S. elongatus (Nakase and Suzuki 1986d) suggests a further heterogeneity within the genus. Subdivision of the genus based on the presence or absence of pseudohyphae Fig. 429. S. xanthus, CBS 7513. (A) Yeast cells on morphology agar. (Ciferri and Redaelli 1929, Novak and Zsolt 1961) was (B) Ballistoconidia on corn meal agar. (C) Formation of stalked conidia rejected by Lodder and Kreger-van Rij (1952). on yeast extract-malt extract agar. Bar= 10|im. Two species, viz. S. salmonicolor and S. shibatanus, have their teleomorphs in the teliospore-forming genus Assimilation (17"C): Sporidiobolus. Differences in DNA contents among cells Glucose + A'^-Acetyl-D-glucosamine n of a strain of ^S. salmonicolor were interpreted to represent Galactose + Methanol haploid and diploid stages (van der Walt and Pitout L-Sorbose Ethanol 1969). A teleomorph genus, Aessosporon van der Walt, Sucrose + Glycerol with A. salmonicolor van der Walt as type species was Maltose + Erythritol described based on this supposedly diploid stage (van Cellobiose + Ribitol + Trehalose + Galactitol der Walt 1970f). However, later authors observed mating, Lactose + D-Mannitol + including formation of dikaryotic hyphae with clamp Melibiose D-Glucitol + connections and teliospores, between the type strains of Raffinose + a-Methyl-D-glucoside + A. salmonicolor and S. salmonicolor (Fell and StatzellMelezitose Salicin Inulin D-Gluconate Tallman 1980b). Therefore, the genus Aessosporon is not Soluble starch + DL-Lactate recognized as representing the teleomorph. D-Xylose Succinate + A close taxonomic relationship has been proposed L-Arabinose + Citrate + between species oi Sporobolomyces and the genus RhodoD-Arabinose Inositol torula (Janke 1954, Crook and Johnston 1962, Tsuchiya D-Ribose Hexadecane n L-Rhamnose Nitrate + et al. 1969, Weijman and Rodrigues de Miranda 1988, D-Glucosamine Vitamin-free Golubev 1989a,b, Dorfler 1990). This is supported by nuAdditional assimilation tests and other growth cleotide sequences of the large subunit rRNAs of species belonging to both genera, which resulted in heterogeneous characteristics: dendrograms (Fell et al. 1992). This may indicate that Nitrite 2-Keto-D-gluconate Growth at 30T 50% (w/w) Glucose currently used generic concepts are not adequate from an Growth at 37°C Starch formation evolutionary point of view. However, for practical reasons, Urease + we maintain the generic separation of ballistoconidiaCo-Q: 10 (Nakase et al. 1989b). forming and non-ballistoconidia-forming genera. Mol% G + C: 62.1, JCM 6885 {T^ Nakase et al. 1989b); 56.8, JCM Conidiogenesis is usually polar, but sometimes may also 6885 (HPLC: Nakase et al. 1989b). be multipolar. Cells are usually formed on short denticles, Origin of the strains studied: CBS 7513 (JCM 6885, but in some species elongate denticles or stalks occur NB 206), dead leaf of ^cer rufinerue, T. Nakase, Japan. (Boekhout 1991a). Scars may be distinct (de Hoog 1982, Type strain: JCM 6585. Boekhout 1991a), and proliferation is percurrent and/or Comments: Sporobolomyces xanthus belongs to a group sympodial. The genus Ballistosporomyces was described for two of species with pale colonies and which do not grow with 2-keto-D-gluconate. Among the species with these species, which were reported to reproduce by formation

106. Sporobolomyces Kluyver & van Niel / T. Boekhout and T. Nakase

of ballistoconidia and inactively discharged conidia, but not by budding cells (Nakase et al. 1989b). The inactively discharged conidia are formed on denticles or stalks, which proliferate sympodially or percurrently. However, these types of conidiogenesis were observed in other species of Sporobolomyces as well, e.g., in S. lactophilus, and budding cells do occur in the genus Ballistosporomyces (Boekhout 1991a). Therefore, Ballistosporomyces is considered to be congeneric with Sporobolomyces (Boekhout 1991a). Conidium formation

843

on elongate denticles and stalks, as observed in some species of Sporobolomyces and Bensingtonia (Boekhout 1991a), and other characteristics, such as ubiquinone and carbohydrate composition, are similar to those characteristics in Kurtzmanomyces (Yamada et al. 1988a, Nakase et al. 1989b). Several species of Sporobolomyces, e.g., S. roseus, widely occur in nature. An important habitat is the phyllosphere (Derx 1930). Air-borne propagules of Sporobolomyces can cause respiratory allergy (Evans 1965).

Vic. Descriptions of anamorphic basidiomycetous genera and species

844

107. Sterigmatomyces Fell emend. Y. Yamada & Banno I. Banno and Y. Yamada Diagnosis of the genus Cells are spherical to ovoidal and produce one or more short conidiogenous stalks (1.5-3.0 [im length). A conidium develops terminally on the stalk. When the new cell (conidium) is mature it may in turn produce stalks, often resulting in short branched chains of cells. Newly formed cells separate at a septum, in the mid-region of the stalk on the parent cell. True mycelium is not produced. Ballistoconidia are not produced. Glucose is not fermented. Nitrate may or may not be assimilated. mj^o-Inositol is not assimilated. Diazonium blue B color reaction is positive. Xylose is absent in the cells. Coenzyme Q-9 is present. Type species Sterigmatomyces halophilus Fell Species accepted 1. Sterigmatomyces elviae Sonck & Yarrow (1969) 2. Sterigmatomyces halophilus Fell (1966) Key to species See Table 93. 1.

a Sucrose assimilated, growth at 37°C b. Sucrose not assimilated, growth absent at ST^'C

S. eluiae: p. 844 S. halophilus: p. 845

Table 93 Key characters of the species in the genus Sterigmatomyces Assimilation

Species

Sterigmatomyceseluiae S. halophilus

Sucrose

Lactose

+

+

+

V

-

Systematic discussion of the species 107.1. Sterigmatomyces elviae Sonck & Yarrow (1969) Growth in malt extract: After 3 days at 24°C, the cells are spherical to ovoidal, (3-6) x (3-10) |im, and reproduce by the formation of conidia on one to five short (<2 |im) stalks on each cell. The conidia are separated at the midpoint of the stalks on the parent cell. Occasionally, the conidia form additional stalked conidia and appear as a chain of conidia. Conidiogenous stalks are often so short that cell propagation appears to be typical budding. A light ring and sediment are present. After one month the cells are within the same size range; a moderate ring and sediment are present. Growth on malt agar: Two colony types are found; in one type the streak culture is smooth, dull, cream-colored, edges entire, with cells similar to those described in malt extract. The other type differs and forms a glistening and viscous colony. Cells are ellipsoidal and apiculate, (2-7)x(3-13)ji-m, with one, or rarely, more short stalks (0.5 jim) and the general appearance of a typically budding yeast cell.

Raffinose

Growth at 37°C

Mol%G + C

+

52.0 55.3

Nitrate V

Dalmau plate culture on corn meal agar: Pseudomycelium and true mycelium are absent. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ +

-

+ + +

-

+

-

+ + + +

-

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

-

+ + + + + + +

-

+ s/+ V

+ +

-

845

107. Sterigmatomyces Fell emend. Y. Yamada & Banno /I. Banno and Y. Yamada

Additional assimilation tests and other growth characteristics: Starch formation 2-Keto-D-gluconate + Urease + 5-Keto-D-gluconate + 0.01% Cycloheximide Arbutin + Growth at 2>TC + Ethylamine v 60% Glucose + Co-Q: 9 (Yamada and Banno 1984b). Mol% G + C: 52.8 (7;^), type strain (CBS 5922); 51.2 (HPLC), IFO 10197. Xylose in cells: Absent.

Origin of the strains studied: IFO 1843 (CBS 5922), groin of a man with seborrheic eczema, C.E. Sonck; IFO 10196 (CBS 8119), air in bakery, D. Swinne; IFO 10197 (CBS 8121), flour, D. Swinne. Type strain: CBS 5922. 107.2. Sterigmatomyces halophilus Fell (1966) Synonyms: Sterigmatomyces halophilus Fell var. indicus Fell (1966) Sterigmatomyces indicus (Fell) Fell (1970a)

Growth in malt extract: After 3 days at room temperature, the cells are spherical to ovoidal, (2-7) x (3ll)|Jim, with one to ten short conidiogenous stalks, 0.5x(l-3)|im (Fig. 430). New cells (conidia) are formed on the stalks. The conidia can produce secondary stalked conidia with old cells, resulting in short branched chains. Cells are separated by septal formation in the mid-region of the stalks. A light film is produced which develops into powdery islets and after one month there is a heavy white pellicle. A sediment is present. Growth on malt agar: The cell morphology is similar to that in malt extract. The cells are varied in size, ( 1 4)x(3-17)fxm, and some are thin and long (127 |im). The stalks are generally short 0.5x(l-3)|im; some are elongated to 26|im. The width of the elongated stalk remains about 0.5 |im. The streak is chalky-white, pasty with a dry granular surface, and the border is irregular to

Fig. 430. S halophilus, IFO 1488. After 48 hours at 25°C on malt extract. Scanning electron micrograph. Bar= 1 fxm.

lobate. Colonies may develop that are smooth, glistening or dull and with an entire margin. Dalmau plate culture on corn meal agar: Pseudomycelium and true mycelium are absent. Short branched chains of cells may be produced. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Rafifinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

V V

V

+ V

-

+ V

+/w +

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

w/-

-

+/w + + + w/+ +

-

+

-

+ +

-

V Additional assimilation tests and other g[rowt characteristics: 2-Keto-D-gluconate Starch formation + -

+ 5-Keto-D-gluconate Urease + Arbutin 0.01% Cycloheximide + Ethylamine V Growth at 25T + + Growth at SO'^C 60% Glucose Co-Q: 9 (Yamada and Banno 1984b). Mol% G + C: 54.9-55.2, 4 strains (Fell et al. 1984a); 55.6 (HPLC), IFO 10201. Xylose in cells: Absent.

Origin of the strains studied: IFO 1488 (CBS 4609), atmosphere, B. Ojeda; IFO 1844 (CBS 5628) type strain ofS. indicus, Indian ocean, J.W. Fell, U.S.A.; IFO 10198 (CBS 5449), keloid blastomycosis, C. da Silva Lacaz; IFO 10119 (CBS 5632), sea water, J.W. Fell, U.S.A.; IFO 10200 (CBS 6780), soil, W. Gams, Netherlands; IFO 10201 (CBS 5629), sea water, J.W. Fell, U.S.A; IFO 10202 (CBS 5631), sea water, J.W. Fell, U.S.A. Type strain: CBS 4609 (IFO 1488). Comments on the genus Vegetative cells produce short stalks terminally developing only one bud (conidium), which is separated at the mid-point of the stalk. The coenzyme Q system is mainly Co-Q 9. These characteristics clearly distinguish Sterigmatomyces from Fellomyces and Kurtzmanomyces. S. indicus was previously separated from S. halophilus on the basis of nitrate utilization. However, Kurtzman (in Fell et al. 1984a) and Kurtzman (1990a) considered that S. indicus is synonymous with S. halophilus, since the two species exhibited 100% DNA reassociation. Yamada et al. (1986a) supported this idea by a comparison of electrophoretic enzyme patterns.

Vic. Descriptions of anamorphic basidiomycetous genera and species

846

108. Sympodiomycopsis Sugiyama, Tokuoka & Komagata J. Sugiyama and S.-O. Suh Diagnosis of the genus Colonies on malt agar are dull cream-colored. Asexual reproduction is principally enteroblastic-annellidic and rarely holoblastic-sympodial. Vegetative cells are obclavate or obovoid and true mycelium is sometimes developed. Ascospores, teliospores, ballistospores, and sterigmatospores have not been observed. Sugars are not fermented. The following tests are positive: extracellular DNase, urease and diazonium blue B. Xylose is present in trace amounts in the cells. The major ubiquinone system is Q-10. Type species Sympodiomycopsis paphiopedili Sugiyama, Tokuoka & Komagata Species accepted 1. Sympodiomycopsis paphiopedili Sugiyama, Tokuoka & Komagata (1991) Systematic discussion of the species 108.1. Sympodiomycopsis paphiopedili Sugiyama, Tokuoka & Komagata (1991) Growth in 5% malt extract: After 3 days at 25°C, the cells vary from ovoid to elongate, sometimes subglobose, (4-ll)x(2-6)jim, occurring singly, in pairs or in short chains, and reproducing principally by enteroblasticannellidic, or rarely, by holoblastic-sympodial budding (Figs. 431,432).

hyaline, smooth, thin-walled, septate, branched, l-2|Jim wide, rarely 5 jJim wide, and often torulose. Ascospores, teliospores, ballistospores and sterigmatospores have not been observed. Fermentation: absent.

Growth on 5% malt extract agar: After 3 days at 25°C, the streak culture is dull and cream-colored; the surface is smooth, and colony texture is soft and slightly mucoid. Dalmau plate culture on corn meal agar: After 14 days at 25°C, true mycelium is sometimes formed. Mycelium is composed of hyphae which are

Fig. 431. 5. paphiopedili, lAM 13459. (A)-(B) In malt extract after 47 days. (C) On com meal agar after 4-25 days. Undifferentiated hyphae with terminal, intercalary or scattered conidiogenous cells; some of these bear 3 or more conidia in sympodial order.

Fig. 432. S. paphiodedili, TEM micrographs. (A) Enteroblastic-annellidic conidiogenesis in young yeast cells. (B) Bud scars at the conidiogenous tip. Arrrows indicate multilayered cell wall of the parent cell. (C) Successive conidiogenesis occurs at the newly developed apex. Bar=l |im.

108. Sympodiomycopsis Sugiyama, Tokuoka & Komagata /J. Sugiyama and S.-O. Suh

Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ w + + + + + w + + + w w + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n + +

847

Garden of the University of Tokyo, Japan (Sugiyama et al. 1991). Type strain: lAM 13459 (CBS 7429).

Comments on the genus Sympodiomycopsis paphiopedili is usually dominant as a yeast morph, although it is associated with a hyphal + morph. Sugiyama et al. (1991) considered that S. pa+ + phiopedili is basidiomycetous because of the following characteristics: positive reaction for urease, DNase and n diazonium blue B color tests, Q-10 ubiquinone system, w relatively high G + C content, and a basidiomycetous type + of cell wall ultrastructure (Fig. 432B). + Morphologically, S. paphiopedili is similar to Symn podiomyces parvus Fell & Statzell (1971), which is + characterized by a yeast morph and inconspicuous hyphal n + morph. The mode of conidiogenesis of these two genera is superficially similar. However, Sympodiomyces parvus Additional assimilation tests and other growth is considered to be an ascomycetous yeast by van der characteristics: Wak and Hopsu-Havu (1976) and Fell (1984b) because of Starch formation Extracellular DNase + negative urease and diazonium blue B color reactions, and Urease w Growth at 3 7 T a cell wall ultrastructure typical of ascomycetous yeasts. Co-Q: 10 (Sugiyama et al. 1991). The septal pore ultrastructure ofS. paphiopedili resembles Mol% G + C: 56.3 (T^: Sugiyama et al. 1991). Xylose in the cells: Present in trace amounts (Sugiyama et al. 1991). that found in members of the Ustilaginales (Suh et al. 1993a). The 18S rDNA sequence-based tree also shows Origin of the strain studied: Orchid (Paphiopedilium S. paphiopedili to be phylogenetically close to Tilletia primurinum) nectar collected at the Koishikawa Botanic caries, SL smut fungus (Suh and Sugiyama 1994).

-

848

Vic. Descriptions ofanamorphic basidiomycetous genera and species

109. Tilletiopsis Derx ex Derx T. Boekhout Diagnosis of the genus Hyphae are regularly branched, narrow, septate, hyaline, monokaryotic, usually partly lysed, and with retraction septa; septal pores are micropore-like. Ballistoconidia are bilaterally symmetrical, allantoid, falcate or cylindrical, and formed on sterigmata. Chlamydospores are sometimes present and hyaline or pigmented. Clamp connections are absent. Colonies are cream-colored, pinkish-cream, pinkish-yellow, yellow-brown or brown. Diazonium blue B and urease reactions are positive. Xylose is absent from whole-cell hydrolyzates. Major ubiquinone is Q-10. Starch-like compounds are not produced. Type species Tilletiopsis washingtonensis Nyland Species accepted 1. Tilletiopsis albescens Gokhale (1972) 2. Tilletiopsisflava(Tubaki) Boekhout (1991) 3. Tilletiopsis fulvescens Gokhale (1972) 4. Tilletiopsis minor Nyland (1950) 5. Tilletiopsis pallescens Gokhale (1972) 6. Tilletiopsis washingtonensis Nyland (1950) Key to species See Table 94. 1. 2(1). 3(1). 4(3). 5(4).

a b a b a b a b a b

Inositol and a-methyl-D-glucoside assimilated; vitamins not required; colonies with considerable expansion growth -^ 2 Inositol and a-methyl-D-glucoside not assimilated; vitamins required; colonies with limited expansion growth -^ 3 Colonies whitish, usually with hyaline droplets on the surface; mol% G + C 55-59 T. albescens: 848 Colonies whitish-cream to pale grayish-cream, without droplets on the surface; mol% G + C 42^6 T. pallescens: 851 L-Sorbose assimilated; colonies pale yellow-brown, ochraceous or brown, firm -^ 4 L-Sorbose not assimilated; colonies pinkish, soft T. washingtonensis: p. 852 Galactose and melezitose assimilated —» 5 Galactose and melezitose not assimilated T. flava: 849 Fusiform blastoconidia forming acropetal chains; mol% G + C 66-68 T. fiilvescens: 850 Fusiform blastoconidia rarely forming acropetal chains; mol% G + C 55-57 T. minor: p. 851 Table 94 Key characters of species in the genus Tilletiopsis Assimilation

Species Galactose

L-Sorbose

Lactose

Melezitose D-Gluconate

Inositol

Growth in vitamin-free medium

Mol%G + C

Tilletiopsis albescens

+

+

+

+

+

+

+

55-58.5(-63.5)

T flava

-

+

-

-

-

-

-

63

T. fldlvescens

+

V

+

+

V

T minor

+

V

+

+

V

T pallescens

V

+

V

+

V

V

+

42-45.5

T washingtonensis

V

-

-

+

+

-

-

66.5-70

Systematic discussion of the species 109.1. Tilletiopsis albescens Golihale (1972) Growth on 5% malt extract agar: After 5 days at IT'^C, hyphae are regularly branched, narrow, with cells measuring (10-55)x( 1.5-3.5) |im, and with retraction

66.5-68 55-57

septa (Fig. 433). Colonies are tough, flat, glabrous or pruinose, dull, whitish-cream, and with an eroded margin. Growth on the surface of assimilation media: A ring and a thick film are formed.

109. Tilletiopsis Derx ex Derx / T. Boekhout

849

Dalmau plate culture on morphology agar: After 7 days at 17°C, hyphae are abundantly formed. Inflated cells with refractive contents occur and measure (2040)X(3.0-6.0) (im. Chlamydospores occur intercalarily or terminally, are subglobose, ellipsoidal or cylindrical, and are solitary or catenate, (13-20)x(5.0-15.0)|im. Aerobic growth is whitish to yellowish-cream, dull, flat, frequently somewhat raised in the center and the margin eroded.

Additional assimilation tests and other growth characteristics:

Formation of ballistoconidia: Ballistoconidia form on sterigmata and are allantoid, falcate or cylindrical, (7.016.0)x(1.0^.0)!im(Fig. 433).

Origin of the strains studied: CBS 608.83 (ATCC 24343, UBC 926, YK 801), sewage, W.B. Cooke, Cincinnati, Ohio, USA; CBS 370.85, barley powdery mildew culture, J.P. Skou, Denmark; CBS 361.86 (IFO 9015, YK 802), origin unknown, Japan; UAMH 5028, lesion of colostomy, I. Weitzman, New York, USA. Type strain: UBC 926.

Fermentation: absent. Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + + + + + + + + w/-

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

-

2-Keto-D-gluconate v Nitrite + 50% (w/w) Glucose Growth at 25''C + Starch formation Growth at 30''C Urease + Co-Q: 10, CBS 608.83, CBS 370.85, (Boekhout et al. 1992a). Mol% G + C: 55.0-58.5 (-63.5), 6 strains (7;^: Boekhout et al. 1992b).

V

+ + +

-

+ + + V

+ + + + + n + +

Comments: Tilletiopsis albescens is morphologically and physiologically similar to T. pallescens. It can be differentiated from this species by colonies that are whiter, and a higher mol% G + C of ca. 55-59. Yamazaki et al. (1985) observed low similarity between electrophoretic enzyme patterns of these species.

109.2. Tilletiopsisflava(Tubaki) Boekhout (1991a) Synonym: Tilletiopsis minor Nyland wm.flavaTubaki (1952)

Growth on 5% malt extract agar: After 5 days at 17°C, hyphae are regularly branched, narrow, with cells measuring (15-100)x(1.5-2.0)(Lim, and with retraction septa (Fig. 434). Colonies are soft or somewhat tough, warty or reticulate, somewhat pruinose, dull, pale yellowish-brown, and with an entire margin. Growth on the surface of assimilation media: A thin film is formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, hyphae are abundantly formed. Inflated cells with refractive contents occur and measure (9.015.0)x(3.0-6.0)(im. Aerobic growth is pale to dark brownish orange-yellow, dull, flat, and with the margin entire or somewhat eroded. Formation of ballistoconidia: Ballistoconidia are aUantoid, falcate or cylindrical, (8.0-20.0)x (1.5-2.5) |im (Fig. 434). Fig. 433. T. albescens, CBS 608.83. Hyphae and ballistoconidia on malt extract agar. Bar = 5 |im.

Fermentation: absent.

Vic. Descriptions of anamorphic basidiomycetous genera and species

850

1991a). Tilletiopsisflavafurther differs from these species by electrophoretic enzyme patterns (Yamazaki et al. 1985), electrophoretic karyotypes and a mol% G + C of ca. 63 (Boekhout et al. 1992a,b). 109.3. Tilletiopsis fulvescens Gokhale (1972) Growth on 5% malt extract agar: After 5 days at 17°C, hyphae are regularly branched, narrow, cylindrical, with cells measuring (15-60) x( 1.0-2.5) |im, and with retraction septa (Fig. 435). Colonies are soft to rather dry, flat, warty or reticulate, glabrous or pruinose, dull, yellowbrown, and with an entire or eroded margin. A brown pigment is exuded into the agar. Growth on the surface of assimilation media (glucose): Islets, a thin film and a sediment are formed. Dalmau plate culture on morphology agar: After 7 days at 17°C, abundant hyphae are formed. Chlamydospores are ellipsoidal, subglobose, cylindrical, and 4.08.0 |im in diameter. Aerobic growth is yellow or yellowbrown, dull, flat, and with the margin entire or eroded. Fig. 434. T. flaua, CBS 401.84. Hyphae and ballistoconidia on malt extract agar. Bar = 5 |im.

Assimilation (17"C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

+ + + + +

-

+ +

-

+ + + + + +

Formation of ballistoconidia: Ballistoconidia are allantoid or falcate, (5.0-16.0)x(l.0-2.5) \im (Fig. 435). Fermentation: absent. Assimilation (17"C:):

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

+

-

+

+ +

-

+ + +

-

n +

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate Nitrite + Growth at 3 0 T 50% (w/w) Glucose + Starch formation Growth at 35°C -

Urease + Co-Q: 10, CBS 401.84 (Boekhout et al. 1992a). Mol% G + C: 63.2, one strain {T^\ Boekhout et al. 1992b).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ + + + + + + + + + + + + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n

V

+ + +

-

+ +

V V

+ +

-

n +

Additional assimilation tests and other g ro\ characteristics: + + 2-Keto-D-gluconate Nitrite 50% (w/w) Glucose Growth at 30"C + Starch formation Growth at 3 5 T + Urease Co-Q: 10, CBS 321.71 (Boekhout et al. 1992b). Mol% G + C: 66.3-68.0, 4 strains (T^: Boekhout et al. 1992a).

Origin of the strain studied: CBS 401.84 (IFO 6833, Origin of the strains studied: CBS 321.71 (ATCC UBC 917, YK 808), leaves of maple {Acer sp.), K. Tubaki, 36405), Oxycoccus microcarpus, Madison, USA; CBS 607.83 (ATCC 24344, UBC 8006, YK 809) leaf of Japan. Forsythia, S. Reid, British Colombia, Canada. Type strain: IFO 6833. Type strain: UBC 8006. Comments: Tilletiopsisflauacan be differentiated from both T fiiluescens and T minor by its inability to grow on galactose, lactose, melezitose and erythritol (Boekhout

Comments: Tilletiopsisfiilvescensis similar to T minor and can be differentiated from the latter species by

109. Tilletiopsis Derx ex Derx / T. Boekhout

851

Formation of ballistoconidia: Ballistoconidia are allantoid or falcate, (6.0-16.0) x (1.0-2.5) [xm (Fig. 436). Fermentation: absent. Assimilation (17**C):

Fig. 435. T. fulvescens, CBS 607.83. Hyphae and ballistoconidia on malt extract agar. Bar = 5 |im.

a higher mol% G + C of ca. 66-68 (Boekhout 1991a, Boekhout et al. 1992b), and softer colonies. Moreover, the electrophoretic enzyme patterns of these species are dissimilar (Yamazaki et al. 1985). 109.4. Tilletiopsis minor Nyland (1950) Growth at 5% malt extract agar: After 5 days at IT^'C, hyphae are regularly branched, narrow, cylindrical, with cells of (10-75)x(l.0-2.0) (im, and with retraction septa. Chlamydospores occurring terminally or intercalarily, and are ellipsoidal, subglobose, fusiform, or cylindrical, (5.0-20.0)x(3.0-7.0)!im (Fig. 436). Colonies are tough, glabrous, pruinose or covered with slender fascicles, shiny or dull, cream to yellow-brown, and with an entire or eroded margin. A red brown pigment is exuded into the agar. Growth on the surface of assimilation media: Islets, a ring and a small sediment are formed. Dalmau plate on morphology agar: After 7 days at 17°C, hyphae are abundantly formed. Chlamydospores are similar to those on malt extract agar. Aerobic growth is\yellowish-brown, dull or somewhat shiny, flat, convex or pulvinate, somewhat irregular, and with an entire or somewhat eroded margin.

Fig. 436. T. minor, CBS 543.50. (A) Chlamydospores on malt extract agar. (B) Ballistoconidia on morphology agar. Bar = 5 ^im.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + + + + + + + + + + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate v Nitrite v 50% (w/w) Glucose Growth at 2 5 ^ + Starch formation Growth at 30*'C v Urease + Growth at 35°C Co-Q: 10, CBS 543.50, CBS 346.33 (Boekhout et al. 1992b). Mol% G + C: 55.2-56.9, 12 strains {T^: Boekhout et al. 1992a).

Origin of the strains studied: CBS 346.33 (ATCC 36406), origin unknown, H.G. Derx; CBS 543.50 (ATCC 10764, IMI 56590, YK 805), from leaves, G. Nyland, Washington, USA; CBS 440.61, leaves of Taraxacum officinale, Rothamsted, UK; CBS 264.82, powdery mildew, T. Hijwegen, Netherlands; CBS 604.83 (IFO 6904, UBC 915, YK 807), leaves, K. Tubaki, Tokyo, Japan: UAMH 2678, origin unknown, D. Westlake. Type strain: CBS 543.50. Comments: Tilletiopsis minor is an inhabitant of the phyllosphere. It has also been isolated from such diverse sources as air, industrial plants and medical specimen (see Boekhout 1991a). Reduction of growth of mildew by T minor was observed under certain environmental conditions (Hijwegen 1986). Tilletiopsis minor is characterized by dull, brownish, and somewhat pruinose colonies, which show limited expansion growth. Tilletiopsisfiilvescens,another species with these characteristics, differs by a higher mol% G + C of ca. 66-68. CBS 604.83 differs from other strains of T minor by assimilation of erythritol (Boekhout 1991a), electrophoretic enzyme patterns (Yamazaki et al. 1985) and somewhat different karyotypes (Boekhout et al. 1992a). 109.5. Tilletiopsis pallescens Golihale (1972) Growth on 5% malt extract agar: After 5 days at \TC, hyphae are regularly branched, narrow, cylindrical.

852

Vic. Descriptions of anamorphic basidiomycetous genera and species

with cells of (20-80)x(l.5-3.0)^m, and with retraction septa. Chlamydospores occur terminally or intercalarily and are catenate or single, subglobose, ellipsoidal or cylindrical, (10-50)x(3.0-15.0)|im. Colonies are tough, flat, somewhat ridged or pustulate in the center, covered with slender fascicles, pale yellowish-brown or cream, and with an eroded margin.

Additional assimilation tests and other growth characteristics:

Growth on the surface of assimilation media (glucose): A ring, islets and a film are formed.

Origin of the strains studied: CBS 606.83 (ATCC 24345, UBC 8007, YK 810), fruit-body of Sirobasidium, Shamoda, Japan; CBS 162.85, gall of Clitocybe odorata, H.A. van der Aa, Netherlands; CBS 364.85, CBS 367.85, CBS 368.85, all from powdery mildew cultures, J.P. Skou, Denmark; CBS 365.85 (ATCC 36535), powdery mildew, H.C. Hoch and R. Provvidenti, USA; CBS 438.90 (ATCC 66528), powdery mildew, A.L. Klecan, S. Hippe and S.C. Somerville, Michigan, USA. Type strain: UBC 8007.

Dalmau plate culture on morphology agar: After 7 days at 17°C, hyphae are abundantly formed. Chlamydospores are similar to those formed on malt extract agar. Aerobic growth is whitish, dull, flat, frequently with the center somewhat wrinkled or pustulate, pruinose, and with slender tapering fascicles, and an eroded margin. Formation of ballistoconidia: Ballistoconidia are allantoid, falcate to cylindrical, (6.5-30.0)x(l.5^.0)|im (Fig. 437). Fermentation: absent. Assimilation (17**C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

2-Keto-D-gluconate v Nitrite v 50% (w/w) Glucose Growth at 25"C + Starch formation Growth at 30''C v Urease + Growth at 35"C Co-Q: 10, CBS 606.83, CBS 369.85 (Boekhout et al. 1992b). Mol% G + C: 4 2 ^ 5 . 5 , 16 strains {T^\ Boekhout et al. 1992a).

Comments: Tilletiopsis pallescens is similar in many aspects to T. albescens, but it can be differentiated from this species by colony appearance and a lower mol% G + C of ca. 42-45.5. Tilletiopsis pallescens is frequently isolated from other fungi, and has been reported to antagonize powdery mildews (Hoch and Provvidenti 1979, Hijwegen 1988, Klecan et al. 1990). Karyotypes of European strains, isolated from powdery mildew, were found to be similar, whereas the remaining strains showed considerable variation (Boekhout et al. 1992a). 109.6. Tilletiopsis washingtonensis Nyland (1950) Synonyms: Tilletiopsis cremea Tubaki (1952) Tilletiopsis lilacina Tubaki (1952)

Growth on 5% malt extract agar: After 5 days at \TC, hyphae are regularly branched, narrow, with cells of (20-100)x(l.0-3.0) |im, and with retraction septa (Fig. 438). Chlamydospores occur terminally or intercalarily and are subglobose, ellipsoid or cylindrical, and frequently catenate, (6.0-35.0)x(2.5-10.0)[xm. Colonies are soft, butyrous flat, usually glabrous, shiny or dull, yellowish-cream or pale pinkish yellow-brown, and with the margin eroded. Growtli on the surface of assimilation media (glucose): A ring, film and a sediment are formed. Dalmau plate on morphology agar: After 7 days at \TC, hyphae are abundantly formed. Chlamydospores are similar to those formed on malt extract agar. Aerobic growth is pale pinkish-cream, dull or shiny flat, pustulate, ridged or reticulate, and with the margin entire, straight or lobate.

Fig. 437. T. pallescens, CBS 162.85. BaUistoconidia on malt extract agar. Bar = 5|im.

Formation of ballistoconidia: Ballistoconidia are formed singly or in small groups, and are allantoid, falcate or cylindrical, (8.0-24.0)x( 1.0-3.5) ^im (Fig. 438). Fermentation: absent.

109. Tilletiopsis Derx ex Derx / T. Boekhout

853

Assimilation (17»C): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ V

-

+ + V

+

-

V

+ +

-

+ + + + +

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

n

-

V

+ + V

-

+ + V V

+ + + +

-

n +

-

growth

2-Keto-D-gluconate Nitrite + 50% (w/w) Glucose Growth at 25T + Starch formation Growth at 30''C v Urease + Growth at 35°C Co-Q: 10, CBS 544.50, CBS 605.83 (Boekhout et al. 1992b). Mol% G + C: 66.5-70.0, 18 strains {T^\ Boekhout et al. 1992a).

Origin of the strains studied: CBS 544.50 (ATCC 36489, YK 803), leaves of Rubus idaeus, G. Nyland, Washington, USA; CBS 603.83 (IFO 6832, UBC 925, YK 811), leaves, K. Tubaki, Japan; CBS 605.83 (IFO 6831, NI 3113, UBC 912, YK 809), leaves, K. Tubaki, Japan; UAMH 1738, authentic strain from G. Nyland, Washington, USA. Type strain: CBS 544.50. Comments: Tilletiopsis washingtonensis seems to be a common inhabitant of the phyllosphere (Brady 1960, Pady 1974, Tubaki 1952). Nyland (1950) considered T. washingtonensis to be identical with Derx's (1948) Tilletiopsis species 4. Tilletiopsis washingtonensis, T. cremea and T lilacina are considered conspecific because of morphological, physiological, and biochemical similarities (Boekhout 1991a). The consistency of the colonies, considered an important taxonomic criterion by Tubaki (1952), seems of insignificant value. Considerable heterogeneity was observed with respect to electrophoretic

Fig. 438. T. washingtonensis, CBS 544.50. Hyphae and ballistoconidia on morphology agar. Bar = 5 ^im.

enzyme (Yamazaki et al. 1985) and karyotype patterns (Boekhout et al. 1992a). Comments on the genus The name Tilletiopsis was published by Derx (1930). This author failed to publish a generic definition or to correctly describe the species (Derx 1930, 1948). Nyland circumscribed the genus by designating T washingtonensis Nyland as neotype. Anamorphs of Tilletiales, e.g., Entyloma, Melanotaenium and Tilletia, and probably species belonging to other genera as well, are morphologically similar to Tilletiopsis (Boekhout 1991a). Therefore, Tilletiopsis was regarded to be phylogenetically related to the Tilletiales (Boekhout et al. 1992b).

854

Vic. Descriptions of anamorphic basidiomycetous genera and species

110. Trichosporon Behrend E. Gueho, M.Th. Smith and G.S. de Hoog Diagnosis of the genus Colonies are cream-colored, moist or dry, and with or without a white, farinose covering. True mycelium is present; pseudomycelium is absent. Arthroconidia are usually abundant; lateral, clavate conidia also may be present. Appressoria, sarcinae, fusiform giant cells and endoconidia are occasionally present. Hyphal septa are mostly with dolipores which may be with or without vesicular or tubular parenthesomes. Sexual reproduction is absent. Fermentation is negative. The Diazonium blue B reaction is positive. Urea is hydrolyzed. Coenzyme Q-9 or Q-10 are formed. Xylose is present in whole-cell hydrolyzates. Type species Trichosporon ovoides Behrend Species accepted 1. Trichosporon aquatile Hedrick & Dupont (1968) 2. Trichosporon asahii Akagi ex Sugita, Nishikawa & Shinoda (1994) 3. Trichosporon asteroides (Rischin) Ota (1926) 4. Trichosporon brassicae Nakase (1971) 5. Trichosporon coremiiforme (M. Moore) Gueho & M.Th. Smith (1992) 6. Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota (1926) 7. Trichosporon dulcitum (Berkhout) Weijman (1979) 8. Trichosporon faecale (Batista & Silveira) Gueho & M.Th. Smith (1992) 9. Trichosporon gracile (Weigmann & Wolff) Gueho & M.Th. Smith (1992) 10. Trichosporon inkin (Oho ex Ota) do Carmo-Sousa & van Uden (1967) 11. Trichosporon jirovecii Fragner (1969) 12. Trichosporon laibachii (Windisch) Gueho & M.Th. Smith (1992) 13. Trichosporon loubieri (Morenz) Weijman (1979) 14. Trichosporon moniliiforme (Weigmann & Wolff) Gueho & M.Th. Smith (1992) 15. Trichosporon montevideense (Aciole de Queiroz) Gueho & M.Th. Smith (1992) 16. Trichosporon mucoides Gueho & M.Th. Smith (1992) 17. Trichosporon ovoides Behrend (1890) 18. Trichosporon pullulans (Lindner) Diddens & Lodder (1942) 19. Trichosporon sporotrichoides (van Oorschot) van Oorschot & de Hoog (1981) Key to species See Table 95. 1.

a b 2(1). a b 3(2). a b 4(2). a b 5(4). a b 6(5). a b 7(6). a b 8(7). a b 9(7). a b 10(6). a b

Growth with nitrate Absence of growth with nitrate —> 2 Growth with creatinine —> 3 Absence of growth with creatinine —> 4 Growth at 30°C Absence of growth at 30°C Growth at 30°C -> 5 Absence of growth at 30*'C Growth with erythritol —> 6 Absence of growth with erythritol —^ 17 Growth with melibiose -^ 7 Absence of growth with melibiose -^ 10 Growth with galactitol -^ 8 Absence of growth with galactitol -^ 9 Growth with glucono-6-lactone Absence of growth with glucono-6-lactone Growth with glucono-6-lactone; species mostly isolated from soil and water Absence of growth with glucono-6-lactone; species mostly isolated from humans Growth with L-arabinitol —> 11 Absence of growth with L-arabinitol -^ 15

T. pullulans:

p. 869

T. laibachii: p. 865 T. sporotrichoides: p. 870 T. dulcitum:

p. 861

T. mucoides: T. Jirovecii: T. moniliiforme: T. cutaneum:

p. 868 p. 864 p. 866 p. 860

Table 95 Key characters of species in the genus Trichosporon Species

Growth

Assimilation a Gal

Rha

Me1

Mlz

Gly

Ery

Ara

Glt

Ino

G6L

Nit

Cre

Gln

Sor

30°C

35°C

37°C

Source 42°C Human

Soil

4

P

Z dulcitum i? fuecale i? gracile

-

-

-

-

+

-

-

-

+

V

-

-

V

V

+

V

-

-

-

i? inkin

V

-

-

i

V

+

-

-

t

V

-

-

V

V

+

t

i

V

i

T jirouecii

i

+

+

+

i

t

+

-

-

-

+

t

+

V

-

-

-

+

V

+ +

+

i

+

V

-

+

+

i

+

-

-

-

-

+

+

-

-

t

V

i

i

i

+

-

-

+

V

-

-

V

V

+

V

-

-

-

t t

+ + +

i

i

-

i

i

T monteoideense

i

-

i? mucoides

+

i

i? oooides T pulluluns

+

T sporotrichoides

T Iaibachii

i? loubieri 7: moniliiforme

-

-

V

-

+

-

+

+ + +

t

t

-

-

i

t

-

V

+

-

-

V

-

t

i

-

-

t

+

t

t

+

+

+ +

+

+

+

-

-

+

t

i

+

i

-

+

i

-

V

V

+

-

-

t

V

-

-

V

V

+

i

V

-

i

i

V

t

V

V

+

-

-

+

t

-

V

-

-

-

-

-

-

+

+

+

i

t

-

-

-

+

+ +

-

-

i

+

i

-

-

-

-

-

+

t

Abbreviations: Gal, galactose; Rha, L-rhamnose; Mel, melibiose; Mlz, melezitose; Gly, glycerol; Ery, erythritol; Ara, L-arabinitol; Glt, galactitol; Ino, inositol; GbL, glucono-b-lactone; Nit, nitrate; Cre, creatinine; Gln, D-ghICOSamiIIe, Sor, L-sorbose. Human, primary source is human; soil, primary source is soil and water.

a

h Q

5

P

856 11(10). a b 12(11). a b 13(12). a b 14(11). a b 15(10). a b 16(15). a b 17(5). a b 18(17). a b 19(18). a b 20(19). a b 21(19). a b

Vic. Descriptions of anamorphic basidiomycetous genera and species Growth with glucono-6-lactone -^ 12 Absence of growth with glucono-6-lactone —> 14 Growth with D-glucosamine -^ 13 Absence of growth with D-glucosamine Growth with L-sorbose Absence of growth with L-sorbose Growth with D-glucosamine Absence of growth with D-glucosamine Growth with inositol and at 35''C -^16 Absence of growth with inositol and at 35°C Growth with L-rhamnose Absence of growth with L-rhamnose Growth at 42''C Absence of growth at 42''C -^ 18 Growth at 3TC Absence of growth at 37''C -^ 19 Growth with melezitose -^ 20 Absence of growth with melezitose -^ 21 Growth with melibiose, no growth at 35°C Absence of growth with melibiose, growth at 35°C Growth with D-galactose, absence of growth with glycerol Absence of growth with D-galactose, growth with glycerol

Systematic discussion of the species 110.1. Trichosporon aquatile Hedrick & Dupont (1968) Growth on Sabouraud's glucose agar: After 10 days at 20-22''C, the colonies are pale cream-colored, mat, smoothly cerebriform or volcano-shaped, odorless, and 6-8 mm in diameter. Hyphae are flexuose, frequently branched at wide angles and finally disarticulating into narrow arthroconidia of variable length; terminal conidia are often clavate, 3x(6-14)(im (Fig. 439). Fermentation: absent.

p. 859 p. 857 p. 862 p. 857 p. 858

T. coremiiforme: T. asahii: T. faecalelT. asahii'. T. asahiilT. asteroides: T. asteroides: T. aquatile: T. ovoides: T. inkin: T. loubieri:

p. 856 p. 869 p. 863 p. 866

T. asahii:

p. 857

T. multisporum, see under T. laibachii: p. 865 T. montevideense: p. 867 T. brassicae: p. 859 T. gracile: p. 862

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + + + +

V

-

+ + + V

+

-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+

-

+

-

+ + + + + +

-

n

-

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate + L-Lysine + 5-Keto-D-gluconate + 50% Glucose + V Glucuronate 10% NaCl/5% glucose + + + Arbutin Urease Xylitol Nitrite L-Arabinitol 0.01% Cycloheximide + 0.1% Cycloheximide + Glucono-6-lactone Cadaverine + Growth at 30°C + Creatinine Growth at 35°C Ethylamine + Co-Q: 9, CBS 5973 and 5988 (Kara et al. 1989, Gueho et al. 1992b). Mol% G + C: 62.9-62.4, CBS 5973 and 5988 {T^: Gueho et al. 1992b); 64.2, CBS 5973 (BD: Gueho et al. 1984).

Origin of the strains studied: CBS 5973, water, ex NRRL; CBS 5988, water, Hedrick. Type strain: CBS 5973. Fig. 439. T. aquatile, CBS 5988. Flexuous hyphal cells with clavate conidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 (im.

Comments: The species is morphologically characterized by flexuose hyphae which are often branched at right angles. With the exception of erythritol, most higher

110. Trichosporon Behrend /E. Gueho, M.Th. Smith and G.S. de Hoog

857

alcohols are not assimilated. The species shows no growth with L-sorbose and inositol.

CBS 5286 and 20 additional strains (7;^: Gueho et al. 1992b); 59.9, CBS 2530 (BD: Gueho et al. 1984); 59.8, CBS 2479, CBS 2939, CBS 4829 (HPLC: Sugita et al. 1994).

110.2. Trichosporon asahii Akagi ex Sugita, Nishikawa & Shinoda (1994)

Origin of the strains studied: CBS 2479, nail of patient with psoriasis, Ota, type strain of T. asahii; CBS 2497, shrimp, Phaff, type strain of T. cutaneum var. peneaus; CBS 2530, mouse inoculated with pus, Ciferri, type strain of T. infestans; CBS 4829, human feces, Batista, type strain of T. figueirae; CBS 5286, skin lesion, Batista, type strain of T. loboi; blood (6), urine (2), lymphoma (2), mare uterus (1), animal white piedra (2), inflamed gland (1), tofu cake (1); TIMM 1318, SHP patient's environment, Ando. Type strain: CBS 2479.

Synonyms: Trichosporon asahii Akagi (1929) nom. inval. IProteomyces infestans Moses & Vianna (1913) ISporotrichum infestans (Moses & Vianna) Sartory (1923) IMycoderma infestans (Moses & Vianna) da Fonseca & de Area Leao (1929) ^Trichosporon infestans (Moses & Vianna) Ciferri & Redaelli (1935) IGeotrichum infestans (Moses & Vianna) Brumpt (1936) 1 Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota var. infestans (Moses & Vianna) Diddens & Lodder (1942) Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota var. peneaus Phaff, Mrak & Williams (1952) Trichosporon figueirae Batista & Silveira (1960) Trichosporon loboi Batista, Campos & Oliveira (1963)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are 16-24 mm in diameter, white, farinose at the center, with a wide, dry, often finely zonate margin with deep transverse fissures. Odor is lacking or faintly cheese-like. Arthroconidia are abundant, rectangular, mostly 2-3 ^im wide, and with rounded ends, (3^)x(4-7)|im (Fig. 440). Lateral conidia are absent. Appressoria are absent.

O

Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + L-Lysine 5-Keto-D-gluconate + 50% Glucose Glucuronate + 10% NaCl/5% glucose Arbutin + Urease Xylitol V Nitrite L-Arabinitol + 0.01% Cycloheximide Glucono-6-lactone V 0.1%) Cycloheximide Cadaverine + Growth at 30T Creatinine Growth at 37T Ethylamine + Growth at 42T Co-Q: 9, CBS 2479, CBS 2530, CBS 4829 and 6 additional strains (Hara et al. 1989, Gueho et al. 1992b, Sugita et al. 1994). Mol% G + C: 57.8-58.7, CBS 2479, CBS 2497, CBS 2530, CBS 4829,

Fig. 440. T asahii, CBS 561. Disarticulating hyphae with liberated, cubic arthroconidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 |im.

Comments: Fresh isolates may be creamy, attaining their characteristic dry colony appearance only afl;er repeated transfers. The species grows with D-glucosamine and L-arabinitol but not with raffinose. Physiologically it cannot be distinguished from T. asteroides. Trichosporon asahii is close to T ovoides and T inkin, but differs by the absence of appressoria and by its ecological preferences. Physiologically it can be recognized from its growth with L-rhamnose and L-arabinitol. The type strain of Trichosporon infestans, CBS 2530, differs by its absence of growth with D-xylose, trehalose and erythritol. However, it proved to be identical to T asahii on the basis of DNA homology and partial rRNA sequences (Gueho et al. 1992b) and is therefore listed as a doubtful synonym. Hara et al. (1989) reported Co-Q 10 for CBS 2530, while Gueho et al. (1992b) found Co-Q 9. Trichosporon asahii is mostly found as a causative agent of disseminated mycoses in patients with impaired

858

Vic. Descriptions of anamorphic basidiomycetous genera and species

natural immunity. Occasionally it causes human or animal white piedra. Only a very few strains are known from nonvertebrate sources. The species in the above sense comprises agents of human mycoses which in the literature are mostly referred to as Trichosporon beigelii. This name was abandoned because the identity of the type specimen could not be established (Gueho et al. 1992a). Causative agents of capital white piedra are now known as Trichosporon ovoides. Gueho et al. (1992a) stressed that T. cutaneum, which has widely been regarded as a synonym of T. beigelii, is in fact another species, having coenzyme Q-10 rather than Q-9. T. cutaneum can be distinguished from T. asahii by the absence of growth at 37°C, but it grows with melibiose and raffinose. Strain TIMM 1318 was designated as the standard for serotype II recognized within the genus (Nishiura et al. 1996). 110.3. Trichosporon asteroides (Rischin) Ota (1926)

Synonyms: Parendomyces asteroides Rischin (1921) Geotrichoides asteroides (Rischin) Langeron & Talice (1932) Proteomyces asteroides (Rischin) Dodge (1935) [nee Monilia asteroides (Castellani) Castellani & Chalmers (1919) = Mycoderma asteroides (Castellani) Brumpt (1927) = Geotrichum asteroides (Castellani) Basgal (1931)]

IProtothecafilamentaArnold & Ahearn (1972) IFissuricellafilamenta(Arnold & Ahearn) Pore, d'Amato & Ajello (1977)

Growth on Sabouraud's glucose agar: After 10 days at 20-22''C, the colonies are undulate, mat, whitish, with a radially furrowed margin and 10 mm in diameter. True hyphae are present and break into one-celled or septate hyphal elements (3^)x(4-15)|im (Fig. 441). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + + + + + + + + + v

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + v v v + v + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + L-Lysine 5-Keto-D-gluconate + 50% Glucose Glucuronate + 10% NaCl/5% glucose Arbutin V Urease Xylitol + Nitrite L-Arabinitol + 0.01% Cycloheximide Glucono-6-lactone 0.1% Cycloheximide Cadaverine + Growth at 30"C Creatinine Growth at 37"C Ethylamine + Growth at 42''C Co-Q: 9, CBS 2481, CBS 6183 and CBS 7623 (Hara et al. 1989, Gueho et al. 1992b). Mol% G + C: 61.5-62.0, CBS 2481, CBS 6183 and 4 additional strains {T^: Gueho et al. 1992b).

Fig. 441. (Top) T. asteroides, CBS 2481. Hyphae disarticulating into arthroconidia. (Bottom) Fissuricellafilamenta,CBS 7624. Meristematic conidiation. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 fxm.

Origin of the strains studied: CBS 2481, human skin, Beintema; CBS 6183, bovine mastitis, van der Walt; CBS 7623 (ATCC 22432), skin, Ahearn, type strain of P.filamenta;blood (1); skin (2); unknown source (1). Type strain: CBS 2481. Comments: The species can be recognized physiologically by growth with D-galactose, L-rhamnose, erythritol and L-arabinitol but not with glucono-8-lactone. It cannot be distinguished physiologically from T asahii, but in contrast, cultures are filamentous with the mycelium locally disarticulating into continuous or septate hyphal elements of variable size. Two strains of Fissuricella filamenta, isolated from human skin, showed DNA homology values around 85% with T asteroides strains (Gueho et al. 1992b). The groups of strains are consequently genetically close, despite the

859

110. Trichosporon Behrend /E. Gueho, M.Th. Smith and G.S. de Hoog

fact that the Efilamenta strains were entirely composed of meristematic cells, while such cells were absent from the strains of T. asteroides. Colonies of E filamenta are dry, finely cerebriform without a differentiated marginal zone, 5-6 mm diameter, finally become brownish, and crack the agar medium. Possibly E filamenta is a meristematic mutant of T. asteroides. The meristematic growth of E filamenta was reminiscent of the sarcinae known in Trichosporon inkin in vivo or obtained after cultivation on media rich in sugar. For this reason, synonymy of the two species was proposed by Pore et al. (1977). However, T. inkin forms appressoria and is unable to grow with L-rhamnose, xylitol and L-arabinitol. 110.4. Trichosporon brassicae Nakase (1971a) Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are whitish, shiny, slightly moist, flat, pustular to cerebriform, and 19 mm in diameter. Hyphae are present and easily fall apart into elements of variable length which are rectangular, (4-8) x (10-30) (Jim (Fig. 442). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other characteristics:

+ + + + + + + + + n -

growth

2-Keto-D-gluconate L-Lysine 50% Glucose 5-Keto-D-gluconate 10% NaCl/5% glucose Glucuronate Urease Arbutin Nitrite Xylitol 0.01%) Cycloheximide L-Arabinitol 0.1% Cycloheximide Glucono-6-lactone Growth at WC Cadaverine Growth at 35T Creatinine Growth at 37°C Ethylamine Co-Q: 9, CBS 6382 (Kara et al. 1989, Gueho et al. 1992b). Mol% G + C: 54.9, CBS 6382 {T^\ Nakase 1971a, T^\ Gueho et al. 1992b); 56.9 (BD: Gueho et al. 1984).

Origin of the strain studied: Nakase. Type strain: CBS 6382.

CBS 6382, cabbage,

Fig. 442. T. brassicae, CBS 6382. Disarticulating hyphae and liberated, partly inflated, hyphal elements. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10|im.

Comments: T brassicae differs from all other Trichosporon species by its inability to assimilate cellobiose. With TEM, no septal pores were found, but septa were often swollen and of spongy texture (Gueho et al. 1992b).

110.5. Trichosporon coremiiforme (M. Moore) Gueho & M.Th. Smith (Gueho et al. 1992b) Synonym: Hemispora coremiiformis M. Moore (1935)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are cream-colored, dry, mat, nearly flat, odorless, and 11 mm in diameter, with a finely fimbriate margin. Hyphae are often present in fine tufts and branchlets; hyphae mainly disarticulate into arthroconidia, 3x(6-10)|im (Fig. 443). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raflfinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + + + + + + v + + -

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + v + v + v + + + + + v + n -

860

Vic. Descriptions of anamorphic basidiomycetous genera and species Mycoderma cutaneum (de Beurmann, Gougerot & Vaucher) Brumpt (1913) Geotrichoides cutaneus (de Beurmann, Gougerot & Vaucher) Langeron & Talice (1932) Geotrichum cutaneum (de Beurmann, Gougerot & Vaucher) de Almeida (1933) Proteomyces cutaneus (de Beurmann, Gougerot & Vaucher) Dodge (1935) Basidiotrichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Kockova-Kratochvilova, Slavikova & Zemek (1977b) nom. nud. Geotrichoides paludosus Smit (1934) Trichosporon minor de Area Leao (1940) nom. nud.

Growth on Sabouraud's glucose agar: After 10 days at 20-22'^C, the colonies are cream-colored, cerebriform, with broad, moist, glistening marginal zones, and 1517 mm in diameter; the odor is cheese-like. Cultures generally consist of disarticulating hyphae, but may revert to yeast growth with subspheroidal budding cells. Arthroconidia are regular, (3^) x (4-8) [im, with lateral, clavate blastoconidia (Fig. 444). Fermentation: absent. Fig. 443. T. coremiiforme, CBS 2482. Disarticulating hyphae, partly in small bundles. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10|im.

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Glucuronate Arbutin Xylitol L-Arabinitol Glucono-6-lactone Cadaverine Creatinine Ethylamine

+ + + + + + + + +

L-Lysine 50% Glucose 10% NaCl/5% glucose Urease Nitrite 0.01% Cycloheximide 0.1% Cycloheximide Growth at BO^C Growth at 37°C Growth at 42*'C

+ + + + + + + + +

Co-Q: 9, CBS 2482 (Kara et al. 1989, Gueho et al. 1992b, Sugita et al. 1994). Mol% G + C: 59.3, CBS 2482 {T^: Gueho et al. 1992b); 60.3, CBS 2482 (HPLC: Sugita et al. 1994).

Origin of the strains studied: CBS 2482, head lesion, Moore, type strain of ^. coremiiformis. Type strain: CBS 2482. Comments: T. coremiiforme has the following unique combination of physiological characters: growth with L-rhamnose, a-methyl-D-glucoside, L-arabinitol and glucono-6-lactone; absence of growth with D-glucosamine and melibiose. Sugita et al. (1994) proposed T. coremiiforme as a variety of T. asahii on the basis of 56% DNA relatedness of respective type cultures (CBS 2482 and CBS 2479). 110.6. Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota (1926) Synonyms: Oidium cutaneum de Beurmann, Gougerot & Vaucher (de Beurmann and Gougerot 1909) Monilia cutanea (de Beurmann, Gougerot & Vaucher) Castellan! & Chalmers (1913)

Assimilation: A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Glucuronate Arbutin Xylitol L-Arabinitol Glucono-6-lactone Cadaverine Creatinine L-Lysine

+ + + + + + + +

Ethylamine 50% Glucose 10% NaCl/5% glucose Urease Nitrite 0.01% Cycloheximide 0.1%) Cycloheximide Growth at WC Growth at SS^'C

Co-Q: 10, CBS 2466, CBS 2480 and CBS 2545 (Kara et al. 1989, Gueho et al. 1992b); 10, CBS 2466 (Yamada et al. 1982). Mol% G + C: 60.7-61.2, CBS 2466, CBS 2480, CBS 2545 {T^\ Gueho et al. 1992b); 63.5, CBS 2466 (BD: Gueho et al. 1984).

Origin of the strains studied: CBS 2466, skin lesion, Langeron; CBS 2480, axillary white piedra, de Area Leao, type strain of Z minor, CBS 2545, activated sludge, Smit, type strain of G. paludosus. Type strain: CBS 2466.

110. Trichosporon Behrend /E. Gueho, M.Th. Smith and G.S. de Hoog

861

Fig. 444. T. cutaneum, CBS 2466. Disarticulating, branched hyphae. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar=10^m. Fig. 445. T. dulcitum, CBS 7608. Hyphae disarticulating into

Comments: Key characters are the absence of growth arthroconidia; hyphae with cymose branching. Slide culture with with galactitol and glucono-6-lactone; however, the species 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 [im. cannot be distinguished easily from T. moniliiforme by differences in growth reactions. T. moniliiforme shows variable growth reactions with glucono-6-lactone. Tricho- Assimilation: + A/^-Acetyl-D-glucosamine + sporon cutaneum is more sensitive to cycloheximide, not Glucose Galactose Methanol growing after two days of incubation with 0.01%, and L-Sorbose V Ethanol V to elevated temperature, not being able to grow at 35°C. Sucrose + + Glycerol The two species differ in their ecology; T. moniliiforme Maltose + Erythritol + Ribitol is restricted to natural sources such as soil. In contrast to Cellobiose + Trehalose Galactitol V the opinion held in the older literature, T. cutaneum sensu + D-Mannitol + stricto appears to be a rare species (Gueho et al. 1992b) Lactose Melibiose D-Glucitol + and mostly occurs as an agent of superficial mycoses of Raffinose + a-Methyl-D-glucoside warm-blooded animals. V Melezitose + Salicin 110.7. Trichosporon dulcitum (Berkhout) Weijman (1979b) Synonyms: Oospora dulcita Berkhout (1923) Geotrichum dulcitum (Berkhout) Windisch (1952) Protendomycopsis domschii Windisch (1965) Schizosaccharomyces zambettakesii Ramirez Gomez (1957) Geotrichum zambettakesii Ramirez Gomez (1959) Endomyces zambettakesii (Ramirez Gomez) Novak & Zsolt (1961)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are cream-colored, moist, flat, with shallow central depressions, and 25-28 mm in diameter. The growth has a strong smell of rotten cauliflower. Large hyphae with cymose branching are often present. Arthroconidia are formed and become subspheroidal to cylindroidal, (5-8)x(10^0)!im (Fig. 445). Fermentation: absent.

Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

-

V

+ + V

+ + V

D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + V

+ n

-

Additional assimilation tests and other g ro^ characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Glucuronate Arbutin Xylitol L-Arabinitol Glucono-6-lactone Cadaverine Creatinine L-Lysine

+ + + + +

-

+ +

-

+

Ethylamine 50% Glucose 10% NaCl/5% glucose Urease Nitrite 0.01% Cycloheximide 0.1 %) Cycloheximide Growth at 25T Growth at WC

+ + + +

-

+

-

+

-

862

Vic. Descriptions of anamorphic basidiomycetous genera and species

Co-Q: 9, CBS 8257, CBS 5785 and CBS 5786 (Hara et al. 1989, Gueho et al. 1992b). Mol% G + C: 54.9-55.4, CBS 8247, CBS 5786 and 2 additional strains {T^: Gueho et al. 1992b); 57.5, CBS 8257 (BD: Gueho et al. 1984).

Origin of the strains studied: CBS 8257, soil, Den Dooren de Jong; CBS 5785, toadstool, Ramirez, type strain of S. zambettakesii; CBS 5786, soil, Windisch, type strain of P. domschii; CBS 7608, loess soil, Nirenberg. Type strain: CBS 8257. Comments: The species is an inhabitant of soil. It is mesophilic with optimum growth at 18°C. Schizosaccharomyces zambettakesii was found to be a synonym on the basis of DNA reassociation (Gueho et al. 1992b), but in contrast to other strains of the species, it does not grow with citrate as sole carbon source. 110.8. Trichosporon faecale (Batista & Silveira) Gueho & M.Th. Smith (Gueho et al. 1992b) Synonym: Endomycopsis mali (Lewis) Dekker var. faecalis Batista & Silveira (1959b)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are cream-colored, moist, irregularly cerebriform at the center, flat or with radial fissures at the margin, and with some areas having a whitish, hispid covering. True hyphae are present, and disarticulate into separate cells measuring 2.5x(3.59.0) ^im (Fig. 446). Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + + + +

-

+

-

+ + + + + + +

/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

-

-

+ + + + V

+ + + + + + + + + n

-

Additional assimilation tests and other growth characteristics:

2-Keto-D-gluconate Ethylamine + + + 5 -Keto-D-gluconate 50% Glucose + + Glucuronate + 10% NaCl/5% glucose + Arbutin + Urease Xylitol Nitrite + L-Arabinitol + 0.01% Cycloheximide + Glucono-6-lactone 0.1%) Cycloheximide + + Cadaverine + Growth at 3 0 ^ + Creatinine Growth at ZTC + L-Lysine Growth at 4 2 ^ + Co-Q: 9, CBS 4828 (Hara et al. 1989, Gueho et al. 1992b, Sugita et al. 1994). Mol% G + C: 58.7, CBS 4828 (7^: Gueho et al. 1992b); 60.0, CBS 4828 (HPLC: Sugita et al. 1994).

Origin of the strain studied: CBS 4828, human feces, Batista, type strain of E. mali var. faecalis. Type strain: CBS 4828. Comments: The species is close to T. ovoides, T. inkin and T. aquatile on the basis of DNA reassociation data (Gueho et al. 1992b), but can be distinguished by its unique combination of physiological characters: assimilation of D-glucosamine, D-arabinose, L-rhamnose, ribitol and glucono-6-lactone but lack of growth with L-sorbose and melibiose. As for T. coremiiforme, Sugita et al. (1994) proposed T. faecale as a variety of T. asahii on the basis of 53% DNA relatedness of respective type cultures (CBS 4828 and CBS 2479). 110.9. Trichosporon gracile (Weigmann & Wolff) Gueho & M.Th. Smith (Gueho et al. 1992b) Synonyms: Oidium gracile Weigmann & Wolff (1909) Oospora gracile (Weigmann & Wolff) Berkhout (1923) Geotrichum gracile (Weigmann & Wolff) Windisch (1952) Geotrichum vanrijiae Saez (1964) Trichosporon lutetiae Saez (1977) Fig. 446. T. faecale, CBS 4828. Hyphae disarticulating into arthroconidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 |im.

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are glassy-whitish, mat and smooth, nearly flat, with slight, shallow depressions at

110. Trichosporon Behrend /E. Gueho, M.Th. Smith and G.S. de Hoog

863

Origin of the strains studied: CBS 8189, sour milk, Bierberg, type strain of Oidium gracile; CBS 5066, frozen chicken, Barnett; CBS 6861, gut of deer {Cervus eldisiamensis), Saez, type strain of T. lutetiae; CBS 8193, from duck (Anas querquedula), Saez, type strain of Geotrichum uanrijiae; from swan (Cygnus olor) (1); from crab-eating raccoon (Procyon cancrivorus) (1). Type strain: CBS 8189. Comments: The species is mostly isolated from animal sources; the type strain of Geotrichum gracile came from sour milk. The species is physiologically characterized by absence of growth with D-galactose, L-rhamnose and a-methyl-D-glucoside (Gueho et al. 1992b). Most strains of T. gracile are dry, while others are usually slimy. 110.10. Trichosporon inkin (Oho ex Ota) do Carmo-

Fig. 447. T. gracile, CBS 8189. Hyphae disarticulating into arthroconidia. Sousa & van Uden (1967) Slide culture with 2% malt extract agar, after 1-2 days at room Synonyms: temperature. Bar= 10 \\m. Microsporum brachytonum Oho (1919) nom. prov. Sarcinomyces inkin (Oho ex Ota) Ota (1926) the center, and measure 29-30 mm in diameter. The Sarcinosporon inkin (Oho ex Ota) King & Jong (1975)

odor is cheese-Hke. True hyphae are present and easily disarticulate into regularly rectangular arthroconidia that measure 3x(4-12)^m (Fig. 447). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v v v + + v v + + v v

A'^-Acetyl-D-glucosamine Methanol Ethanol + Glycerol + Erythritol Ribitol V Galactitol D-Mannitol + D-Glucitol V a-Methyl-D-glucoside Salicin + D-Gluconate + DL-Lactate + Succinate + Citrate + Inositol + Hexadecane n Nitrate Vitamin-free -

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate + 50% Glucose 5-Keto-D-gluconate + 10% NaCl/5% glucose Glucuronate + Urease Arbutin v Nitrite Xylitol V 0.01% Cycloheximide L-Arabinitol 0.1% Cycloheximide Glucono-6-lactone v Growth at 30°C Cadaverine + Growth at 35T Creatinine Growth at 37T L-Lysine + Co-Q: 9, CBS 8189, CBS 8193, CBS 6861 and CBS 7609 (Hara et al. 1989, Gueho et al. 1992b); 9, CBS 6861, CBS 8193 (Sugita et al. 1994). MoI% G + C: 57.6-58.0, CBS 6861, CBS 8189, CBS 8193 and 3 additional strains {T^\ Gueho et al. 1992b); 59.7-60.0, CBS 6861, CBS 8189, CBS 8193 (BD: Gueho et al. 1984); 58.6-58.9, CBS 6861, CBS 8193 (HPLC: Sugita et al. 1994).

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, colonies arefinelycerebriform, often cracking the agar medium, and 9-12 mm in diameter, with a white, farinose covering; a marginal zone is absent. Appressoria are present. Hyphae disarticulate into rectangular arthroconidia, 4x(12-20)|im (Fig. 448). Sarcinae are produced on media rich in sugar. A faint odor is produced. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ v v + + + + + + + + v v + v

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + v + v + v + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5-Keto-D-gluconate Glucuronate Arbutin Xylitol L-Arabinitol Glucono-6-lactone Cadaverine Creatinine L-Lysine

+ + + + v + +

Ethylamine 50% Glucose 10% NaCl/5% glucose Urease Nitrite 0.01% Cycloheximide 0.1% Cycloheximide Growth at WC Growth at 37°C Growth at AT'C

864

Vic. Descriptions of anamorphic basidiomycetous genera and species

110.11. Trichosporon jirovecii Fragner (1969) Synonyms: Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota var. jirovecii (Fragner) Fragner (1970) Trichosporon beemeri Kuttin & Muller (1981)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are whitish, mat, cerebriform at the center with broad, flat margins with narrow but deep radial fissures, and measure 15-16 mm in diameter. Cultures have a faint odor. Hyphae are sterile or disarticulate into irregular arthroconidia, (3-5) x (620) [xm. Endoconidia and chlamydospores (5x6^m) are occasionally present (Fig. 449). Groups of obovoidal, sometimes catenulate conidia form in small clusters laterally at disarticulating hyphae. Fermentation: absent. Assimilation:

Fig. 448. T inkin, CBS 5585. Disarticulating hyphae with appressoria; cylindrical arthroconidia. Slide culture with 2% malt extract agar, after 5-10 days at room temperature. Sarcinae. After 4-5 days on 50% GYA at room temperature. Bar= 10 |xm.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

-

+ + + + + + +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ + + + + + + + + + + + + + n

-

Co-Q: 9, CBS 5585 and 4 additional strains (Gueho et al. 1992b). Mol% G + C: 58.3-59.5, CBS 5585 and 19 additional strains {T^: Gueho et al. 1992b); 61.5, CBS 5585 (BD: Gueho et al. 1984).

Origin of the strains studied: CBS 5585, tinea cruris, do Carmo-Sousa; CBS 7613, anus, Stenderup; CBS 7628, endocarditis; CBS 7629, urine; pubic white piedra (8), peritonitis (1); skin lesion (1). Type strain: CBS 5585. Comments: On media with high sugar contents, the species produces sarcinae, and King and Jong (1975) used this property to define the genus Sarcinosporon. However, close molecular similarity was found between T. inkin, T. ovoides and T. asahii (Gueho et al. 1992b). A diagnostic set of physiological criteria of T. inkin is formed from growth with a-methyl-D-glucoside, erythritol and inositol and absence of growth with L-rhamnose and melibiose. The species is ecologically remarkable because it is restricted to humans and it frequently causes cruric white piedra.

Fig. 449. T jirovecii, CBS 6864. Hyphae with lateral globose conidia; disarticulating hypha. Slide culture with 2% malt extract agar, after 12 days at room temperature. Bar= 10|im.

110. Trichosporon Behrend / E. Gueho, M.Th. Smith and G.S. de Hoog

865

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate 5 -Keto-D-gluconate Glucuronate Arbutin Xylitol L-Arabinitol Glucono-6-lactone Cadaverine Creatinine L-Lysine Co-Q: 10, CBS 6864 and Mol% G + C: 61.0-61.7, 1992b).

+ + + + + + +

Ethylamine 50% Glucose 10% NaCl/5% glucose Urease Nitrite 0.01% Cycloheximide 0.1% Cycloheximide Growth at 30"C Growth at 35°C + Growth at 3TC CBS 6950 (Gueho et al. 1992b). CBS 6864 and CBS 6950 (T^: Gueho et al.

Origin of the strains studied: CBS 6864, human nail, Fragner, type strain of T. jirouecii; CBS 6950, Nile crocodile, Kuttin, type strain of T beemeri. Type strain: CBS 6864. Comments: The species differs from T. mucoides by the absence of growth with glucono-5-lactone and from T. moniliiforme and T. cutaneum by growth with galactitol. 110.12. Trichosporon laibachii (Windisch) Gueho & M.Th. Smith (Gueho et al. 1992b) Synonyms: 1 Trichosporon multisporum Cochet (1940) nom. nud. 1 Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota var, multisporum (Cochet) Lodder & Kreger-van Rij (1952) Endomyces laibachii Windisch (1965)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are white, mat, dry, finely farinose, and with sharp radial fissures that cause lifting of the agar; colonies are 42-46 mm in diameter. Hyphae form lateral, spheroidal conidia that are 4 juim in diameter (Fig. 450). Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + V

-

+ + + V

+ + +

/^/-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

V

+ V V

+ + + + + + + n

-

Fig. 450. T laibachii, CBS 5790. Hyphae with lateral globose conidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= lOjim.

Additional assimilation tests and other jgroy characteristics:

2-Keto-D-gluconate + + Ethylamine 5-Keto-D-gluconate + + 50% Glucose Glucuronate + 10% NaCl/5% glucose + Arbutin + Urease + Xylitol V Nitrite V L-Arabinitol V 0.01% Cycloheximide + 0.1% Cycloheximide Glucono-6-lactone V + Cadaverine + Growth at 30°C + Growth at 35°C Creatinine + L-Lysine + Co-Q: 9, CBS 5790 and 3 additional strains (Kara et al. 1989, Gueho et al. 1992b, Sugita et al. 1994). Mol% G + C: 57.0-57.5, CBS 5790, CBS 2495 and 2 additional strains {T^: Gueho et al. 1992b); 58.8, CBS 2495 (T;^: Gueho et al. 1992b); 58.3, CBS 5790 (HPLC: Sugita et al. 1994).

Origin of the strains studied: CBS 5790, soil, Windisch, type of Endomyces laibachii; CBS 2495, rat droppings, Cochet, authentic strain of T. multisporum; water (1), soil (2). Type strain: CBS 5790. Comments: Judging from DNA reassociation values between 53 and 73%, T. laibachii and T loubieri are closely related, possibly at the level of varieties (Gueho et al. 1992b, Sugita et al. 1994). The taxa can readily be distinguished on the basis of micromorphology and physiology. Fusiform macroconidia are absent from T. laibachii, while small, lateral, ellipsoidal to spheroidal

Vic. Descriptions of anamorphic basidiomycetous genera and species

866

blastoconidia are present. In addition, T. laibachii is able to grow with galactitol, but it fails to grow at 42°C. The authentic strain of T. multisporum, CBS 2495 is close to T. laibachii from molecular comparisons (Gueho et al. 1992b). The taxa nevertheless differ by growth responses to ribitol and creatinine and by the presence of a strong, cauliflower-like scent in cultures of T. multisporum. 110.13. Trichosporon loubieri (Morenz) Weijman (1979b) Synonym: Geotrichum loubieri Morenz (1963)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are white, mat, dry, finely farinose, and with sharp radial fissures that cause lifting of the agar. Colonies are 42-46 mm in diameter. Arthroconidia are present and measure (3-4) x (6-15) |im. In addition to arthroconidia, lateral or intercalary fusiform cells with granular contents are present and measure about 80xl5!im(Fig. 451). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + V

+ + + + + + +

-

+ + + V

+ + +

A^^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside SaHcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

Fig. 451.1 loubieri, CBS 7065. Hypha disarticulating into arthroconidia; fusiform giant cells; branched hypha. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 [im.

+

-

+ + + + + + + + + n

-

Additional assimilation tests and other growth characteristics:

+ 2-Keto-D-gluconate Ethylamine + + 50% Glucose + 5 -Keto-D-gluconate + 10% NaCl/5% glucose + Glucuronate Arbutin + + Urease Nitrite Xylitol V L-Arabinitol + 0.01% Cycloheximide + + 0.1% Cycloheximide + Glucono-6-lactone Cadaverine + Growth at 30°C + Growth at 37T + Creatinine + Growth at 42T + L-Lysine Co-Q: 9, CBS 7065, CBS 7132 (Iiara et al. 1989, Gueho et al. 1992b, Sugita et al. 1994). Mol% G + C: 56.6-56.8, CBS 7065, CBS 7132 {T^: Gueho et al. 1992b); 58.4, CBS 7065 (BD: Gueho et al. 1984); 57.5, CBS 7065 (HPLC: Sugita et al. 1994).

Origin of the strains studied: CBS 7065, cow mastitis, Morenz; CBS 7132, mushroom (Entyloma sp.), de Hoog. Type strain: CBS 7065. Comments: The taxon is characterized by growth at 42''C and assimilation of L-rhamnose. In addition, large, fusiform cells with granular contents are present. 110.14. Trichosporon moniliiforme (Weigmann & Wolff) Gueho & M.Th. Smith (Gueho et al. 1992b) Synonyms: Oidium moniliiforme Weigmann & Wolff (1909) Oospora moniliiformis (Weigmann & Wolff) Berkhout (1923) Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota var. antarcticum Goto, Sugiyama & lizuka (1969)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are cream-colored, slimy at first, but later often dry, tough and with deep but narrow, radial folds. A faint odor is exuded. Arthroconidia are 2 ^m wide and ellipsoidal; lateral conidia are present and measure 2.5x4fxm(Fig. 452). Fermentation: absent.

110. Trichosporon Behrend /E. Gueho, M.Th. Smith and G.S. de Hoog

867

of T. cutaneum var. antarcticum; from water (1), soil (3), pigeon guano (1), chicken run (1), flour (1). Type strain: CBS 2467. Comments: Physiologically the species cannot be distinguished from T. cutaneum on standard growth tests. However, most strains of T. moniliiforme were isolated from soil or water, sometimes in association with bird manure, while T. cutaneum is particularly known from superficial infections in humans. 110.15. Trichosporon montevideense (Aciole de Queiroz) Gueho & M.Th. Smith (Gueho et al. 1992b) Synonyms: Endomycopsis monteuidensis Aciole de Queiroz (1973) Geotrichum robustum Fang, Yen & Yue (1966)

Fig. 452. T. moniliiforme, CBS 2467. Hyphae in small fascicles, with lateral, clavate conidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 ^im.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + v + + + + + + + + + + + v + + v

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+ + + + + + + + + + + + + + n -

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate + 50% Glucose Glucuronate + 10% NaCl/5% glucose Arbutin + Urease Xylitol + Nitrite L-Arabinitol + 0.01% Cycloheximide Glucono-6-lactone V 0.1% Cycloheximide Cadaverine + Growth at SO'^C Creatinine Growth at 35°C L-Lysine + Growth at 37*'C Co-Q: 10, CBS 2467, CBS 5959 and 5 additional strains (Hara et al. 1989, Gueho et al. 1992b). Mol% G + C: 57.8-59.0, CBS 2467, CBS 5959 and 7 additional strains {T^: Gueho et al. 1992b); 60.2, CBS 5959 (BD: Gueho et al. 1984).

Origin of the strains studied: CBS 2467, butter, Bierberg; CBS 5959, Lake Vanda, Sugiyama, type strain

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are whitish, mat, somewhat hispid, strongly transversely folded, centrally coarsely cerebriform, have a citron yellow reverse and measure 2223 mm in diameter. Cultures consist of sterile hyphae or hyphae may disarticulate into irregular arthroconidia, (35)x(6-20)jim (Fig. 453). Endoconidia are occasionally present. Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: 2-Keto-D-gluconate + Ethylamine 5-Keto-D-gluconate + 50% Glucose Glucuronate + 10% NaCl/5% glucose Arbutin + Urease Xylitol + Nitrite L-Arabinitol V 0.01% Cycloheximide Glucono-6-lactone + 0.1% Cycloheximide Cadaverine + Growth at SO^C Creatinine Growth at 35*'C L-Lysine + Growth at 37T Co-Q: 9, CBS 6721 (Gueho et al. 1992b, Sugita et al. 1994). Mol% G + C: 55.1-55.3, CBS 6721, CBS 8261, M9456 {T^: Gueho et al. 1992b); 57.0, CBS 6721, M9456 (HPLC: Sugita et al. 1994, Nishiura et al. 1996).

Vic. Descriptions of anamorphic basidiomycetous genera and species

with smooth margins, which later show narrow radial fissures. The agar adjacent to colonies often becomes cracked. Colonies measure 13-17 mm in diameter. Growth is odorless. Arthroconidia are present; shorter lateral branches ofi;en terminate with clavate conidia measuring 4x8!im(Fig. 454). Fermentation: absent. Assimilation:

Fig. 453. T. monteuideense, CBS 8261. Hyphae, disarticulating into arthroconidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= lOjim.

Origin of tlie strains studied: CBS 6721, water, Aciole de Queiroz; CBS 8261, human feces. Fang. M9456, SHP patient's environment, Ando. Type strain: CBS 6721.

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + + + +

Xylitol L-Arabinitol Glucono-6-lactone Cadaverine Creatinine L-Lysine

+ + + +

-

+ + + + + + +

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

Nitrite 0.01% Cycloheximide 0.1% Cycloheximide Growth at SO^'C Growth at 37''C Growth at 4 2 ^

V

-

+ + + + + + + + + + + + + + n

Comments: The strains available are rather filamentous. The species was originally described as having ascospores (Aciole de Queiroz 1973), but endoconidia may have been misinterpreted as ascospores. Trichosporon monteuideense is physiologically recognizable by its assimilation Additional assimilation tests and other growth of galactose and inability to grow with L-sorbose, characteristics: + + 2-Keto-D-gluconate Ethylamine L-rhamnose, melibiose and erythritol. Strain M9456 was 5 -Keto-D-gluconate + 50% Glucose + designated as the standard for serotype II recognized Glucuronate + + 10% NaCl/5% glucose within the genus (Nishiura et al. 1996). Arbutin + Urease + 110.16. Trichosporon mucoides Gueho & M.Th. Smith (Gueho et al. 1992b) Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are cream-colored, moist and glistening, strongly elevated and become cerebriform

-

+

+ V

+ +

-

Co-Q: 10, CBS 7625 CBS 7616 and CBS 7626 (Gueho et al. 1992b). Mol% G + C: 58.3- 58.8, CBS 7625, TIMM 1573 and 4 additional

Origin of the strains studied: CBS 7625, meningitis, Surmont; CBS 7616, spinal fluid of human patient, Ahearn; CBS 7626, pubic white piedra (AIDS), Fischerman; CBS 7653, sputum (1); skin lesion (1); TIMM 1573, SHP patient's environment, Ando. Type strain: CBS 7625.

Fig. 454. T. mucoides, CBS 7625. Hyphae with swollen terminal cells; liberated arthroconidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= lOjim.

Comments: The species is characterized by the combination of growth with galactitol and at 37°C. Strains of T. faecale may have the same combination of characters, but they are recognized by the absence of growth with L-sorbose. Most isolates are of human origin (Surmont et al. 1990). Strain TIMM 1573 was designated as the standard for serotype II recognized within the genus (Nishiura et al. 1996).

110. Trichosporon Behrend /E. Gueho, M.Th. Smith and G.S. de Hoog

869

110.17. Trichosporon ovoides Behrend (1890)

Synonyms: IPleurococcus beigelii Kiichenmeister & Rabenhorst (Rabenhorst 1867) IZooglea beigeliana Eberth 1873, cited by Redaelli & Ciferri (1941) IHyalococcus beigelii (Kiichenmeister & Rabenhorst) Schroeter (1889) IChlamydatomus beigelii (Kuchenmeister & Rabenhorst) Trevisan (Saccardo 1889) 1Micrococcus beigelii (Kuchenmeister & Rabenhorst) Migula (1900) 1 Trichosporon beigelii (Kuchenmeister & Rabenhorst) Vuillemin (1902) Geotrichum amycelicum Redaelli & Ciferri (1935)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are white, dry, farinose, irregularly folded with transverse fissures in the margins and reach 10-13 mm in diameter. Rectangular arthroconidia, (3-5)x(4-15)|im, are present (Fig. 455). Appressoria are sparingly present. No odor is detected. Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

V

+ + + V

+

-

V V

-

+ + V V

+ +

A^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ V

+

-

+ V

+ + + + + V

+ n

Additional assimilation tests and other growth characteristics: V

2-Keto-D-gluconate Ethylamine + + 5-Keto-D-gluconate + 50% Glucose + + Glucuronate 10% NaCl/5% glucose + Arbutin + Urease + Xylitol V V Nitrite L-Arabinitol + 0.01% Cycloheximide V Glucono-6-lactone 0.1%) Cycloheximide Cadaverine + Growth at SO^'C + Creatinine Growth at 37°C V L-Lysine Growth at 42T + Co-Q: 9, CBS 7556, CBS 5585 (Gueho et al. 1992b, Sugita et al. 1994). Mol% G + C: 58.3-58.5, CBS 7556, CBS 5585 and 2 additional strains {T^\ Gueho et al. 1992b); 61.7, CBS 5580 (BD: Gueho et al. 1984); 60.1, CBS 7556 (HPLC: Sugita et al. 1994).

Origin of the strains studied: CBS 7556, hair white piedra, Lasagni; CBS 4098, hair, white piedra, de Area Leao; CBS 5580, skin lesion, Pollacci; CBS 7612 (ATCC 10266), white piedra, Miguens. Neotype strain CBS 7556. Comments: Two of the strains studied originated from

Fig. 455. T. ovoides, CBS 7556. Hyphae disarticulating into arthroconidia; terminal appressoria. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10|xm.

human capital white piedra. This clinical picture corresponds well with the original description of T. ovoides (Behrend 1890) of which no material is known to be preserved. CBS 7556 was designated as the neotype strain of this species (Gueho et al. 1992a). This name replaces the widely used but ambiguous name T. beigelii, for which no material nor adequate description is available. T. ovoides is characterized by growth with erythritol and D-mannitol but not with melibiose. It shows close relationships to T. asahii and T. inkin, other Trichosporon species from humans that have the coenzyme Q-9 system. The three species have colonies which, when old, develop a white, farinose covering. T ovoides cannot be differentiated physiologically from T inkin, but DNA reassociations between the two species proved to be low (Gueho et al. 1992b). T ovoides develops appressoria as does T. inkin but has the same marginate colony as T asahii. 110.18. Trichosporon pullulans (Lindner) Diddens & Lodder (1942) Synonyms: Oidium pullulans Lindner (1895) Oospora pullulans (Lindner) Lindau (1907) Oosporidium fuscans Stautz (1931) Monilia pullulans (Lindner) Langeron & Talice (1932) Trichosporon fuscans (Stautz) Buchwald (1939) Basidiotrichosporon pullulans (Lindner) Kockova-Kratochvilova, Slavikova & Zemek (1977b)

870

Vic. Descriptions of anamorphic basidiomycetous genera and species

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are flat, soft, regularly zonate with a fringed margin, initially smooth and cream-colored, later with a whitish, farinose to velutinous covering which becomes tan to somewhat orange colored. Colonies are 19-21 mm in diameter. The odor is faint. Initial budding is enteroblastic, but in older cultures disarticulating hyphae are prevalent, and become ovoidal, or spheroidal to ellipsoidal and measure 9x(9-20)(im (Fig. 456). Fermentation: absent. Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

iV-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

Additional assimilation tests and other growth characteristics: Ethylamine 2-Keto-D-gluconate + Ethylamme v 5-Keto-D-gluconate + 50% Glucose + 10% NaCl/5% glucose Glucuronate + Urease Arbutin + Nitrite Xylitol + 0.01% Cycloheximide L-Arabinitol 0.1% Cycloheximide Glucono-6-lactone + Growth at 25°C Cadaverine v Growth at SO'^C Creatinine L-Lysine v Co-Q: 9, CBS 2532, CBS 2535 and CBS 2540 (Kara et al. 1989, Gueho et al. 1992b); CBS 2532, CBS 2533 (Yamada et al. 1982). Mol% G + C: 56.6-57.3, CBS 2532, CBS 2535 and 4 additional strains {T^: Gueho et al. 1992b); 58.9-59.0, CBS 2540, CBS 2542 (BD: Gueho et al. 1984).

Fig. 456. T. pullulans, CBS 2532. Hyphae with lateral, spherical conidia. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar=10^m.

Comments: T. pullulans is easily recognized by its low optimum temperature for growth (17°C), assimilation of nitrate and absence of growth with lactate. Septal pores seem to be absent (Gueho et al. 1992b). Another character uncommon in the genus Trichosporon is enteroblastic budding. T. pullulans is phylogenetically distinct from the remaining Trichosporon species (Gueho et al. 1992b). 110.19. Trichosporon sporotrichoides (van Oorschot) van Oorschot & de Hoog (1981)i Synonym: Trichosporiella sporotrichoides van Oorschot (1980)

Growth on Sabouraud's glucose agar: After 10 days at 20-22°C, the colonies are cream-colored, Origin of the strains studied: CBS 2532, air, Lindner; dry, mat, finely folded at the center, with a broad, flat CBS 2535, slime flux of chestnut {Castanea sp.), Stautz, outer zone with a fimbriate margin and are 10 mm in type of Oidiumfuscans; beer pipe, (1); sawdust (1); frozen diameter. Cultures exude a strong, cheese-like smell. beef (1); butter (1); slime flux of maple (Acer sp.) (1); Hyphae disarticulate into elongated arthroconidia and form spheroidal lateral conidia that measure 3.5jjim in Antarctic soil (3); nail (1). diameter (Fig. 457). Type strain: CBS 2532.

^ Editors' Comment: Gueho et al. (1992b) incorrectly listed CBS 8245 as the type strain of Trichosporiella sporotrichoides and subsequently followed that listing in the above treatment. According to van Oorschot and de Hoog (1981), the type strain is CBS 671.74 (CBS 8246) collected by J.H. van Emden from soil in Surinam. However, CBS 8245 (CBS 577.77) is an additional strain studied by van Oorschot and de Hoog (1981). Based on nDNA reassociation values, Gueho et al. (1992b) found that CBS 8246 (the type strain of Trichosporiella sporotrichoides) is a synonym of Trichosporon laibachii. They also reported, based on LSU rRNA sequence analysis, that CBS 8245 is a distinct species within the genus, a result confirmed by Fell and Scorzettii (unpublished). Consequently it is the editors' opinion that the above description of CBS 8245 represents a new species and not T sporotrichoides, which is a synonym of T laibachii. This observation came to the attention of the editors late in the editing process, therefore the required revisions were not made.

871

110. Trichosporon Behrend /E. Gueho, M.Th. Smith and G.S. de Hoog

Fermentation: absent. Assimilation:

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + + + + + + +

-

+

-

+ + +

-

+ + +

Additional assi characteristics:

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

+

-

+ +

-

+ + + + + + + + + n

-

Fig. 457. T. sporotrichoides, CBS 8245. Hyphae disarticulating into arthroconidia which swell and may bud further. Slide culture with 2% malt extract agar, after 1-2 days at room temperature. Bar= 10 |im.

atioi1 tests and other growth

+ Ethylamine 2-Keto-D-gluconate + 50% Glucose 5-Keto-D-gluconate + 10% NaCl/5% glucose Glucuronate + Urease Arbutin Nitrite Xylitol + 0.01% Cycloheximide L-Arabinitol + 0.1% Cycloheximide Glucono-5-lactone + Growth at 2 5 ^ Cadaverine + Growth at 30T Creatinine L-Lysine + Co-Q: 9, CBS 8245 (Gueho et al. 1992b). Mol% G + C: 61.5, CBS 8245 (T;^: Gueho et al. 1992b).

+ + + + +

-

+

-

Origin of the strain studied: CBS 8245, soil, Colombia. Type strain: CBS 8245. Comments: CBS 8245 has characteristic lateral conidia and is physiologically recognized by growth with creatinine but not with raffinose. It is similar to T. laibachii but distinguishable by absence of growth with raffinose and galactitol. Comments on the genus In the older literature, Trichosporon was defined largely on the basis of morphological criteria, but the genus has been redefined to comprise only arthroconidial species with a basidiomycetous affinity. rRNA sequencing studies have shown, that the genus is relatively close to Cryptococcus (Gueho et al. 1993). The two genera probably belong to the Tremellales. In addition to a positive diazonium blue B staining reaction, presence of urease and absence of fermentation, the species have variously shaped septal dolipores. In Trichosporon, budding cells are sparse or absent. Some species are filamentous and produce lateral blastoconidia in addition to or occasionally instead of arthroconidia. Such strains have frequently been identified as hyphomycetes. The hyphomycete genus Hyalodendron is probably a synonym of Trichosporon, as it clustered amidst Trichosporon species when compared from partial 26S rRNA sequences (Gueho et al. 1993). Species of ascomycetous affinity are no longer maintained in Trichosporon but have been transferred to Geotrichum. The following three species were described by Lu and Li (1991) as members of Trichosporon but are excluded from the genus due to their ascomycetous affinity: Trichosporon bacangense Lu & Li (reidentified as Saccharomycopsis fibuliger); Trichosporon beijingense Lu & Li (reidentified as Candida fennica); Trichosporon sinense Lu & Li (reidentified as Candida species). The genus Trichosporon was recently revised using a combination of physiological and molecular criteria (Gueho et al. 1992a,b); a review of the clinically significant species was given by Gueho et al. (1994). The genus was found to consist of a large number of closely

872

Vic. Descriptions of anamorphic basidiomycetous genera and species

related species, each with rather speciaHzed ecological requirements. The concept of a limited number of extremely variable species, as maintained in the previous edition of "The Yeasts", was thus refuted. In contrast, the genus Trichosporon now represents a natural grouping of arthrosporous anamorphs of heterobasidiomycetes, among which are likely to be many new species that will require characterization (Sugita et al. 1995). Older taxa for which no type material is known to exist could not be compared in this treatment and are listed below as doubtful taxa: Endomyces rotundus Castellani (1912b) Monilia rotunda (Castellani) Castellani & Chalmers (1913) Oidium rotundatum (Castellani) Castellani & Chalmers (1919) Oospora rotundata (Castellani) Berkhout (1923) Mycoderma rotundatum (Castellani) Brumpt (1927) Myceloblastanon rotundatum (Castellani) Ota (1928) Geotrichum rotundatum (Castellani) Ciferri & Redaelli (1929) Candida rotundata (Castellani) Basgal (1931) Trichosporon rotundatum (Castellani) Puntoni (1935) Endomyces rugosus Castellani (1912b) [nee Mycoderma rugosa Anderson (1917); nee Candida rugosa (Anderson) Diddens & Lodder (1942)] Monilia rugosa (Castellani) Castellani & Chalmers (1913) Hemispora rugosa (Castellani) Castellani & Chalmers (1919) Parendomyces rugosus (Castellani) Ota (1924a) Trichosporon rugosum (Castellani) Ota (1926) Geotrichum rugosum (Castellani) Dodge (1935) Geotrichum hirtum Windisch (1952) nom. nud. Geotrichum rotundatum (Castellani) Ciferri & Redaelli var. gallicum Castellani (1940) nom. nud. Hemispora pararugosa Castellani, Douglas & Thompson (1921) Trichosporon pararugosum (Castellani, Douglas & Thompson) Nannizzi (1934) Mycoderma pararugosa (Castellani, Douglas & Thompson) Dodge (1935) Mycotorula mucinosa Goidanich, Ciferri & Redaelli (1939) Neogeotrichum pulmoneum de Magalhaes (1932) Oidium brasiliense de Magalhaes (1918) [nee Zymonema brasiliense Splendore (1912) = Coccidioides brasiliensis (Splendore) de Almeida (1929) = Paracoccidioides brasiliensis (Splendore) de Almeida (1930) = Monilia brasiliensis (Splendore) Vuillemin (1931)] Geotrichum brasiliense (de Magalhaes) Ciferri & Redaelli (1929) Mycoderma brasiliense (de Magalhaes) Neveu-Lemaire (1921) Monilia brasiliensis (de Magalhaes) Brumpt (1922) Myceloblastanon brasiliense (de Magalhaes) Ota (1928)

Candida brasiliensis (de Magalhaes) Basgal (1931) Trichosporon brasiliense (de Magalhaes) Puntoni (1935) Oidium pulmoneum de Magalhaes (1914) [nee Oidium pulmoneum Bennett (1842); Oospora pulmonea (Bennett) Saccardo (1886) = Mycoderma pulmoneum (Bennett) Vuillemin (Brumpt 1927) = Monilia pulmonea (Bennett) Castellani & Chalmers (1913) = Geotrichum pulmoneum (Bennett) Basgal (1931)] Oospora cerebriformis Kambayashi (1923) Trichosporon cerebriforme (Kambayashi) Ota (1928) Oospora granulosa Kambayashi (1923) Trichosporon granulosum (Kambayashi) Ota (1928) Parendomyces balzeri Gougerot & Burnier (Balzer et al. 1912) Saccharomyces balzeri (Gougerot & Burnier) Castellani & Chalmers (1913) Monilia balzeri (Gougerot & Burnier) Neveu-Lemaire (1921) Trichosporon balzeri (Gougerot & Burnier) Ota (1926) Trichosporium balzeri (Gougerot & Burnier) Bolognesi & Chiurco (1927) Geotrichoides balzeri (Gougerot & Burnier) Langeron & Talice (1932) Candida balzeri (Gougerot & Burnier) de Almeida (1933) Proteomyces balzeri (Gougerot & Burnier) Dodge (1935) Proteomyces variabilis Boedijn & Verbunt (1938) Trichosporon aneurinolyticum Yonezawa, Aoki, Ota, Nishi & Matsumoto (1957) nom. nud. Trichosporon cutaneum (de Beurmann, Gougerot & Vaucher) Ota var. curvatum Ohara & Nonomura (1954e) nom. nud. Trichosporon equinum Fambach (1926) Trichosporon hortai Nino (1933) [nee Trichosporon hortai Brumpt (1913)] Trichosporon humahuaquensis Mazza & Nino (1933) Trichosporon pardi Fernandez-Baquero & Trespalacios (1959) nom. nud. Trichosporon ribeiroi Gomes de Moraes (1941) nom. nud. Trichosporon undulatum Windisch (1952) nom. nud.

Species received too late for inclusion in this treatment: Trichosporon rugosum (Castellani) Ota (1926); Trichosporon pararugosum (Castellani, Douglas & Thompson) Nannizzi (1934); Trichosporon rotundatum (Castellani) Puntoni (1935). The preceding three taxa (see above for synonyms) were obtained by the courtesy of W.L Golubev (Russian Collection of Microorganisms, Pushchino, Russia). They have the same rRNA sequence giving the priority to the specific epithet rugosum. Phylogenetically, the species T. rugosum is related to T. ovoides and T. asahil Recent species not available for inclusion in this treatment: Trichosporon domesticum Sugita, Nishikawa & Shinoda (1995)

873

111. Trichosporonoides Haskins & Spencer / G.S. de Hoog and M.Th. Smith

111. Trichosporonoides Haskins & Spencer G.S. de Hoog and M.Th. Smith Diagnosis of the genus Colonies are smooth or cerebriform, cream-colored turning to olivaceous brown. Budding is multilateral. When budding cells are formed on true hyphae or are loose, they frequently cohere in pseudomycelial chains. Chlamydospores are absent. Cell walls are multilamellar. Septal dolipore is present. Glucose is fermented. Nitrate is assimilated. Coenzyme Q-9. Xylose and fucose are absent from cell walls. Diazonium blue B is positive. Urease is positive. Type species Trichosporonoides oedocephalis Haskins & Spencer Species accepted 1. 2. 3. 4. 5.

Trichosporonoides Trichosporonoides Trichosporonoides Trichosporonoides Trichosporonoides

madida de Hoog (1979) megachiliensis Inglis & Sigler (1992) nigrescens Hocking & Pitt (1981) oedocephalis Haskins & Spencer (1967) spathulata de Hoog (1979)

Key to species See Table 96. 1. 2(1). 3(2). 4(3).

a b a b a b a b

Raffinose assimilated Raffinose not assimilated -^ 2 Sucrose assimilated -^ 3 Sucrose not assimilated D-Xylose assimilated D-Xylose not assimilated -^ 4 Galactose fermented Galactose not fermented

T. spathulata:

p. 876

T. nigrescens: T. madida:

p. 875 p. 873

T. oedocephalis: T. megachiliensis:

p. 875 p. 874

Table 96 Key characters of species in the genus Trichosporonoides Species

Fermentation Galactose

Trichosporonoides T

Sucrose

Assimilation Sucrose

Raffinose

Melezitose

D-Xylose

Growth Salicin

Lactose

Vit-free^

37°C

madida

megachiliensis

T. nigrescens T

oedocephalis

T. spathulata ^ In vitamin-free medium.

Systematic discussion of the species 111.1. Trichosporonoides madida de Hoog (1979a) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 4 6 mm in diameter, cerebriform, initially mucoid, soft, with a sharp, irregular margin, cream-colored, and finally grayish-brown. Budding cells are subhyaline, ellipsoidal.

(2.8-4.5) X (4.5-8.0) fxm, with multilateral budding, and may cohere in short pseudomycelial chains; hyphae are mostly absent (Fig. 458).

Fermentation: Glucose Galactose Sucrose

+

-

+

Maltose Lactose Raffinose

874

Vic. Descriptions of anamorphic basidiomycetous genera and species

exactly known, T. madida may be regarded as a lipophilic species, as are Moniliella suaveolens and Trichospownoides spathulata. It differs by a considerably lower mol% G + C content of DNA (de Hoog and Gueho 1984). It can be differentiated from M. suaveolens by growth at 37''C and from T spathulata by a large number of growth characteristics. 111.2. Trichospownoides megachiliensis Inglis & Sigler (Inglis et al. 1992) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 14-16 mm in diameter,finelycerebriform, initially mucoid, soft, with a sharp, irregular margin, and a yellowish-brown center. Budding cells are subhyaline, ovoidal or subspherical, (47.5)x(4-7)|im, with multilateral budding; cells cohere in short pseudomycelial chains which separate into arthroconidia (Fig. 459). Hyphae are mostly scant. Fermentation:

oQo§

Glucose Galactose Sucrose

Maltose Lactose Raffinose

Assimilation: Glucose Fig. 458. T. madida, CBS 240.79. Yeast phase and pseudomycelium with Galactose L-Sorbose blasto- and arthroconidia. ChA, 22*'C, 5 days. Sucrose Maltose Assimilation: Cellobiose Glucose + A'^-Acetyl-D-glucosamine Trehalose Galactose Methanol Lactose L-Sorbose Ethanol Melibiose Sucrose + Glycerol Raffinose Maltose + Erythritol Melezitose Cellobiose + Ribitol Inulin Trehalose Galactitol Soluble starch Lactose D-Mannitol D-Xylose Melibiose D-Glucitol L-Arabinose Raflfinose a-Methyl-D-glucoside D-Arabinose Melezitose Salicin D-Ribose Inulin D-Gluconate L-Rhamnose Soluble starch DL-Lactate D-Glucosamine D-Xylose + Succinate + Citrate L-Arabinose Inositol D-Arabinose Additional assimilation D-Ribose + Hexadecane characteristics: Nitrate L-Rhamnose Cadaverine + D-Glucosamine n Vitamin-free Ethylamine v Additional assimilation tests and other growth L-Lysine + characteristics: Co-Q: 9, CBS 191.92. Mol% G + C: Not determined. Urease + Growth at 37°C + Co-Q: 9, CBS 240.79. Mol% G + C: 50.2, CBS 240.79 {T^: de Hoog and Gueho 1984).

Origin of the strain studied: CBS 240.79, isolated at a margarine factory. Type strain: CBS 240.79. Comments: Although the source of isolation is not

A/^-Acetyl-D-glucosamine n Methanol n Ethanol n Glycerol + Erythritol + Ribitol Galactitol D-Mannitol + D-Glucitol V a-Methyl-D-glucoside Salicin D-Gluconate n DL-Lactate Succinate v Citrate + Inositol Hexadecane n Nitrate v Vitamin-free n

tests and other growth 60% Glucose Growth at 3 7°C

+ +

Origin of the strains studied: CBS 190.92 (ATCC 76718), from Ascosphaera-infQctQd larva of the alfalfa leafcutting bee (Megachile rotundata), Canada, Goettel, and two further strains from the same source. Type strain: CBS 190.92, ex type.

111. Trichosporonoides Haskins & Spencer / G.S. de Hoog and M.Th. Smith

875

Fig. 460. T. nigrescens, CBS 269.81. Pseudomycelium of yeastlike phase. MEYA, 22°C, 10 days.

10 ^m

Additional assimilation tests and other growth characteristics:

Fig. 459. T. megachiliensis, CBS 190.92. Mycelium with blastoconidia. PCA, 22T, 5 days. Growth at 37T Co-Q: 9, CBS 269.81. Mol% G + C: 57, 2 strains (BD: Hocking and Pitt 1981).

111.3. Trichosporonoides nigrescens Hocking & Pitt Origin of the strains studied: CBS 269.81, from (1981) spoiled melon jam, Pitt, Australia; from marmalade (1). Type strain: CBS 269.81. Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22''C, colonies are 3 mm in diameter, dry, hemispherical, mustard yellow, and later cere- Comments: The black and mustard yellow pigments briform and blackish-brown. Hyphae, when present, are rapidly disappear from cultures maintained on malt subhyaline and disarticulate into arthroconidia; terminally agar. Cultures are then strongly reminiscent of several they change into pseudomycelium and produce chains of Moniliella species. T. nigrescens may be a yeastlike form blastoconidia. Conidia are subhyaline, but become dark of the osmophilic species Moniliella mellis (Fabian & Quinet) V Rao & de Hoog, which also is unable to grow olivaceous, (4.0-6.5)x(5.0-8.0) ^im (Fig. 460). with sucrose. T. nigrescens differs by growth with D-ribose and without vitamins. Fermentation: Glucose Galactose Sucrose

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

Maltose Lactose Raffinose

AA-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

111.4. Trichosporonoides oedocephalis Haskins & Spencer (1967) n n + + + + + n n + +

Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 4 mm in diameter, slimy, slightly wrinkled, initially white, but soon becoming olivaceous-brown with an ochraceous reverse. Odor is strongly yeastlike. Hyphae are submerged, hyaline, (2.0-3.5) |im wide, and disarticulate into rectangular arthroconidia. Blastoconidia, which are formed in chains on hyphae, are ellipsoidal, (2.0-3.5) x(48) |im, and reproduce ftirther by budding. Inflated hyphal heads that bear spherical, thick-walled, golden brown, synchronously produced conidia may also be present (Fig. 461). Fermentation: Glucose Galactose Sucrose

Maltose Lactose Raflfinose

876

Vic. Descriptions of anamorphic basidiomycetous genera and species

Fig. 461. Z oedocephalis, CBS 649.66. Pseudomycelium with blastoand arthroconidia; swollen capitate cells with synchronous conidia. MEYA, 22"C, 30 days.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ +

-

+ + +

-

V

-

+

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n + +

-

+ +

-

n

-

V V

-

n +

Additional assimilation tests and other growth characteristics: n

Growth at 37°C Urease + Co-Q: 9, CBS 649.66. Mol% G + C: 45.8, CBS 649.66 {T, de Hoog and Gueho 1984).

Fig. 462. T. spathulata, CBS 241.79. Yeastlike phase with blasto- and arthroconidia. PCA, 22''C, 5 days.

hyphae. Pseudomycelium is present. Hyphae are (2-3) fim wide, hyaline, and bear lateral and terminal chains of blastoconidia; hyphae soon disintegrate into rectangular arthroconidia (Fig. 462).

Origin of the strain studied: CBS 649.66 (ATCC Fermentation: 16958), from the brood of a honey bee, Haskins, Glucose California. Galactose Sucrose Type strain: CBS 649.66. Comments: The species is close to Moniliella mellis Assimilation: (Fabian & Quinet) V Rao & de Hoog and M pollinis Glucose (Hennebert & Verachtert) de Hoog & Gueho, all of Galactose which are associated with honey bees. However, the L-Sorbose mol% G + C contents of DNA of all three species are Sucrose Maltose markedly different (de Hoog and Gueho 1984). M mellis Cellobiose is recognized by its absence of growth with sucrose, while Trehalose M. pollinis is unable to grow with galactose. The equally Lactose osmophilic species Trichosporonoides nigrescens differs Melibiose Raffinose by inability to ferment sucrose. 111.5. Trichosporonoides spathulata de Hoog (1979a) Growth on 4% malt extract/0.5% yeast extract agar: After 10 days at 20-22°C, colonies are 4 mm in diameter, smooth to wrinkled, cream-colored to olivaceous, and with a vague marginal zone of submerged

Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + +

Maltose Lactose Raffinose

+

+

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n + +

V

-

+ + +

V

-

+ +

V

-

+

-

n

V

-

-

+ +

-

+ n + + +

-

n + +

111. Trichosporonoides Haskins & Spencer / G.S. de Hoog and M.Th. Smith

Additional assimilation tests and other characteristics:

growth

Urease + Growth at ST'^C + Co-Q: Not determined. Mol% G + C: 61.5-62.5, CBS 241.79, CBS 242.79 (T^: de Hoog and Gueho 1984).

Origin of the strains studied: CBS 241.79 and two additional cultures, all from ghee (buffalo milk), India. Type strain: CBS 241.79.

Comments: The species is thus far only known from a few strains isolated from Indian buffalo milk. Its mol% G + C content is in the range of that of Moniliella suaveolens rather than of the remaining Trichosporonoides species; it differs consistently from M suaveolens by its ability to grow at 37°C.

sn

Comments on the genus The genus is very similar to Moniliella Stolk & Dakin. Both genera are supposed to be of heterobasidiomycetous affinity (de Hoog 1979b), as concluded from ability to hydrolyze urea, a positive diazonium blue B staining reaction, the presence of multilamellar cell walls, dolipore septal ultrastructure (Martinez 1979), and 5S rRNA sequences (Walker 1984). Both genera are peculiar by their xerophily (Hocking and Pitt 1981) and fermentative abilities (Martinez et al. 1979), and lack xylose as well as fucose from their cell walls (Weijman 1979a). The cellular dimensions in Moniliella are generally larger than in Trichosporonoides (de Hoog 1979a, Inglis et al. 1992). Ramirez (1989) described a Trichosporonoides species, T australiensis Ramirez, from orange-mango drink in Australia. No culture is available for study. Inglis et al. (1992) considered T australiensis to be synonymous with Brettanomyces anomalus.

878

Vic. Descriptions of anamorphic basidiomycetous genera and species

112. Tsuchiyaea Y. Yamada, Kawasaki, M. Itoh, Banno & Nakase Y. Yamada and I. Banno Diagnosis of the genus Cells are globose, ovoid to cylindrical, and reproduce by the formation of enteroblastic buds or of conidia on stalks. A single conidium is formed at the top of the stalks and liberated at a septum in the mid-region of the stalks without projection. Ballistoconidia are absent. Glucose is not fermented. D-Glucuronate and mjo-inositol are assimilated. Diazonium blue B color reaction is positive. Xylose is present in the cells. Nitrate is not assimilated. Urease is produced. Coenzyme Q-9 is present. Type species Tsuchiyaea wingfieldii (van der Walt, Y. Yamada & Ferreira) Y. Yamada, Kawasaki, M. Itoh, Banno & Nakase Species accepted 1. Tsuchiyaea wingfieldii (van der Walt, Y Yamada & Ferreira) Y Yamada, Kawasaki, M. Itoh, Banno & Nakase (1988) Systematic discussion of the species 112.1. Tsuchiyaea wingfieldii (van der Walt, Y. Yamada & Ferreira) Y. Yamada, Kawasaki, M. Itoh, Banno & Nakase (1988b) Synonym: Sterigmatomyces wingfieldii van der Walt, Y. Yamada & Ferreira (1987d)

Growth in malt extract: After 3 days at 25°C, the cells are globose to ellipsoidal, (4.0-10.0)x(3.0-9.0) |im, reproduce by enteroblastic budding, and occur singly, in pairs or short chains. Giant cells, 8.0x 14.0 |im, may be present. A sediment, ring and islets are formed. After 4 weeks at ambient temperature, a sediment and a thick, wrinkled creeping pellicle are present. Growth on malt agar: After 3 days at 25°C, the cells are globose, ellipsoidal, ovoid, occasionally apiculate, (3.0-11.0)x(3.0-10.0)[im, occur singly, in pairs or short chains, and reproduce either by enteroblastic budding or by the formation of stalks which delimit conidia terminally. The conidia are detached by disjunction at a septum in the mid-region of the stalks. The mature, detached conidia, (9.5-14.0)x(5.5-6.5) |im, are clavate to spathulate, with truncate bases. Stalk-forming cells are, as a rule, lipid-rich, and form 1-3 stalks, which measure (2.0-10.0)x(1.5-2.0)^im. The streak culture is butyrous, creamy-white, and faintly crispulate with an entire margin. After 4 weeks at ambient temperature, the culture is crispulate, cream-colored and dull with a lobate margin. Dalmau plate culture on corn meal agar: Neither pseudomycelium nor mycelium is formed. Fermentation: absent.

Assimilation: Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + + +

-

+w + V

+ +

-

+ s s + + w/-

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

s

-

+ + + +

-

+ +

-

+ s

-

V

-

+

Additional assimilation tests and other g roi characteristics: 2-Keto-D-gluconate s Urease 5 -Keto-D-gluconate D-Glucono-1,5-lactone Arbutin + Thiamine-free w L-Lysine as N-source Biotin-free 0.01% Cycloheximide Ethylamine 50% Glucose + Growth at 25°C Growth at 30T 60% Glucose Starch formation w Co-Q: 9. Mol%G + C: 55.37, type; strain (CBS 7118); 53.3 (HPLC). Xylose in cells: Present.

+

-

+

-

Origin of the strain studied: IFO 10204 (CBS 7118), frass of a Scolytid beetle in Olea europae subsp. africana, J.P. van der Walt, South Africa. Type strain: CBS 7118 (IFO 10204). Comments: T wingfieldii is morphologically unique in reproducing either by enteroblastic budding or by the formation of conidia on the apex of stalks, and in containing xylose in the cells. The presence or absence of xylose in

112. Tsuchiyaea Y. Yamada, Kawasaki, M. Itoh, Banno & Nakase / Y Yamada and I. Banno

cells has been utilized as an important criterion for classifying basidiomycetous yeasts at the generic level. By these characteristics Tsuchiyaea is distinguished from Sterigmatomyces. T wingfieldii conidia are separated at the midpoint of the short stalks and the species have coenzyme Q-9. In contrast, Fellomyces and Kurtzmanomyces have

879

conidia that are disjointed at the distal end of the stalks and have coenzyme Q-10. The latter two genera therefore are clearly discriminated from Tsuchiyaea. The characteristic of the type culture is that its propagation by stalked conidia appears to be limited to growth on solid media, a characteristic that is not observed in malt extract.

Part VII

Prototheca, a yeastlike alga

This Page Intentionally Left Blank

113. Prototheca Kruger / R.S. Pore

883

113. Prototheca Kruger R.S. Pore Diagnosis of the genus Colonies are yeastlike, but budding is absent. Reproduction is by the formation of a variable number of sporangiospores (2-16 or more) within a sporangium. The sporangiospores are released through a split in the sporangial wall and usually disperse (Fig. 463). The reproductive morphology is similar to that of Chlorella and is the basis for a presumptive phylogenetic relationship to the algae, however, Prototheca lacks plastids or vestigial plastids (referred to in the literature, but not confirmed by this author). The sporangium is nearly spherical, or an enlarged version of the sporangiospore. The sporangiospores are usually spherical or ellipsoidal, but reniform and falcate strains occur. A dauer cell stage resists staining in Rose Bengal stain^ No sexual stage occurs (Pore 1985).

/B

\^

y/ ^

Fig. 463. Schematic life cycle of Prototheca. A sporangiospore (A) enlarges to form a dauer cell (B), undergoes further development to a sporangium (C), which releases more sporangiospores (D).

Ammonium chloride is assimilated as a sole nitrogen source, but nitrate is not (Pore 1972). Glucose is assimilated and the assimilation of a few other carbon substrates has taxonomic significance (Pore 1985). Lactic acid is produced from glucose by P. zopfii and some species produce acid, but not gas from glucose. Glycogen is the storage carbohydrate; starch is absent. Neither chlorophylls nor carotenoids are produced. Thiamine and oxygen are required for growth. The cell wall resists acid and alkaline hydrolysis (Conte and Pore 1973). Type species Prototheca zopfii Kruger Species accepted 1. Prototheca moriformis Kruger (1894) 2. Prototheca stagnora (Cooke) Pore (1985) 3. Prototheca ulmea Pore (1986) 4. Prototheca wickerhamii Tubaki & Soneda (1959) 5. Prototheca zopfii Kruger (1894) a. Prototheca zopfii Kruger var. zopfii (1985) b. Prototheca zopfii var. hydrocarbonea Pore (1985) c. Prototheca zopfii var. portoricensis Pore (1985) Key to species See Table 97. 1. 2(1). 3(1). 4(3).

a b a b a b a b

Sporangiospores greater than 5.7 |im in long dimension; dauer cells greater than 8.5 [im -^ 2 Sporangiospores less than 4.3 |im in long dimension; dauer cells less than 8.5 (im —> 3 Capsule absent upon primary isolation Capsule present upon primary isolation Trehalose assimilated Trehalose not assimilated -^ 4 Fructose assimilated Fructose not assimilated

P. zopfii: p. 886 P. mortformis: p. 884 P. wickerhamii: p. 886 P. stagnora: p. 885 P. ulmea: p. 885

^ Rose Bengal Stain for Prototheca species (Pore 1985): lOOmg Rose Bengal + 100 ml distilled water. Stain 1-10 min.; all cells stain red except the dauer cells.

VII. Prototheca, a yeastlike alga

Key characters of species in the genus Prototheca Species

Assimilation Fructose

Prototheca moriformis P. stagnora P. ulmea P. wickerhamii

P. zopfii

Galactose

+ +

-

+ +

Morphology

1-Propanol

+

+/w +/w

-

-

-

+

+

Trehalose

Dauer cell

Dauer cell >8.5 fxm^

+

+ + +

+

V

-

Spherical'^

Capsule'^

+

V

-

+

+ + +

V

+

-

^ Dauer cell less than 8.5 [im in diameter, sporangiospores less than 4.3 jim. ^ Dauer cell greater than 8.5 [xm in diameter, sporangiospores greater than 5.7 [im. ^ All cell stages obviously nearly spherical. ^ Cell surrounded by clear zone when negatively stained upon primary isolation. All tests were done in Prototheca isolation medium at 25''C with 1% wt./vol. carbon sources (Pore 1985).

Systematic discussion of the species

Assimilation (48 hours):

113.1. Prototheca moriformis Kriiger (1894a)

Synonym: Prototheca moriformis Kriiger var. betulinus Chodat (1913)

Growth on Prototheca isolation medium (PIM): The Prototheca isolation medium is described in Table 98. After 5-10 days, cells are encapsulated, resulting in a slimy, glistening, mucoid to viscoelastic, translucent to white colony. Newly released sporangiospores are spherical, or more frequently ellipsoidal, (3-5x4-6, ave. 4x5 jim). Dauer spores are usually ellipsoidal (7-9x9-11, ave. SxlOjim). The sporangium is spheroidal or ellipsoidal, (8-15x10-20, ave. 12xl4|im). Sporangiospores rapidly developed a 1-5 jim (ave. 3 |im) thick capsule that is retained as the cell develops. Growth on glucose-peptone based media, eg., Sabouraud's medium: The colony type remains the same, but a tan pigment accumulates with age. Cell morphology and size varies slightly depending on the substrate. Temperature optima vary between 22-30°C, but some strains grow at ?)TC. P. moriformis grows over a wide pH range. Fermentation: absent. Table 98 Prototheca Isolation Medium (PIM) Distilled water Potassium hydrogen phthalate Sodium hydroxide Magnesium sulfate Potassium phosphate, monobasic Ammonium chloride Thiamine Purified agar Carbon source^ pH Autoclave

IL lOg 0.9 g 0.1 g 0.2 g 0.3 g 0.001 g 15g lOg 5.1±0.1 15 min.

^ For assimilation test media, substitute carbon source 1% wt./vol. For isolation medium, add glucose and 5-fluorocytosine (0.25 g/L) (Pore 1973).

Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ n w n v n n n n

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n v n n n n n n n n n n -

Additional assimilation tests and other growth characteristics: l-Propanol D(-)Fructose D(+)Mannose

+/w + -

Acetate (pH 5.1) Clotrimazole

+/w

Origin of the strains studied: Thirty-five strains were examined for morphological and major nutritional traits. Strains excluded from the species P moriformis were NRRL Y-6865, Y-6867, Y-6869, and Y-6871; CDC B-1444 and B-1692; ATCC 16522, 16523 and 16524; UTEX 1434. P. moriformis has been isolated from plant, animal, soil, aqueous and sewage habitats (Pore 1985). Type strain: ATCC 50081, cheese factory waste water, via R.S. Pore (1985); neotype (Pore 1985). Comments: Kriiger's (1894a,b) original description of slimy Prototheca sp. was confirmed by Pringsheim (1963) and Pore (1985). It was acknowledged by Pore (1985) that the main difference between P. moriformis and P zopfii is the presence of the distinctive capsule that also causes the slimy or mucoid colony characteristic of P moriformis. It was also acknowledged that a few strains of/? moriformis lost their capsule forming capacity in long-term culture, making them indistinguishable from P zopfii by current

885

113. Prototheca Kriiger / R.S. Pore

methods. This is a reversible phenomenon, the cause of which is unknown. The major justification for maintaining P. moriformis as a separate species is that typical isolates, which are stable for the capsule trait, are readily obtained from nature. The capsular polymer is a polyglycan composed primarily of galactose and rhamnose. R moriformis was shown to have a DNA base composition similar to P. zopfii, but the DNA homology was only about 25% (Huss et al. 1988). 113.2. Prototheca stagnora (Cooke) Pore (1985)

Synonym: Prototheca viscosa Pringsheim 1963 nom. nud.

Growth on PIM: After 5-10 days, cells are encapsulated, resulting in a slimy, glistening, translucent to whitish colony. Newly released sporangiospores are spherical, (2.5-4.5, ave. 3.5 [im). Dauer cells are spherical, (5.58, ave. 6.5 [im), as are sporangia (7-14, ave. 9.5 |im). Rarely, sporangiospores are spheroidal or ellipsoidal. All stages are encapsulated, capsules are 1-5 (ave. 3 |im) in thickness. In a few strains, the capsule characteristic was lost upon serial subculture. In addition to PIM, P. stagnora grows on other media, including Sabouraud's medium. No significant differences (an exception was the development of a variable tan colony pigment in old cultures) in the colony type or cell morphology on other media were noted. Neither temperature optima nor pH is critical for growth, but 25±5°C and pH 5-8 are usually suitable. Fermentation: absent. Assimilation (72 hours): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ + n

-

w n

V

-

n

-

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n

Acetate (pH 5.1) Clotrimazole

w/-

V

n n n

-

n n n n n + n

n Additional assimilation tests and other growth characteristics: l-Propanol D(-)Fructose

n n

+/w +

V

O r i g i n o f t h e strains s t u d i e d : Twenty-five strains were examined for morphological and major nutritional traits; of these 19 were directly isolated from nature. Strains from culture collections included N R R L Y-6872, ATCC 16528

and CDC B-1277. A strain excludedfi*omthe species was UTEX 1442 (ATCC 16527). Type strain: ATCC 16528, from sludge, via W.B. Cooke. Comments: P stagnora was emended by Pore (1985) to include only the smaller of the two sizes originally described by Cooke (1968). Also, the capsule characteristic was added to the emended description, but the originally reported assimilation of sucrose was not substantiated in the emended description. Subsequently, strains of P. stagnora which were unable to assimilate fructose were transferred to P ulmea (Pore 1986). P stagnora, in order of frequency, was isolated from sewage and plant material. 113.3. Prototheca ulmea Pore (1986) Growth on PIM: After 5-10 days, cells are encapsulated resulting in a nonpigmented mucoid colony. Sporangiospores are ellipsoidal to subglobose, (2.8-3.0x3.03.5 |im, ave. 2.9x3.3 |im). Sporangia are spheroidal, (7.210 ^im, ave. 8.6 jim). Dauer cells are ellipsoidal, (4.55.8X5.5-8.0 |im, ave. 5.3 x 6.7 fxm). Capsule thickness is 2-5 jim, ave. (3.5 |im). P ulmea grows on additional laboratory media such as Sabouraud's medium and the colony and morphology is similar to that produced on PIM. Temperature optima (approx. 25°C) and pH are not critical for growth, but P ulmea is the slowest growing and least robust Prototheca species. Fermentation: absent. Assimilation (72 hours): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+

-

n

-

n

-

n

-

n n

-

n

A'^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Sahcin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n n n n n n

-

n n n n n n n

-

Additional assimilation tests and other g;ro^ characteristics: l-Propanol Acetate (pH 5.1) V D(-)Fructose Clotrimazole D(+)Mannose Origin of the strains studied: Eighteen strains isolated from nature were examined for morphological and major nutritional traits. Type strain: ATCC 50112, from slime flux of elm, via R.S. Pore.

VII. Prototheca, a yeastlike alga

886

Comments: Some strains of P. ulmea were originally included with P. stagnora Pore (1985), but based upon several distinctive features, a separate species was later described (Pore 1986). P. ulmea was ellipsoidal and did not assimilate fructose nor any known carbohydrate other than glucose. Many strains were isolated from the slime flux of various elm species, including the American elm (Ulmus americand).

P. wickerhamii both require thiamine and use ammonium (but not nitrate) nitrogen for growth, while most species of Chlorella are otherwise (Pore 1972). In addition, both species assimilate trehalose (Kessler 1982), exhibit acetate (pH 5.1) inhibition, and grow well on PIM, a selective medium. Like Prototheca spp., but unlike many other Chlorella spp., C protothecoides stores glycogen and has a similar cell wall (Conte and Pore 1973). The DNA base composition of P wickerhamii was 113.4. Prototheca wickerhamii Tubaki & Soneda closer to that of C protothecoides than were those of (1959) othQY Prototheca spp. tested, but DNA binding homologies Growth on PIM: A white or off-white yeastlike showed great heterogeneity between the two, as well as becolony forms after 5 days. All cell stages are spherical. tween the Prototheca spp. themselves (Huss et al. 1988). Sporangiospores are 2.5^.5 |im (ave. 3.2 [im), sporangia Confirmation of the relationship between P wickerhamii are 7-13 \km (ave. 9.4 fim), and dauer cells are 5.5-8.5 |im and C protothecoides comes from 16S-like rRNA gene (ave. 6.5 |im) in diameter. DNA sequence similarities that place these two species Temperature optima are usually above 25°C and some apart from other Chlorella spp. tested (Huss and Sogin strains grow at 37°C. The pH range is wide. A wide 1990). Further sequence and structural analysis of the range of media support growth. On Sabouraud's medium, conserved SSU rRNA mitochondrial gene inferred a close for example, the colony characteristically develops a tan phylogenetic relationship between P wickerhamii and pigmentation with age. plants (Wolff and Kiick 1990). Fermentation: absent. P. wickerhamii was found in high numbers in all Assimilation (48 hours): domestic and municipal sewage where it is numerically Glucose + A/^-Acetyl-D-glucosamine the most common Prototheca sp. (Pore et al. 1986). It has Galactose Methanol + been isolated from many aquatic sources, food, plants, and + L-Sorbose Ethanol animals. It may be infrequently isolated from human feces, + Sucrose Glycerol but a causative effect has not been determined. It was Maltose Erythritol Cellobiose Ribitol n weakly pathogenic for mice and was the principal cause n Trehalose + Galactitol of protothecosis in man (Pore et al. 1983, Pore 1997). Lactose V D-Mannitol n Melibiose D-Glucitol — Raffinose a-Methyl-D-glucoside 113.5. Prototheca zopfii Kriiger (1894a) Melezitose Salicin This species has three varieties: Inulin D-Gluconate Soluble starch DL-Lactate + D-Xylose Succinate n Prototheca zopfii Kriiger var. zopfii (1985) L-Arabinose Citrate n Synonyms: D-Arabinose Inositol Prototheca zopfii Kriiger (1894a) D-Ribose Hexadecane Prototheca chlorelloides Beijerinck (1904) L-Rhamnose Nitrate Prototheca ciferrii Negroni & Blaisten (1941) n D-Glucosamine Vitamin-free Prototheca salmonis Gentles & Bond (1977) Prototheca seqbwema Davis, Spencer & Wakelin (1964) Additional assimilation tests and other gjro^ Prototheca trispora Ciferri, Montemartini & Ciferri (1957) characteristics: Prototheca uhrizsyi Zsolt & Novak (1968) l-Propanol Acetate (pH 5.1) D(-)Fructose D(+)Mannose

+

Clotrimazole

w

V

Origin of the strains studied: Eighty-five strains were examined for morphological and major nutritional traits. Representatives from culture collections included UTEX 1440; NRRL Y-2348, Y-6865, Y-6867, Y-6869, Y-6871, Y-7029 and Y-7045; CDC 45-1029-70, 43-106870, B-1280, B-1281, B-1282, B-1418, B-1444, B-1694, and B-2224; ATCC 16522, 16523, 16529 and 16531. Type strain: ATCC 16529, from household plumbing, via W.B. Cooke. Comments: P wickerhamii is the only species for which there is a corresponding species of Chlorella with shared properties. Chlorella protothecoides Kriiger (1894a,b) and

Prototheca zopfii var. hydrocarbonea (KockovaKratochvilova & Havelkova) Pore (1985) Synonym: Prototheca hydrocarbonea Kockova-Kratochvilova & Havelkova (1974)

Prototheca zopfii var. portoricensis (Ashford, Ciferri & Dalmau) Pore (1985) Synonym: Prototheca portoricensis Ashford, Ciferri & Dalmau (1930)

Growtli on PIM: After 5 days, colonies are white or offwhite, creamy to distinctly roughened or wrinkled. Cells are commonly spheroidal to ellipsoidal, but a few strains

113. Prototheca Kruger / R.S. Pore

887

are reniform. Cells are waxy and hydrophobic. Newly released sporangiospores are spheroidal, (4.5-7.5 |im, ave. 6.5 |im), or ellipsoidal (3-7 x 5-8 jjim, ave. 5.5x6.5 |im). Dauer cells are spheroidal, (8.5-14 fxm, ave. ll|im), or ellipsoidal (6-11x8.5-13 |im, ave. 9.5x11.5 |im), and sporangia are spheroidal, (14-25 [im, ave. 17.3 |im), or ellipsoidal (11-20x14-23 |im, ave. 14.5x16.5 |im) Fig. 464). Cell morphology and colony type vary depending on substrate and environmental conditions. Temperature and pH variation are tolerated. Some strains grow at 37°C. P. zopfii grows more vigorously than other species in culture. Fermentation: absent. Assimilation (48 liours): Glucose Galactose L-Sorbose Sucrose Maltose Cellobiose Trehalose Lactose Melibiose Raffinose Melezitose Inulin Soluble starch D-Xylose L-Arabinose D-Arabinose D-Ribose L-Rhamnose D-Glucosamine

+ -* w v v -* n

A/^-Acetyl-D-glucosamine Methanol Ethanol Glycerol Erythritol Ribitol Kibitol Galactitol D-Mannitol D-Glucitol a-Methyl-D-glucoside Salicin D-Gluconate DL-Lactate Succinate Citrate Inositol Hexadecane Nitrate Vitamin-free

n n

Additional assimilation tests and other growth characteristics: Acetate (pH 5.1) l-Propanol + Clotrimazole D(-)Fructose + D(+)Mannose * Assimilation (w/+) on suitable basal medium in published reports, but not confirmed.

Origin of the strains belonging to the variety zopfii: ATCC 16524, 16532, 16533; UTEX 289, 328, 1434; NRRL Y-6868, Y-7056, Y-7059, YB-2462, YB4121; CDC B-1268, B-1271, B-1272, B-1285, B-1692, all of unknown origin. UTEX 1442 (sewage), NRRL YB990 and YB-4825 (plants), ATCC 16527 (sewage); CDC B1270 (animal). Type strain: ATCC 16533. Origin of the strains belonging to the variety hydrocarboneai ATCC 30253 (marine sediment), NRRL Y-7676 (origin unknown). Type strain: ATCC 30253. Origin of the strains belonging to the variety portoricensis: NRRL YB-4826 (human intestine), UTEX 178 (unknown). Type strain: NRRL YB-4826. Comments: Negroni and Blaisten (1941), and later Cooke (1968) designated P. zopfii as the lectotype for

Fig. 464. P. zopfii. Phase contrast microscopy: (A) s, sporangiospore; d, dauer cell; m, mature sporangium. (B)-(C) Sporangium and sporangiospores by scanning electron microscopy.

Prototheca. Kruger (1894a,b) described P. zopfii as spheroidal, but Pore (1985) concluded that 75% of the strains were ellipsoidal, 25% were spheroidal, and a few strains were reniform. Reniform strains have been referred to as P. zopfii var. portoricensis Pore (1985), but there are no nutritional traits to otherwise distinguish this taxon. Hexadecane-assimilating strains (Walker and Pore 1978) have been referred to as P. zopfii var. hydrocarbonea Pore (1985), but there are no other nutritional or morphological traits to otherwise distinguish this taxon. Blaschke-Hellmessen et al. (1985) reported that three unnamed varieties of P. zopfii differed from one another morphologically and nutritionally. Two varieties were reported to assimilate galactose but, this could not be confirmed when PIM was used as the basal medium (Pore 1985). Hence, assimilation of galactose varied depending on the basal medium used. Additional synonyms used in the literature, but for which no authorities were found are P. crieana, P krugeri, P pastoriensis, P portoricensis var. ciferrii, P. portoricensis var. trispora, and P tropicalis. In long term culture some strains spontaneously, but reversibly, develop an extracellular polysaccharide capsule, making them morphologically and physiologically indistinguishable from P morifijrmis (Pore 1985). P. zopfii is common in sewage and has been isolated from many plant and animal sources. It caused mastitis in dairy cattle (Pore et al. 1987, Pore 1997).

This Page Intentionally Left Blank

Part VIII

Key to species

This Page Intentionally Left Blank

Chapter 114

Key to species R.W. Payne, C.R Kurtzman and J.W. Fell 1. Introduction Species given in this key are those that readily grow in the standard media used for fermentation and assimilation tests. Consequently, Coccidiascus, Endomyces, Endomycete-like species and Malassezia are excluded here, but are given in the keys to genera. Some species occur more than once in the key, depending on variability of fermentation and growth reactions. Data for Lalaria species are limited and members of this genus are omitted from the key. However, Lalaria is given in the Key to the genera of ascomycetous yeasts. Fellomyces horovitziae is characterized in the treatment of the genus Fellomyces, but the data were received too late for inclusion in this key. When sexual states are known for common anamorphic species, the taxon is given in the key under the teleomorphic name. For example, Candida lipolytica is given under Yarrowia lipolytica and Phaffia rhodozyma is given as Xanthophyllomyces dendrorhous. Known anamorph-teleomorph connections can be made by consulting the indexes. Species separations in this key are often made from the reaction on a single test. Consequently, species descriptions need to be consulted to verify the identification. #

Test

Positive

Negative

1

Diazonium Blue B reaction

, ^

2

2

Glucose fermentation

, ^

3

^18

3

Erythritol growth

, ^

4

-^12

4

Sucrose growth

, ^

5

^

5

DL-Lactate growth

6

Growth at 37"C

7

Galactose fermentation

8

Galactose growth

Trichosporonoides

^318

spathulata: p. 876 . —^ 1

^

oedocephalis: p. 875

Moniliella

acetoabutens: p. 785

6

Moniliella suaveolens: p. 787

^ 8 Trichosporonoides

11

^ 9 Moniliella pollinis: p. 787

9

Lactose growth

10

D-Xylose growth

11

Succinate growth

12

Sucrose growth

13

Lactose growth

14

Nitrate growth

15

D-Glucosamine growth

16

Nitrate growth

Mrakia frigida. p. 676

17

Galactose growth

18

Nitrate growth

-^ 19

-> 151

19

Sucrose growth

^

^

20

Succinate growth

-^21

Trichosporonoides

^

10

madida: p. 873

Trichosporonoides megachiliensis: p. 874

Moniliella mellis: p. 786

Trichosporonoides nigrescens: p. 875

-^ 13

Sporopachydermia quercuum: p. 397

-^ 14

-^ 16

—^ 15

Cystofilobasidium lari-marini: p. 652

Mrakia frigida. p. 676

Cryptococcus aquaticus: p. 750

Filobasidium

capsuligenum. p. 664

20

-^ 17 Xanthophyllomyces

dendrorhous: p. 718

131

^122

21

D-Glucosamine growth

-^22

-> 48

22

Erythritol growth

-^23

-> 37

23

Lactose growth

^

24

-^ 34

24

D-Xylose growth

—> 25

Rhodotorula ferulica: p. 810

25

Galactose growth

-> 26

-^ 33

26

Growth at 3 7 T

-> 27

-^ 28

27

Ethanol growth

antarctica: p. 791

Pseudozyma aphidis: p. 792

Pseudozyma 891

892

Key to species /R.W. Payne et al.

Test

Negative

Positive

28

Ribitol growth

^29

-^ 32

29

Inositol growth

-^ 30

Rhodotorula acheniorum: p. 805

30

Galactitol growth

31

Citrate growth

Pseudozyma antarctica: p. 791

Pseudozyma prolifica: p. 794

32

Citrate growth

Pseudozyma tsukubaensis: p. 795

Sympodiomycopsis paphiopedili: p. 846

33

Growth at 37''C

Ustilago maydis: p. 796

. Fibulobasidium inconspicuum: p. 110

34

Ethanol growth

-^ 35

Pseudozyma flocculosa: p. 792

35

Inositol growth

36

Galactose growth

Fibulobasidium inconspicuum: p. 710

^

31

-^ 36

Rhodotorula diffluens: p. 810

Pseudozyma rugulosa: p. 794

Pseudozyma fusiformata: p. 793

37

Inositol growth

-> 38

^43

38

Ribitol growth

-^ 39

-^ 42

39

Galactitol growth

-^40

-> 41

40

L-Sorbose growth

41

a-Methyl-D-glucoside growth

Cryptococcus aerius: p. 747

Filobasidium floriforme: p. 666

Filobasidium floriforme: p. 666

42

Itersonilia perplexans: p. 775

Galactitol growth

Cryptococcus yarrowii: p. 765

Itersonilia perplexans: p. 775

43

Galactitol growth

Rhodotorula muscorum: p. 822

44

a-Methyl-D-glucoside growth

45

Ethanol growth

46

Galactose growth

-^ 47

Leucosporidium fellii: p. 671

47

L-Sorbose growth

Erythrobasidium hasegawianum: p. 654

Itersonilia perplexans: p. 775

48

Inositol growth

-^ 49

^

49

D-Xylose growth

-^ 50

-^ 69

50

Erythritol growth

-^ 51

^

51

Citrate growth

-> 52

52

Ribitol growth

^53

53

DL-Lactate growth

54

Galactose growth

55

Vitamin-free growth

56

Vitamin-free growth

^

44

-^ 45

-^46

Rhodotorula fragaria: p. 811

Rhodotorula ingeniosa: p. 817

-^ 54

73

63

-^ 62 ^

61

-^58

-^ 55

-^ 56

Tilletiopsis albescens: p. 848

Cryptococcus albidus: p. 748

Tilletiopsis pallescens: p. 851

57

Soluble starch growth

58

Vitamin-free growth

59

L-Arabinitol growth

60

10% NaCl/5% glucose growth

61

Gelatin liquefaction

62

Ribitol growth

63

Ethanol growth

-^ 57 Tilletiopsis pallescens: p. 851

Cryptococcus albidus: p. 748 Pseudozyma fusiformata: p. 793

-^ 59

-^ 60

Tilletiopsis pallescens: p. 851

Trichosporon pullulans: p. 869

Trichosporon pullulans: p. 869

Cryptococcus albidus: p. 748

Cryptococcus macerans: p. 760

Cryptococcus albidus: p. 748

Tilletiopsis pallescens: p. 851

Sympodiomycopsis paphiopedili: p. 846

—^ 64

Cryptococcus antarcticus: p. 749

64

Ribitol growth

^

65

Galactitol growth

-^ 66

65

66

Starch formation

^

68

-^ 67

Cryptococcus albidus: p. 748

Bullera pyricola: p. 737

67

Maltose growth

Cryptococcus albidus: p. 748

Cryptococcus kuetzingii: p. 759

68

Raflfinose growth

Cryptococcus albidus: p. 748

. . . Cryptococcus albidosimilis: p. 747

69

Ribitol growth

^70

-> 72

70

Erythritol growth

Tilletiopsis pallescens: p. 851

71

Raflfinose growth

Bullera punicea: p. 739

. Sporobolomyces inositophilus: p. 833

72

Citrate growth

Rhodotorula hinnulea: p. 816

Rhodotorula phylloplana: p. 824

73

Lactose growth

74 75

^

71

—^ 74

^

84

Raflfinose growth

-^ 75

^

81

Maltose growth

-^ 76

-^ 80

114. Key to species /R.W, Payne et al.

Test 76

893

Positive

Negative

Soluble starch growth

-> 77

Rhodotorula lactosa: p. 818 . . . . Sporobolomyces xanthus: p. 841

77

L-Arabinitol growth

-^ 78

78

Vitamin-free growth

Tilletiopsis pallescens: p. 851

-> 79

79

Pellicle formation

Tilletiopsis fuluescens: p. 850

Tilletiopsis minor: p. 851

80

Erythritol growth

Bensingtonia ingoldii: p. 724

Bensingtonia miscanthi: p. 726

81

Galactose growth

Rhodotorula hordea: p. 816

-^ 82

82

D-Xylose growth

-> 83

Bensingtonia phyllada: p. 727

83

Soluble starch growth

Sporobolomyces lactophilus: p. 834

Sporobolomyces tsugae: p. 841

84

Erythritol growth

-^85

-^ 87

85

Pellicle formation

—» 86

Rhodotorula bacarum: p. 808

86

L-Sorbose growth

Tilletiopsis pallescens: p. 851

. Tilletiopsis washingtonensis: p. 852

87

Starch formation

-> 88

-^ 92

88

Ribitol growth

-^89

-^ 90 Bullera punicea: p. 739

89

Galactose growth

Bullera megalospom: p. 735

90

Galactose growth

Cryptococcus bhutanensis: p. 751

-^ 91

91

A/^-Acetyl-D-glucosamine

Cryptococcus friedmannii: p. 754

. . . . Cryptococcus vishniacii: p. 765

92

Raflfinose growth

growth

93

Soluble starch growth

94

Ethanol growth

95

DL-Lactate growth

96

2-Keto-D-gluconate growth

98

Pellicle formation

99

a-Methyl-D-glucoside growth

^

-^ 94

-^ 102

^95

-> 100

-^ 97 Rhodosporidium

babjeuae: p. 679

115

^

-^ 96

Citrate growth

97

—> 93

98

, . Sporidiobolus salmonicolor: p. 697 . . . . Sporobolomyces roseus: p. 836 ....

Sporobolomyces roseus: p. 836

Sporobolomyces roseus: p. 836

^

99

Rhodosporidium diobouatum: p. 682

Bullera megalospora: p. 735

100 Pellicle formation

-^ 101

. . Bensingtonia naganoensis: p. 726

101 Melibiose growth

Tilletiopsis flava: p. 849

102 D-Xylose growth

....

Sporobolomyces roseus: p. 836

^103

-^ 114

103 Vitamin-free growth

—> 104

-^ 111

104 Pellicle formation

-^ 105

105 Galactitol growth

Sporidiobolus ruineniae: p. 696

^

106

Sporobolomyces roseus: p. 836

. Sporidiobolus salmonicolor: p. 697 Sporobolomyces roseus: p. 836

106 10% NaCl/5% glucose growth

-^ 107

Rhodosporidium paludigenum: p. 687

107 Growth at 37''C

-^ 108

-^ 109

toruloides: p. 690

Rhodotorula glutinis: p. 814

108 Inulin growth 109 DL-Lactate growth 110 Inulin growth 111 Maltose growth

Rhodosporidium

Rhodosporidium fluuiale: p. 683

-^ 110

kratochuilouae: p. 684

Rhodotorula graminis: p. 815

-^ 112

Sporobolomyces roseus: p. 836

Rhodosporidium

, .. 112 Pellicle formation 113 10% NaCl/5% glucose growth

Rhodotorula glutinis: p. 814

114 Growth at 37°C

Rhodotorula glutinis: p. 814

115 Maltose growth

-^ 116

116 Vitamin-free growth

-^ 117

117 10% NaCl/5% glucose growth 118 Pellicle formation 119 Soluble starch growth 120 10% NaCl/5% glucose growth

Sporobolomyces salicinus: p. 838

Sporobolomyces roseus: p. 836

-^ 118 Sporidiobolus johnsonii: p. 694 Sporobolomyces griseoflauus: p. 832 Rhodotorula glutinis: p. 814

-^ 113 Rhodosporidium

malvinellum: p. 686

Sporobolomyces roseus: p. 836 Sporobolomyces subbrunneus: p. 840 -^ 121 -> 119 . Sporidiobolus salmonicolor: p. 697 Rhodotorula glutinis: p. 814 -^ 120 . . . . Rhodotorula aurantiaca: p. 807

894

#

Key to species /R.W. Payne et al.

Test

Negative

Positive

121 Ethanol growth

Sporidiobolus salmonicolor: p. 697

Sporobolomyces foliicola: p. 831

122 Inositol growth

-^ 123

-> 125

123 Melibiose growth 124 Arbutin growth 125 D-Glucosamine growth

Cystofilobasidium bisporidii: p. 646

-^ 124

Cystofilobasidium infirmominiatum: p. 650

Cystofilobasidium capitatum: p. 648

Leucosporidium scottii: p. 673

-> 126

-^ 127

-^ 129

Sporidiobolus ruineniae: p. 696

-^ 128

Sporidiobolus salmonicolor: p. 697

. . Rhodosporidium sphaerocarpum: p. 688

126 Ribitol growth 127 Galactitol growth 128 DL-Lactate growth 129 Vitamin-free growth

Leucosporidium antarcticum: p. 671

-^ 130

Kurtzmanomyces tardus: p. 781

Rhodotorula pilati: p. 824

131 Inositol growth

-^ 132

-> 134

132 L-Sorbose growth

-^ 133

Cryptococcus fiiscescens: p. 754

Cryptococcus terreus: p. 764

Cryptococcus feraegula: p. 753

130 Ethanol growth

133 Lactose growth 134 D-Glucosamine growth

—> 135

135 Galactitol growth

Cryptococcus huempii: p. 757

136 L-Sorbose growth

—> 137

^

139

-^ 136 ^

138

Rhodotorula bujfonii: p. 809

Rhodotorula pustula: p. 825

138 Galactose growth

Sporobolomyces falcatus: p. 831

Rhodotorula foliorum: p. 811

139 Erythritol growth

Sterigmatomyces halophilus: p. 845

140 Succinate growth

-^ 141

-^ 150

141 Melibiose growth

Rhodotorula jauanica: p. 818

-^ 142

142 Raflfinose growth

—^ 143

143 Starch formation

Cryptococcus uishniacii: p. 765

Sporobolomyces roseus: p. 836

-^ 145

-^ 147

137 Maltose growth

144 Ethanol growth 145 Galactitol growth 146 L-Sorbose growth 147 Ribitol growth

Rhodosporidium

^

^

140

144

-^ 146

Bensingtonia ciliata: p. 724

lusitaniae: p. 685

. . . Sporobolomyces kluyueri-nielii: p. 834

-^ 148

^

149

148 L-Sorbose growth

Bensingtonia yuccicola: p. 729

149 Galactose growth

Rhodotorula sonckii: p. 826

Cryptococcus uishniacii: p. 765

Rhodotorula araucariae: p. 806

Leucosporidium antarcticum: p. 671

150 Ribitol growth

Kurtzmanomyces nectairei: p. 780

151 Inositol growth

-^ 152

^

239

152 Sucrose growth

-^ 153

^

229

153 Maltose growth

-^ 154

-^ 225

154 Vitamin-free growth

-^ 155

155 Ribitol growth

-^ 156

Cryptococcus podzolicus: p. 762

156 Galactitol growth

-^ 157

-^ 159

^

160

157 Melibiose growth

Cryptococcus laurentii: p. 759

158 Erythritol growth

Sirobasidium intermedium: p. 710

Holtermannia cornifiyrmis: p. 711

159 Melibiose growth

Hyalodendron lignicola: p. 773

Cryptococcus curuatus: p. 752

-^ 161

-> 214

160 a-Methyl-D-glucoside growth

^

158

161 Ethanol growth

-^ 162

-^ 199

162 Erythritol growth

—» 163

^

163 Lactose growth

-^ 164

-> 184

164 Melibiose growth

-^ 165

-> 174

Trichosporon mucoides: p. 868

-^ 166

165 Growth at 37°C

186

166 Galactitol growth

-^ 167

^

167 D-Glucosamine growth

-> 168

-^ 171

168 DL-Lactate growth

—> 169

Sterigmatosporidium

172

polymorphum: p. 700

895

114. Key to species /R.W. Payne et al.

#

Test

169 Inulin growth

Positive

Negative

. . . . Bulleromyces albus: p. 641

-^ 170

Cryptococcus humicolus: p. 757 170 50% Glucose growth

. . Trichosporon jirouecii: p. 864

Cryptococcus humicolus: p. 757

171 Inulin growth

. . . . Bulleromyces albus: p. 641

Cryptococcus laurentii: p. 759

-^ 173

Bullera miyagiana: p. 736

172 L-Arabinitol growth 173 Inulin growth

. . . . Bulleromyces albus: p. 641

174 50% Glucose growth

-^ 175

175 L-Arabinitol growth

^

176 A/^-Acetyl-D-glucosamine growth 177 D-Glucosamine growth

- -^ 179 Trichosporon asteroides: p. 858

Trichosporon ....

coremiiforme: p. 859

Trichosporon asteroides: p. 858

Trichosporon ouoides: p. 869

Trichosporon inkin: p. 863

Bulleromyces albus: p. 641

- -> 182

182 Galactitol growth

^ 183 Fibulobasidium . . . Cryptococcus

185 Pellicle formation

180

•^ 178

180 L-Rhamnose growth

184 50%) Glucose growth

^

Trichosporon faecale: p. 862

Trichosporon asahii: p. 857

179 Nitrite growth

181 Inulin growth

-> 181

176

-^ 177

178 Growth at 4 0 T

183 D-Glucosamine growth

Trichosporon cutaneum: p. 860 Trichosporon moniliiforme: p. 866

inconspicuum: p. 710

Cryptococcus curuatus: p. 752 heveanensis: p. 756

Cryptococcus

amylolentus: p. 749

- -^ 185

Bullera sinensis: p. 739

Cryptococcus luteolus: p. 760

186 L-Rhamnose growth

^ 187

187 Lactose growth

Trichosporon

monteuideense: p. 867

-> 188

• ^ 197

Bulleromyces albus: p. 641

-> 189

189 D-Glucosamine growth

-^ 190

^ 196

190 Galactitol growth

^

191

-> 194

191 L-Sorbose growth

-^ 192

^ 193

192 Melibiose growth

. . . Tremella encephala: p. 714 . . Tremella indecorata: p. 716 Trichosporon laibachii: p. 865

Tremella aurantia p.712 Tremella encephala. p. 714 Tremella indecorata: p.716

193 Melibiose growth

...

188 Inulin growth

Bullera pseudoalba: p. 738

Tremella aurantia: p.712

-> 195

Trichosporon sporotrichoides: p. 870

194 Ribitol growth 195 Melibiose growth 196 Melibiose growth 197 L-Sorbose growth 198 D-Glucosamine growth

. Trichosporon loubieri: p. 866 Cryptococcus

laurentii: p. 759

Tremella aurantia: p.712 Bullera dendrophila: p. 733

-^ 198 . Filobasidiella neoformans var. neoformans: p. 656 . Filobasidiella neoformans var. bacillispora: p. 657 Tremella indecorata: p 716

199 Inulin growth

200

200 Lactose growth

201

Holtermannia

corniformis: p.711 - -> 202

Filobasidium

uniguttulatum: p. 667

Bulleromyces albus: p 641

Cryptococcusflauus: p. 754

202 D-Glucosamine growth

-> 203

^ 212

203 Melibiose growth

-^ 204

- ^ 211

204 Soluble starch growth

-> 205

Cryptococcus luteolus: p. 760

205 Galactitol growth

^206

- ^ 210

206 Starch formation

-^ 207

Fellomyces polyborus: p. 771 Trimorphomyces papilionaceus: p.717

^208 Bullera variabilis: p. 740 Fellomyces penicillatus: p. 770 Bullera oryzae: p. 736 Trimorphomyces papilionaceus: p. 717 Tremella moriformis: p. 717

- ^ 209 Fellomyces penicillatus: p. 770 p.717 Trimorphomyces papilionaceus: p. 740 Bullera variabilis: p. 778 Kockovaella thailandica: p. 750 Cryptococcus ater:

201 Starch formation

207 L-Sorbose growth 208 Pellicle formation 209 Nitrite growth 210 DL-Lactate growth 211 Ribitol growth

Key to species /R.W. Payne et al.

896

Test 212 A'^-Acetyl-D-glucosamine

Negative

Positive

-^ 213

Cryptococcus hungaricus: p. 758

growth 213 Ribitol growth

Cryptococcus laurentii: p. 759

214 Erythritol growth 215 Galactitol growth

..

Cryptococcus magnus: p. 761 ^216

-^ 215 Fellomyces fuzhouensis: p. 769

216 DL-Lactate growth

. . Cryptococcus curvatus: p. 752 ^

-^ 217

223

217 Raffinose growth

^218

-^221

218 Galactose growth

-^ 219

. . Trichosporon dulcitum: p. 861

219 D-Glucosamine growth

Bullera armeniaca: p. 732

-^ 220

220 L-Sorbose growth

Cryptococcus hungaricus: p. 758

Bullera globispora: p. 734

221 Galactitol growth

Holtermannia corniformis: p. 711

-^ 222 ...

Trichosporon gracile: p. 862

222 Galactose growth

Trichosporon brassicae: p. 859

223 Galactitol growth

Kockouaella imperatae: p. 777

-^224

224 L-Sorbose growth

Kockouaella thailandica: p. 778

. . . Itersonilia perplexans: p. 775

225 Erythritol growth

-^ 226

226 Galactitol growth

Fellomyces fuzhouensis: p. 769

227 Galactitol growth

Cryptococcus dimennae: p. 753

228 Galactose growth

Itersonilia perplexans: p. 775

229 Succinate growth

-^ 230

230 Citrate growth

-^ 231

231 L-Rhamnose growth

—» 232

236 Ribitol growth

228

Trichosporon gracile: p. 862 ^238 ^236

...

Trichosporon gracile: p. 862

—> 233

-^ 234 . . . . Trichosporon asahii: p. 857

-^ 235

. . Cryptococcus skinneri: p. 763

Holtermannia corniformis: p. 711

Tremella foliacea: p. 714

234 Maltose growth 235 Soluble starch growth

^ ...

Sirobasidium magnum: p. 711

232 Lactose growth 233 Galactitol growth

^227 . . Tsuchiyaea wingfieldii: p. 878

Sporopachydermia

lactatiuora: p. 396

^

237

237 D-Xylose growth

Cryptococcus gastricus: p. 755

Cryptococcus giluescens: p. 756

238 Ethanol growth

Cryptococcus marinus: p. 762

Filobasidium globisporum: p. 667

239 Melibiose growth

-^ 240

-^ 247

240 L-Sorbose growth

-^ 241

-^ 243

241 Ethanol growth

-^ 242

-^ 210

242 Erythritol growth

Tremella fuciformis: p. 715

Ascoidea africana: p. 137

243 Galactitol growth

Bullera crocea: p. 733

-^ 244

244 Erythritol growth

Hyalodendron lignicola: p. 773

-^ 245

245 a-Methyl-D-glucoside growth

Sporobolomyces ruber: p. 837

-^ 246

246 Galactose growth

Itersonilia perplexans: p. 775

Tilletiaria anomala: p. 703

247 Erythritol growth

-^248

^

260

248 Maltose growth

^249

^

255

Trichosporon asahii: p. 857

^

250

249 L-Rhamnose growth 250 Sucrose growth

—^ 251

251 Ribitol growth

-^ 252

252 Lactose growth

Tremella cinnabarina: p. 713

-^ 253 ..

Trichosporon aquatile: p. 856

. . . . Tremella globispora: p. 715

253 D-Xylose growth

Tremella brasiliensis: p. 712

-> 254

254 Galactose growth

Prototheca stagnora: p. 885

. . Prototheca moriformis: p. 884

255 Sucrose growth 256 Galactitol growth 257 a-Methyl-D-glucoside growth 258 D-Xylose growth 259 2-Keto-D-gluconate growth

—> 256

-^ 258

Sterigmatomyces eluiae: p. 844

-^ 257

Agaricostilbum hyphaenes: p. 639

Rhodotorula acuta: p. 805

-^ 259

Prototheca ulmea: p. 885

Sterigmatomyces halophilus: p. 845

. . . Tremella mesenterica: p. 716

897

114. Key to species /R.W. Payne et al.

#

Test

260 Starch formation 261 Ribitol growth

—> 261 Tremella coalescens: p. 713

262 Maltose growth 263 Melezitose growth 264 Sucrose growth

Negative

Positive

^265 -^ 262

—^ 263

-> 264

Cryptococcus vishniacii: p. 765

Filobasidium elegans: p. 665

Cryptococcus consortionis: p. 751

Chionosphaera apobasidialis: p. 644

265 Inulin growth

-^ 266

-> 270

266 Sucrose growth

-^ 267

267 L-Arabinitol growth

Sporobolomyces alborubescens: p. 830

^

268

Itersonilia perplexans: p. 775

Prototheca stagnora: p. 885

-^269

Prototheca moriformis: p. 884

Prototheca ulmea: p. 885

270 a-Methyl-D-glucoside growth

-^ 271

-> 275

271 Sucrose growth

-^ 111

-> 268

272 2-Keto-D-gluconate growth

Sporobolomyces oryzicola: p. 835

-^273

273 Pellicle formation

Sporidiobolus pararoseus: p. 694

-^ 274 ., Rhodotorula mucilaginosa: p. 820

268 Galactose growth 269 Maltose growth

274 Soluble starch growth

Rhodotorula marina: p. 819

275 Soluble starch growth

-^ 276

^

276 Melezitose growth

-^ 277

^279

280

277 L-Sorbose growth

Rhodotorula bogoriensis: p. 808

-^ 278

278 Galactose growth

Itersonilia perplexans: p. 775

. . . Bensingtonia yamatoana: p. 729

Bensingtonia subrosea: p. 728

. . . Sporobolomyces sasicola: p. 839

279 Ethanol growth 280 Succinate growth

-^ 281

^

281 50% Glucose growth

-^282

^

286

282 Galactose growth

-^ 283

^

285

283 D-Xylose growth

Rhodotorula nothofagi: p. 823

-^284

Prototheca stagnora: p. 885

. . . . Prototheca wickerhamii: p. 886

285 D-Xylose growth

Rhodotorula lignophila: p. 818

-^ 269

286 Raflfinose growth

Rhodotorula mucilaginosa: p. 820

284 Maltose growth

312

-^ 287

287 D-Glucosamine growth

-H> 288

^

288 Galactose growth

-^ 284

-^289

Prototheca moriformis: p. 884

^290

289 Maltose growth 290 Vitamin-free growth

Rhodotorula philyla: p. 823

291

Prototheca ulmea: p. 885

291 D-Xylose growth

-^ 292

^

292 Sucrose growth

—» 293

-^ 298

Sporobolomyces phyllomatis: p. 835

-^ 294

293 Galactitol growth

301

Sporobolomyces elongatus: p. 830

-^ 295

-^ 296

-^297

296 L-Sorbose growth

Bensingtonia intermedia: p. 725

. . . Bensingtonia yamatoana: p. 729

297 Citrate growth

Bensingtonia intermedia: p. 725

Rhodotorula minuta: p. 820

294 L-Rhamnose growth 295 Maltose growth

^299

-^ 300

299 Galactitol growth

Rhodotorula futronensis: p. 813

. . . Bensingtonia intermedia: p. 725

300 Galactose growth

Rhodotorula armeniaca: p. 806

. . . . Sporobolomyces gracilis: p. 832

298 Ethanol growth

-^ 302

^

302 Galactose growth

—» 303

^

306

303 Maltose growth

-^ 304

^

305

301 DL-Lactate growth

309

304 Trehalose growth

Rhodosporidium

dacryoideum: p. 680

Prototheca stagnora: p. 885

305 D-Gluconate growth

Rhodosporidium

dacryoideum: p. 680

. . . . Prototheca wickerhamii: p. 886

306 Trehalose growth

Sporobolomyces singularis: p. 839

^

307

307 Maltose growth

Prototheca moriformis: p. 884

-> 308

308 D-Mannitol growth

Rhodotorula hylophila: p. 817

Prototheca ulmea: p. 885

Key to species /R.W. Payne et al.

#

Test

309 Ribitol growth

Positive

Negative -> 310

-^ 311

310 D-Mannitol growth

Bensingtonia intermedia: p. 725

-> 268

311 D-Mannitol growth

Rhodotorula auriculariae: p. 807

-^ 268

312 D-Mannitol growth

-^ 313

313 Ethanol growth

-^314

Reniforma strues: p. 798

Rhodotorula fujisanensis: p. 812

Bensingtonia yamatoana: p. 729

314 Galactitol growth 315 Maltose growth 316 Hexadecane growth

^

315

-^ 316

-^ 317

Prototheca zopfii var. hydrocarbonea: p. 886

Prototheca moriformis: p. 884 Prototheca zopfii var. zopfii: p. 886 Prototheca zopfii var. portoricensis: p. 886

317 Galactose growth

Prototheca wickerhamii: p. 886

Prototheca ulmea: p. 885

318 Inositol growth

-^ 319

-^ 361

319 Nitrate growth

-^ 320

-^ 328

320 Glucose fermentation

-^ 321

-^ 324

321 Galactose fermentation

-^ 322

-> 323

322 Galactitol growth

Pichia ofunaensis: p. 328

Arxula adeniniuorans: p. 441

323 Erythritol growth

Candida incommunis: p. 513

Candida ualdiuiana: p. 566

324 Melibiose growth

-^ 325

Arxula terrestris: p. 442

325 10% NaCl/5% glucose growth 326 Inulin growth 327 Galactitol growth

^326

^

327

Aureobasidium pullulans: p. 123

Stephanoascus smithiae: p. 402

Stephanoascus smithiae: p. 402

Candida bertae: p. 486

328 D-Glucosamine growth

-^ 329

-^ 341

329 Ribitol growth

-> 330

Candida paludigena: p. 536

330 L-Sorbose growth

-^ 331

-^ 340

331 Erythritol growth

-^ 332

-> 339

332 Ethanol growth

-^333

-^ 338

333 Melibiose growth

-^ 334

^

334 Galactitol growth

-^ 335

Candida santjacobensis: p. 550

335 Raffinose growth

Blastobotrys proliferans: p. 447

Blastobotrys niuea: p. 446

336 L-Rhamnose growth

336

-^ 337

Candida auringiensis: p. 484

Candida blankii: p. 487

Blastobotrys capitulata: p. 445

338 Glucose fermentation

Blastobotrys aristata: p. 444

Candida chiropterorum: p. 495

339 Glucose fermentation

Zygoascus hellenicus: p. 422

Ascoidea hylecoeti: p. 138

340 Ethanol growth

Pichia tannicola: p. 345

Sympodiomyces parous: p. 603

341 Sucrose growth

—> 342

-> 357

342 DL-Lactate growth

-^ 343

^

349

343 L-Rhamnose growth

-^ 344

^

346

337 Melezitose growth

344 Lactose growth

-^ 345

Stephanoascus ciferrii: p. 400

345 Melibiose growth

Myxozyma monticola: p. 595

Candida blankii: p. 487

346 Galactitol growth

Myxozyma geophila: p. 593

347 Glucose fermentation 348 Ribitol growth

Saccharomycopsis fibuligera: p. 377 Myxozyma udenii: p. 596

-^ 347 ^

348

Candida castrensis: p. 493

349 Melibiose growth

-^ 350

350 Erythritol growth

-> 351

-^ 353

351 L-Sorbose growth

Lipomyces starkeyi: p. 252

-^ 352

^

355

Lipomyces tetrasporus: p. 252 352 0.01% Cycloheximide growth 353 Growth at 37°C 354 Vitamin-free growth

Lipomyces starkeyi: p. 252

Ascoidea rubescens: p. 139

. . . Dipodascopsis uninucleata var. uninucleata: p. 179

-^ 354

Lipomyces starkeyi: p. 252

Myxozyma kluyueri: p. 593

899

114. Key to species /R.W. Payne et al.

#

Test

355 Erythritol growth 356 Lactose growth 357 Erythritol growth 358 L-Sorbose growth 359 Ribitol growth 360 Galactose growth

Negative

Positive Candida blankii: p. 487

-^ 356

Dipodascopsis tothii: p. 178

Pichia inositouora: p. 313

^358 Sporopachydermia cereana: p. 395

-^ 359 Saccharomycopsis synnaedendra: p. 382

-^ 360

Zygozyma oligophaga: p. 434

Myxozyma melibiosi: p. 594

Dipodascopsis uninucleata var. wickerhamii: p. 179

361 Nitrate growth

-^362

-> 442

362 Vitamin-free growth

^363

-^ 376

363 Erythritol growth

^364

-^ 367

364 L-Rhamnose growth

-^365

-^ 366

Pichia sydowiorum: p. 344

Pichia ciferrii: p. 299

Pichia lynferdii: p. 317

Pichia anomala: p. 287

365 Melibiose growth 366 Inulin growth 367 Raffinose growth

-> 368

^

372

368 L-Sorbose growth

^

369

^

371

Citeromyces matritensis: p. 146

^

370

369 Glucose fermentation 370 Melibiose growth 371 Maltose growth 372 Glucose fermentation 373 Sucrose growth 374 D-Xylose growth 375 D-Mannitol growth 376 Inulin growth 377 Ethanol growth 378 Ribitol growth 379 Gelatin liquefaction 380 Cellobiose growth 381 Gelatin liquefaction 382 Cellobiose growth 383 Starch formation 384 Glucose fermentation 385 Erythritol growth 386 Glucose fermentation 387 Raflfinose growth 388 Sucrose growth 389 Lactose growth 390 D-Glucosamine growth 391 L-Sorbose growth 392 DL-Lactate growth 393 Galactose fermentation 394 Cellobiose growth 395 D-Glucosamine growth 396 Galactose fermentation 397 Galactose fermentation 398 Citrate growth 399 Sucrose growth 400 L-Sorbose growth 401 Soluble starch growth

Saitoella complicata: p. 600 Pichia jadinii: p. 314

Williopsis saturnus var. saturnus: p. 416

Williopsis saturnus var. saturnus: p. 416

Williopsis saturnus var. suaueolens: p. 417

-^373 Candida vartiouaarae: p. 567

-^ 375 ^

374

. , Williopsis saturnus var. mrakii: p. 417

Candida berthetii: p. 487

Pichia dryadoides: p. 301

Ascoidea corymbosa: p. 137

^377 Protomyces lactucaedebilis: p. 355 ^379 Protomyces inundatus: p. 354 Protomyces pachydermus: p. 356 Protomyces inouyei: p. 354 Protomyces pachydermus: p. 356 Protomyces grauidus: p. 354 ^384 Candida glucosophila: p. 510 ^386 -^387 Pichia subpelliculosa: p. 344 -^ 389 Candida chilensis: p. 495 ^391 -^ 392 Candida ishiwadae: p. 516 Pichia silvicola: p. 340 -> 395

Pichia capsulata: p. 296 Pichia silvicola: p. 340 Candida nanaspora: p. 530 ^399 Pichia methyliuora: p. 321 Pichia finlandica: p. 305 ^402

^

383

-^ 378 ^

381

-> 380 Protomyces inundatus: p. 354 -^ 382 Protomyces macrosporus: p. 355 ^

385

Oosporidium margaritiferum: p. 598 -^ 401 ^

398

^

388

^

394

-^ 390 -> 393 Ambrosiozyma platypodis: p. 132 Pichia holstii: p. 312 Pichia angusta: p. 286 -^ 397 ^

396

Pichia glucozyma: p. 307 Candida boidinii: p. 488 ^400 Pichia philodendri: p. 333 Pichia henricii: p. 311 ^405

900

Key to species /R.W. Payne et al.

Test 402 Ribitol growth 403 Galactose growth

Positive

Negative ^403

-^ 404

Pichia holstii: p. 312

Candida ernobii: p. 501 Ascoidea corymbosa: p. 137

404 D-Mannitol growth

Pichia fabianii: p. 303

405 Melezitose growth

-^406

^416

406 L-Rhamnose growth

^407

^414

407 Raffinose growth

Pichia petersonii: p. 332

^408

408 D-Glucosamine growth

Candida populi: p. 541

^409

409 Galactose fermentation

Pichia siluicola: p. 340

^410

410 Growth at ?>TC

^411

411 Glucose fermentation

Pichia bimundalis: p. 291

412 Glucose fermentation

Pichia americana: p. 283

^412 Pichia canadensis: p. 295 ^413

Pichia bispora: p. 291 413 Pellicle formation 414 D-Mannitol growth

Pichia bispora: p. 291

Pichia alni: p. 282

Dekkera anomala: p. 174

^415 ....

415 Galactose growth

Williopsis pratensis: p. 415

416 Galactitol growth

Candida vanderwaltii: p. 566

Dekkera bruxellensis: p. 175

. . . . Pichia euphorbiiphila: p. 302 ^417

417 Glucose fermentation

^418

^440

418 D-Mannitol growth

-^419

^

419 A/^-Acetyl-D-glucosamine growth

^420

-^ 423

420 L-Sorbose growth 421 Cellobiose growth 422 Galactose fermentation 423 Hexadecane growth 424 DL-Lactate growth 425 Raffinose growth 426 L-Sorbose growth

-^ 421

Candida methanosorbosa: p. 526 ^422 Candida versatilis: p. 567

....

^

-^ 426

Williopsis saturnus var. subsufficiens: ip. 411 ^427

428 Ribitol growth

Pichia siluicola: p. 340

424

-^ 429

^425

Pichia siluicola: p. 340

Candida nitratophila: p. 531

. . . . Candida wickerhamii: p. 570

Candida uaccinii: p. 565

427 Ribitol growth

436

^428 ....

Williopsis californica: p. 413 Candida noruegica: p. 532

429 Galactose growth

^430

-^ 434

430 D-Gluconate growth

-^431

-^ 433

431 Galactose fermentation 432 Growth at 37"C 433 Ribitol growth 434 Ribitol growth 435 Cellobiose growth 436 Ribitol growth 437 D-Xylose growth 438 50% Glucose growth

Pichia siluicola: p. 340

-^ 432

Candida magnoliae: p. 521

Candida etchellsii: p. 502

Pachysolen tannophilus: p. 271

Candida etchellsii: p. 502

^435 Pichia minuta var. minuta: p. 324 Pichia siluicola: p. 340 Candida glucosophila: p. 510 ^439

Candida etchellsii: p. 502 Candida pignaliae: p. 539 ^437 ^438 Dekkera anomala: p. 174 . . . . Dekkera bruxellensis: p. 175

439 Sucrose growth 440 Ribitol growth 441 Cellobiose growth

Candida lactis-condensi: p. 519

-^ 441

Pichia populi: p. 335

Candida etchellsii: p. 502

442 Erythritol growth

^443

443 Sucrose growth

^444

444 Galactose growth

^445

445 Starch formation 446 Glucose fermentation

Candida etchellsii: p. 502

., Pichia minuta var. nonfermentans: p. 324

-^446 Blastobotrys aristata: p. 444

Wickerhamiella domercqiae: p. 411 ^

552

^

508

-^ 504 ^448 ^447

114. Key to species /R.W. Payne et al.

Test 447 0.1% Cycloheximide growth

901

Negative

Positive Lipomyces starkeyi: p. 252

Lipomyces lipofer: p. 251

Lipomyces tetrasporus: p. 252 448 D-Xylose growth

-^ 449

^

449 Vitamin-free growth

-^ 450

-^ 462

502

450 Pellicle formation

-^ 451

^457

451 Galactitol growth

-^ 452

^456

452 L-Sorbose growth

-^ 453

Pichia heimii: p. 311

453 Melibiose growth

—> 454

^455

454 Raffinose fermentation

Debaryomyces polymorphus: p. 166

Debaryomyces vanrijiae var. vanrijiae: p. 170

455 Raffinose fermentation

Debaryomyces polymorphus: p. 166

Debaryomyces vanrijiae var. yarrowii: p. 170

Debaryomyces robertsiae: p. 168

Pichia burtonii: p. 293

456 L-Rhamnose growth 457 Growth at 37''C 458 Melibiose growth

^458

^459

Candida silvicultrix: p. 555

Candida homilentoma: p. 512

-^ 460

-^461

460 Glucose fermentation

Candida fennica: p. 503

Lipomyces starkeyi: p. 252

461 Glucose fermentation

Candida rhagii: p. 545

Lipomyces starkeyi: p. 252

459 Citrate growth

462 Ethanol growth

-^ 463

^

463 Raflhnose growth

-^ 464

^482

464 2-Keto-D-gluconate growth

-^ 465

^480

465 D-Gluconate growth

-^ 466

-^ 478

466 10% NaCl/5% glucose growth

-^ 467

-^ 476

467 Hexadecane growth

-^ 468

-^473

Candida membranifaciens: p. 525 Debaryomyces hansenii var, hansenii: p. 161

-^469

468 Raffinose fermentation

501

Debaryomyces hansenii Yax.fabryi: p. 162 469 L-Rhamnose growth 470 Galactose fermentation

471 Growth at 37''C

472 Galactitol growth

473 Growth at 3TC 474 Propane 1,2 diol growth 475 Galactose fermentation

476 Melibiose growth 477 L-Rhamnose growth

-^ 470

-^472

-^ 471

Debaryomyces hansenii var. hansenii: p. 161 . . Debaryomyces hansenii vav.fabryi: p. 162 Debaryomyces udenii: p. 169

Debaryomyces hansenii war. fabryi: p. 162 Pichia mexicana: p. 322 Pichia scolyti: p. 339

Debaryomyces hansenii var. hansenii: p. 161 . . Debaryomyces hansenii yax.fabryi: p. 162 Pichia scolyti: p. 339

Candida friedrichii: p. 506 Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii wdx. fabryi: p. 162

. . . . Candida shehatae var. shehatae: p. 552 Debaryomyces hansenii var. hansenii: p. 161 . . Debaryomyces hansenii wav.fabryi: p. 162

-^474

-> 475

Candida entomophila: p. 500

. . Debaryomyces hansenii var.fabryi: p. 162

Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii war.fabryi: p. 162 Debaryomyces pseudopolymorphus: p. 167 Pichia scolyti: p. 339 Candida tenuis: p. 561

478 Melibiose growth

Candida entomophila: p. 500

479 DL-Lactate growth

Candida shehatae var. lignosa: p. 552

480 L-Rhamnose growth 481 Raffinose fermentation

Debaryomyces hansenii var. hansenii: . . Debaryomyces hansenii var.fabryi: Debaryomyces maramus: Debaryomyces nepalensis:

p. p. p. p.

161 162 163 164

^477 ....

Candida shehatae var. shehatae: p. 552

....

Candida shehatae var. shehatae: p. 552

^479

-^ 481

Candida entomophila: p. 500

Candida silvanorum: p. 554

Candida insectorum: p. 515

482 L-Rhamnose growth

-^483

^491

483 Galactitol growth

-^ 484

-> 485

Candida dendronema: p. 498

Pichia triangularis: p. 348

485 Citrate growth

-> 486

Pichia naganishii: p. 325

486 DL-Lactate growth

-^ 487

484 Galactose fermentation

^488

Key to species /R.W. Payne et al.

902

Test

Positive

487 Lactose growth

Negative Candida tenuis: p. 561 Pichia stipitis: p. 342

488 Lactose growth

Pichia nakazawae var. nakazawae: p. 327 Pichia stipitis: p. 342 ^489

Candida tenuis: p. 561

489 Galactose fermentation 490 L-Sorbose growth

-^490

Candida atlantica: p. 483

Candida naeodendra: p. 529

Candida homilentoma: p. 512

491 Glucose fermentation

^492

Candida aaseri: p. 476

492 Maltose growth

^493

Pichia methanolica: p. 321

493 Growth at 3 7 T

^494

494 2-Keto-D-gluconate growth

Pichia philogaea: p. 333

495 Pellicle formation

Candida diddensiae: p. 498

496 DL-Lactate growth

. Candida shehatae var. lignosa: p. 552

497 Soluble starch growth 498 Galactose fermentation

Candida butyri: p. 491 ^497 ^499

^498 Candida shehatae var. shehatae: p. 552

499 L-Arabinitol growth

Pichia nakazawae var. akitaensis: p. 327 ^

Candida atmosphaerica: p. 483

500 L-Arabinose growth 501 Lactose growth 502 Glucose fermentation 503 Melibiose growth

-^496 ^495

500

Candida ergastensis: p. 501

Candida coipomoensis: p. 496

Blastobotrys aristata: p. 444

Candida peltata: p. 538 ^

Candida sophiae-reginae: p. 556

503

Lipomyces starkeyi: p. 252 . . . . Ambrosiozyma cicatricosa: p. 130 . . . . Ambrosiozyma monospora: p. 131

. . . . Debaryomyces melissophilus: p. 164

505 Melibiose growth

Lipomyces starkeyi: p. 252

-^ 506

506 L-Sorbose growth

Candida mesenterica: p. 525

504 Growth at 37°C

507 L-Rhamnose growth

. . . . Ambrosiozyma philentoma: p. 131

508 Melibiose growth

-^509

509 Glucose fermentation

^

510 Cellobiose growth

507

-> 511 Pichia castillae: p. 298

Stephanoascus farinosus: p. 401

Pichia tannicola: p. 345

^512

512 Ethanol growth

-^ 513

513 L-Rhamnose growth

-^514 Candida succiphila: p. 559

515 Cellobiose growth

^

Ambrosiozyma ambrosiae: p. 129

510

511 Glucose fermentation

514 Galactose fermentation

-^ 505

Pichia pini: p. 334

-^ 543 ^

-^ 542 -^ 516 ^

515

Candida boidinii: p. 488

516 2-Keto-D-gluconate growth

^517

-^ 530

517 Maltose growth

^518

-^ 521

518 Galactose growth

^519

519 D-Gluconate growth 520 Growth at 37''C 521 Galactose fermentation 522 Cellobiose growth

...

Saccharomycopsis malanga: p. 379

. . . . Saccharomycopsis capsularis: p. 375

-> 522 Stephanoascus farinosus: p. 401 ^

524 Pellicle formation

^525

526 Hexadecane growth

520

Stephanoascus farinosus: p. 401

523 Trehalose growth

525 True hyphae

^

Candida sequanensis: p. 551

524

. . . . . . Stephanoascus farinosus: p. 401 ^527

^

523

Candida schatauii: p. 551 Candida boidinii: p. 488 -^ 526 Candida boleticola: p. 489 -> 528

527 Cellobiose growth

Stephanoascus farinosus: p. 401

Candida laureliae: p. 519

528 Cellobiose growth

-^ 529

Candida cantarellii: p. 492

529 Galactose growth

Stephanoascus farinosus: p. 401

Pichia pini: p. 334

530 Ribitol growth

-> 531

Candida pini: p. 540

531 Galactose growth

^

532

^

536

532 Growth at 2>TC

-^533

^

534

533 Maltose fermentation

Pichia acaciae: p. 282

Pichia farinosa: p. 304

903

114. Key to species / R.W. Payne et al.

Test 534 True hyphae 535 Galactitol growth

Negative

Positive . . . Stephanoascus farinosus: p. 401 Pichia methanolica: p. 321

^

535

Candida conglobata: p. 496

536 Trehalose growth

^537

-^ 540

537 Cellobiose growth

-^538

-^ 539

538 DL-Lactate growth

Candida oualis: p. 535

Pichia pini: p. 334

539 L-Sorbose growth

Pichia trehalophila: p. 347

. . Candida llanquihuensis: p. 520

540 Cellobiose growth

Pichia kodamae: p. 317

541 DL-Lactate growth

Candida boidinii: p. 488

. . . . Williopsis salicorniae: p. 416

. . . . Blastobotrys arbuscula: p. 444 . . . Stephanoascus farinosus: p. 401

Pichia pini: p. 334

543 D-Mannitol growth

-> 544

-^268

544 Maltose growth

-^545

-^ 547

545 Lactose growth

Blastobotrys elegans: p. 446

-^ 546

Pichia media: p. 318

. . Debaryomyces coudertii: p. 160

547 Galactitol growth

-> 548

-^ 550

548 Trehalose growth

Candida nemodendra: p. 531

-> 549

549 D-Xylose growth

Pichia haplophila: p. 310

. . Candida fermenticarens: p. 504

550 Trehalose growth

-^551

Yarrowia lipolytica: p. 420

551 Galactose growth

Candida psychrophila: p. 542

Pichia pini: p. 334

542 Galactose growth

546 L-Sorbose growth

^

541

552 True hyphae

-^553

^

609

553 L-Rhamnose growth

-^554

^

560

554 Melezitose growth

-> 555

555 Galactose growth

Candida tenuis: p. 561

556 Glucose fermentation 557 Ribitol growth

^557

-^ 556 Pichia canadensis: p. 295

Pichia wickerhamii: p. 349

-> 558

-^559

Pichia rhodanensis: p. 338

558 L-Arabinose growth 559 Sucrose fermentation

Pichia meyerae: p. 323

Pichia euphorbiae: p. 301

. . . Pichia mississippiensis: p. 325

560 Cellobiose growth

-^561

-^ 580

561 D-Mannitol growth

^562

^

562 Galactose growth

-^ 563

-^ 573

563 Trehalose growth 564 Growth at 37°C

578

-^564

-^ 571

Candida tropicalis: p. 563

-^ 565

Candida uiswanathii: p. 570 565 DL-Lactate growth

^566

566 Ethanol growth 567 L-Sorbose growth

-^567 Cephaloascus albidus: p. 143

568 Sucrose growth 569 Galactose fermentation 570 L-Sorbose growth 571 Glucose fermentation 572 L-Sorbose growth

^569 Candida railenensis: p. 544 . Metschnikowia hawaiiensis: p. 261 . . . . Geotrichum fermentans: p. 576 . . Dipodascus macrosporus: p. 189

573 Ethanol growth

^574

574 Ribitol growth 575 Sucrose growth 576 Soluble starch growth

-^575 Aciculoconidium

aculeatum: p. 439

Pichia amylophila: p. 285

-^ 568 Protomyces inouyei: p. 354 Candida lyxosophila: p. 521 . Stephanoascus farinosus: p. 40\ -> 570 . . . Candida tanzawaensis: p. 561 -> 572 . . Dipodascus armillariae: p. 184 -^ 577 -^ 576 Saccharomycopsis malanga: p. 379 . . . Pichia mississippiensis: p. 325 . Protomyces pachydermus: p. 356

577 L-Arabinose growth

Protomyces inouyei: p. 354

578 D-Xylose growth

Dipodascus spicifer: p. 191

-> 579

579 Galactose growth

Geotrichum clauatum: p. 575

. . . Eremothecium gossypii: p. 204

580 Galactose growth

^581

^

596

904

#

Key to species /R.W. Payne et al.

Test

Negative

Positive

581 D-Xylose growth

-^ 582

582 Maltose growth 583 Trehalose growth

-^583

^

Candida albicans: p. 476

584 Vitamin-free growth

-^ 585

585 L-Arabinose growth

Cephaloascus fragrans: p. 144

584

Dipodascus geniculatus: p. 187 ^ ....

586

Galactomyces geotrichum: p. 210 Geotrichum klebahnii: p. 578

-^ 587

-^ 589

Dipodascus aggregatus: p. 182

-^ 588

586 D-Mannitol growth 587 Citrate growth

-^ 590

Galactomyces citri-aurantii: p. 209 588 Growth at 37°C 589 Ribitol growth

Dipodascus australiensis: p. 185

Dipodascus albidus: p. 183

Saccharomycopsis selenospora: p. 381

Galactomyces reessii: p. 212

-^ 591

-^ 592

591 D-Mannitol growth

Dipodascus magnusii: p. 189

. . . Eremothecium cymbalariae: p. 204

592 D-Mannitol growth

-^ 593

590 Sucrose growth

593 Glucose fermentation

594

Geotrichum fragrans: p. 577

Dipodascus ambrosiae: p. 184

-> 595

Dipodascus ouetensis: p. 190 Geotrichum fragrans: p. 577

Dipodascus tetrasperma: p. 192

Dipodascus capitatus: p. 186

594 Growth at 37''C 595 Glucose fermentation

^

Geotrichum fragrans: p. 577 ^597

-> 603

597 Raffinose growth

^598

. . . . Eremothecium sinecaudum: p. 205

598 Trehalose growth

-^ 599

Schizosaccharomyces japonicus: p. 391

599 Ethanol growth

-> 600

^

602

Eremothecium coryli: p. 202

^

601

596 Growth at 3 7 T

600 Glucose fermentation 601 a-Methyl-D-glucoside growth

Eremothecium cymbalariae: p. 204

Eremothecium gossypii: p. 204

602 a-Methyl-D-glucoside growth

Eremothecium cymbalariae: p. 204

Eremothecium ashbyi: p. 201 Eremothecium gossypii: p. 204

603 Ethanol growth 604 DL-Lactate growth

-^ 604

-^ 605

-^ 606

-^ 607

605 Glucose fermentation 606 2-Keto-D-gluconate growth 607 A'^-Acetyl-D-glucosamine

-^ 608

Saccharomycopsis crataegensis: p. 376

Saccharomycopsis uini: p. 383 Saccharomycopsis jauanensis: p. 379

. Saccharomycopsis fermentans:

^.'^11

. .. Saccharomycopsis schoenii: p. 380

growth 608 D-Mannitol growth

Protomyces pachydermus: p. 356

609 Starch formation

^610

610 Sucrose growth

-^ 611

611 Melibiose growth

—> 354

612 D-Mannitol growth

—> 613

613 Maltose growth

-^ 614

614 Ethanol growth

Myxozyma mucilagina: p. 595

615 Ribitol growth

Myxozyma vanderwaltii: p. 596

616 Ethanol growth

Zygozyma smithiae: p. 434

617 Ethanol growth

-^ 618

618 Ribitol growth

-^ 619

Candida amapae: p. 479 -> 623 -^ 617 -> 612 -^ 615 Lipomyces japonicus: p. 249 -^ 577 -^ 616 . . Schizosaccharomyces pombe: p. 393 -^ 621 ^

620

619 D-Mannitol growth

Zygozyma suomiensis: p. 435

Myxozyma lipomycoides: p. 594

620 Galactitol growth

Zygozyma oligophaga: p. 434

Dipodascus ingens: p. 188

621 Trehalose growth

Zygozyma arxii: p. 433

622 Glucose fermentation 623 Sucrose growth 624 Glucose fermentation

Schizosaccharomyces

octosporus: p. 392

^

622

Babjevia anomala: p. 141

—> 624

^

-^ 625

-> 800

826

905

114. Key to species /R.W. Payne et al.

Test

Positive

Negative

625 D-Mannitol growth

-^ 626

626 Ethanol growth

-^ 627

-^ 770

627 Maltose growth

-^ 628

-^ 753

628 Trehalose growth

-^ 629

^

746

629 Galactose growth

-^ 630

^

721

630 Cellobiose growth

-^ 631

-^ 696

631 2-Keto-D-gluconate growth

-^ 632

-^ 689

632 Melibiose growth

-^ 633

-^ 638

^634

Debaryomyces occidentalis var. occidentalis: p. 165

634 Ribitol growth

-^ 635

Zygosaccharomyces fermentati: p. 427

635 L-Arabinose growth

-^ 636

633 10% NaCl/5% glucose growth

636 Growth at 37°C

Debaryomyces hansenii var.fabryi: p. 162 Pichia guilliermondii: p. 308

-^ 775

^

637

Debaryomyces castellii: p. 159 Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii \ar.fabryi: p. 162

637 DL-Lactate growth

Candida salmanticensis: p. 548

Candida melibiosica: p. 524

638 Pellicle formation

-^ 639

-> 647

639 Raffinose growth

-^ 640

-^ 645

640 D-Xylose growth

-» 641

Pichia ohmeri: p. 329

641 L-Arabinitol growth

-^ 642

642 Vitamin-free growth

Debaryomyces vanrijiae var. yarrowii: p. 170

643 Galactose fermentation

^

643

Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii var. fabryi: p. 162

Candida intermedia: p. 516

^

644

Debaryomyces hansenii var. hansenii: p. 161 644 Vitamin-free growth 645 Galactose fermentation 646 Melezitose growth

Debaryomyces vanrijiae var. yarrowii: p. 170

Debaryomyces hansenii var. hansenii: p. 161

—» 646

Candida tanzawaensis: p. 561

Candida oleophila: p. 533

Pichia segobiensis: p. 340

647 Vitamin-free growth

-^ 648

648 L-Arabinose growth

Candida kruisii: p. 518

^

649

Candida sake: p. 547

649 Galactitol growth

-^ 650

-^ 653

650 D-Gluconate growth

—^ 651

Candida shehatae var. lignosa: p. 552

651 Raffinose growth

-^ 652

Debaryomyces yamadae: p. 171

652 L-Arabinose growth

Debaryomyces hansenii var. hansenii: p. 161

p. 541

Candida pseudointermedia:

Debaryomyces hansenii Yar.fabryi: p. 162 653 Soluble starch growth 654 Inulin growth 655 10% NaCl/5% glucose growth

-^ 654 -^ 655 Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii var. fabryi: p. 162

656 Growth at 37"C 657 Propane 1,2 diol growth 658 Raffinose growth 659 DL-Lactate growth 660 D-Gluconate growth 661 10% NaCl/5%) glucose growth

^657 Candida fluviatilis: p. 505 Debaryomyces hansenii war. fabryi: p. 162 -^ 660 —> 661 Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii var. fabryi: p. 162

662 Gelatin liquefaction

...^

666

-^ 656 Debaryomyces occidentalis var. occidentalis: p. 165 -^ 659 -^ 658 Candida viswanathii: p. 570 -^ 662 Candida shehatae var. lignosa: p. 552 Candida tenuis: p. 561 ^

665

-^ 663

-^ 664

663 L-Rhamnose growth

—> 661

Candida shehatae var. insectosa: p. 552

664 L-Arabinose growth

Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii vax.fabryi: p. 162 —> 661

665 L-Rhamnose growth

Candida shehatae var. shehatae: p. 552 Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii vax.fabryi: p. 162

906

#

Key to species /R.W. Payne et al.

Test

666 A'^-Acetyl-D-glucosamine

Negative

Positive -^ 667

^

687

growth ^668

-> 675

668 a-Methyl-D-glucoside growth

-^ 669

-^673

669 L-Arabinose growth

-^ 670

-^ 672

667 Growth at 3 7 ^

670 Raffinose growth 671 D-Glucosamine growth 672 0.1% Cycloheximide growth

Debaryomyces hansenii yax.fabryi: p. 162

-^ 671

Debaryomyces etchellsii: p. 160

Clauispora lusitaniae: p. 148

Candida maltosa: p. 522

Clauispora lusitaniae: p. 148 Metschnikowia pulcherrima: p. 264

673 DL-Lactate growth 674 50% Glucose growth

-> 674

Metschnikowia agaues: p. 257

Clavispora lusitaniae: p. 148

Clauispora opuntiae: p. 150

675 10% NaCl/5% glucose growth

-^676

^

676 Hexadecane growth

-^ 677

-> 680

677 L-Sorbose growth

-» 678

684

-^ 679

678 Raffinose growth

Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii war. fabryi: p. 162

679 Raffinose growth

Debaryomyces hansenii var. hansenii: p. 161

Metschnikowia lunata: p. 263

Debaryomyces hansenii war.fabryi: ip. 162

Metschnikowia reukaufii: p. 265

680 a-Methyl-D-glucoside growth 681 Raffinose growth

-^ 681 Debaryomyces hansenii var. fabryi: p. 162 Candida sake: p. 547

683 Galactose fermentation

Candida sake: p. 547

685 Lactose growth 686 0.01% Cycloheximide growth 687 Raffinose growth 688 Ribitol growth

^

Debaryomyces hansenii var. hansenii: p. 161

682 Galactose fermentation 684 Melezitose growth

Candida sake: p. 547 Metschnikowia pulcherrima: p. 264 Metschnikowia reukaufii: p. 265

-^ 685

Metschnikowia bicuspidata var. californica: p. 259 Metschnikowia bicuspidata var. bicuspidata: p. 259 Pichia segobiensis: p. 340 ^

Candida tenuis: p. 561 Candida natalensis: p. 530 ^688 Debaryomyces hansenii var. hansenii: p. 161

690 Ribitol growth 691 L-Rhamnose growth 692 Lactose growth 693 Melezitose growth 694 Galactose fermentation

-^ 690 Metschnikowia zobellii: p. 266

Candida sake: p. 547 Zygosaccharomyces fermentati: p. 427

—» 693

696 L-Rhamnose growth 697 L-Sorbose growth

691

-^ 692 -^ 694 Kluyueromyces aestuarii: p. 229 ^

Kluyueromyces dobzhanskii: p. 233 Kluyueromyces lactis var. drosophilarum: p. 234

695 a-Methyl-D-glucoside growth

^

Candida buinensis: p. 491

Pichia strasburgensis: p. 343 Kluyueromyces lactis var. lactis: p. 233

686

Candida sake: p. 547

Debaryomyces hansenii war. fabryi: p. 162 689 D-Glucosamine growth

683

-^ 682

695

Metschnikowia agaues: p. 257

. . . . Metschnikowia bicuspidata var. chathamia: p. 259

^

698

—> 697

Candida haemulonii: p. 511

Debaryomyces uanrijiae var. yarrowii: p. 170

-^ 702

698 L-Arabinose growth

-^ 699

-> 701

699 Hexadecane growth

—» 700

Candida parapsilosis: p. 536

700 Galactitol growth 701 Galactose fermentation 702 Raffinose growth 703 0.01% Cycloheximide growth

Debaryomyces uanrijiae var. yarrowii: p. 170

-^ 705 -^ 706

708 Vitamin-free growth

^

-> 704

705 Melezitose growth

707 Melibiose growth

-^ 714

^703

704 10% NaCl/5% glucose growth

706 Ribitol growth

Candida mogii: p. 527

Kluyueromyces lactis var. drosophilarum: p. 234

Debaryomyces uanrijiae var. yarrowii: p. 170 Zygosaccharomyces florentinus: p. 428 -^709

708

-> 707 Zygosaccharomyces

cidri: p. 426

Zygosaccharomyces fermentati:

^All

. . Kluyueromyces lactis var. drosophilarum: p. 234 -^ 711

907

114. Key to species /R.W. Payne et al.

#

Test

709 Galactitol growth 710 Inulin growth

Positive

Negative

Debaryomyces vanrijiae var. yarrowii: p. 170 Torulaspora delbrueckii: p. 404

Saccharomyces bayanus: p. 360 Torulaspora delbrueckii: p. 404

-^ 712

712 Melibiose growth

Saccharomyces kluyueri: p. 365

713 10% NaCl/5% glucose growth

Torulaspora delbrueckii: p. 404

715 Growth at 3TC 716 A/^-Acetyl-D-glucosamine

-^ 715

^

Torulaspora delbrueckii: p. 404 Kluyueromyces thermotolerans: p. 240 ^

^716

718 D-Glucosamine growth

-^ 717

720 2-Keto-D-gluconate growth

Candida sake: p. 547 Torulaspora delbrueckii: p. 404

721 Citrate growth

-^ 722

722 D-Xylose growth

-» 723

723 DL-Lactate growth

-^ 124

724 A/^-Acetyl-D-glucosamine growth 725 Growth at 37''C 726 Raffinose growth 111 Ribitol growth 11% 10% NaCl/5%) glucose growth 729 Melezitose growth 730 2-Keto-D-gluconate growth

Kluyueromyces lactis var. drosophilarum: p. 234 ^

Candida quercitrusa: p. 543 Candida sake: p. 547

719 Cadaverine growth

Pichia toletana: p. 346 Pichia xylosa: p. 350 ^726 -^

720

-^ 718

Lodderomyces elongisporus: p. 254

Torulaspora delbrueckii: p. 404

713

Saccharomyces paradoxus: p. 366

growth 717 2-Keto-D-gluconate growth

710

Torulaspora pretoriensis: p. 406 711 DL-Lactate growth

714 Succinate growth

^

719

Torulaspora delbrueckii: p. 404 Zygosaccharomyces

rouxii: p. 431 -^ 741 -^ 739 -^ 736 -^ 725 -^ 733 ^

729

111

Pichia onychis: p. 330

-^ 11%

Candida odintsouae: p. 532

Pichia rabaulensis: p. 337

Pichia meyerae: p. 323

—> 730

-^ 731

Pichia wickerhamii: p. 349

-^ 12>1

731 L-Arabinose growth

Pichia bouis: p. 292

Candida freyschussii: p. 506

732 Gelatin liquefaction

Candida freyschussii: p. 506

Pichia rhodanensis: p. 338

Pichia japonica: p. 315 733 Ribitol growth 734 L-Rhamnose growth

^

734

Pichia hampshirensis: p. 309

Candida quercuum: p. 543

-^ 735

Candida maritima: p. 523

735 Pellicle formation

Pichia ueronae: p. 348

736 L-Sorbose growth

-^ 737

Candida suecica: p. 560

Candida musae: p. 528

Candida oregonensis: p. 534

737 Melezitose growth 738 L-Arabinose growth 739 Galactose fermentation

Pichia angophorae: p. 286 Debaryomyces occidentalis var. persoonii: p. 165

^

^

738

740

Candida tsuchiyae: p. 564

740 Cellobiose growth

Pichia spartinae: p. 341

^

745

741 Cellobiose growth

-^ 141

^

743

742 Ribitol growth 743 DL-Lactate growth 744 L-Rhamnose growth 745 Raffinose growth

746 Lactose growth 747 Galactose fermentation 748 0.01%) Cycloheximide growth 749 Ribitol growth 750 Galactitol growth 751 Cellobiose growth

Metschnikowia reukaufii: p. 265

Williopsis mucosa: p. 415

-^ 744

Candida solani: p. 555

Pichia xylosa: p. 350

^

720

Saccharomyces bayanus: p. 360 Torulaspora delbrueckii: p. 404

-> 747

Kluyueromyces aestuarii: p. 229

-^ 749

-^ 748

. . . Nadsonia fuluescens war. fuluescens: p. 169

Kluyueromyces lactis var. drosophilarum: p. 234

-^ 751

-^750

Pichia wickerhamii: p. 349

Debaryomyces vanrijiae var. yarrowii: p. 170

Candida floricola: p. 505

-^ 752

908

Key to species /R.W. Payne et al.

Test

Negative

Positive

752 L-Sorbose growth

Metschnikowia gruessii: p. 260

Pichia xylosa: p. 350

753 Galactitol growth

Candida spandouensis: p. 558

-> 754

754 Mehbiose growth

—>• 755

755 Trehalose growth

Zygosaccharomyces

microellipsoides: p. 430

756 A'^-Acetyl-D-glucosamine

-^ 756 Zygosaccharomyces

mrakii: p. 430

-^ 757

-^ 758

Wickerhamia fluorescens: p. 409

Candida apicola: p. 481

Candida gropengiesseri: p. 510

-> 759

growth 757 Galactose fermentation 758 Hexadecane growth 759 Succinate growth 760 10% NaCl/5% glucose growth 761 Cellobiose growth 762 Trehalose growth

^

Kluyueromyces aestuarii: p. 229

762

Torulaspora delbrueckii: p. 404

Candida bombicola: p. 490

—> 764

Kluyueromyces lactis var. drosophilarum: p. 234 Kluyueromyces marxianus: p. 236

Kluyueromyces lactis var, lactis: p. 233

Kluyueromyces lactis var, drosophilarum: p. 234

765 D-Xylose growth

-^ 766

766 Trehalose growth

Torulaspora delbrueckii: p. 404

767 Raffinose growth 768 0.01% Cycloheximide growth

765

-^ 763

^761

763 Melezitose growth 764 Lactose growth

^

-^ 760

^

767

Kluyueromyces waltii: p. 241

-^ 768

-^ 769

Torulaspora globosa: p. 406

Torulaspora delbrueckii: p. 404

769 Maltose fermentation

-^ 720

Torulaspora delbrueckii: p. 404 Zygosaccharomyces

bailii: p. 424

770 Trehalose growth

-^ 111

-^ 111

11\ L-Sorbose growth

Candida bombi: p. 489

Zygosaccharomyces rouxii: p. 431

772 Raffinose growth

^773

Candida geochares: p. 508

773 Galactose fermentation 774 Galactose growth

Zygosaccharomyces

mrakii: p. 430

Candida gropengiesseri: p. 510

775 Ribitol growth

-^ 776

776 Ethanol growth

-^ 777

777 Melibiose growth 778 Galactose fermentation

^

774

Candida apicola: p. 481 ^

779

Candida multigemmis: p. 528

Candida xestobii: p. 571

-^ 11%

Kluyueromyces lactis var. drosophilarum: p. 234

Pichia hampshirensis: p. 309

Kluyueromyces marxianus: p. 236 779 D-Xylose growth

-^780

^

782

Kluyueromyces wickerhamii: p. 242

-^ 781

781 Galactose fermentation

Kluyueromyces lactis var. drosophilarum: p. 234

Pichia meyerae: p. 323

782 D-Glucosamine growth

Dekkera anomala: p. 174

-> 783

780 Lactose growth

Dekkera bruxellensis: p. 175 783 Raffinose fermentation 784 Vitamin-free growth

-^ 784 Saccharomyces bayanus: p. 360

785 Maltose growth

-^ 786

786 Ethanol growth

-^ 787

787 Cadaverine growth

Kluyueromyces lactis var. drosophilarum: p. 234

788 Galactose fermentation

-^ 789

789 D-Gluconate growth

-^ 790

790 Citrate growth 791 Cadaverine growth

Kluyueromyces polysporus: p. 239 -^ 792

792 Growth at 37''C

Kluyueromyces lactis var. drosophilarum: p. 234

793 Ethanol growth

Saccharomycodes ludwigii: p. 372

794 Trehalose growth

Cyniclomyces guttulatus: p. 154

^

795

-^ 785 ^

788

Schizosaccharomyces pombe: p. 393 Saccharomyces cereuisiae: p. 361 Saccharomyces pastorianus: p. 367 -^ 793 ^

791

Saccharomyces barnettii: p. 359 Candida milleri: p. 526 Saccharomyces exiguus: p. 364 Kluyueromyces lodderae: p. 235 ^

794

Candida stellata: p. 559

909

114. Key to species /R.W. Payne et al.

Test

Positive

Negative

795 Succinate growth 796 Ethanol growth 797 D-Gluconate growth

. Kluyveromyces lactis var. drosophilarum. p. 234 Kluyveromyces

Saccharomyces

spencerorum p. 368

-^ 798

bacillisporus: p.230

798 Cadaverine growth 799 Maltose growth

-^ 797

796

^ 799 . Hanseniaspora osmophila: p. 216 .... Hanseniaspora uineae: p.219

Dekkera bruxellensis: p. 175 Hanseniaspora

occidentalis: p.215

800 Galactose growth

^801

- -> 819

801 Ribitol growth

^

802

- -^ 813

802 Pellicle formation

-^803

- -^ 805

803 D-Gluconate growth

-^ 804

Debaryomyces

carsonii: p. 158

Candida palmioleophila: p. 535

- -^ 642

805 Cellobiose growth

^806

- -> 812

806 10% NaCl/5% glucose growth

-^ 807

- -> 810

804 Growth at 40°C

-^ 809

807 Propane 1,2 diol growth 808 DL-Lactate growth 809 Vitamin-free growth

. Candida saitoana: p. 546

Lipomyces starkeyi: p. 252

Lipomyces starkeyi: p. 252

Debaryomyces hansenii var. hansenii: p. 161 Debaryomyces hansenii var. fabryi: p. 162

810 Melibiose growth

-> 811

Candida tenuis: p. 561

811 DL-Lactate growth

. Candida glaebosa: p. 509

Lipomyces starkeyi: p. 252

812 Melibiose growth

Lipomyces starkeyi: p. 252

Candida azyma: p. 485

813 DL-Lactate growth

•^ 814

815 Trehalose growth

-^ 815

Candida caseinolytica: p. 492 Candida antillancae: p. 481

816 Melibiose growth 817 Growth at 40°C 818 Maltose growth

Lipomyces kononenkoae ssp. spencer-martinsiae: p. 250 . . Lipomyces kononenkoae ssp. kononenkoae: p. 250 Lipomyces starkeyi: p. 252 Metschnikowia

820 L-Sorbose growth

•^821

825 Ribitol growth 826 L-Rhamnose growth 827 Glucose fermentation 828 Galactitol growth

Pichia xylosa: p. 350

Pichia canadensis: p. 295

Candida suecica: p. 560

-^ 835

^

832 D-Xylose growth

-^ 833

838 Cellobiose growth 839 Galactose fermentation

krissii: p. 262

-^ 828

--> 829

Pichia tannicola: p. 345

Williopsis saturnus var. sargentensis: p. 417

837 Citrate growth

Metschnikowia

-^ 839

830 Pellicle formation

836 D-Xylose growth

Candida drimydis: p. 500

-^ 827

831 Succinate growth

835 Ribitol growth

-^ 825

824 Lipomyces starkeyi: p. 252

-^ 830

834 Galactose fermentation

- -^ 822 Candida ancudensis: p. 480

829 Cellobiose growth

833 Citrate growth

- -^ 823

Candida petrohuensis: p. 539

823 0.01% Cycloheximide growth 824 Melibiose growth

Candida apis: p. 482

australis: p. 258 -^ 820

822 A/^-Acetyl-D-glucosamine growth

-^ 818

-> 817

819 DL-Lactate growth

821 Ribitol growth

- -^ 816

Candida tepae: p. 562

814 D-Mannitol growth

Pichia pastoris: p.331 --> 831 --> 834

832

Pichia minuta var. minuta: p. 324 Brettanomyces nanus: p. 452

Candida anatomiae: p. 479 Brettanomyces

naardenensis: p. 451

Pichia minuta var. minuta: p. 324

Candida maris: p. 523

-^ 836

Pichia salicaria: p. 338

-^ 837

—> 838 Candida montana: p. 527 Pichia opuntiae: p. 330

-^ 840

Pichia

thermotolerans: p. 346

Pichia antillensis: p. 288 Pichia opuntiae: p. 330

--^ 853

Key to species /R.W. Payne et al

910

#

Test

840 Citrate growth 841 Cellobiose growth

Positive

Negative -> 841

^

842

Candida savonica: p. 550

Candida catenulata: p. 494

842 0.01% Cycloheximide growth

-^843

-^ 846

843 Succinate growth

-^ 844

844 Cellobiose growth 845 Growth at 37*'C 846 Trehalose growth

Dekkera bruxellensis: p. 175

Saccharomyces seruazzii: p. 368

^847

-^ 850

Torulaspora delbrueckii: p. 404

848 DL-Lactate growth

Candida humilis: p. 513

850 D-Gluconate growth 851 Ethanol growth 852 2-Keto-D-gluconate growth

845

Saccharomyces unisporus: p. 370

847 D-Mannitol growth

849 Succinate growth

^

Brettanomyces naardenensis: p. 451

^

848

-^ 849

Saccharomyces castellii: p. 360

Saccharomyces castellii: p. 360

Saccharomyces dairenensis: p. 363

Saccharomyces transvaalensis: p. 369

Kluyueromyces phaffii: p. 239

-> 851

Kluyueromyces yarrowii: p. 243

-^ 852

Kluyueromyces blattae: p. 231

Kluyueromyces africanus: p. 230

Saccharomyces rosinii: p. 367

Saccharomyces rosinii: p. 367

853 D-Mannitol growth

-^ 854

-> 899

854 Maltose fermentation

-^ 855

-> 857

855 Citrate growth 856 2-Keto-D-gluconate growth

Candida catenulata: p. 494

-^ 856

Torulaspora delbrueckii: p. 404

Zygosaccharomyces

mellis: p. 429

857 Trehalose growth

-^858

Zygosaccharomyces

rouxii: p. 431

858 Melezitose growth

-^ 859

859 Cellobiose growth

-^ 878 ^

Candida insectamans: p. 515

860

860 Succinate growth

-^ 861

Torulaspora delbrueckii: p. 404

861 L-Sorbose growth

-^ 862

-^ 877

862 0.01% Cycloheximide growth

-> 863

863 Citrate growth

-^ 864

864 D-Gluconate growth 865 D-Xylose growth 866 Xylitol growth 867 Ethanol growth

-^ 865 Candida beechii: p. 485

-^868 Candida torresii: p. 562

869 D-Glucosamine growth

Candida fructus: p. 507

870 Cellobiose growth

-^ 871

871 Glucose fermentation

-^ 833

873 Citrate growth 874 Glucose fermentation 875 Gelatin liquefaction 876 2-Keto-D-gluconate growth 877 Cellobiose growth

-^ 873 Candida catenulata: p. 494

Saturnispora saitoi: p. 389

Pichia minuta var. minuta: p. 324

879 D-Glucosamine growth

-^ 880

881 Cellobiose growth

883 L-Sorbose growth 884 Glucose fermentation

-> 866 Candida zeylanoides: p. 571 Schizoblastosporion

starkeyi-henricii: p. 602 -^ 869

Torulaspora delbrueckii: p. 404 -^ 872 Candida insectalens: p. 514 Schizoblastosporion

starkeyi-henricii: p. 602 -^ 874 Candida siluatica: p. 554 -^ 876

Torulaspora delbrueckii: p. 404

-^879

882 Ribitol growth

Trigonopsis uariabilis: p. 605

-^ 875

878 Ethanol growth

880 Xylitol growth

-^ 867 Botryozyma nematodophila: p. 449

Candida santamariae: p. 549

868 Cellobiose growth

872 Ethanol growth

-^ 870

Candida uinaria: p. 568 -> 882 Candida sonorensis: p. 556 Pichia pijperi: p. 334 Pichia quercuum: p. 337

Saturnispora dispora: p. 388 Saturnispora zaruensis: p. 390 Torulaspora delbrueckii: p. 404 Zygosaccharomyces

bailii: p. 424 -^ 897 ^

881

Candida krissii: p. 517 -^ 885 ^

883

-^ 884 Pichia thermotolerans: p. 346

911

114. Key to species /R.W. Payne et al.

Test

Negative

Positive -^ 886

-> 887

Candida rugosa: p. 546

Pichia delftensis: p. 299

887 Glucose fermentation

-^ 888

-^ 894

888 L-Sorbose growth

-^889

^

889 DL-Lactate growth

Candida cylindmcea: p. 497

885 A^-Acetyl-D-glucosamine growth 886 Galactose growth

890 Citrate growth

Zygosaccharomyces

bisporus: p. 426 ^

Candida diuersa: p. 499

890

891

Candida siluae: p. 553 891 D-Gluconate growth

-> 893

^892

892 Ribitol growth

Candida siluae: p. 553

893 Ribitol growth

Candida siluae: p. 553 Candida uini: p. 569

Pichia caribaea: p. 297 Candida uini: p. 569 Pichia besseyi: p. 290 Saturnispora ahearnii: p. 387

894 Galactose growth 895 DL-Lactate growth 896 D-Gluconate growth 897 Glucose fermentation 898 Citrate growth 899 Cellobiose growth

-^ 895

-^ 896

Candida pararugosa: p. 538

Candida sorbophila: p. 557

Pichia amethionina var. pachycereana: p. 284

Pichia fluxuum: p. 306

Candida karawaiewii: p. 517 Candida galacta: p. 507

-> 898 Schizoblastosporion

starkeyi-henricii: p. 602

^900

^

911

900 Glucose fermentation

-> 901

-^ 908

901 Succinate growth

-^ 902

^

902 Trehalose growth

Brettanomyces naardenensis: p. 451

-^ 903

Pichia noruegensis: p. 328

Candida dendrica: p. 497

-> 905

-^ 906

Hanseniaspora guilliermondii: p. 215

Dekkera bruxellensis: p. 175

903 D-Glucosamine growth 904 Growth at 3 7 ^ 905 Cadaverine growth 906 Maltose growth 907 2-Keto-D-gluconate growth

Hanseniaspora osmophila: p. 216 Hanseniaspora uineae: p. 219 Hanseniaspora uuarum: p. 217

^

904

907

Hanseniaspora ualbyensis: p. 218 Kloeckera lindneri: p. 581

908 D-Xylose growth

Babjeuia anomala: p. 141

909 Galactose growth

^910

-^ 269

Prototheca stagnora: p. 885

Pichia chambardii: p. 298

910 Maltose growth

-^ 909

911 Maltose growth

-^ 912

-^ 918

912 Glucose fermentation

-^ 913

-^ 914

913 0.01% Cycloheximide growth 914 Hexadecane growth

Dekkera bruxellensis: p. 175

. . . Schizosaccharomyces

octosporus: p. 392

Prototheca zopfii var. hydrocarbonea: p. 886

-^ 915

915 Succinate growth

-^ 916

Prototheca moriformis: p. 884 Prototheca zopfii var. zopfii: p. 886

916 Galactose growth

Prototheca stagnora: p. 885

-> 917

Prototheca moriformis: p. 884

Nadsonia commutata: p. 268

. Prototheca zopfii var. portoricensis: p. 886 917 Growth at 25°C 918 Galactose growth 919 Growth at 25«C 920 Vitamin-free growth 921 Ethanol growth 922 Trehalose growth 923 Glucose fermentation 924 Xylitol growth 925 Glucose fermentation 926 D-Glucosamine growth

^919

-^ 926

-> 920

Candida austromarina: p. 484

Dipodascus ingens: p. 188

-^ 921

^922

-^925

-^ 923 Dekkera bruxellensis: p. 175 Candida uinaria: p. 568 Dekkera bruxellensis: p. 175 —> 927

^

924

Candida caseinolytica: p. 492 Prototheca wickerhamii: p. 886 Dekkera bruxellensis: p. 175 Schizoblastosporion

starkeyi-henricii: p. 602 -^ 941

912

#

Key to species /R.W. Payne et al.

Test

Negative

Positive

927 Pellicle formation

-^928

-^ 939

928 Vitamin-free growth

-^ 929

-^ 931

Issatchenkia orientalis: p. 222 Pichia membranifaciens: p. 319

-^ 930

Issatchenkia occidentalis: p. 221 Pichia membranifaciens: p. 319

Candida rugopelliculosa: p. 545 Pichia membranifaciens: p. 319

929 Citrate growth 930 Glycerol growth 931 A^^-Acetyl-D-glucosamine

-^ 932

^

937

growth ^933

-^ 936

933 Glucose fermentation

—> 934

. . . , Pichia kluyueri var. eremophila: p. 316 Pichia membranifaciens: p. 319 Prototheca ulmea: p. 885

934 Citrate growth

-^ 935

Pichia barkeri: p. 289 Pichia kluyueri var. kluyueri: p. 315 Pichia membranifaciens: p. 319

932 Succinate growth

935 D-Xylose growth

936 Glucose fermentation 937 D-Xylose growth

Pichia fermentans: p. 305 Pichia kluyueri var. kluyueri: p. 315 Pichia membranifaciens: p. 319

Pichia kluyueri var. kluyueri: Pichia kluyueri var. cephalocereana: . . . . Pichia kluyueri var. eremophila: Pichia membranifaciens:

p. 315 p. 316 p. 316 p. 319

Dekkera bruxellensis: p. 175

Pichia membranifaciens: p. 319

Pichia membranifaciens: p. 319

Prototheca ulmea: p. 885

Pichia cactophila: p. 294

-^ 938

938 Glucose fermentation

Dekkera bruxellensis: p. 175

Pichia pseudocactophila: p. 336 Prototheca ulmea: p. 885

939 Glucose fermentation

—> 940

Candida inconspicua: p. 514 Prototheca ulmea: p. 885

940 D-Xylose growth

Candida pseudolambica: p. 542

Dekkera bruxellensis: p. 175

941 L-Sorbose growth

-> 942

-^ 946

942 Ethanol growth

-^ 943

Prototheca ulmea: p. 885 Schizoblastosporion starkeyi-henricii: p. 602

943 A/^-Acetyl-D-glucosamine growth 944 D-Xylose growth 945 Glucose fermentation 946 Vitamin-free growth 947 Growth at 37''C

948 A'^-Acetyl-D-glucosamine

Pichia membranifaciens: p. 319

^

944

^

945

Prototheca ulmea: p. 885 Candida sorboxylosa: p. 558 Nadsonia fuluescens var. elongata: p. 269

Prototheca ulmea: p. 885

-^ 947

-^ 950

Candida ethanolica: p. 503 Pichia galeiformis: p. 307 Pichia membranifaciens: p. 319

^

948

-^ 949

Issatchenkia scutulata var. scutulata: p. 224

growth Pichia membranifaciens: p. 319

. . Issatchenkia scutulata var. exigua: p. 224

950 Glucose fermentation

-^ 951

-^ 961

951 Glycerol growth

-^ 952

^

952 Succinate growth

-^ 953

-> 955

953 Trehalose growth

Brettanomyces custersianus: p. 451

-^ 954

Pichia membranifaciens: p. 319

Issatchenkia terricola: p. 225

949 10% NaCl/5% glucose growth

954 A/^-Acetyl-D-glucosamine

Pichia nakasei: p. 326

growth 955 D-Gluconate growth 956 Cadaverine growth 957 Ethanol growth

-^ 956

-^ 957

Candida glabrata: p. 508

Candida castellii: p. 493

Dekkera bruxellensis: p. 175 Pichia membranifaciens: p. 319

958 D-Gluconate growth 959 A'^-Acetyl-D-glucosamine growth

958

Kluyveromyces delphensis: p. 232 Dekkera bruxellensis: p. 175 Pichia membranifaciens: p. 319

^

913

^

959

^

960

913

114. Key to species /R.W. Payne et al.

#

Test

960 Growth at 3>TC

Positive

Negative

Arxiozyma telluris'. p. 134

. . . Schizosaccharomyces

octosporus: p. 392

Dekkera bruxellensis: p. 175 961 Growth at 25''C 962 Ethanol growth 963 D-Gluconate growth 964 D-Xylose growth 965 A/^-Acetyl-D-glucosamine growth 966 A^-Acetyl-D-glucosamine growth

^962 -> 963 , Pichia amethionina var. amethionina: p. 284 Prototheca ulmea: p. 885 -^ 965

Nadsonia commutata: p. 268 Schizoblastosporion

Prototheca ulmea: p. 885 starkeyi-henricii: p. 602 ^

964

^

966

Pichia membranifaciens: p. 319

Pichia heedii: p. 310

Pichia membranifaciens: p. 319 Prototheca ulmea: p. 885

Pichia deserticola: p. 300 Prototheca ulmea: p. 885

This Page Intentionally Left Blank

Summary of species characteristics Contents Introductory remarks Aciculoconidium Agaricostilbum Ambrosiozyma Arxiozyma Arxula Ascoidea Aureobasidium Babjevia Bensingtonia Blastobotrys Botryozyma Brettanomyces Bullera Bulleromyces Candida Cephaloascus Chionosphaera Citeromyces Clavispora Cryptococcus Cyniclomyces Cystofilobasidium Debaryomyces Dekkera Dipodascopsis Dipodascus Eremothecium Erythrobasidium Fellomyces Fibulobasidium Filobasidiella

915 916 916 916 916 916 916 916 916 916 916 916 916 916 918 918 924 924 924 924 924 926 926 926 926 926 926 928 928 928 928 928

928 928 928 928 928 928 928 930 930 930 930 930 930 930 930 930 932 932 932 932 932 932 932 936 936 936 938 938 938 940 940 940

Filobasidium Galactomyces Geotrichum Hanseniaspora Holtermannia Hyalodendron Issatchenkia Itersonilia Kloeckem Kluyueromyces Kockovaella Kurtzmanomyces Leucosporidium Lipomyces Lodderomyces Metschnikowia Moniliella Mrakia Myxozyma Nadsonia Oosporidium Pachysolen Pichia Protomyces Prototheca Pseudozyma Reniforma Rhodosporidium Rhodotorula Saccharomyces Saccharomycodes Saccharomycopsis

Saitoella Saturnispora Schizoblastosporion Schizosaccharomyces Sirobasidium Sporidiobolus Sporobolomyces Sporopachydermia Stephanoascus Sterigmatomyces Sterigmatosporidium Sympodiomyces Sympodiomycopsis Tilletiaria Tilletiopsis Torulaspora Tremella Trichosporon Trichosporonoides Trigonopsis Trimorphomyces Tsuchiyaea Ustilago Wickerhamia Wickerhamiella Williopsis Xanthophyllomyces Yarrowia Zygoascus Zygosaccharomyces Zygozyma

940 940 940 940 940 940 942 942 942 942 942 942 942 942 942 942 942 944 944 944 944 944 944 944 944 944 946 946 946 946 946

Introductory remarks Taxa are given in alphabetical order regardless of their phylogenetic relationships. The species listed are those that readily grow in standard media used for fermentation and assimilation tests. Consequently, Coccidiascus, Endomyces, Endomycete-like species and Malassezia are excluded. Data for Lalaria species are limited and members of this genus are omitted from the summary. Fellomyces horouitziae is characterized in the treatment of the genus Fellomyces, but the data were received too late for inclusion here. Assimilation reactions for Aureobasidium pullulans are given here but not elsewhere in the book. When sexual states are known for common anamorphic species, the taxon is listed in the summary under the teleomorphic name. For example, Candida lipolytica is given under Yarrowia lipolytica and Phaffia rhodozyma is given as Xanthophyllomyces dendrorhous. Known anamorph-teleomorph connections can be made by consulting the indexes.

915

916

Summary of species

Assimilation reactions and other characteristics

Fermentation

«

Species

O


^

(D

o

characteristics

O

ililill

u

o

y

rt

O O

o

(u
o

h — -2 -fi

J c^ S U

o H

o 2 ^

2

o -ti

o

o £ c g .S 1 ->, ^ 13 *« 13 3 - I X ^ S c2 S 5 c^ Q

O O t^ S J fti E^

Konidium aculeatum 1. istilbum Aga 2. A. hyphaenes

O

^ .-H ^

S QI 03

__

S o ">> 2

2 2 rS ^ -3 j;> ^

<: < cii 2 a 1^ u J

Q Q -J Q ^

S

:S 2;> B ^ '^ ? 9 w O w ai O Q Q

y4cic

3. A. ambrosiae 4. A. cicatricosa 5. A. monospora 6. A. philentoma 7. A. platypodis v4rjciozji«a 8. A. telluris Arxula 9. A. adeninivorans 10. A. terrestris Ascoidea 11. A. africana 12. A. corymbosa 13. A. hylecoeti 14. A. rubescens Aureobasidium 15. A. pullulans Babjevia 16. B. anomala Bensingtonia 17. B. ciliata 18. B. ingoldii 19. B. intermedia 20. B. miscanthi 21. B. naganoensis 22. B. phyllada 23. B. subrosea 24. B. yamatoana 25. B. yuccicola Blastobotrys 26. B. arbuscula 27. B aristata 28. B. capitulata 29. B. elegans 30. B. nivea 31. B. proliferans Botryozyma 32. B nematodophila Brettanomyces 33. B. custersianus 34. B. naardenensis 35. B. nanus Bullera I 36. B. armeniaca 37. B. crocea 38. B. dendrophila 39. B. globispora 40. B. megalospora

+

+ + + + +

+ - V + H

V

+ -

V

+

V

V

+ + + +

-

-

+ + + + +

+ + + + +

+ + + + +

+ + + + +

+ -

-

-

-

+ + + + +

X

- V - - - V

+ + + + +

- + + - -

- - - V

n n n V + + + n + + + n V V

-

V

+ + + +

+ -

+ w

+ w + -

- - w + + + + w - - + + + + + +

+ V V -

+ + - +

+

+ V - +

+

+ + -

V

V

+ + - +

+ + + + +

-

+ + + + +

+ + + + +

- + + + - + + - + + + - +

+ + + + - - + -

-

-

+ + + + - + + + + + + + + +

+ + + +

+ + + + + n + + + + - n

+ + + +

+ + + +

w n w w n w + n w + - + + + - n -

+ + + +

V + + + + + +

+ X + + X n n

+ + + + V + +

-

+ + V + + w +

w + w w w

+ V

- - - - + - - +

+ - + + - + - w w + +

n n n n

+ w +

+ + + w

V H

+ - w + + H + + + V + V V + +

+ + + + + +

+ + + + +

V

+ + + + + + + + + + + + + + + + + +

+ + + + +

+ + + +

+ + + + +

+ + + + +

+ + + - + + + + + + + + + +

+ + + + - + + -

-

_

V -

-

+ - +

V

+

w + - + + - + + +

w

+ - V +

V + + + V V -

V + +

V -

V + +

+ + + V +

+ V +

+ + + + +

n w - n n n n

-

V + -

n n n n n

+ + + V +

n n n n n

+ + + + + + +

+ + + + + + + +

+ -

+ + + + + + + w

-

+ + + + + + + +

+ + + + + + + +

+ + +

+ + + +

+ + + +

+ + + +

+ + V +

+ + + +

+ + + +

+

V V +

+

+ + + V V + + + + V - + + + + + + V + + +

+ +

V + +

+ + + + - + V

+ + + + + + +

+ + + V V V +

+ + V V + n n

+ + + + + + +

+

V V

+ + V + +

— - - - - - - - V + V - - - - - V

- - + - - V - V V - - - + -

+ +

+ V

+ +

+ + + + +

- - - - - V + - - - +

+ + + + w w

+ + + + +

+ + + + +

+ + + + +

+ + V

+ + + + +

V -

+ + - + + + + - - + + __ + +

- - w - + - V _+

+ + + + +

+ + + + +

+ + + +

+ + + +

V 4-

n n n

+ + n + - n + - n + - n __n

+

V -

+

+ - ++

V +

- + - + + + + - V - + + + +

+ + - + + + +

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

Summary of species

917

characteristics

Assimilation reactions and other characteristics

^

o o

^

9 "S w -k S ^ -2^ •S e a «;> c (u o

S cS *?" ^ B S i Q Q i ^ B '^ -S 2 S 1

C5 Ol D Q C/3 b

ffi ";;2 j? i> cs «A c ^

£

X! i3 is ^ ;^ ^

o

•s IS § I

. S « 0^ ^ • § - S -^s ^ . S c 5? CI 2 "^ -S S C ^ -43 X

J < PH CQ U O

,^ D ^ O^ J w P ^ 2o 55

+ + -

Agaricostilbum 2. + + + Ambrosiozytna 3. + + -- V 4. + V -- + 5. + + -- + 6. + + -- + 7. + + -- V Arxiozyma -

n

+ +

n n n n n

-

+ + + V -

+ + + +

V V

-

-

Arxula 9. + + + - + + + 10. + + + + + + + Ascoidea 11. - + - - + + 19 IZ.

-\^ WT -|- W

13. - + - - w - w 14. w w Aureobasidium 15.

V V +

Babjevia 16. - V Bensingtonia 17. 18. - - + 19. - - + 20. 21. - - + 22. + + w 23. - + 24. - - + 25. - + + Blastobotrys 26. V - n 27. V + n 28. - + n 29. - V n 30. V + n

+ + - n

+ + -

V X X

+

n n + +

------

n n n n n

n n n n n

n n n n n

+ + + + +

- n -

-

n n n n n n n

n n n

n v

n n n V + + n

+ + + + + + + + + + + + + -

+

n n n n n

n n n n

n n n n

o

n n n n n

------

n n n n n

n n n n n

+ + w + H—

+ + + +

40.9

+ + + + +

+ + + + +

+ + + + +

V + + n + + n n n

+ +

n + - w n n n n n n n

+ + + + n + + n

7 n 7 7 7

n n n n

w -

n n n n n n n

n n n - V n n

9

43.8

+ - - + + + + + + - + + + - + + + - + + -

n n n n

n n n n

+ +

V - -

+ + + + - + +

n n n n n

n n n n n

n n n n n

n n n n n

V

+ + + + -

n n n n n

n - n

-

n n n

n n n n n n n

n - n

-

n n n

n n n n n n n

n n n n n

n n n -

- - - - - V- - - n

n n n

- V - -

n n n n n

+ +

- + + -

n n n n n

+ + + +

+ + + + + + V

V

-

+

+ + + + +

n n n n n

n n n n n

n n n n n

n n n n n

V

n n n n n

-

+ +

+ -

V

+ V

+

n - + n

+ + - n - + - n n + + - n + n - - - n + + - n + n -

+ + + + + + + +

n n n n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

+ + V - + + +

+ + + + +

+ + + +

+ + + +

+ + + + +

+ + + + +

n n n n n

n n n n n

45.0 55.7 58.9 47.4 55.8 50.4 46.5 53.7 45.9 n - n + + n n + + n

n n n n n n n

n n + + + + n

n n n n - n n

+ + + + + + n

V V - n + + - n V n

n n n

+ + + + + + + + + + + - + +

n n n n n

+ V V + V - + + +

+ n + n + + - n + n n

+ + + + V

+ + + + +

+ n + + V + n +

-

n n n n

-

n n n n n

+ + + + +

- + + +

53.9

n n + n - n - n

- n

n n

10(H2)

- - +

Q OH H

9 9

n n n + n n +

- -

m 13 2

33.2

n n n n n n n

n

^

34.7 40.2 38.9 35.1 37.8

n + n + + + X

n n n n n

+ + + -

n n n n n

+ + + +

-

+ + + +

n n n n n

n + + n n n V + n n n + + n n n w w n n

n n n n n

—

n n n n n

n n n n

+ +

+ +

n n n n n

n n n n

n n n n

+ + +

n n n n n

-

+ -

- + - + - V V - + + -

31. + + n V + Botryozynta 32. + + Brettanomyces 33. + + 34. - V - V + 35. - + - Bullera 36. - w + + + 37. + + + + + 38. + + + + + 39. - V + + + 40. - + V - +

n n n n n

n n + n n n n n n + n n n n

+ - - - - - + + - -

+ V -

n n n n n

n n n n n n n n n n n n n n

+ + + - + + + +

+ V +

n n n n n

n n n n n n

n n n n n

+ V V

n n n n n

-

n

+

n n n n n

^

+ + + + n

n n + n - + n

J3

r^

mil

n n n n n n n

+ + + + + + + + —

V -

^5;

u

cij cd c3 rt rt ^ ^ J3 ^ ^

+ n n

w + w +

n

n + n n + n n n n n

^ O

o 2^ g o b g b d o O O a O O

ciculoconidium

1. + v

^

n n n n

+ + + +

- n +

+ - V + + + + + - + + + - + + -

n n n n n

+ + + + +

- n + 29.6 9 9 9

39.1 42.7 40.8

-

V

-

10 10 10 10 10

55.5 54.4 38.5 51.2 49.8

+ + + + +

+ + + + -

+ +

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

918

Summary of species characteristics

Fermentation

Assimilation reactions and other characteristics

.S 60 S^ o «J «^ « o o

S ^ 2 2 o C I Species Bullera 41. B. 42. B. 43. B. 44. B. 45. B.

O O c^ S J C^ E^

{cont'd) miyagiana oryzae pyricola pseudoalba punicea

46. B. sinensis 47. B. variabilis Bulleromyces 48. B. albus Candida 49. C. aaseri 50. C. albicans 51. C. amapae 52. C. anatomiae 53. C. ancudensis

o o ti o o ' O ^ O ^ *i — ^

^ 2 o -"t;

o -S ^ 13 3 -I X

a o J c^ S u f^

+ + - + + + + + + + + + + + + - V+ + + + + + + + + + + + + V+ + + +

+ + + +

+ + + +

+ + + + + - + + V + +

+ + + + + + +

-

w + + + + V +

+ + + + + +

+ + + + + + + + V V H

V

+ + V V H

+ + + + +

+

+

+

V -

- +

+

+ + - + + + + + + + + + + _ + +

+ + V

< < 5 2 9 1^ "S HJ

Q Q J Q !^ S

W O W D^ a Q Q

w + + + + + +

+ + + + + + +

+ - + + + + + + -

+ + + + + + +

+ + + + V + +

+ + + +

n n n n n n n

-

antillancae apicola apis atlantica atmosphaerica

59. 60. 61. 62. 63.

C. C. C. C. C.

auringiensis austromarina azyma beechii bertae

64. 65. 66. 67. 68.

C. C. C. C. C.

berthetii blankii boidinii boleticola bombi

69. 70. 71. 72. 73.

C. C. C. C. C.

bombicola buinensis butyri cantarellii caseinolytica

74. 75. 76. 77. 78.

C. C. C. C. C.

castellii castrensis catenulata chilensis chiropterorum

79. 80. 81. 82. 83.

C. C. C. C. C.

coipomoensis conglobata cylindracea dendrica dendronema

+ + + + +

+ +

+ + + + + + + + + + + + + + +

+ + V V

+

+ + + + + + +

84. 85. 86. 87. 88.

C. C. C. C. C.

diddensiae diuersa drimydis edax entomophila

+ + V V

+

+ + V+ + + +

+

+ +

V -

V + V V V

+ + —

+

+ - +

+

+ + + + + + + + + + + + + + + + +

+ +

+ + +

+ X + +

+ + +

+ + + +

+ + + +

V + - + V + + + + + + + + + -

V V V + + +

V + V V V + +

+ - +

+ -

V V V - V H

+

C. C. C. C. C.

+ - +

+ + +

3 Is

•i I 2^ I i B 2

+ V+ + + V+

54. 55. 56. 57. 58.

89. C. ergastensis


v n - n + + + -

+ + + + - + + + V V - + +

:

+ + +

- + + +

__- - - V- - -

+ +

+ + + + + n + + + - + + -

+ + + + + + + + + - + + + + + - +

+

+ + v - +

n -

+ + + + + + +

+ + +

vv + - + n + + + + + + -

+ + - + + + + + + - + - + + + + + + - + +

V

+ + V +

+ + + + +

V +

V

V V + V

+ + - +

+ + +

+ - + + + - V + V +

+ + + + + -+ + - + + + + + + + V + V

+ + + + +

+ + + + + + + H V + + V V+ + - + + +

+ - V + - + + h + +

+ + + + + + + + + + + + + + + + + + + V + + + VV

V

+V + + V + VVVVV + + - V V - V + -

+ +

V v + v - + n+ + + - V + -

+

V

+ - V

h

V

+

+

-

+ + + + + + + + +

+ - - - V + + + V + + + + - + + + + - + + - - - + + - + - + + + + + V +

V +

+ + +

- + + -

+ V

- + + - + +

V + V V -

+ + + +

V

+

+ + + + +

+ + + + + V + + + + + + + +

+ + +

+ + + +

+ —

+ — +

+ vv + + + + - + + V

- +

+ -

v - v + + + - V + + + + + + + -

+ + - + - + + + + + + - + + - + + + + + + + + + + +

+ + + - + + + + + - + + + - - - + + + + + + + + +

+ +

- + + - + n+ + + - V + -

+ +

+ + + + - + -

+

+ + + - + n -

+ - + + + + + + + + + + + + + + + + + + +

+ + + + + -V+ + + + + +

+ + + + v n + + + - + + -

+ + + + + V - V + + - + + + + + + + + + + -

+ + + + + + +

+

+ + v - + n -

+ + + + - + +

+

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

+ + + + +

+ + + + +

919

Summary of species characteristics

Assimilation reactions and other characteristics

11 U

3 S3

o

ao d

u

>> ; o B ^ ^ ^ 'S ^ ^ 'S ^ -S a

2

ts

00 Q Q 00 U ^S

Bullera {cont'd) 41. + + + + + 42. + + + + + 43. - + V - + 44. + + + + + 45. - + + - + 46. + + + + + 47. + + + + + Bull my 48. + + + + + Candida 49. + + + - + 50. V - V + + 51. - n n + V 52. - + + - + 53. + + - + + 54. - + - + V 55. - - V - V 56. - - + - 57. + + + - + 58. + + + - + 59. - + + - + 60. V + 61. + - V - + 62. - + + - + 63. + + + V + 64. - + - + + 65. + + + V + 66. - - - + + 67. - + V - + 68. - - + - + 69. - - + - + 70. + + + - + 71. V + V - + 72. - - V V + 73. - - V + + 74. - - + - 75. + - + + + 76. - - V + + 77. + + - + + 78. + + + + 79. + + - - + 80. - + + - + 81. - - + + + 82. - + + + + 83. + + + - + 84. + + + - + 85. - - - - + 86. + + - - + 87. + + + - V 88. + + V - + 89. + + - - +

+ + + +

+ + + +

C

^

S ^ Q Q 2 -§ u u I o o ^

i 1 1 .^ tS ^ I X- 1J <'^ aPQi U i U"I

+ + + + + +

n -

V V

+ + V

-

V

-

+ V

-

+ + + -

+

+ + + +

+ +

+ n n +

V

-

+ + V

-

+ + -

n + n + n + V

- - - - + + + + + + - - + V + - - -

n - + - -

+ + -

+ + + + + +

-

+ n -

V

+

- +

-

- + + n + -

+ -

n n n n n n n

- - +n n

n - - V + n - - + - n - + - + n n - n - - V n

+ + + + +

+ + -

+ - + n + - + n + - + n - - +n + - + n - - +n - - +n

n - - - V + - - - V n - - - +

-

+ + -

P:

ffi Z Z >
n n n n n n n

V

+ + + V

+ V

+

— —

+ + - + - + -

1

60 bO
V

n n n

-

n

- n n n n n n n n n n

n

n n n

-

n n - n + n n n n - n n n n n + n - n n n n n n n n -

- - + n - n - - +n - n n n n n - n n + + + n - - V n n -

+ + + V + + + + V + + + V

+ V + - + - + V + - -

w+ + -

+ + V V

+ + -

—

+ + + -

-

+ + + + V n n n - - + - - + - - +

- + -

-

V V

n + + +

n + + +

+ + + - + + + - + + + - V V

- -

+ + + - + + + + - - + + + + + + + - +

-

V

- -

V

- -

+ + + + + + + + +

-

n -

- + - + -

V V

+ -

V

-

+ + + + + + + + +

-

+ + + - + + + - + n n n n n + -

- - V -

V

-

-

V

+ + + - - + + - + + + + - - - - + + + + + + +

+ -

- + + + - + - + - + + + + +

-

- + - + - + -

- - - ++++ -

+ + + + + + + + + + + + + - + - - + -

11 J

W >n ^ 00

- - + + + - + + - - + + + - +

V

+ + + +

- + + + + + + + +

+ + + + + + + +

+ + + + + + + + + + + + + + + + + +

+ + + + + + + + + + + + +

+ +

-

+ + + + + + + +

n n n n n n n

Da

+ + n + + n - +n - +n + + n + + n + + n

- nV V - n - n - +- - + n + + - n + + + n -

-

-

-

+ n + n

- - n V

+

- V V

-

V

+ n

+ + + + + + + + + + + + +

1

- n ++n

+ + + + - n V + V + - n + +

+

:3

- -

- -

+ +

- -

+ n

- - n

+ + + + - n

- - V

+

- -

o

^

o

•><

U U U U

U X X J3 ^ o

43

o O O O O O

+ + + + + + +

+ n + n + + n

+ n - +

+

V

V

- ++

V

n n n n n n n n n n n n n n n n n n n n n n n n

- - ++++ -

-

+ + + + + -

n n n n n n n n n n n n n n n n

+ + + + + + + +

+

-

+ +

-

+ + + + +

-

+ +

-

+ + + +

§2^

2 2 2 2 2

- V + V + -

-

u+

% % % % %a

w

+ n + + +

:2^

^ a\ m Tt t^ o ^H c-4 en en "^t

+ + + n + + - ++ + + + + + + - ++ - ++ - ++ - ++ + + + n + + + + + + + + + + + + + + + + + + + + + - ++ - ++ - ++ - ++ + + + + + + - ++ + +w + + + + + + + + + + + + - ++ + + + + + + - ++ - ++ - ++ + + + + + + + + + + + +

+ + +

V -

-

w - -

+ + V

+ + + + + + V V

-

V

+ + V

+ + V -

—

+ + + + V

V -

-

+

+

V

+

V

-

+ + + +

+

V

10 10 10 10 10 10 10

60.1 61.2 51.5 53.1 54.2 55.1 56.4

10

54.4 + + V

9 9 n 9 n n 9 9 n 9 n n n n n n n 7 n 9 9 n n 9 n n n 9 n n n n n n n 9 7 n n n n

37.1 35.0 38.8 39.0 42.0 39.0 46.3 47.2 35.8 39.0 40.1 39.0 54.4 40.9 43.9 39.8 55.2 32.4 43.9 47.5 49.8 31.5 34.7 41.9 46.9 43.3 41.7 53.8 44.0 48.0 32.0 40.1 62.7 42.0 38.5 37.7 35.1 43.4 46.8 56.3 36.5

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

+ + + + + +

- + - + + -

+

+

-

- + + -

V

V

-

+ +

- + + - + V -

+

V

- + -

+ - + + — +

- + -

- + -

- + + — + V

920

Summary of species

characteristics

Assimilation reactions and other characteristics

Fermentation

.S &o ^ 2 o o

^ o

^ ^ o o o o ,S =«

g ^ I ^ ^ § -g

Species

a

Candida (cont'd) 90. C. ernobii 91. C. etchellsii 92. C. ethanolica 93. C. fennica 94. C. fermenticarens

O c^ S J

o ^

13

o

a> u .2

o

« o o •§ "3

O oo

oi fi::

VH

;ti ^

J-

c^ S U H

^ ^ § 2

^S

o -ti

o .S -S ^ S S ^

III

o


o £ c s .s :§ ->.

JP 2 ^ -ss -3 , -S p 2C

< < 5 2 9 < tS

^ X i 00 Q

W O W Cei O

Q O

+ + - + - + + V V + +

+

+

+

V V

+

+

+

V

+

V V V V

h

+

V -

95. 96. 97. 98. 99.

C. C. C. C. C.

floricola fluuiatilis freyschussii friedrichii fructus

100. 101. 102. 103. 104.

C. C. C. C. C.

galacta geochares glabrata glaebosa glucosophila

105. 106. 107. 108. 109.

C. C. C. C. C.

gropengiesseri haemulonii homilentoma humilis incommunis

110. 111. 112. 113. 114.

C. C. C. C. C.

inconspicua insectalens insectamans insectorum intermedia

115. 116. 117. 118. 119.

C. C. C. C. C.

ishiwadae karawaiewii krissii kruisii lactis-condensi

120. 121. 122. 123. 124.

C. C. C. C. C.

laureliae llanquihuensis lyxosophila magnoliae maltosa

125. 126. 127. 128. 129.

C. C. C. C. C.

maris maritima melibiosica membranifaciens mesenterica

130. 131. 132. 133. 134.

C. C. C. C. C.

methanosorbosa milleri mogii montana multigemmis

135. 136. 137. 138. 139.

C. C. C. C. C.

musae naeodendra nanaspora natalensis nemodendra

+

-

+

+

+

-

+

-

V

+

-

+

V

+

V +

+

+

+ + + +

- + - + + - + +

+

-

+ — + + + + + + + + + +

n + + +

+ + + +

V

+

+ + + + - + + + + + - + -

+ + + + + + - + V + + + - + + + + +

+ - + +

+ + + + +

V

+

+

+

V

+

+

+

+

V — V V

+ + + — - + + + + + + + + + + + + + + + + +

+

V V

+

+

+ + + - +

- + + -

V

+

V +

+

+ + + + + + +

+

-

V

-

+ + —

+

+

V V -

+

V +

V

V -

V V +

+

+ + + + + +

-

+

V

+ + + + + + — +

+

V

-

- + - + - +

+ + + + V + + + + + + + + - + + +

V V

+ + + +

+ + + +

+ + + + +

+ + - - V + + + - + + - + + - +

+ + + + +

+ + + +

+

V +

-

V +

-

n -

+

+ + + + + + - - V +

+ + + + + + + + + + + + + - + - + + - +

+ +

V +

+ + +

+ -

+

+

-

V V

+ - + +

V V +

+

+

+

-

+

V V

+

V + + + + + - + V + +

-

V V

V V V +

+ - + + +

- V

+ - + +

n n n

+ + - + - + + n w

V +

W

+

-

— n -

+ + +

+ + + + -

_l_ _l_

+

+ + + + V + -

+

V V V V V n —

+

+ - + + -

V

+ -

V +

+ -

+ - + + -

V

V

+ + + — +

+

+

+

-

-

V -

+

+ V

+

-

V

V +

-

+ - n + V V -

+

V +

V V +

-

V V +

-

+

+

-

V V -

V n

-

+ -

+

-

V

-

+

-

V V

- + - + -

+ —

+ - + +

V -

+

+

V -

+

V +

+

+

+

+

+

V +

+

-

+

-

V -

+ + + + + +

+ + + + + +

- V -

+ +

+ V + - + + -

V -

V n

-

+

-

+

+ + + + + n + V + + + n + + + + + + n +

+

+

V

+

+

+ - + + + - + + + - + + + + + - +

+ + + + +

+ + - + - + + V V

V V -

+

+ + + + - + + + + + + - + + + + - + - + +

+ + + + -

+

-

+ + + + + + - + - + +

+ - + + + + + +

+ +

+

V +

+ -

V +

+ + -

+ - V - + + n -

- + -

+ + + + - + + + + - + + + + + +

+ +

+ + -

+ - + + -

+ +

V -

+ + + + + + + + +

V

+ - + + + — + - + + + — +

+ + + + + + + - + + + + +

-

+ -

-

+ +

+

V +

+ - + +

+ + - + + + + + + +

+

-

+

+

+ + + + - + + - + V

+

+ + + - V + - + + - + + - + + + + + + V + + + + +

V +

+

+

+ + + -

V V

V

+ + + + +

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

+ + + + +

-

+ + +

V V +

+

+ + — + + + + + +

+

+ + + + +

+ + + + +

Summary of species characteristics

921

Assimilation reactions and other characteristics

(D =3

.1 i

00 Q Q GO

c 9 9 u "S o o

2

1o

u

_S 'g U U U U U

3

2^ 'bb'bb


^ lA^ ^ .^ > (N ffi ^ S

(U

i

43

2

2 ^^cn • S -
D

00

X J < £ CQ U u

n n n n n

+ + +

ON >n TJ- t ^ •^^ c-i m m

-^

^

4:3 - ^

-c

O

r^ ^ "S "S "S "S "S

•I I 5 ^ ^


O J3 7^ O

GO D

O

u

j=

-«

s 2^ 2 2 a 2 a d d O a O OO

Q

Candida (cont'd) 90. + + - - + + 91. - - V - V V 92. - - - + + 93. + + + - + + 94. - - + - + + -

95. - - V - + 96. + + + + + + 97. + + + + + + 98. + + + V + + 99. - - + - + + -

- + + n - + + - V n + - V + + n

-

n n - + - n n n - + n n - + n -

+ +

100. - - + - + + 101. - + + - + + 102. - - + V 103. + + - + + + 104.

n - V n V - + n n + n - n n n

105. - + + - + 106. - - + - + 107. + + V - + 108. - - - + 109. + + + - +

- + n n - + - + V + n n n - n + + + - + + -

+ + + -

—

+ +

110. - - - + + + 111. - + - + + 112. + + - - + + 113. + + + - + + 114. + + V - + + -

n

n - +

+

-

-

-

V

n - + n n V + n n V

+ n

-

+ n + n n + + n + - n - n

115. + + + + + + 116. 117. - + + - + + 118. + + + - + + 119.

n + + + n + +

120. - + - - + + 121. - - - + + + 122. + + - + + + 123. - V + - + + 124. + + V V + V

- + n n - + n - + + - + - n + - + + n

-

125. - - - - + 126. + + + + + + 127. V + + - + + 128. V + + + + + 129. + + - - + + 130. 131. 132. 133. 134. 135. 136. 137. 138. 139.

- + + + - - - V - - + - + - + - - V + - + + + + - - - - + + + - + - V

+ + -

+

- n n V + - n - + - n - + - n -

+ + n

V

-

n n n n n

- + +

V

+ + + + + + + + + + 4-

+ + + —

n

- + - +

n n + + + - + n V -

- - - n + - n

+ + + -

+ + + + +

+ - n + + + + - n + + + + + +

+ + + + + - + - + -

+ + + + +

+ + + + - + - + + + + - -

V V

- - - - - + V + + + - V - - + - + + + - + + + + + + - + + - - - + - + - - - + - + + V

V

-

+ V

-

-

n

- V V V V + + + - - - - - + - + + -

+ + + -

+ + + + n n n n n n

+

-

- - -

+

+ + + + V - +

- - - V -

+ + +

V V

V

- - - - - - V - + - + - - - n - + - + - + + - - + - + - V - V V V + - + V + - - - + V + V + - + - + + + V V - + - + + + - - - - - + + - - - - + + + + - - - + - + - + + + - + + - - - - + - + + + - -

+ + + + + + + + V - V + + + - - + + n n

+ -

+ + + n + - + + + + + + - - - + + + - n

+ + + + +

-

+ + + + +

+ + + +

-

+ + + + - + - + + + + + + V + V - + n

+ + + + +

-

+ + + + +

+ + + + +

-

+ + - + + - + + V + V + + + + + - -

+ + + + + + + + +

-

-

+ + + + +

- - - - n V

n

+ - V + - + - + + + + + V

- - - - + + + + + - + +

+ +

V V

+ + + + + + + + + + + -

-

-

_ -

n n n n n

+

+ + + + + + +

+ + + + + + + V - +

8 9 n n n

36.1 52.6 29.3 36.3 n

n n n n n

- -

+ + + + + + + + + + V - +

9 n n n n

51.7 39.9 44.3 33.3 48.8

n n n n n

- - - + - V -

+ + + + n

+ + w + + + + + n

8 n 6 9 9

50.0 54.1 39.9 42.7 36.6

+ + + + + + + - - + + + +

+ V V + + + + + + + w - + + V -

9 9 n n 8

56.4 46.0 48.7 47.1 48.9

n n n n n

- - - -

+ + + + +

+ + + + +

V

8 n n n 9

36.5 44.9 35.9 39.5 44.1

n n n n n

+ + + - - + + + + + + + V - +

+ + + w + + + V

-

n 8 n 9 8

36.7 35.9 43.4 44.6 42.8

n n n n n

+ + + + + + V - + V - n + + +

+ + + V + + + + + + -

n n n 9 9

44.9 40.5 38.1 60.0 36.7

n n n n n

+

+ + + + +

+ + w + + + + V + V V +

7 n 9 n n

49.1 46.1 55.0 33.4 47.6

n n n n n

+

-

+ + + + +

+ + + + + V - + + + + +

n n 9 7 n

n 47.3 46.1 35.6 35.4

n n n n n

+ + + + + + - + + V +

+ + + + + + + + + + w

n n 7 n 7

47.9 38.3 36.6 37.4 41.8

n n n n n

V

- - - -

+ + + + - - + - - + - - +

V V V

-

-

V V

-

-

+ + + + +

+ + + +

+ + + +

-

+ + + -

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

OH

H

Summary of species characteristics

922

Fermentation

M o

a> «

u

Assimilation reactions and other characteristics

g

o

§1 §2 I I I o o c^ :§ J oi t^:^

Species Candida 140. C. 141. C 142. C 143. C 144. C

(cont'd) nitratophila norvegica odintsovae oleophila oregonensis

145. 146. 147. 148. 149.

C. C. C. C. C

of;a//5 palmioleophila paludigena parapsilosis pararugosa

150. 151. 152. 153. 154.

C.peltata C. petrohuensis C pignaliae C. jom/ C. populi

155. 156. 157. 158. 159.

C. C. C C. C.

pseudointermedia pseudolambica psychrophila quercitrusa quercuum

160. 161. 162. 163. 164.

C. C. C. C C

railenensis rhagii rugopelliculosa rugosa saitoana

165. 166. 167. 168. 169.

C ^a^e C. salmanticensis C. santamariae C. santjacobensis C savonica

+

V

+

+ + - + +

+

+ -

V V

+

+

+

+

V +

V V V

V

+ + +

+

+

V

+

w

+ + + + — +

+

o o o

o o

s o

(U

111 °
n ^

+ + + + +

+ + + +

+ + + +

+ + + -

+ + +

+ + -

+ - + + + + +

- + + + - + + - V + - + - -

+ + + + +

+ + +

+ + +

+

+ + + + + + + + - + + + + + + - V - — + + + + - - + + + +

+ + + +

+

+ + + +

+ + - + — + + - + — + + - + — +

+ + +

180. 181. 182. 183. 184.

C C. C. C. C

+ + +

185. 186. 187. 188. 189.

C. 5/e//«^« C succiphila C suecica C. tanzawaensis C ?e«ww

sonorensis sophiae-reginae sorbophila sorboxylosa spandovensis

+

V V

V

+ + + + - + + + + + + - + + +

+ + +

V -

+ - + + +

+ +

V

+

w

V V V V

V

+ + + + + + + +

+ +

V

-

V

+

—

V

+

-

V V +

+

+

-

V

+

n + + + + + -

-

V

+ V

V

+

+ - + + + + + + + + + + + n + +

n + - + + -

+ - - V + - - +

V + +

V +

V H

+

- + - +

— -

+ + +

+

-

+

+ + + + +

+ + + + +

+ + + - + + + - + - + +

+ + + + +

- '+" - + + - - +

170. C. schatavii 171. C sequanensis C. shehatae 172. var. shehatae 173. var. insectosa 174. var. lignosa 175. C 5'?7£;ae 176. C. silvanorum \11. C. siluatica 178. C. silvicultrix 179. C. 5o/an/

+

-

V V -

V +

+ - + + + - + + - + + -

+ + + +

+ + + + + + V + + + + +

+

-

-

V -

+ + + + +

-

+ + + + +

V +

V

V

+ + + + - + + + + + + + + + +

+

V +

+

-

Q Q

+ + + + + + -

+ - - + + + - - +

+

V -

+

- + V -

+ + +

V +

V -

V -

V H

V -

V V

-

V

+ + + + +

-

+ - + - + + + - + + + + -

+ + + +

+ -

+ + + + +

+ + + + +

+ + + + + + + + + + - + + + + - V - + + + + - + + + + - + + + + + + + + - V + + - +

- + + - + +

+ + - V + + + + - + + + + + + + - +

-

- + + - + + + + + + +

+ + + +

+ + + + +

- + + + - - + - +

+ + + +

- + + +

- V+ - + + + - + — + -

+ + + + - + + + + + + - + +

+ + + + ,+ +

V V + -

V +

-

-

V + -

V +

-

V V + -

V +

-

—

-

+ + + + + + + +

+ + + + + + + +

+ + -

+ + + + +

+ - + - + + + + + - + + + — - + +

n + + + + + + +

-

+

V

+ + -

+ + + +

+ V + + + + + - + + + + + + + + + +

- — — -

+ + + + + + + + - + + + + - V + + ++

+ _ - + V + + + + - +

-

+ n + -

V +

+

ill

W O W P^ O

+ _ + +

+ + + + + + + V + + + +

+ +

-

+

1 §12

S

+ + + + +

+ + + + +

w

Q Q hJ Q ^

+ V + - + - +

-

+ +V

V V V

O C O (U 5

00 Q

+ + + + + + + + - — — + + V + + + + + + - + + - - + + + +

+

^ ^ ^ S9 .S -S 2^ S S ^ o

J

+

+ + + +

a o

2 13 ^ 13 "^

+ + — + - + + - - + + + + + + + + + + - - + + +

-

3j M

•^ 2 o .-§

V -

V +

-

V -

V +

-

V -

V +

-

- + + + - - +

- — —

+ - + + + + + + - + + + + + + + + + + — + - V + — + + + - - + + - + + + V + + - + + + + + V + + +

+ + + +

- +

+ + + + + V+ - + +

+ + + + + n -

- + + + - + + + - - +

+ + +

- +

+ - V +

— - + - + - +

II + II _ _ + _ _

—

- + - +

V

+

V

+ +

-

V +

- V

-

-

V

—

+ -

+ + + +

-

+ +

V +

+

+

V +

-

+ + + +

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

V+ - + V+ - + + + - + + +

V -

+ + + + + + +

+ + + + + + +

-

+ V

+ - + + + + + + + +

+ + V + 4- + - + + - + - + + V+ - + +

Summary of species characteristics

923

Assimilation reactions and other characteristics

o

o

§ § o

9

t

o

on

o Q

•J Q

'o o

0) "o

11

o

^

bO bO (u

Candida (cont'd) 140. - V - - + 141. - + V + + 142. + + + + + 143. V + + V + 144. + + + - + 145. - + + + + 146. + - + + + 147. + + + - + 148. + - + - + 149. - - - + + 150. + + - - + 151. + V - + + 152. - - - - + 153. - - - - 154. + + + - + 155. + + + - + 156. - - - + + 157. - - - - 158. + - + + + 159. + + + + + 160. + + + - + 161. + + + V + 162. - - - + + 163. - - V + V 164. + + + + + 165. V V V V + 166. + + + + + 167. - + + V + 168. + + + - + 169. - + - - + 170. - - + - + 171. - + + - + 172. 173. 174. 175. 176. 177. 178. 179.

+ + + +

-

+ + + +

+ -

V

—

+

n

n

+ + n n n n + - + - + n n + + +

+

V

n

n - + +

+ + + -

+ + + -

- + + + n + V

+ V

-

+ + + + +

n n n n + n

n n n n n n

n

n

+ + n n + n

+

+ -

H—

V V +

n

n

V

V

V +

V

n

+ +

+ + + + + + + +

+ + n + n

n n n -

-

—

+ + V - + + + + V - + + + + - + + + - - V V + V + + + - + + - - - + + + + + + + + + + + + +

-

-

+ + + -

+ n n + n n + n n n n n n n n - - - H— n n + - -

+ + - + + - + + + + + + + -

+

- -

n

V V

n n n n

+ -

+ -

-

- + + - + +

n

+ + + + +

- + + - - - 185. - 186. - + 180. 181. 182. 183. 184.

—

+ n n V n

+

187. + V - - - + 188. + + - - + + 189. + + + V + + -

o

ffi ;^ ;z; > (N lA 00

< £

n V +

V

-

n

-

PQ U

+ +

+ -

+ + + + + + +

+ + + + + + +

V

+

V

+ + + +

+ + + + + +

+ + + + + +

+ + + + + + + +

+ + + + + + + +

+ + + + +

+ + + - + + V + + + +

+ + + + - + V - + + + + + - + - - + + V + - + + + - - + + + + + + + + + - + + + + + +

+ + + + + + + + + + V -

+ + + +

+

+ + + -

+ + + + + + + + — + +

-

-

+ + - + + + + - + + - + -

+ + - - V - + V +

— + + + + +

+ + + +

-

- V - V H + - + + + + + - + + -

+

+ + - +

+ + -

-

+ _ + -

+ + V

+

- + + - + - - -

+ + + -

V

V -

+

-

+ + +

+ -

- -

+

V

-

+ + + + + + + - + + + + + + + V- + + + + + + + + + V

- + + +

- - V - - + — + -

+

+

-

— + V - + — + + — — — + + + n V - + V V + - + + n V + V V + + + + V - + + -

+ + + + + + + + + + + + + + + + +

- + + + + -

V

+ V - + -

1

ft D

00

U

+ n + - n

o

+ + + + + + + + + + + + + + + + +

V

X .S a> X OS O XI

u u

u >^

7i '^'^ -c s

1 i s 11 i 1:11 ^ S 1 11 < m i i C

1

_o

+ + +

n n n n n

+ + + V V + + + + + V - +

-

n n n n n n n n n n n n n n n

+ + + + + + + V - + + + + + + + + + + + + - + + + + + - + +

-

n n n n n n n n n n n n

+ +

- n - - n - + - - - n - + + - - -

w

V

-

- + n + + - + + V - -

-

n n n n n

-

n n n n n

i 1II o O

+ + + + + + + + + + + + + + + + +

o O

X

+ + -

+ + + + w + + V + + + + +

- — - — V

+ — +

- - + + + + + + + + + + + + + +

+ + + + + + + + + +

V + + + + + + + + + + + + + + + + + + + + + + + + + + + V V +

+ + + + + + + +

V

-

— +

V

— + + + + +

+ + + + +

— +

n n n n n

f~- o m Tits "rt

1

U ^ o O ^ o o O

-

-

u u

+ +

- — V

+ + + + V V V V

- — - — 4- + + + V + - —

+ + + + + + + + + +

- — - —

+ V + + + + + + -

+ + +

+ +

V

-

V

-

V

+ + -

- —

1 o o

1

a

6 u

I +

si

o 'o

Q OH H

7 n 7 9 9

36.6 41.2 36.6 - + 41.2 - + 48.1

7 9 n 9 n n n 7 7 8 n n n 9 n n n n 9 9 9 n 9 n n n n

35.8 39.6 41.5 40.5 48.3 n 46.1 43.7 37.3 38.2 44.9 31.1 36.1 40.3 38.9 41.8 42.4 30.0 50.5 37.1 39.4 45.5 37.2 48.5 48.0 44.2 39.6

9 9 9 7 n n n 7

43.6 44.5 44.1 39.5 41.1 55.6 36.6 41.9

7 n n n n

36.1 39.3 50.0 40.3 52.7 42.0 40.4 42.6 - + 45.1 - + V 43.7 V

8 7 n 9 9

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

- + + - + -

V

-

- + + - + - + -

- + -

924

Summary of species

Assimilation reactions and other characteristics

Fermentation

g^

O

W

OJ 0,

g

g

8 ^ 2 2 o I ;|

^ 1. ^ o

g

o


u

.2

o

rt

o

^^ i i ^

o

^

Species

O O c^ S J c^ H

^ 13 ^ 3 iS 13 2 O O J c^ S U H

Candida (cont'd) 190. C. tepae 191. C. torresii 192. C. tropicalis 193. C. tsuchiyae 194. C. vaccina

+

+

+ + + + + + + + + + + +

+ + V +

+

+ + V V + + +

V -

+ - + + + - + + + + + - + + + + + + + +

195. 196. 197. 198. 199.

C. C. C. C. C.

ualdiuiana uanderwaltii uartiouaarae uersatilis vinaria

200. 201. 202. 203. 204.

C. C. C. C. C.

uini uiswanathii wickerhamii xestobii zeylanoides

Cephaloascus 205. C. albidus 206. C. fragrans Chionosphaera 207. C. apobasidialis Citeromyces 208. C. matritensis Clavispora 209. C. lusitaniae 210. C. opuntiae Cryptococcus 211. C. aerius 212. C. albidosimilis 213. C. albidus 214. C. amylolentus 215. C. antarcticus

+ -

+

+

+ + + V + -

characteristics

+ V

+ + V V V V V

-S

^ 2 o .€

oI - ^_

J S oJ S hS on Q

V -

+ + + +

+ + -

V V + +

(U

.S -o 2 <

J

Q

+ +

» s O

S^ § o c rS ^ ffi 2 Q

hJ

c3

oB o a3 ^ j^ O< Q ^

§ 5 ^ -S S

1 §^ 21 § 1 ^ 2^ b -S '3 -^ '^ pq a W tti O Q Q

V -

+ +

+ + - + - + +

V -

V +

+ V -

- + V V

+ + + V V V

V -

-

V

- + + +

V -

V +

V

+ + V + + + +

+

V

+ +

+ V

WW

H

X V -

+

V V V -

+ + + +

+ +

+ V

+ + + + + V +

V

+ -

+ V +

V +

+ + +

X +

+ + V

V

-

+ + V

+

+ +

+ V +

V -

+ + -

+

+

V

V - - V - - - - V

+ +

V -

+ +

+

-

V V V -

+ +

+ + - + - + +

+ + + + V + + - + - + n V + + V

V V + +

- + - + + + + + + + +

n

+ V +

+ +

+ +

+ + -

+ +

+

+ + + + + V +

+ -

+ + - + -

+

+

di

.S xi 2 <

+ + - + V + -

V -

+ +

+ + - + - + +

W V

-

V

+

+ + + + + + + + + + + + + +

- - - - -

+ + + + + - - + + V V + + + V + + - - +

+ + + + - + + + w - + n + + V V + + - V + - + + + - + + - - V + n + +

+ + + + +

+ + + V + X + + + +

216. 217. 218. 219. 220.

C. C. C. C. C.

aquaticus ater bhutanensis consortionis curuatus

+ + + + + + + + X V + + + + + + + + + + + + - - + - - + + + - + X + +

221. 222. 223. 224. 225.

C. C. C. C. C.

dimennae feraegula flauus friedmannii fuscescens

+ + + +

226. 227. 228. 229. 230.

C. C. C. C. C.

gastricus giluescens heueanensis huempii humicolus

+ + + + +

231. 232. 233. 234. 235.

C. C. C. C. C.

hungaricus kuetzingii laurentii luteolus macerans

+ + + +

+ w + - + - + - + + - - + +

+ +

- - -

+ + + + - + + - + V - - - + +ww - - + - - + - + V - +

-

+ + + + + w + + -

- - -

- - -

+ + + + + + w + + - - - + - + + +

+ + + + +

+ + + + +

+ + + + +

V

+ + + + +

+ + + + + - - + - + + V + + + + V + + + + X V + + +

+ + + + +

+ + - - + + + + + - + + + V - + X

+ - + - + + + + + + + +

+

+ + V + + + -

+ + + + +

- - - + - -

V V

V

+ + + + +

- + + - + - - + - + +

-

+ + + + w - + - - + - n n + V V V - - + + + + + + V - - + - n n

+ + + + +

+ + + + +

+ V

+

+ +

V

-

V V

+

+ + + + + + + +

- - - V - - V

+ + + + +

+ X + w + + + V + +

- - - - V + + + - V - - - + - - + X + + + + - - + + - - + + w + - - - + + - - w w + - - - V - n + + - - w + + + + + + + X + - + w - - - + + - - X + w + V V - - -

+ + + +

-

+ +

-

- + + - - - -

+ + X

X V V V V

+ + + +

V

+ + + + + + + +

+ + + +

+ V

+

V

-

+

-

V - - - - - - - X + X X + V - + + + + - - - - +ww - - - - - - - - V V - - + + - - + - + + + + - - + +

+ + + +

V V

+ + + + + + + + V

+ + + + + + + + +

- - + V V V V V V V

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

V + w V + + + V + + - -

+ + + -

+ + + +

+ + + + + + + X

+ +

Summary of species characteristics

925

Assimilation reactions and other characteristics

Q

o _g o

B

O c

GO Q

Q

1oo

S 2

1

O

^ ^

M bo Q Q

ffi 2 2; > (N lA

c/:i U

1

g .^ .^ .^ ^ fcS o

C/3

o 'S

O

- en

"^ 1^ ^ X J < <

d)

2 ^

eu PQ U

u

^

>. 13

g

J

O

d

-H

ON

^

«n -rj- t ^ O (N m CO Tf

cd cd cO cd c^ J3 ^ -C -C J3

1 11^1 6

6

6

5

g

d O O O O O

Q OH H

pq

m

-H GO

+ + + +

+ + + +

+ + + +

+ + n +

-

n n n n n

+ + + - - + + + + + + + + - +

+ + + + + + + + + + -

n 9 9 9 9

41.0 51.8 35.5 47.5 52.0

+

+ + + + +

+ + + + +

+ n - + + - -

n n n n n

+ + + + + + - - + V V n + + +

+ + + + +

n n n 9 9

55.3 49.7 48.8 46.5 44.1

- n -

+ + + +

+ + + +

+ + - - n - V V - -

n n n n n

- -

+ + + + V + V + + V V -

n n n n 9

33.4 45.9 38.1 48.3 57.6

-

- + + - + +

Candida (cont'd) 190. - V - + + — 191. - + + - + V 192. V V V V + + 193. + - + - + + 194. - + + - + + 195. + + + V + + + 196. - - - - + + 197. + + + + + V 198. V V V V + V 199. - - - + + + -

200. - - - V 201. + + + 202. - + V 203. + V - 204. - V + Cephaloascus 205. - + - w 206. - - - V Chionosphaera 207. - - - Citeromyces 208. + - + V Clavispiora 209. V + + X 210. - + + + Cryptococcus 211. + + + 212. + + + 213. V + + V 214. w + + + 215. + + + -

216. - + + 217. + X + 218. + + + 219. - + + 220. V + +

+ + + + +

+ + + +

-

+

X

-

X X

-

— - - - - + + - - V + - - + w + + - + + + + - V n + + - V - + + + - + + - + - - - - V + - - - + - + + - V n - - - +

- — -

V

-

n n + n n n n - n

V V

n n n n + +

-

+

-

n

- -

n n n

V V V X

226. V + + - X 227. - + + - + 228. + + + w + w 229. - + + w + w 230. + + + + + +

+ + + +

231. V + + w + + + 232. - + + w + + + 233. + X + V + X + 234. + + + w + + + 235. - X + V + + +

+ + + + +

-

n n

n n n n n n n

n n n n + V n

n n + +

10

51.6 +

X

+ + -

n n n n n n n

n n n + - n -

n n n + n - n

- - -

+ n n + n n

V

n n n n + n n n n n + n

+ + w + - n V + - V - n -

V - -

+ + + + V + + + + + + + + + +

+ n - n + + n V n + n — n

- + n n - + n n n

-

V

n n n V - n n n n n n n - - n

n n n n n

n n n n n

n + n n +

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n

V

V

37.8 39.9

- + n + + V + n + n - + n n - + n - + V + n - n n n + n + + n n

221. - + + w + w + 222. - + + - - - + 223. + + + w + w + 224. + + + - + + 225. - + + - V + +

+ + + +

n n

+ + + + + + + + + + + + + V +

- -

+ + + +

V

n n + + n n n + + n

+ -

+ + + X + + + -

V V

-

+ + n + - n + + n V - n -

n n n n n + n n n n n +

+ V + + -

-

-

-

- + n V

- - + + + - + - + V - + + - + V - + + - - - n + + - + - - + - - + - - + + + - - + + + - + + + + V V + - V + + - - - - - V - - - - + + V + - - + + - + + + + + + V - - + - - V - - V -

V

-

45.2 8 8

45.4 43.6 54.9 55.0 53.7 55.1 55.0

+ + + + +

n n n

n n + - - X + w + V n n +

+ n n n + -

-

n + n n +

n n

n n n n n n n - n

-

10 n 10 n n

n n n n n

n n n n n

n n n n n

n n n n n

-

-

+ + + + +

-

n n n n n

n n n n n

+ + + + +

+ - n n + n - n + n - n - n n n + n - n

n 10 n n 10

58.4 48.6 53.4 56.0 58.1

+ + + + + + -

53.1 n 55.0 n 52.4

+ + + + + +

H

-

n -

n n n n n

n - + - + n - n n - + - + n + n - + n - n

+ n + n n

w + w + +

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

-

- + + - + + + - + w - + w - + + -

n n n n n

n n n n n

+ + + + +

+ + + + +

n - n n - n n - n n - n

9 n 10 10 n

n

+ + n n n

w n n n

n + +

n n n - - + n n n n n n n n n

n n n n n

n n n n n

n + n n n

n n n n

n + n n n

n n n n

n -

n w + -

+ + + + +

+ n + + +

n -

n + n n n

n n n n n

+ n + + +

+ + + w +

- n n n n n n - n n + - n

n 9 n n 9

58.3 n 50.5 n 61.0

+ + n n + + + + +

+ + + + +

+ + + + +

w + + -

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

-

-

+ + + + +

+ + + + +

+

n n n n n

n n n n n

+ + + + +

- n n n + n - n + + - n n + + - n n

10 n 10 10 8

56.5 54.4 57.0 59.5 61.2

+ + + + + +

n - +

- +

V

- n n n n n -

n n - + n

V

-

n + n + n

n + + + n +

n n n n n

n n n n n

-

+ + + + +

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

Summary of species characteristics

926

Fermentation

Assimilation reactions and other characteristics

(«o 0)

W

O

lU 'U

o t3 S S 2 5C ^ a a c^ S hJ Od H

Species Cryptococcus {cont'd) 236. C magnus 237. C marinus 238. C podzolicus 239. C skinneri 240. C. ferrew5

o + + + + +

241. C uishniacii 242. C. yarrowii Cyniclomyces 243. C guttulatus Cystofilobasidium 244. C. bisporidii 245. C capitatum 246. C. infirmominiatum 247. C lari-marini Debaryomyces 248. Z). carsonii 249. D. castellii 250. D. coudertii 251. D. etchellsii D. hansenii 252. var. hansenii 253. var. fabryi 254. Z). maramus 255. Z). melissophilus 256. Z). nepalensis D. occidentalis 257. var. occidentalis 258. var. persoonii 259. Z). polymorphus 260. Z). pseudopolymorphus 261. Z). robertsiae 262. D. udenii D. uanrijiae 263. var. uanrijiae 264. var. yarrowii 265. Z). yamadae Dekkera 266. Z). anomala 267. D. bruxellensis Dipodascopsis 268. Z). to^/i/i A uninucleata 269. var. uninucleata 270. var. wickerhamii Dipodascus 271. Z). aggregatus 272. D. a/Z)/Jw5 273. Z). ambrosiae 274. Z). armillariae 275. D. australiensis 276. Z). capitatus 277. D. geniculatus

oo

SJ ^.2 ^o o .-s

Bag

13

S U H

o

V + + + + - — + + + + + V V —- + V + - V +

w

-

+ + + + +

- V + V + + + + 4- + + + +

w - w - - w -

+

-

- + —

W -

+ + + +

+ + + +

+ + + +

+ + + +

+ + + + V + + + + + + + + + + + + +

+ + + + +

+ + + + +

VV -

V W

+ - +w - + X -

VV

__ _

V V VV -

V V

V V VV -

VV

V - -

VV

+ + + V -

V -

+ + + V -

V -

V -

+ V + V - w + W + V

+ - + + - V + W -

VV

V -

V -

V -

V -

V

' "^ + + + V V VV + V VV

__

V

V

H

+ H

+ + +

+ + + + — +

V -

V +

V + V VV

- + + +

+ + + + +

WW

+

O

.S M •u c A O cd 1

__

2 2 re s ^ J .S

J Q Q J Q ^

S

|l.|.:s ^ s o W O W Cti O Q Q

+ V + V

-

+ + + + + + -

+ + + + - + + + + + +

+ + V +

W + +

+ V V + V + +

+ V + + + + V

V

-

V

V V + +

V

- +

+ + -

+ + —

+ + +

+ V W

+ + +

- + + + - + +

+ -

X -

+ + V V +

V + V V

- + —

V -

+ + -

+ +

+ + V V V

V V -

X -

+ + -

+ +

+ X X X -

H

+

-

V V + -

+ +

V -

+

-

+

+

+ X +

-

+ +

+ + + + + + + + + + — +

+ + + + + + + + + -

+ + + + - + + + + - + - + +

V + + + +

V V + V V V +

X V V V V V -

X + V + V + X

V + + + +

V V + V V V +

X V V V V V -

X + V + V + X

V + + + +

V V + + V + +

+ -

X +

V -

+ -

+ V -

-

V +

V V + +

+ + + V + + +

X + - n + + + + + - + V+ +

-

+ V + - W V -

+ + + + - + + + + + + V+ +

V V + + + + +

V

W H

+ + -

V -

+ V

V V + + + +

V

W H

+ + -

V -

+ V

V V + + + + +

V V V -

V H

+ + + + - + + + + + - + + + - + +

+ -

+ + + +

+ + + +

+ + + +

+ + + + + V + + + + + + VV + + + + + + +

-

+ + - + V + + + V - V V VV

V -

+ + + + + + +

+ - + + + + +

+ +

+ + + - + + - + - +

- + + + + + + - + - + - + +

+ X n + + - + - n -

+ + + + + +

+ + + + + + +

+ V + + V + + + + + + + + + + + + + + + w + +

+ + + + + + +

+ -

V + + V -

+ + + + +

-

+

n

+ + + +

s .s s ->^

2 Cci S £ 00 Q

O

S B a § •S -S S^ i«2 o o X) o c o u 5

V + + + - + +

V

_

+ + + +

J

^u ^g

+ + + + +

+ + + + + +

+ + -

V -

-

+ + V +

-

+ -

V + -

-

H

+ W V H

+ + + V + +

V -

V V V +

+ + V V +

V -

V V V H

+

+ -

V +

+ —

-

V -

- + -

+ + -

+ + + +

+ + + + + + + + + V+ + + +

X n -

V +

V n

V V

-

n -

-

+ + - + - + +

+ + - + - + X + + - + - + + + + + + + + - V- + +

+

+ -

+ + + +

+ + + -

V V V V

+

+ + + +

_ _ _ _ _

V +

JJ JJ

V +

+ + -

+ V V -

+ +

+ +

+ - +

+ +

- n n

+ +

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

+ +

Summary of species characteristics

927

Assimilation reactions and other characteristics

J •;< u u u u u

o D O^

S

C o

o

g

jj

o

fi o

^

(50 (Dfl (U Q Q 2

2 ^- ^ g u !s - u ^ "C .S

ffi ;Z ^

> (N «r) 00

X jj < &: m u u

n n n n - + n

+ +

n n n n n n

'

"So

o -5 ^ ^ •- I .^

C 00 Q Q !Z1 U hS

KJ

o — ^ ~: o c3

W

l ^ -H

on

V + n - + n - + n — n

-

n n n n

n n n n n

n n n n

n + n n n n - n n n n + n n n n n n n n

n n n n

n n n n

n n n n +

n + + n n + + n n + + n n X + n

X - n + - n n w - n

-

+ + + +

-

-

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

+ + + +

-

252. 253. 254. 255. 256.

+ X X + X X + + + + V + + + +

- + V - + V n - + - + - n - V - — +- + --

+ + n n +

+ n n +

n - n + n - n + n n n n n n n n n V n +

n n n n n

+ + n n +

+ + n n +

n n n n n

+ + + + +

-

257. 258. 259. 260. 261. 262.

+ + - + + - +- ++ + + + - + + -

n - + n - + V - n + + V — n - + X - n + + + - n - + -

-

n n n n n n

n n n n n n

n n n n n n

n n n n n n

n n n n n n

n n n n n n

n n n n n n

+ + + V + + -

+ - n + + V + - n + + V — n - + -

-

n n n n n n n n n n n n n n n n n n n n n

n n n + n n n + n n n V

V — - —

n V

n V V

- — n - V - n

- - n - - - - - n - - - -

+ + + +

w- +

n - n

- n n n

+ + + n n + n

+w + n n n n

- + - +

n - n n - n

- n n n - n n n

+ + + +

- n n +n - n n +n

+ -

n n n n n

V V

+ V + V + + -

- V

X

-

+ + -

V

V

+ + + + + + + + + - + + + + + - + + -

263. + + + V 264. + V + V 265. V + w Dekkera 266. V + - V 267. V V - V Dipodascopsis 268. + + V -

269. + - V - 270. + - V - Dipodascus 271. - - - V + 272. - - - + + 273. - - - + + 274. - - - V + 275. - - - + + 276. - - - + + 277. - - - + +

V

-

V

-

+ -

-

n n n + +

+ + +

V n V V n

-

- + n - + nw

n n n n n n

n n n n n n

n n n n n n +

n n n n n n -

n n n n n n +

n n n n n n -

n n n n n n X

o rt « ^

n + + n - + - + n + + n + + n - w+ + n + V + - w- +

-

o

V

- V

V

- V

V

-

V

-

-

+

n - n - n - n + n - -

n - n n - n

n n n n n

n n n n n

- - n n - - n n

V

n n n n n n n n n

n n n n n

n n n n

n n n n n n

n n n n n

n n n n

n n n n n n

n n n n n

n n n n n n

n n n n n

n n n n n

n n n n n n n n

s ^ ^

a 0 u

s0^

n n n n n

n n n n n

10 10 n n 10

51.6 62.6 62.8 53.0 57.5

n n + - n n n + + - n n

n 10

55.3 + 60.3 +

n n n n n

+ + + + +

+ + + + +

n n -

n n n

n n n n n n n

n n n n

^ + 0

d d O O O OO

^ ^ -^ ^ ^ 1 ^

D a

Cryptococcus (cont'd) 236. + V H W W + + 237. - V + 238, + + + - W + + 239. V W + V + + + 240. V + + V W V + 241. ^ V - + V - + - ww+ 242. Cyniclomyces 243. w- Cystofilobasidium 244. - V + X - - + 245. - + + X - - + 246. - V + w - - + 247. - X n - + - + Debaryomyces 248. + + - V + + 249. + + + - + + 250. - + + - + + 251. + V - V + + -

n n n + +

^ o^ m -n- t^ o ^^ fN m m ^ "eS "S "S "S u -CI ^ j3 X

Q PM H

+ + + + - + + +

34.5 n n + + n n + + n n + + n - n n n + -

8 8 8 n

60.9 + W V 56.6 + - + 66.3 + - V n + + +

n V n n n n n -

n n n n

n n n n

+ + + +

+ n Vn + + + + + n

9 9 9 9

39.7 - + 37.1 - + 37.4 39.6

n n n n n

n n n n n

n n n n n

n n n n n

+ + + + +

+ V + + + V + + +

9 9 9 9 9

38.4 37.3 39.1 39.8 37.8

- - n - - n + - n + - n + - n + - n

n n n n

n n n n n n

n n n n n n

+ + + + + +

+ + + + + + + + n +

9 9 9 9 9 9

35.2 35.4 35.8 35.7 42.7 35.8

n n + + + + n n + + + n n + +

9 9 9

33.2 - + 31.8 - + 35.1

+ + + + + + + + V

9 9

39.9 39.4

+ + + + n

9

n

- n +

+w + n n n n + w+ n n n n

+ + + + + + n + + + + + + n

9 9

n n

- n + - n +

n n n n n

n n n n n

n n n n + + +

n 9 n n n

45.6 41.9 45.2 42.2 40.0

n n + + + + + n n + + n

9 n

34.3 - n + 43.2 - n +

n n n n n

-

n

- n n - n n - n n

- n - - n - n - - n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n n n n n n n n n n

+ +

V V

n n n n n

+ + + + +

+ + + + +

V

-

V

-

V

-

V

-

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

-

V

-

-

V

-

-

V

-

-

V

-

-

+ + + +

-

-

-

V

n n n n n

-

+ + + + +

928

Summary of species characteristics

Assimilation reactions and other characteristics

Fermentation

Species

^ o ^ a

o o iS o

w o S (^

^ o ^ S

i> o -S J

o o S "^ ^ -^ Pi H

«

O O
o

eg

O

^H +s ^

J5

(U (u 2o t« 2n O

-S -^ ^

^ 9, o -^


O O J c^ S U H

U O

.S 'bb

U O

M £ Q O rt J ,

HJ

Q Q J

D ^

~

^

•S -S ^ § o B 2 2 2 iS ^ -3 j ^ ^ < < ffi 2 9 7 "S S

^ "o --

1 8^ 21 11 W 0

W Pi 0

Q Q

J S 0^ 2 £ on Q

Dipodascus {cont'd) 21S. D. ingens 279. D. macrosporus 280. D. magnusii 281. D. ovetensis 282. D. spicifer

V

n

+ X +

X n

+ + V

+ + + — + + + +

—

+ + V

V

n

283. D. tetrasperma Eremothecium 284. E. ashbyi 285. E. coryli 286. E. cymbalariae 287. E. gossypii 288. E. sinecaudum Erythrobasidium 289. E. hasegawianum Fellomyces 290. F. fuzhouensis 291. F. penicillatus 292. F polyborus Fibulobasidium 293. F inconspicuum Filobasidiella F neoformans 294. var. neoformans 295. var. bacillispora Filobasidium 296. i^ capsuligenum 297. i^ elegans 298. Ffloriforme 299. i^ globisporum 300. i^ uniguttulatum Galactomyces 301. G. citri-aurantii 302. G. geotrichum 303. G. reessii Geotrichum 304. G. clavatum 305. G. fermentans 306. G. fragrans 307. G. klebahnii Hanseniaspora 308. //. guilliermondii 309. //. occidentalis 310. //. osmophila 311. //. uuarum 312. //. ualbyensis

+

n

+

+ +

313. //. vineae Holtermannia 314. //. corniformis Hyalodendron 315. //. lignicola Issatchenkia 316. /. occidentalis

+

+

V -

V V -

V V

+ -

+ + -

V +

V -

V V

V

+

+ -

+ + + + +

+ + - + + + - +

- - +

+ V -

+ X -

-

+

+ X V +

+

+ + - V

+

+ V +

—

+ +

n n

+ +

+

-

V

V -

+ +

V

-

V + -

-

V

+ +

+

-

+

V -

V H

V

- +

+

+

+

+ + + - + n -

- + - + - + +

+ + + + V+ + + + + + + + + + + + + + + +

+ + V V

+

+ ww + - + + + + V + -

+ +

+ + + + + + + + + + + + + + + + + + -

+ + + + + + + - w + + + + + - + + + + + +

+ V+ + + + +

+ -

V +

+ + + + + n -

+ + + + + + +

X + V + +

X +

V +

V V

-

X + V + +

X +

V +

V V

-

w w

V+ + + V+ + +

V V V -

V V

-

W X -

+ V + +

X X V + + +

-

+ V -

+ V + +

-

- w - V- + +

V V

n

V

n

+ + + + + + + + +

+ + + V + V

n n n

+ + + +

+ + + +

+ + — + +

+ + + + +

X + - + + + + + - +

+ + -

+ + V

w + + -

+ + V + X

+

w + + + + V +

+ + -

+ V

+ +

+

+ V -

V -

+

+ + +

V

n

n

+

V V H

n n

V

n +

- n n n n n n

n n

-

n n n -

+ + -

n n -

+ + - +

+ +

+ + - + -

+ +

+

V + +

+

- + + + + +

+ + + + w + +

+ + - + + + + X- + + + V- +

V

n n n n n n

V

+ _

+ + - + + X+ + + - + + X+ +

+ + + + -

+

V

+ + + —

n n +

+ -

V + +

+ + - + - + + + + -

V -

+ +

V +

+

+ + + + - V- + + + + + + -

VV V -

+ +

_ + V

n -

-

+ + + V+ + +

V -

+ +

+ + V+ - n -

+ V- + + + +

+ + - + + + +

+ + + + -

V +

+ V+ + n n n

n + + + - + +

+ -

V

+ + -

+ X

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

Summary of species

characteristics

929

Assimilation reactions and other characteristics

1)

5^

S

^

C 2

2

fl

w O

^ 'S ;§ J "S i -s

? ^ 9:]; ^ .^ I Dipodascus

O

(50 (30 (U

' Q Q "g

111112 ^§

.S - a> ^ -C . S

2 -§ I § S I • S t < I o I -I S

K iS !^ j> (N lA c^

•^

.

H

iS

^

+

n n n n n

n n n n n

5^

t-i

X J <: fi. m u u

- -

n + - n n n + - n n n - - n n n V - n n n - - n n

n n n n n

n n n n n

n n n n n

n n n n n

n

n n n n n n n n n n n n

u

1 O 2:

•5 "frt

c^ 13

jO

(U _C

oi n —Io

GO

n n n n n

n n n n n

X .S 2> X

u u u u u o m ^ t~- o

r> o ^ (N (^ ro -^ "S "cS "S "S "S

°^ ^

XI X! X J3 X!

"^ "^ ^ ^ 1

o

5 5 o o o o O O O O O

n n n n n

n n n n n

PQ

;^

ID

Q ol H

(cont'd)

278. + 279. V 280. V 281. - - V + 282. - + - +

+ + + + + + + -

283. + Eremothecium 284. 285. V 286. + 287. - V V 288. Erythrobasidium 289. - + - + Fellomyces 290. - + + 291. w w + V 292. + X + w Fibulobasidium 293. + w + + Filobasidiella

+ + -

294. + + + 295. + + + Filobasidium 296. + + V 297. 298. + + + 299. - + + 300. + + + V Galactomyces 301. + 302. V 303. + Geotrichum 304. - + - V 305. - X - + 306. + 307. + Hanseniaspora 308. - + V 309. - + - 310. - + - 311. - + V 312. - + - 313. - + Holtermannia 314. V + + Hyalodendron 315. X + n Issatchenkia 316.

(U o^

S^ -3 ^

V V -

+ V -

-

X W -

n n n n n

-

-

- n n

- n - n - - - n - n -

-

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

- - - + n

n n 9 9 n

39.5 41.5 37.5 51.3 30.6

-

n n n n n n n

n n + + + + n

n

38.4

- n +

n n n n n

+ + + + +

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n w n V

n n V

n -

+ + -

n + n

-

+ n n

n n + n n n n

n n n n - + n

+ + + + + + + + +

- - - -

n n n

-

+ + n + + n + + n

n n + n n n n n n w n n n n n n + n n n n

n n n

+ V +

n V +

-

+ n n

n n n n n n n

- - - - - - -

n n V n n V

n n + n n n n n n + n n n n

- - - - - + + n - - w - - -

+ +

V V + V V +

+ + + V V -

+ + + -

V +

V V +

+ + V V + V -

+ + + + + V + V -

-

V

n

n n n + n n -

-

n n n n n

n n n n n

n n n n n

n n n n n

-

n n n +

n n n n n

+ + + +

n + n n +

6 5/6 7 6 9

n 43.3 n n 41.8

-

n n + + n -

-

3(H2)

53.5

+ - +

10 10 10

54.6 48.9 49.6

+ + V

n

+ n V

+ + + + +

+ + + + +

V +

+ + -

V +

+

- - - -

W V X n

n w + n + - + n

n n + + n + + + + n + + + + n -

-

n n

-

n + + n

n n + + n -

-

n n n n

-

n + + n n + + n

+ + + + + + V + + + + + V -

10 10

55.0 56.8

+ - + + - +

-

10 n 10 n 9

49.8 n n n n

+ - V

-

n n n V + - n - - n n X - - n + +

- -

+ + + + +

+ + + + +

n n n n n

V n + + n V

-

n n n n

+ + + +

+ + + +

n n n n

-

+ n V

+

+ n V + - V + n V + - V

-

n - n n n n + - n n n - - n n

n n - n n n n n n - n n n n n n - n n n n

n n n n n n n n n n n n n n n n n n n n n

n n + + n - n n + + + V n n n + + + V n

n n n

38.6 43.6 35.7

- n + - n + - n +

n n n n

-

n - - n n + - n n - - n n + - n

n n n n

n n n n

+ + -

n n n n

n n n n

n n n n

+ + n n V n n V n n - -

n n n n

32.1 44.7 43.2 40.4

-

n n n n n

-

-

-

-

V

-

-

-

6 6 6 6 6

33.5 35.4 40.1 33.9 29.4

6

38.7

-

n n n n

+ + n n n + - n n n

+ + + +

X + -

n n n n n

n V n

+ + + X +

+ + + + +

+ + + + +

+ + + + +

n n n

n

V + + V

n n n n n

+ + + + +

n w n n n

- + - + - +

n n n n

n n n n

n n n n

n n n n

n n n n

+ + + + +

-

+ + + + +

+ V n - - n + - n - - n + V n - - n + V n - - n + - n - - n

n n n n

n n n n

n n n n

n n n n

n n n n

+ + + +

+ + + - - + - - + + + + + + +

+ + + +

+ + + + n + + n +

+ + + n - - n

- -

n n n n n n n

n n - n + + n

n n + + V V n

n n n n n n n

n n n n n + n

n n + + n

n n n n n n n

n n n H— n

n n n + + + -

- +

+

+ + + -

n n n n

+ + + +

_ __

n

+ n V

9

n

X n

7

41.0

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

930

Summary of species

Fermentation

characteristics

Assimilation reactions and other characteristics

.S bO

- M O ^

U (U g

o

4>

^

Species

o a c^ ;^ J »i H

Issatchenkia {cont'd) 317. /. orientalis /. scutulata 318. var. scutulata 319. var. exigua 320. /. terricola Itersonilia 321. /. perplexans Kloeckera 322. ^ . lindneri 323. 324. 325. 326. 327.

K. K. K. K. K.

O O J c^ S U H

O

g gQ

O .-a

rS rg ,

o 13 1 13 3 -i X ^^ ^^ M^ 6

< < aJ 2 O < t3

^ ^ ^ s -S S a

VV + + V + +

v v v v

V V -

J Q Q J Q ^

S

W O W bi O Q Q

-\— -\ x x -

+ n

V -

+ V

H + v H + + -\ + + H—

aestuarii africanus bacillisporus blattae delphensis

328. K. dobzhanskii K. lactis 329. var. lactis 330. var. drosophilarum 331. K. lodderae 332. K. marxianus 333. K. phaffii 334. K. polysporus 335. K. thermotolerans 336. K. waltii 337. K. wickerhamii 338. K. yarrowii Kockovaella 339. K. imperatae 340. K. thailandica Kurtzmanomyces 341. K. nectairei 342. K. tardus Leucosporidium 343. L. antarcticum 344. Lfellii 345. L. scottii Lipomyces 346. L. japonicus L. kononenkoae 347. ssp. kononenkoae 348. ssp. spencer-martinsiae 349. L lipofer 350. L. starkeyi 351. L. tetrasporus Lodderomyces 352. L. elongisporus Metschnikowia 353. M. agaves 354. M. australis M. bicuspidata 355. var. bicuspidata

^—

+ + +

+ + V + + + +

+ + + + + + +

+ + V + V + + + + V + V V V

v v + v v v v - v v + + + H— v H— + + + + v - + +

+ V -

V -

+ +

V + V - V

+ V -

V -

+ +

+ V -

V -

V +

+ -

V V

+ V -

V -

+ V

+

+ - + +

+ + - +

+

V V V - V _l_

+ + V H

V V

+ - + - +

+ + + + - +

+

+ + V + + -

+

+ + V -

-

-

-

+ + V +

+ - + + + + + - — - + H—

+ - + +

-

+ + V + + + +

+ + V H

V + V + + V

- +

+

XV

X V ——-

+ +

w V

+ + + + + + +

+ + + + - + +

- W -

V + + X

+ + + + + + -

V -

V -

+ +

w - + +

+ + + V - V V - V

V

+

+ +

V X

V -

V

+ - +w- + + + +w+

+ V +

V V V + + + + + -

+ + + + + V + + + + + + V V + + + + + + +

-

+ V V + V V V

V

+ + + + +

V

V V

H

h

+ + + + + - +

-\— -

h

+ + + + + + + + X V + + + +

-\

+ +

w

+ + + + - + + + + + + + + v

+ +

+ + + + V + V + X + X

+ + V + + + +

V

+ + + + +

+ + + + + + + + + + + + + V

-

V V

—

V V

V V V V V

V V V V

+ + + + +

+ +

+.

w

V V

-

n n n n n

V V + +

+ V

+ + +

V +

+ +

X V + V V + + V V V V V V V + V + + V + +

+ — + + XV

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

+ - + + ++ + +

Summary of species

931

characteristics

Assimilation reactions and other characteristics

w rt C o (D 3

u cj C o 3

fl T

V

lu 'g 2

2

CI

i2 13 i^ 'G -^ Jj

S -^ O ' Issatchenkia 317.

323. - + 324. 325. 326. 327. 328. + + 329. 330. 331. 332. 333. 334. 335.

^

{cont'd) + + X -

318. X 319. X 320. Itersonilia 321. - V V Kloeckera 322. - + v Kluyveromyces

O

•^ .-§ ^ ^ o ffi ^ Z > rs lA

<

PH

m U U

J W m -H oQ D

O

r-H O

d

©N -H

mil

rt

cd

d 5 5 5 6 6 O O O O O

7

40.0

- +

+ +

n n n n n n n n n n n n n n n n n n n n n

n n n + - n n n n n n n n V - n -

n n n + n n n n + n n n n + n V -

7 7 7

32.8 32.5 40.1

- + - + - +

62.0

+

- + -

n v v -

n +

nn

n

n

nn nn + nn + nn nn

+ +w

- + + V-

nn

V + -V + v v - v+ v+ v - V - + + V-- + - - + VW + + V

nn nn nn nn nn nn v n n

336. 337. - H — v v 338.

nn nn nn xwn — — + + n

- +

+ -

+ + - n

n + n n - n n - n n - n n - n

+ + - +

w - w -

V n n n n + n

+ + V -

-

n n n n n

n n n n n

n n n n n

+ +

V n n n n V n

V V V

V n n n n + n

+ + V -

- n n V n n - n n - n n + n n

n n n n n

n + n n + n n - n n - n n + n

+ n n n n + n + n n n n + n X n n n n - n n n n n n n n n n n

n n

V

+ +

—

+ + + + + w + + —

+ +

-

n n n n n

+ + + +

-

-

-

n n V n + w n X + n

-

n n

39.8 38.5 38.0 34.2 40.2

n -

+ n + + n V n

n

42.6

n n n n n n n

+ + + +

V n

6 6 n 6 n n 6

40.4 40.4 35.6 41.3 35.3 35.3 46.2

n n n -

+ n + + + V n + n + + + V n - - + + n

n n 6

45.7 42.2 34.5

- + -

-

10 10

50.7 48.5

+ V + + + +

-

n n n n

- - - -

+ + + + +

+ + + + + + +

+ + + + +

+ + + + + + +

n n

-

+ w + w

n n + + n n + +

n + n + n + +

V n

+ n + n V n

n n

-

V

-

-

V

-

-

V

-

- + -

- + n - + + n n + + - n n n

n n n n

n n n n n n - -

n + - n n +

-

+ n + n

- _ - -

+ + + + n

10 10

52.5 58.2

+ + - +

- + n + + —hn + n n - + n + + + v

n n n n n n n n n + n n + n n n n n n n

n n + + - w n + - +

-

+ + + + +

n n - n n n n n n + + - n n n n + + n - n

10 10 9/10

50.5 57.7 60.0

+ - V + - + + - V

n - n - n n n

n n n n + n n

n n n n n

------

n n n n n

+ + + + +

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

-

-

-

-

-

n

n n n n n

n n n n n

n n n n n n + n n V n n + n n

n n n n n

n n n n n

n n n n n

n n n n n

X V X

n n n n n

n n n n n

48.3 n 48.2 47.5 48.5

-

V

-

V

-

V

n n + + + + n

39.7

-

-

n 47.0

-

-

+ + n + +

+ + + +

+ + + + +

+ + + + +

+ V + V + n n n n -

n n n n n n n

353. - + w - + + 354. - w - - + - -

n n n n n + n n n n n n w n

+ + + + + + - +

+ + + + n + +

n n n n n

+ + - +

+ +

+ - n

+ n

41.9

+ + + + n

+ + -

355. - X + - V

Q PL, H

n n n + + + +

+ VV

+ V V X X V V V VwV

'§2 3

cd

n n n -1— n v

- + +

347. + V V 348. + V V 349. + + + 350. V V V 351. + V V Lodderomyces 352. + - X Metschnikowia

J

c^

n n n n n n n

- - n - - n

- -

cC

n +

+ - + - + v -

Kockovaella 339. - X + - X V W 340. v v — - w v v Kurtzmanomyces 341. - w + 342. Leucosporidium 343. + 344. - + + W W W 345. + + + Lipomyces 346. - v + -

(L>

;5

2 X

u+

O ^H So (N| Tt m f^ m Ti13 S, o^

1/3 i n

"o

u

.S g § 'S u u u u u

tjfl

•-s o

9 9 10 9 9

9

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

48.0

— —

932

Summary of species

Fermentation

characteristics

Assimilation reactions and other characteristics

.5

^.2

° ^ 2 S B SM Species

356. 357. 358. 359. 360. 361. 362.

M. bicuspidata {cont'd) var. californica var. chathamia M gruessii M. hawaiiensis M. krissii M. lunata M. pulcherrima

363. M. reukaufii 364. M. zobellii Moniliella 365. M. acetoabutens 366. M. mellis 367. M. pollinis 368. M. suaveolens Mrakia 369. M.frigida Myxozyma 370. M. geophila 371. M. kluyveri 372. M. lipomycoides 373. M. melibiosi 374. M. monticola 375. M. mucilagina 376. M. udenii 377. M. vanderwaltii Nadsonia 378. A'; commutata A'; fuluescens 379. var. fuluescens 380. var. elongata Oosporidium 381. O. margaritiferum Pachysolen 382. P. tannophilus Pichia 383. P. acaciae 384. P alni 385. P. americana P. amethionina 386. var. amethionina 387. var. pachycereana 388. P. amylophila 389. P. angophorae 390. P. angusta 391. /? anomala 392. P. antillensis 393. 394. 395. 396. 397.

P barkeri P. besseyi P. bimundalis P. bispora P. bouis

398. P. burtonii

O O t^ :§ J oi F

O O J c^ S U H

-\ + + -\—

+ + V + + + + + + V + + + + + V + + + + +

H + v

+++++++

+ v x w

+ V V + + + + + + V + + + +

^— + + + w + v

+ + +

H— - n + n + n + v - n

+ + + + -

+ + +

+ V

+ + + +

o .^

< HJ

< C^ Q P

- V - V + - - V + - - +

-

- - - - + - - - - + - V - ++ - - - V +

- + - + - V - V

-

- - - w+ - V - - + - V - V + - - - X

V

-

V

-

+ + + + +

-

- — - -

+ + + +

- o 2 _ 2 •S I

g 2 re

J S 0^ S

+ + + + + + + + + + + +

M

C .C3 W g

V V V

- V V

W O W Oil O

J

- - V - n - - +- n - - +- n V - + - n

n n n n

-

n n n n

Q Q

- - - ++ - X - ++ w + - - - w + + - X - + + X V

X V

w + w +

+ + + + +

- w- ++ - V - ++ - +- ++ - +- ++

n n n n

+ n + +

+ w + +

+ + + + + + + +

+ - + + + - + + - + + - + + + + + - + + - + + - +

X

+ -

- ++ - - ++ - - +n V - + V V

+ v v v - v -

_ _ _ _ _ _ _ _ _ _

- - - ++ - ++ - - ++ + - +

+ + + X + + + + + + + + + V

+ + + +

+ + + +

+ + + + + V + + + + + + + + + +

V

- - - -

+ + + + V + - + + V + - - - + + - - + V - - +

V

-

-

+ + + + + + + +

+ + + + + + + +

+ + + + + V

+ + + + + + + + V +

+

V

+ + + + + V +

+ + + + + + +

_ _ _ + + + x +

+ + + + + — + - +

+ - V

+

+ V + + + - + H— + v - H— - + x -

+ H— + H— + + + v + v - v + + -\ v H— v v - - v + v + x - x +

+ + - + - + + + + + + + + + +

-

V

-

-

+ V V + V

+ + + + + +

+

-

-

+ + + + + + + + + + +

+ + + +

+ + + + + + + V + + + +

V

X

+ +

+ + + + +

- - - - V

+ + + +

+ + + +

+ + + +

+ + + +

+ + + + V

- -

-

+ +

- +

V

+ + - +

- - +

+ +

+ V

- - -

V

V V

+

V

V

-

V

- -

V

- - - V - +

+ + + +

- - V V

+ V

+

+ +

- V - - + +

-

- + +

+ - + + + + V -

-

+

V

-

X +

-

+ + + + - + + + + - V - + + + + - + + + + + + + +

+ + +

- -

- + - + + - - +- ++ + + + V + + + + V - + + -I-\-+ + + + - - - - + + + + - - - + + + + - V - V X + + - - - + + + + + + - + +

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

933

Summary of species characteristics

Assimilation reactions and other characteristics

1 ^3

^

-§ ^ ii I 2 2 I

2 |p

o ^ I § S I •S

I I S I ^ ^ §X

ffi IZ Z

M bicuspidata 356. + X + - V 357. + X V 358. - + V - W 359. - + W - + + 360. + + + 361. V + + - + 362. + + + V + V 363. V + V - + 364. + + Moniliella 365. - - n V V 366. - - n w w 367. - - n + n 368. - V n + V Mrakia 369. V + + Myxozyma 370. + + 371. + + + + V 372. + + 373. - + X - + 374. + + V + + 375. + + + V X X 376. + + + X + X 377. + + + + V Nadsonia 378. + 379. + - - + 380. + Oosporidium 381. n + Pachysolen 382. - + - Pichia 383. + X V 384. + + + + 385. X + X + 386. + 387. + 388. + - + 389. + X 390. + V V 391. + + V 392. - V 393. 394. 395. V + + 396. X X + 397. + + + 398. + + V

bO bo (o

•S I O ^ ^ ^.B

^ 1III! s o o O O O O O

a

^

-

47.6 47.5 39.2 46.7 45.4 44.2 45.6 41.3 47.5

-

V

-

61.2 58.7 50.4 59.9

+ + + +

n n n n

+ + + +

n

rt

13 "S "S ^ "S xi J=l ^ j3

o o o o

j j w ^ 2 GO D O

>
U U U U «n ' t r^ o (N m m

^

ON

-

+ - n n n + - n n + - n + - n + - n n

X

+ + w

-

-

n n n + n + n n + n + n

n n n n

n n n n

n n n n n n n n n

n n n n n n n n n

n n n n n n n n n

n n n n n n n n n

n n n n n n n n n

+ + + + + + + + +

n n n n n n n n n

+ + + + +

+ + + + +

+ + + + + + + +w

+ + + + + + + + +

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

+ + V

n n n n

n n n n n n n

n n

n n n n n n n n

n n n n

o

^ ^ 03 ; ^ a> m 13 ^ 2 Q flH H

n n V- n n n

54.4 + - +

+ X w w + + + +

n n n n n n n n

46.4 39.5 40.9 50.3 45.2 42.4 49.2 44.6

+ +

n n n n n + n

+ V — n - - —

+ +

n n - n n n n

n n - n + n n

n n + + V

n n n n n n n

n n n H— n -

n n + + + n n

n n n n n n n n n n n n n n n n n n n n n

n n n H— n v n n n V- n n n n - - n -

n n + + + + n n n + + n n n + + n - -

n n n n n n n n n n n n n

n n n n n n n n n n n n n

-

V V

-

4- + +

-

+ + +

-

+ + + + + + + -

+ + + -

+ - n - + n - + n - V n - V

n - - n n - + n - + n + n n n - + n - V

- + n n + - n + +

n n n n n n n n n n n n n

n n n n n n n n n n n n n

n n n n n n n n n n n n n

n n n n n n n n n n n n n

n n n n n n n n n n n n n

n n n n n n n n n n n n n

n n n n n n n n

+ -

n n n n n n n n

+ + + + + + + +

+ + + + + + + +

n n n n n + + n + + n n - -

40.0

n n n n n n n n n n n n n

+

+ + V

+ V - n

+ + + + + + -

-

+ + n n + + n n

n n n n n + n

+ - -

n n n n n n n n

+ + + +

V - - n - - V - - n

n + n - n n n

n n n n n n n n

+ + + +

n n n n

+ - + - +

n n n n n n n n

n n n n

n n n n n - n

+

+ + + + +

n n n n n n n n

n n n n

n

+

+ + -

n n n n n n n n

n + + +

-

+

n n n n - - n n n n

n n n n n n n n

n n n n

n n n n Vn n n

9 9 9 n 9 9 9 9 9

n

-

V

n n n n n n n n

n n n n

+ + + + + + + + +

+ + + + + +

+ +

o U

+ + + + + + + + +

n n n n n n n n

V + +

+

+ -

-

+

n n n n n n n n

+ -

+ V

+ X

-

-

X

n o o

{cont'd)

+ + + + + + + -

J < PL, PQ U U


u

o

D

g

n - - n n - - n n - - n n - - n n + - n V n V - n n - - n n + - n n - - n + n - - n n - - n n - - n n + - n X

n n n n n n n n n n n n n

n n n n n n n n n n n n n

+ + + + + + + + + + + + +

+ + + + + + + + + + + + +

-

V

41.5 - + 41.8 - +

+ + + n + n n + n + n + n

+ n + n + n + n Vn + n + n + n Vn

32.6 n 7 7

46.0 - + 41.9 - + 43.6 - V +

7 7 7 n 7 7 n 7 7 7 7 7 8

33.1 33.2 45.4 33.0 48.0 36.6 33.6 36.2 35.2 41.5 37.1 42.3 37.3

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

_ __ + - + -

V

-

-

V

-

- + - + -

V +

+ - + - + +

Summary of species characteristics

934

Assimilation reactions and other characteristics

Fermentation

o •3

o o o u .2 o

o J 8 ^ S 2 2 eg ' species

O O J c^ ^

Pichia 399. P. 400. P. 401. P. 402. P. 403. P.

{cont'd) cactophila canadensis capsulata caribaea castillae

404. 405. 406. 407. 408.

P. P. P. P. P.

chambardii ciferrii delftensis deserticola dryadoides

409. 410. 411. 412. 413.

P. P. P. P. P.

euphorbiae euphorbiiphila fabianii farinosa fermentans

414. 415. 416. 417. 418.

Pfinlandica P. fluxuum P. galeiformis P. glucozyma P. guilliermondii

419. 420. 421. 422. 423.

P. P. P. P. P.

424. 425. 426. 427.

P. holstii P. inositovora P. jadinii P. japonica P. kluyueri var. kluyueri var. cephalocereana var. eremophila P. kodamae P. lynferdii P. media P. membranifaciens P. methanolica

428. 429. 430. 431. 432. 433. 434. 435.

+

X +

V -

W •

+

+ + + + + - + + X+

-

+ - + w - w + V

+ + V -

V

irt 'c3 ^

+ +

+

+ + -

+ + + + + + + + + + + + +

3

< < 5 5 O < "S o

Q jj

+ X

Q ;^

S

V V + V + + +

+ + + X -

+

+ X -

- + +

V V V

-

- + + +

V V

— —

+ +

- "5 2 g a^ ^

3 "^ c3

+

V -

+ +

I §9 S I - §

9 2

J

+ + + - + + +

+ + + +


o -s ^ -u 3 -I X

+ + +X - + + +

S -I .1 o

o

+ V+

+ +

+ + + + + V+ + + +

+ + +

+

- + -

+ + + + + + + + + + + + + + + +

+ + + + + + + + + + + + + + +

-

V -

+ + + + + + + - + + - + - + + + + + + + + + - +

+ V

+ + + + + + + + + + + + + + + + + + + + + + + + + +

- + - + + - + + + + X -

+

- +

+

—

V — —

+ — + - +

+ -

w -

V

+

V

+ + V V -

+ - + + —

+ -

+ + + V +

+ -

+ X

-

+ + - + + + +

+ — +

+ +

+

+ + + V+ +

+ + + +

+ + + +

+ + + w

+ + + + + + - + +

+ + + - V + V + + + X + -

+ + + + V+ +

+ w

+ + + + + + + + + + + + + + + + -

+ - + + + + w — + + + + + + + + - + -

+ + + + + + + + V+ + + + + -

+ +

V + V

+ -

+ + + + — + + + + + + - + + + + + + - w • + - ww • +

+ +

+ — +

+ +

+ +

+ + + +

+ + - + + -

+ V + +

-

X -

V +

+ + + + + + + + + + + + - + + V + V + +

- + - + + + + -

V -

+ +

+ V

+ + + + + + + + + + + V + + + +

V V

X + - + - + + X + - + - + + + + + +

+ +

+ V - V

+ - + + + +

— —

+ + + +

+ + + + + + V - + w

+ + V

+

X +

+ + - + +

+ + + + + + + + + + + +

+ +

+ + + V

+ + - + + + +

^

+ + + + + + + + + + + +

—

+ + + +

S

W O W tti O Q Q

+ V

hampshirensis haplophila heedii heimii henricii

436. P. methyliuora 437. P. mexicana 438. P. meyerae P. minuta 439. var. minuta 440. var, nonfermentans 441. P. mississippiensis 442. P. naganishii 443. P. nakasei P. nakazawae 444. var. nakazawae 445. var. akitaensis 446. P. noruegensis

U E^

^ 2 o -"S

ow

+ + + - w + + +

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

935

Summary of species characteristics

Assimilation reactions and other characteristics

o o

'i 9 9

o

-^ C S o §

^ I-I oI ^VsS

g .^ .g .^ t^ ^

ffi ;z :z; > fs lA

Pichia {cont'd) 399. - — + + V 400. V + + + + + 401. V + V - V - 402. - - + + + 403. - + + - + + -

— n -- V n - -

419. + 420. 421. 422. + 423. -

-

V

-

+ + V -

-

+ w+ V

V V

-

-

X

-

+ V V + V + V

+ + + -

-

-

V

V

+ V -

- ++ - V - 424. + + V - + + 425. + + - - + + + + V + V

426. + + + + + + 427. + + X + + X X X V 428. + + w 429. 430. - — + + X 431. - + V - + 432. + + + + + + 433. - V + - + + 434. - — V V V 435. - + V V +

436. - - + + - + 437. + + + - + + 438. V + + + + + 439. - + V - V 440. - + V - + 441. + V + + + 442. w + - + + 443. - - V - +

+

-

X V -

444. + X + X + + 445. + w + - + + 446. - + - w + w -

J

<

PH

PQ

n n n n n n n n n n n n n n n

n n n n n

n n n n n

n n n n n

J2

w

^

J3

J w ^ 2 ^ p O

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n n n n n n

n n n n n n n n n n

n n n n n n n n n n n n n n n

n n n n n n n n n n n n n n n

n n n n n n n n n n n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n — n n + - n n w - n n + - n

n -

- - + - + + - -

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n + - n n n n + - n n V - n

- + n n - + n — n

+ -

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

X

n n n n n n n n

n n n n n n n n

n n n n n n n n

n n n n n n n n

n n n n n n n n

n n n n n n n n

n n n n n n n n

n n n n n n n n

n n n n n n n n

n n n n n n n n

+ - n + - n + - n — n + - n + - n + - n — n

X

V

-

-

V

V

-

— n V n - - + n - n n — n n - + n + - n

+ -

+ - n - + — n -V n - + n n n — n

-

-

-

+ - n - + + - n - + n - -

-rj

U U

n + - n n + - n - + n

-

J 'x U U U U U o

'-^
n n V - n n + - n

CO Tf

- -

+ n V n

7 7 7 n n

33.8 - + 32.2 - + V 33.2 - + 27.9 - V 31.0

n n n n n

n n 7 9 7

+ + + + +

n - n - + + n + + n + + n

7 7 7 7 9

n 47.3 46.7 42.7 43.1 45.4 33.8 35.6 45.1 44.4

+ + + + +

+ + + + +

n - n - + + n n - + + n

n 9 7 n 7

39.3 41.0 - + 32.5 - + 39.7 - + 49.6

n n n n

+ + + +

+ + + +

n V n n - + + n + + +

8 9 7 n

37.1 - V + 49.9 - + 45.5 - V 46.5

n n n n n n n n

+ + + + + + + +

+ + + + + + + +

n V n + + n + + n +w n n - n - n V n n - -

7 n n 7 n 9 7 7/8

30.4 30.2 30.3 n 39.3 36.1 44.3 36.7

+ + + + +

+ + + + + + + + + +

n n n n n

n n n n n

+ + + + + + + + + +

X

n n n n n

n n n n n

n V n n n w

n n n n n n n n n n n n

V

V

n -

-

- -

n n n n n n n n n n

+ + n n n n n n + n n + + + +

V

V

-

V

V

V V

Q OH H

36.3 - + 40.3 - V V 46.9 - V 34.2 39.5 - + -

+ + + + +

-

PQ :2 D

7 7 8 n 9

+ + + + +

n n + - n + - n V - n

X

+ n + n V n V n w n

n n n n n

-

43

3 ^ 2 2 2 2 2 o d O O O O a

n n n n n n n n n n n n n n n

w - n + + - n n n V

CJ -J3 J3 ^

M -43

n n n n n

n - + n - + n + - n n

414. 415. 416. 417. 418. +

X

ca

(u

j ^ ^ "S "S "S "S 13 ^

+ - +

409. + + + + 410. + + + + 411. + + + + 412. V V + + 413. -

-

00

2

.2

^ 5^ c3

- + n n n - + n + - n

404. - + - + + w 405. + + + + + + 406. - + X w 407. 408. - - + + + + -

V +

J3

o

o

^, "^ 1 S

n n n n n n n n n n n n n n n n n n n n

n - + n - + - n - — n -- + n + n - n - - + n + -

+ + + + + + -

•^ d)

V

V

+ + + +

n

+ - + - + - + - + - + -

V

-

- + - + - + - + - + - + -

n n n n n n n n n n n n n n n n n n n n n

n n n n n n n + - n w n n n n -

n n + + 4- n n n n + + + + n n n + + + + n

7 9 7

35.8 42.4 48.7

n n n n n

n n n n n

nn nn nn nn nn

n + + n + + n + + n n

7 7 7 7 n

_ 47.2 45.2 47.6 + 46.1 33.1 - + -

n n + + n n n + + n n n + + + + n

9 n 7

39.4 - + 39.9 - + 37.5 - + -

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n n n n n n n n n n n n n n n n n

n n v - n v nn nw nn nnn + -nw n n x - n v

n n n + - n n n n H— n n n n + - n

+ + + + +

+ + + + +

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

V

Summary of species

936

Fermentation

characteristics

Assimilation reactions and other characteristics

(U

S5 2

M M ^

o

J

«

O O . 2 o

y JS o

Species Pichia 441. P. 448. /? 449. i? 450. /? 451. P.

{cont'd) ofunaensis ohmeri onychis opuntiae pastoris

452. 453. 454. 455. 456.

P. petersonii P. philodendri P. philogaea P. pijperi i?/7/m

457. 458. 459. 460. 46\.

/? /? i? i? P.

462. 463. 464. 465. 466.

/? salicaria /? 5co/v^/ /? segobiensis i? siluicola /? spartinae

467. 468. 469. 470. 41 \.

i? 5^/>iYw /? strasburgensis /? subpelliculosa /? sydowiorum P. tannicola

472. 473. 474. 475.

/? /? /? jR

476. i? ueronae 411. P. wickerhamii 478. Pxylosa Protomyces 479. /? grauidus 480. /? inouyei 481. i? inundatus 482. i? lactucaedebilis 483. /? macrosporus

ju

J c/3 S U

H

ii o

S S o I 9 _ •S .S ^ g S B 2 x) ^

o

c

o oi

2 2 :2 ^ -3 j;J ^

<< < pji 2 O < J Q Q KJ Q ^

WW

+ + + VV+ + +++++++ + + + + +

+

+ - + + + + V- + + -

W

X +

V -

+ - +

+

V

w -

+

+ - +

w -

+ w - V

+

V

V

w H +

H -

- W W

V

W W V V

W

+ + + X + - + V

+

+

X +

+

-

+

V -

V

-

+

X +

V -

W

+

-

V

+

+

V

V V

+

+ + + + + + + + + + — + + + + -

+ + +

+ + + + + + + + +

+

+ -

+

V- +

+

V V V V -

+ + - +

+

-

X

V

+

V +

+

-

+

V +

-

+ + + + + + + +

V V V +

V

V

W

-

X

+ + + + + + + +

+ + V + +

V -

+ + + +

+ + + +

+ + V +

+ + + + + + + + + + - + +

V

+

+ + +

+

- n - w n + n - w n - n n + +

V

V

V +

V+ + + + + + - V+ V V V

+ - + + + + + + -

+

V -

X

V

+ X V +

+ + + + + +

+ + + + + +

-

+ V+ + + - X+ - + + +

- + w+

+ + + + + + V- + + + + + + + - + +++++++ + — + + - +

+ + + +

V -

V

+ + + + + + +V + + +V

485. 486. 487. 488.

+ - + + + + +

- + + + - V V V+ +

-

+ + V

+ + + V

-

-

-5 S

+ - + + + + +

+

V

+ -

V V +

-

+

+

+ w - +

X W

+ + + + + +

V

+

+ + + + + +

V

n

V

n

+ + + + V

+ + + + + V

n

-

W O W Oi O

+ + + + + + + + +

+ + + + + + + + +

V+ + + + - V- + + + + + + + + + + - + + + + - + 4+ + + + - + +

V

V

+ + + + +

+ + + + +

+ + + + +

+ + + + + - + + V + + - + + + + + - + + + V+ + + + V+ + + + + + + + + +w + + - + +

+ + + + + + + + + + + +

Q Q

+ +

+ + + + +

+ + + + +

V

+

+ + + + + + +

+ + + + +

+

V

+ + + + + +

+ + + + + +

- + + + - + - + V+ +

+ + + + + —

3 2 ^ 2 •s I

5

J 2 ai 2 £ c/3 Q

00

+ - V+ + V+

moriformis stagnora w/wea wickerhamii

O

^ -a vp ^ ^ 13 2i

484. P. pachydermus Prototheca 7? i? i? i?

on

a a (^ S J oi H

+

populi pseudocactophila quercuum rabaulensis rhodanensis

thermotolerans toletana trehalophila triangularis

^ ii ^

t«

W O o .ti

3

+ -

w+ - + + + + - + + - + - VV+ +

- n n - n n n - n n - n n n - n n - n n n n - -

n n n +

V V n +

n n n -

n n n n

n n n n

-

n n n n

P. zopfii 489. var. zo/?^/ 490. var. hydrocarbonea 491. var. portoricensis Pseudozyma 492. /? antarctica 493. i? a/7/?/Jw

+

V

+

V

+

V

w w

+ + + + + + + + + + + + + +

V -

V

V -

V

+ - + + - + + + + + + - + +

n n n -

-

+ + - n n - n + + - n n - n + H— n n - n

+ + + V + n + + + + + n -

+ + + + - + + - + + + - + +

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

Summary of species

characteristics

937

Assimilation reactions and other characteristics

^

C

S

S ^

o

o

£>0

GO

i 9 9 1 HJ

< &: PQ U

U

—h n - w + - n - + n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

+ + V V

n n n n n

V -

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

+ + V

n n n n n

V V

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

+ -

n n n n n

V -

n n n n n

n n n n n

- +

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

V +

n n n n n

V V -

n n n n n

n n n n n

+ - n - + n - + n - + n + n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

V + + + -

n n n n n

V V -

n n n n n

n n n n n

n n

+

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

V + -

n n n n n

-

n n n n n

n n n n n

+ +

n n n n n n n n n n n n n n

n n n X n n n -

n n n n n n

n n n n n n

n n n n n n

n n n n n n

n n n n n n

n n n n n n

n n n n n n

n n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

++ + + X V -

+ + + + + + -

+ + + - + - + + -

+ + V + X -

-

- + n - + n + - n - +

+ V V V -

n V V - + n - - n n n

462. 463. 464. 465. 466.

+ + + +

467. 468. 469. 470. 471.

+ + V + + + -

472. 473. 474. 475. 476.

- + - + + V + V X+ w -

+ + + + - + + + V + V V V+ + -

+ + + + + + + + + + + + + + + + + + V + + X V

+ + +

+ -

n n n n n

- + + - + - +

w- + + w+ +

477. + + + + 478. V + V X Protomyces 479, - + • 480, + w • 481, V - • 482. + - 483.

+ V

+ + + V XX

+ + + +

484. V V V W Prototheca 485. n n n n n n 486. n n n n + n 487. n n n n n n 488. + n n 489. 490. 491. Pseudozyma 492. + + + 493. + + +

^

X

Pichia {cont'd) 447. V + + + + 448. + + V V + 449. + + + + + 450. - + - + + 451. + +

+ + + + +

•c . ;S ^ g a S « c5 :>^< •§ 2 3 ^ 2

ffi ;z; 2; > (N lA oci

- + - + - + V 457. - + + + 458. + 459. - + - + 460. + V + + 461. V V + +

j^

II11^^ i

^ B 2 g

452. 453. 454. 455. 456.

^ ">< u u u u u

•^1 (U

+ + +

+ + + + + + + +

V -

+ V + + + V

n n n n n n

-

-

-

n n n n

-----

n n n n

n n n n

n n n n

v5 D O

u+

"S "S "S rt "cS

o ^ 2 2 2 22 d d O O O O O

n 9 7 7 8

32.6 44.5 - + 42.7 - V 33.2 42.8

7 7 9 7 7

44.9 - + V 49.7 42.0 - + 42.5 - + 43.0

7 n 7 7 7

44.0 36.6 - + 42.7 44.2 - + 51.9 - V V

V n + n

7 9 9 7 n

37.8 - + 40.1 - V V 42.0 - V 36.5 - V V 41.1 - V -

n V n n V n n V n n n

9 7 7 n n

43.4 - V 40.6 34.0 - V V 36.2 - + 43.0 - + -

+ + n n - n - n n

n 7 7 9 7

+ + n n

7 7

32.9 - V 39.6 - V 37.6 36.6 49.5 - + 46.1 - + V 39.9 - V -

n n n n n

n 10 n 10 n

n 52.0 n 52.0 n

n n n - + n w

- - + n n

10

52.4

n n n n

n n n n

n n n n

n n n n

n n n n n

n n n n

n n n n n

n n n n

-

n n n n

w w V V w

-

+ + + + + + + + + + + + + + + + + + + +

+ + + + + + + + + + + + + + + + + + + +

+ + + n + + + + n n

X + + w V V

n n n n n n

n + + + +

+ X + +

n n n n

n V n -

n n n n

+ + + + + + + + + + + +

+ + + + + + + + + + + +

n n n n n

+ + + n n + +

+ n + + n

n n n n

V w -

n n n n

n n n n

+ + + +

+ + + +

+ n n n +

V n n V

+ n + n + n

+ n V n

V n n V

+

- - n -- n n n - n -- n n n - - n -- n n n

n n n n n n n n n n n n n n n n n n n n n

n n n n - n n n n n n - n n n n n n - n n

n n + + V V n n n + + V V n n n + + V V n

n n n

n + + -- + n n + + -- + n +

n n n n n n n n n n n n n n

n n n n

- n - +n - n - +n

n n + + n V n n n + + + + n

10 10

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

-

V V

-

V V

-

-

V V V -

-

V

n n n n

n n n n

n n n n

-

n n n

n n n n n n -

61.4 + - + 61.5 + - +

938

Summary of species characteristics

Fermentation

Assimilation reactions and other characteristics

^ o

a o c^ S J o:; H

Species Pseudozyma {cont'd) 494. P. flocculosa 495. P. fusiformata 496. P prolifica 497. P. rugulosa 498. P. tsukubaensis Reniforma 499. R. strues Rhodosporidium 500. R. babjevae 501. R. dacryoideum 502. R. diobovatum 503. R. fluviale 504. R. kratochuilouae 505. R. lusitaniae 506. R. malvinellum 507. R. paludigenum 508. R. sphaerocarpum 509. R. toruloides Rhodotorula 510. R. acheniorum 511. R. acuta 512. R. araucariae 513. R. armeniaca 514. R. aurantiaca

O

o

o

o

J

o

1IS
on

O

o

^ U t^

+ + + + + + +

+ + + + + X+

13

J

g

13

^ ffj ^

•5

- V+ +

00 Q

+

- - + + Vw V

+ + V V V V +

+ + + + + + + +

+ + + + + + + + + + + + + + + + + + + + + + + V + + V+ + + + + + + + + + + + + + V+ + V+

+ + + + + + + + +

+ + V+ + + +V +V + + - V + + + - + + + +

+ + + + + + V+ + + + + + + + + +

+ + + + - +

(U

o

^

o

i hJ

Q ^

+ + + + +

+ + -

+ V + + +

+ + + + +

+ + + + +

S

n n n n n

+ V V -

H

-

+ + + + + + + + + + + + + + + +

R. ferulica R. foliorum R. fragaria R. fujisanensis R. futronensis

+ + + + +

525. 526. 527. 528. 529.

R. R. R. R. R.

glutinis graminis hinnulea hordea hylophila

530. 531. 532. 533. 534.

R. R. R. R. R.

ingeniosa javanica lactosa lignophila marina

+ w + + + + + + - + + + + + + +w + V

535. 536. 537. 538. 539.

R. R. R. R. R.

minuta mucilaginosa muscorum nothofagi philyla

+ V V + - V +

+ - + + + +

+ + + + - +

V + V

+ + - +

+ + + + V+ - + + + + + + +

+ V V + V V +

+ + + + + + + + + + + + +

+ + — + + + +

+ + V + - + +

+

V H

V V + V

V V

+

+ + + V w

+ + w - + + + + + - + + + - + - + + V+ + + V+ + + - + + - + + - + + + + - + - + + + + + + - + +

V V V V V V V V

V V

+ + + +

+ + + +

V + + - -

+ + - + + + - + + - + + + +

V V

W +

+ + +

— + - + + + + +

+ + w + + + V V V V V V

+ + + -

- + + + - + + + + - + - + + - + + + +

+ + + + +

+

V +

-

-

V V

V V V

+ + V

+

V V -

+ +

+ + + + +

V X

+ +

V V -

- + + — + + + + + + — + + + W H

V- + +

V V V V

+ + V V V -

+ - V

V

+ +

+ + - + - V V + + - + - + +

+ +

V -

+ + +

V V V V

+

+ + + + +

- + + + - + +

X

V H

+ +V + V V + + + + + + + + + + + + + + + + + +

Q

V

+ V V + + V +

+ -

O Q

+ + V- + + + + + + +

+ +

+

o

+ + + - + + - V + V - V + + - + + + + - + +

+ + + + - + +

+ + + +

:2 13

w O w fti a

V +

V V V

+ - + + + + + + +

w -

- + w + - n n

+ + + + + + + + - + + + + - +

1

o ^ ^ •^ t3 S B ^ ^

< <s J Q Q

+ + + + + + + + w +

w + + + + - + -

•S wo S Q

+ + + V

520. 521. 522. 523. 524.

+

(U

o

+ + + w + + + + + + + - +

+ V V

R. R. R. R. R.

540. R. phylloplana 541. R. pilati

O

o

+ + + + + + + + + + + + + + + + + + + + +

515. 516. 517. 518. 519.

auriculariae bacarum bogoriensis buffonii diffluens

(D O

1/3 1/3

+ + - + + + + - + + + - - + + + + - - +

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

V V

+ + + + + + + +

Summary of species

939

characteristics

Assimilation reactions and other characteristics

c c o o S3

^

S

^ Q 9 "g

D •p U O a^

(50 too (u

s ^ ^ I I I I I I .^ ^ ^ o > , <

S I O~ Pseudozyma 494. + + + 495. + V + 496. + -- + 497. + + + 498. +

{cont'd) + + + + + + + + + + + + + +

+ + + + +

Reniforma 499. Rhodosporidium 500. V + n + 501. + + 502. + + + 503. + + + w 504. + + + -

+ + X + + 505. - + + - X 506. - + - + + 507. + + + - w 508. + + V 509. + + + V W Rhodotorula 510. + + 511. + +w+ 512. - +w 513. w 514. + + V + 515. 516. 517. 518. 519. 520. 521. 522. 523. 524.

- +

+ + + -

+ + -

+ + - X X V + - V V -

- + + - + + + - + w + + + + + + + + + V + + - + + — w - + + - +

525. 526. 527. 528. 529.

H

530. 531. 532. 533. 534.

+ + + w - + + w + + w + + w w w w

535. 536. 537. 538. 539.

-

ffi Z

Z

> «N «A 00

n n n n n

+ + + + +

+ + + w +

+ + + + +

w+

V + - + + + W 4-

w + + w +

V + V +

V V + V + V -

+ + + - + + - + + - w - - + - + + 540. + + - + 541. - - + - -

+ -

J < &: P3 U U

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

-n -n -n -n -+

d o "S "S ( "^ S "S ' "^ S

^

o o

-+ -+ -+ -+ -- +

n n n n n

n n n n n

n n n n n

1o 1 i o ^n o n 1 oO

O O O

+ + + + +

n -n -n -+ + n n --

+ + + + +

n n n n n n n

n n n n -+n

n

+ + n -+n n -+n - + -- + n - w -- + n n + -- + + - + -- + n -+n -+n - + -- + n - + -- + V

+ + + + + --+ n n + n n + n n + n n +

+ + + + + +

n n n n n n n n n n

n n n n n n n n n n

+ n n n n

+ n + + n - + n - + n

+ + + +

n + -

w n n n n

n n n n

+ n n n n

n n n n n

n n n n n

H— n n n n n n n n

+

+ n n - n n + n n +

n n n n n

n n n n n

+ n n n n

n n n n n

n n n n n

n n n n

n n n n

+ n n n n n n n n n

n n n n n n n n n n

n n n n n n n n n n

n n n n n n n n n n

n n n n n n n n n n

n n n n n

n n n n n

n n n n n

n - w n + + n ^ n n

n n n n n

n n n n n

n n n n n

n n n n n

+ + + + +

n n n n n

+ n n n

n n n n

+

+ + n - - n V - + n + n - + n - - n - + n n - + n - + n +

n n n n

-

+ + + + + + + + - + + - + +

n n n + n n n n n n

53.9 53.7 64.6

n n n n

10 9 10 n 10 n n 10 n 10 10 10 n 9 n

n n n n n

n n n n n

+ + + + +

+ + + + +

+ + n n - n n

n n n n n

+ + + + +

+ + + + +

n n -

+ + + + + n n + n n +

+ + + + + + +

n n n n n

n n n n n

+ n n n n

n n n n n

n n n n n

V

-

+ V

n n n n

n n n n

n n n n

-

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n + n + + - + n + n - w- + n + - + n + n n

+

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n + n - + - + n + n + + n +

n n n n n

n n - + n + n n + n + n n n + n n -

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n + n - V - + n - + - + n + + - + + n

n n n n n

- + n + n n - + n - n n -

n n n n n n n n n n n n n n

n n + n

n n n n n

+ -

n n n n + n

n n n n

+ +

-n n --n + -n n -n n -n n -n

+ + + + + + + + + + + + + + +

+ -

n n n n n

-n n n + n -n + -n n n + + n n - n - n n n - n n - - n n n n - n n - n n - n n - n n n n

- n n n - n V n n

n n n n

- n n n V n + n n -

+ + + + +

------

+ + + + +

+ V

-

--

+ + + + + + + + + + + + + + +

n n n n n

+ + + -

53.3

+ +w w

+ n n n n

+ -

n n

62.0 50.5 65.1 64.6 60.7

+ w -

+ - + n n n n -

n 58.1

9 9 10 10 9

n n n n n

- + n + - + n + + + n n -

n n n n n

66.2 58.3 66.1 61.4 64.8

n n n n n

+ V -

n n n n n

Q P^ E^

10 10 10 n 10

n n n n n n n n n n

- + n - + n - + n + n -

n n + n

V V -

+ W

n n n n n

o o

-e o ^ ^ Si

X

n

^

+ - n X n n n

V X + V + V V + -

+ + + + +

1OZ

:§ -
-=: 3 .S c
U U O U m "'t r- o (N m

+ n n n

n n n n n n

10 10 n n n

n 57.1 54.4 52.4 57.3 50.8 60.5 66.1 56.0 56.6 63.4

n 63.9 68.5

n 46.9 48.3 55.6 59.0 57.3

10 10 10 n 10

50.8 60.6

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

-

+ + + + + + + + + + + + + + + + + + + +

+ + + -

+ + + n + 53.9 +

10 9 9 n 10

n n

+ + + + + + + + +

+ + n + n + 62.9 + n + n +

V V

+ + +

+ V V

_ -------------

Summary of species characteristics

940

Fermentation

Assimilation reactions and other characteristics

§^ O U 1> U O J

R a P 2 o ,S "2 o a c^ S J cii t^

Species Rhodotorula {cont'd) 542. R. pustula 543. R. sonckii Saccharomyces 544. S. barnettii 545. S. bayanus 546. S. castellii 547. S. cereuisiae 548. S. dairenensis

w o o o o -£ a =2 o O O J


.2 -S ^ U

+ V +

+ +

+ + +

+ - + -

+

V +

+ +

+ +

+ V + V -

+ -

+ V -

+ + -

+ +

+ +

+ + -

+ + + —

+

+ + V + + -

554. 555. 556. 557.

S. S. S. S.

servazzii spencerorum transvaalensis unisporus

+ + + +

malanga schoenii selenospora synnaedendra uini

Saitoella 569. S. complicata Saturnispora 570. S. ahearnii 571. S. dispora 572. S. saitoi 573. S. zaruensis

+ + + + +

+ +

+

+ - +

+ -

Sirobasidium 578. S. intermedium 579. S. magnum Sporidiobolus 580. S. johnsonii 581. S. pararoseus 582. S. ruineniae 583. S. salmonicolor

+

+ + + - + +

+

V

^ ^ "g, 3 13 S a pq O w bii O Q Q

- +

V V

+ -

+ +

+ + V

+ V

-

+ V

+ -

-

+ V

+ V

+ + + -

X X -

+

V V

V

+ -

+

+ - + + + V

+ -

+

V

+ -

V

+

+

V

+ + + V

V

-

+

-

+

+ +

V V -

+ + +

—

V V

V V H

X V

+ + + X -

+ +

+ + -

V -

+ +

V V -

V V

+ + V + -

+ +

+ + -

V V -

+

-

+

+ -

V +

V

+ +

V V

—

V

+

+

V

+ V -

+

X + -

V -

+ +

+ + + - + +

+ + V

V

+ + + + - +

+

V

+

+ - + +

—

+ —

V

+

V - n n -

+

V -

+

+ - + +

-

+ V

+

+ +

V V

+ + V V V

+ X X + + + +

—

-

+

+ + + V

- + - +

+ +

+ -

+

+ +

+ -

+ +

+

+ -

2 •"§ .-§

I § ^ 2^IJ

V

+

+ - +

+ + + +

+

+

+ + -

+

H

Q Q J Q

^ ^ "o

+ +

Schizoblastosporion 574. S. starkeyi-henricii Schizosaccharomyces 575. S. japonicus 576. S. octosporus 577. S. pombe

+ —

+ V V + - + -

X -

J

+

+ + + V - + -

+ +

00 Q

+

+ + -

5

,9 ^

2 2a ^ ^ < <; oji S O

+

+ + +

S. S. S. S. S.

Cci 2

+

+ + -

Wo

S ^ 2 o^

+ + - + —

exiguus kluyueri paradoxus pastorianus rosinii

564. 565. 566. 567. 568.

o .-S

+ V -

+ +

S. S. S. S. S.

Saccharomycopsis 559. S. capsularis 560. S. crataegensis 561. S. fermentans 562. S. fibuligera 563. S. jauanensis

2 rS

+ V + + - + -

+ + + —

549. 550. 551. 552. 553.

Saccharomycodes 558. S. ludwigii

o "^ ^ F

V -

V -

+ +

V

+

+ V V

+ +

—

+ V + + + + + + + + -

V + +

+ - + + - + + + + — +

+ V + + + + +

+

- V W

H

V V

+ + + + + + +

+

+ + + + V + +

+

+ V V + V V +

V V - V +

+

+ + + + - n + + + + - n

+ + + + + + + + + + + + + +

V + H

+ + - + - + +

-

W

V

+ + +

V

-

V -

+ + -

V -

+ V

+ V -

+ -

+ +

V V H

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

Summary of species characteristics

941

Assimilation reactions and other characteristics

1 (U o^

•S

(= a

^

C o

o

e

00 Q Q on U hS

sn o

I S 5 •? 1 I I Rhodotorula {cont'd) 542. - + + - + + 543. - - + - + — Saccharomyces 544. - - + + + 545. V - V V 546. - - + - V 547. V - V V V 548. - - V - + 549. 550. + 551. + 552. V 553.

- - - - + - V+ - VV

^ ^

-d S u -I 2 2 ^ 3

2 •r

564. - + + - + + — 565. - 566. - - V + + — 567. - - + + X V + 568. V V — V - Saitoella 569. n + n + + + Saturnispora 570. - - - + + 571. - - - V + 572. - - - + + 573. - - - + + Schizoblastosporion 574. - - V - + — Schizosaccharomyces 575. - - — 576. - 577. V - + Sirobasidium 578. + + + + + + + 579. + + + + + + + Sporidiobolus 580. + X + V + V 581. + + + V V V 582. - + + - V W 583. V V + + V

S <4

g .^ .^ .^fc^fc^I

ffi Z

Z

>
" '^

''^ (D

-S X) -S C3 U

S> C

2

u

•S

1 oz

o

J

-

n n n n n n n n n n n n n n

—

u .g

1P

n n n n

u u r- b CN en

a3 a^

"n1

S ^ fi

•^ 1 1 a g I '^ ^ 1^o X jj < £ m u u

- + n - n n - + n - + -

O

1— V -

^ d

JZI ^

d

CO Tit s "S X ^

1 111!

O O O O o o p

n n + H— n n n n + + - n n

n n n n n

n n n n n

n n n n n

n n n n n

- n n - n n n n n

n n n n

-

n n n n

n n n n - - n

+ - n n - n n n - n - - n

-

+ +

n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n

n n n n n

n n n n n

+ -

n n n n n

n + + n n n n

Vn n n -

n n n n n

-

V V + + V -

n n n n

n n n n

n n n n

n n n n

n n n n - n n - n n + n n - n n V n n n n n + n

n n + + n V- n + + n n -

n n n n

-

+ + + + + — + + + + + + + + -

—

-

+ a m 13 2 Q OH H

O p

n - + n n n n

+ V -

554. 555. - - + + + — 556. - - + 557. - - - - + — Saccharomycodes 558. - + - + - Saccharomycopsis 559. V V + - + V 560. - - + X X V 561. - 562. + + X X X V X + 563. - -

b o Cio (u Q Q ^

+ + V + + + V + + V V V

+ + + V -

+ + + + V + + + + V + + V

+ +

+ + + + V V -

n n

51.0 44.1

n 6 6 6 6

33.4 41.8 37.9 40.4 36.7

6 n n 6 n

35.5 41.9 42.6 41.1 n

n 6 6 6

36.6 34.8 33.5 35.6 38.3

n n n n n + n

-

-

n - + + n + n V n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

-

n - + + n n + n + n - X

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

X - n - - n - - n V - n - - n X - n - - n - - n - - n V - n

w X

+ V

V

n + n + n n n

n n n n n n n

n n

- n - +n

-

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n

- - - -

V

-

+ +

-

n n n n

n

- Vn n

n n n n

n n n n

-

-

n n n n

w + -

- n - - n

+ + + + +

+ + + + +

n n n n n

n n n n n

+ + + + +

+ + + + +

+ X

n

n -

-

+ n - - - - -

n - V + 34.1 + 30.2 — + 42.0 - V + n - + +

+ n n n n

n n + + + -

-

10

51.7

n n n n

n n n n

n 7 7 7

34.9 38.0 33.3 39.5

n n n n

n n n n

+ + + +

n n n n

-

- - ++

n n

+ + n n - + n n

n n n n n n n n n n n n n n

n n n n

- n ++n - n ++n

n n + + n n n + + n -

+ + - n + + + n n +

n n n n

n n n n

- +- + V - - - + V + - + - - - + -

n n n n

n n n n

+ n n n

n n n n

n n n n

n n n n

n n n n

n n n n

-

43.4 - V + 39.1 - + + + 37.0 39.3 - V + 31.3 +

n n n -

n n n n n n n n n n n n n n n

n n n n

- - n n n n n - - n n n n n - - n n n n n

n n n n n

- - n - n n n - - n- n n n - - n - n n n

+ + - - + - +

- n - n - n

n n n n

n n n n n

-

- - ++++ n n - - ++ - - ++n - n

n n n n

+ + + +

41.6

-

9 10

34.3 39.2 38.2

10 10 10 10

63.0 + + + 52.5 + + + 64.7 + w + 63.5 + + V

-

+ + V + n - n + n - n + V V n

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

Summary of species characteristics

942

Assimilation reactions and other characteristics

Fermentation

S^ o i> ^ u § §

S ^ 2 B 2 Si

0) O

« I o « u .2 J o

eg o

^H +i ^

43

U O

^ O

g Q «^ _L —.

.S -S ^ S o ^ °

_ -3 2

X) ^ >^ ^ 13 2 O WO W 5 O P Q

-5 13 &9 g a 'S 2 a O J c^ S U F

^ 13 ^ -S 3 -i X ^ S (2 S £ c^ Q

< < fti S O < tj

Sporobolomyces 584. iS. alborubescens 585. S. elongatus 586. S. falcatus 587. S. foliicola 588. S. gracilis

+ + + + +

+ + + +

589. 590. 591. 592. 593.

S. S. S. S. S.

griseoflavus inositophilus kluyveri-nielii lactophilus oryzicola

+ + + + +

-

594. 595. 596. 597. 598.

S. S. S. S. S.

phyllomatis roseus ruber salicinus sasicola

+ +

599. 600. 601. 602.

S. S. S. S.

singularis subbrunneus tsugae xanthus

+ + + +

Species

O O c^ S J c^ f^

+ - + - V + +

+ + + + + + - + + + + + + + + +

+ + + + + V V + - - + - - + + - + - + + + - + + + + + +

Sporopachydermia 603. S. cereana 604. S. lactatiuora 605. S. quercuum Stephanoascus 606. S. ciferrii 607. S. farinosus 608. S. smithiae Sterigmatomyces 609. S. elviae 610. S. halophilus Sterigmatosporidium 611. S. polymorphum Sympodiomyces 612. S. parvus

+ + + + + + - + + + + + w - - - + + + + + - w + - - - - + +

V

V V V

- - - - + - - + - - + + + + w - + + +

+ - + + - + + - +

W V -

V V -

V

- __

+ + + +

+

V V

- -

~~

+ + V +

+ + + + + +

V

w -

+ + + + +

+ w+ + + + +

+ + + + +

+ + + + + - + + + + + V + + + + V + + + V + + + +

620. T. washingtonensis

+

V

+

V V V V

+

V V V -

V V

+ - + X + X+ + - V V

+ + +

-

+ +

+ + +

V

-

- +

+

- - + - + + - - + + - - + - - - + - - + - - + V - V V - w+ + - — - - + - - - + + - + - - + +

-

+

+

- - + - + - - + w - + - -

•

~

_

~ V

_ +

V V V

+ + + +

-

+

~" ~

- + + - + - + - +

__V - - V + - w - -

V

V V V V

- - + + + - V + - + - V + - V

-

__

V V

-

-

n n w n - n - n

-

n n n n

n _ - n n + + + + + n V V V

V

+ + + V X +

- - -

+

n n n n n

V

+

_

+ +

+

n n n n n

-

- - - ~ ~~ __

+

V V

- + - - - - - + - + + + - + + + - + + + - + + V + V + - + - + + + - + + V V - V V - w- + - + - + + - - - w+ + - + - + - + + + - V - - - + -

+ + + + + - + - +

-

+ + + + + + ~ + + +

+ + + +

+ + + +

+

V

+ + + + + + +

V

+ + + + +

V

+ + + + + w + + + +

+ + + +

-

+ +

•

V V

~

+ + + + + + + V + V + + + + + + + + + V

V

-

+ + + + + + + X + + + V + +

+ + + + + +

+ w+ + + + +

+ VV+ + +

+ + - + +

+ - + + -

+ + + + + +

+ + + + +

+

-

+ +

+

+

V - + - - + + V + + - - - + - + - + + + - +

S

w + + + ww+

+ + - + + + + + V +

V

+

Q Q Jj Q ^

V

- + - +

+ + + +

+ + + + +

+

+

+ +

Tilletiaria 614. T. anomala Tilletiopsis 615. T. albescens 616. T. flava 617. T. fulvescens 618. T. minor 619. T. pallescens

-

+ + - + w + +

Sympodiomycopsis 613. S. paphiopedili

Torulaspora 621. T. delbrueckii 622. T. globosa 623. T. pretoriensis

+

- + - - - + - - - + - + -

V V

+ + + + + V + + + V - V + + + + + + + + + + - + +

-

J

-2 • S ^

I S3 I 2 •§ I I

V

- - - -

+ + - + + + + + + V

-

V V V

+ +

V

V

+

+ + + + +

+ + + + V

n + + + +

+ V- n + n + n + n -

V

+ + + -- + + - + -- + + + + -- + + V + -- + V + + -- +

V

+ +

+ +

V

V

V V

V V

+ +

+ + +

- V - - -

- - - -

n -

Tremella 624. T. aurantia Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

V

X V

V --

- V -- - --

+ + + + +

+ + + V

+ + V

Summary of species characteristics

943

Assimilation reactions and other characteristics

o o

C

i^9 o

B

(L>

e 'o 3 Q on 00 Q

+ + - + - +

'S

S 14 <4

Z

>
•^ .-§ ^ ^

ua

u o ^

•^ 1 g > -s

1 o11 1 < £

00

V V V

-

1 *3 O O 00

+ -

n n n n n

+ + + + -

- ++ -

n n n n n

+ + + + -

wn n n n V n n n n n n

+ + + + - w + w -

+ + - n

n n n n

+ n n + + n n + + - + n n n n + +

+ - - + - + + - - + V - + + + — + w -

- + - n + n + + - n + + - n

n n n n n n

+ n n n n + n + n n n n - n + n n n n + n

+ +

n - V - + + n n - n V n n n + + + + + n -

V

-

+ + + + +

+ V + + + +

599. - + + + + + 600. - - + + + + 601. V + + + + + 602. + — - + w Sporopachydermia 603. - + - V V - + + + - + 604. w V - + 605. Stephanoascus 606. V V + + V V + 607. V V - - V V 608. + + + - + + + Sterigmatomyces 609. - + + V + + 610. - + - - + + Sterigmatosporidium 611. + + + - + + + Sympodiomyces 612. - — - - - + Sympodiomycopsis 613. + - n w + - + Tilletiaria 614. - + Tilletiopsis 615. + V + + + + + + + + 616. 617. - - V V + + 618. V - V + + + 619. V V V V + V V 620. V V + + + + Torulaspora 621. V - V V V — 622. - - V + 623. + - V + - — Tremella 624. + + + + + V +

S

c (U c o

g

J "g u u u u u O ^ •Tj O


O "^

T^ U ^ ^ ^ ^ J=i o -i § 2 § 2 2 o d O O O O O

+ - + + + + + + + - + + + + n + + n

10 10 10 10 10

60.9 58.1 53.8 55.7 61.1

+ + + + +

n n n n n

+ + + -

n n n n n

+ + + + n + + + + n + - + +

10 10 10 10 10

47.4 52.2 50.0 51.1 56.9

+ n + + n + n + + n -

n n n n

w - + + + +

10 10 10 10

58.0 68.0 50.9 59.5

+ + + +

+ V +

+ +

- n - n - n -

+ + + + + + + + + + + + + + + +

9 9 9

49.6 46.2 + 37.8 +

+ + V n n + n n Vn n n n + n + n + + -

+ + + n n n n n n + - +

- - n - n n - - n

+ + + + + + n n n + + n + + + + +

9 9 9

46.6 - n + 49.2 - n + 47.0 - n +

n - + + n n - + + n

n n + n n n n n n + n n n n

n V + n

- +n - +n

+ + + + n + +

9 9

52.0 + 55.1 + + -

n - + + +

n n n n n n n

n

+ + + -

n n + + n - n

10

51.9

-

n n + n n n n

n n

n n + + - n n

9

46.3

n + n + n n n

n n n n n n n

n n n n

- wn

n n n + n - n

10

56.3

n - + + - n n

n n n n n n n

n n - n

- +n

n n + +

10

62.9 + - +

n n n n n

+ + + +

V

-

n n n n

10 10 10 10 10

56.7 63.2 67.1 56.0 43.7

+ + n

10

68.2 + + +

+

6 6 6

43.4 47.3 46.4

n

n

-

V

V -

n - n n

+ + + V n n n n + + + + - + n n + V - V n n + V + V n n

n + + n

n n

V

+ + - + + + + + + +

n

+ + + w- - V V V V -

V

+ + + + + + + +

V

-

V

n

- + - n - + - n + n - + - n n V V -

n

+

n

V

n

4- +

n V + n

n

+ + - n V V -

n

V V

V V -

n

+ V V V V V

V V -

n

V

n

+ +

V V

-

n n n n n - n n n n n n - n n n n n n - n

n n n +

+ n n

n n n n n n n

V +

-

n + + n + + n -

+ - + + - + + + + - +

+ + + + +

n n n n n

+ + + + + + + +

Q fc H

+ + +

n

n - + - n n

+ + + + +

+ + + + n + + + + n + + n + V

6 u

n n n n n

-

V -

a

+ + + + +

V

n n n n n

o g

63.0 56.5 53.1 56.0 50.9

-

+ + + + +

1o

10 10(H2) 10 10 10

+ - + n n + - + n n + - + n n + n n + n n

+ + + - + + - + + + w + -

U

1D a

+ n n n n + + - + n n + + - + n n n n

V

+ + + + +

CQ U

^^^^

n n n n n

+ - + - + + + w+ + +

594. - - + 595. V V V 596. + 597. - w 598. - w -

•r

1

«1 IT)

i 9 9 i^ 'S -2 -2

11

Sporobolomyces 584. - + + + + + 585. - + - - + 586. - + + - + + 587. - - + - w V + V 588. -

589. 590. 591. 592. V 593. +

c

C!

o o o o t> ;3 3

Q

c

V V

n n n n n

+ + + + +

+ n

+ + + n + n

+ + + + +

X -

n n n V

- n - n - n -

n n V n

+ + n

n n + +

n n n V

+ n V n

+ + + n + + + + n +

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

+ + V

n n n n

-

+

-

V

+

n

V

+ + + + +

+

+ + + +

n

+ + + + +

V

Summary of species

944

characteristics

Assimilation reactions and other characteristics

Fermentation

(U

^

Species

O «

g

0) o

o

g "5 o o o ^ "tS O O '^^

5 ai ^

Tremella {cont'd) 625. Z brasiliensis 626. Z cinnabarina 627. Z coalescens 628. Z encephala 629. T. foliacea 630. T. fuciformis 631. Z globispora 632. Z indecorata 633. Z mesenterica 634. Z! moriformis Trichosporon 635. Z! aquatile 636. Z a^<2/?/7 637. Z asteroides 638. Z brassicae 639. Z coremiiforme

-

0)
+ + + + +

+ + + V

+ +

+ + + + +

+ + + + + + + + + + + + - +- + - + +

+ + + + +

+ + + + +

+ - + + V V + V + + + + + V +

+ + + V + + - + + +

640. 641. 642. 643. 644.

Z cutaneum Z dulcitum T. faecale Z gracile Z m/:m

+ + + + + + + V

645. 646. 647. 648. 649.

T. jirouecii Z! laibachii Z loubieri Z moniliiforme Z montevideense

+ + + + +

650. Z mucoides 651. Z ovoides 652. Z pullulans 653. Z sporotrichoides Trichosporonoides 654. Z madida 655. Z megachiliensis 656. Z nigrescens 657. Z oedocephalis 658. Z spathulata Trigonopsis 659. Z variabilis Trimorphomyces 660. Z papilionaceus Tsuchiyaea

+ + + + + + + + +

+ + +

+ + + + - + + + + + V

-

n n n n n

V V

V V

+ + + + +

+ + + + +

+ + + + + + + + + + + + V V + + + + + +

+ + + + + + + + + + + + + V + + + + + V + + + + + - + + + + + + + + + + + V + + + V + V + + + + + + + + + +

+ + + + + + + V

- + - + - - + - +

+++

+ + + + +

+ + + + +

-


o ;e c g .s ^ ->. J

- + + + + + + + + + + + + - + + +

^ §Q

.s .s g g s ^ § o XI o » o 01 S ^ 13 *« 13 3 -I X -§ 2 re ^ -a J I ^ 2 o -ti

^ 13 c/5 3 =3 13 2 O O J c/3 2 U H

+ + + + V

(U

- s

S Oii S

HS

C/5 Q

J

Q Q J

+

V + + +

+ + + + +

+ + + + +

+ + + + + + + + + + - +- + + + +

+ + +

+ +

+ V V + - + +

+ + + + - - - + V V V + + - - + - + + + + +

- - - -

+

+

- -

+

V V

- + - + - V - - -

- - - - - ++ + + + + V + + - + + + - - ++ + + - V V + + V + - + -

+ + + + + - + + + - - + V

+ + + + + + + + + +

V

-

-

-

+ +

-

< < Dd 2 9 < "S Q ^

i l l

:S ^ B ;e 13 ^ a W O W Oi O

Q Q

+ + + + + + + + + + - + + + + V + V

+ + + + +

S

+ - + n + - + n n + + + n V + V n -

+ n + n + n - n + n

- o 2

-

+ + + + + +

V + - - + + + + + + + + + + V + + - + - + + + V + + - +

+ - + + V + + + + + - + V +

+ + V + + + V + + +

+ V + + V + + + + + - V V V +

+ + V + + + + + + + - V + V + -

+ + + + +

+ + + + +

+ + + +

+ + + +

+ + + + V + + V + + V + + - + + + + V V + + V V + - +

-

+

+

+ +

+

V V

V

- - - V V

+

+ V + + V + + + - - V - - V ++ + + + + + + + + + V + - V ++ + + + V + V - - + + + -

+ + + + + + + + + V - + + - + + - +- +

- +- - V - - - V - + - - ++

n n n n n

n n n n n

n n n n n

n -

+ + + + +

+ + + + + + + + + - ++ + + +

- - — V - V V V - V V - - ++ - V + V + + - + + - - V ++

+ + + + +

V

-

+ + + + + - V + + - + + + + + - + +

+ + +

V

V

-

+ + V V

+ + + + + + + + + + V + - - + + V + + - + + + - - - + n n + n n

+ + + + +

++

+ + + + +

-

-

+ + + + V

+ +

+ + +

V

+ + + + + +

++

+ ++ + + ++

+ + + +- ++

V + + + + n -

661. Z wingfieldii Ustilago

++++- w+

V + +

+ + + + V +

+ + + +- ++

662. L( maydis Wickerhamia 663. W. fluorescens Wickerhamiella

+-+++++

+-++-++

+ + + + + n

+ + + + ++

664. f^ domercqiae Williopsis 665. Pff californica 666. Pff mucosa

+++— +

+ +

+

V V + V + +

++- +

+ V V + V + + + + +

X +

+ +

+ + + +

+ V X +

Symbols: +, positive; - , negative; w, weak; x , positive or weak; v, variable (+/-, w/-); n, no data

Summary of species characteristics

945

Assimilation reactions and other characteristics

o o
3

0)

Q

c o

(U

2

o

1o U

ffi

625. - + - - + V 626. + + + + + + 627. - - - - + + 628. + + + V + + + 629. - - + V + + +

n n n n n

630. + + + + 631. + + + + 632. + + + + 633. - + + 634. + + + + Trichosporon ! 635. + + + + 636. + + + V 637. + V + + 638. - - + + 639. + + + +

+ + + + +

+ + + + + + w

n n n n n

+ + + + +

+ + V + + + + V +

n n n n n

640. + + + + 641. - V + + 642. + + + + 643. - + + + 644. + V + +

+ + + + +

+ + V + + + + + + +

n n n n n

+ + + + +

+ + + + +

n n n n n

'o O h3 o C on

Q

Q

00

B o 2 "S

o o 3

;S

(U 0

2 "5 '2 2

i9 9

2

S

1^ <^

o

rsi

lo

00

X

- - - - + - +

n n n n n

n n n n n

;^ 'A .^ ^ ^ >

.H 'H

0 C

0)

>

0)


•c '5

<^

5

Fi

CJ

r)

^

N "

^; m m ^ ^es >. "S ;) ^ ^ ^ X

X 0

u u u u ON

^

J3

0 ^

KJ

2 ^ < cu m U u

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

-

J w ^ 2 ^ D O

0

iri fS

cj

0

1^

cd

X

0

Cfl

rG

o

nil

a

-

0Q -^

S

Q a; H

0 0 0 0 0

0

Tremella {cont'd)

645. 646. 647. 648. 649.

+ + + + +

+ + + + +

+ + + + +

+ + + + +

650. 651. 652. 653.

+ + + + + + + + + V + + + + +

+ + + + +

+ + + + V + + + + + + +

Trichosporonoides 654. - - n - + + 655. - - n - V + 656. - - n - - 657. - - n - V V 658. - + n + + +

-

Trigonopsis 659. + + + Trimorphomyces 660. + + + + + + V Tsuchiyaea 661. - + + - V - + Ustilago 662. + + + + + - + Wickerhamia 663. ww + + Wickerhamiella 664. + - + w Williopsis 665. V X + + + V 666. + X V

-

-

- V V - - + - - + - - + - +

n n n n n

n n n n n

n n n n n

-

- V - - + - - - - V - V - V - V V -

+ + + + +

+ + + + +

n n n n n

- -

+ n + + n + + V n - - - n + + + n

n n n n n

+ + + + +

+ + + + +

+ + + + +

n n n n n

+ + + n + - + n + + + n V - V n - - + n

n n n n n

+ + + + +

+ + + + +

+ + + + +

n n n n n

+ + + V V + V + + + + + + V +

n n n n n

n n n n n

+ + + + + + -

+ + + +

+ + + +

n n n n

+ + + V - + + - + - + +

n n n n

n n n n n

n n n n n

+

n n n + + n - +

-

n n n n n

+ n n n n n n n + n n n - n n n + n n n

+ n V n + n + n + n

V

V

n n n n n

n n n n n

n n n n n

+ + V + + + + + + +

n n n n n

n n n n n

n n n n n

+ + + + +

+ + n - + + n V n + n - -

n n n n n

n n n n n

+ + + + +

n n n n

V V V V V

n n n n n

-

n n n n n

+ + V + + + + + + +

n n n n n

n n n n n

n n n n n

+ + + + +

+ + + + +

n -

-

n n n n n

n n n n n

+ + + + +

n n n n -

V V V V V

+ + + + +

+ + + + +

+ + + + +

+ w w w w

n n n n n

+ + + + +

n n n n n

+ + n + V n V V n + - n + + n

+ + + + +

-

9 9 9 9 9

62.6 58.2 61.7 54.4 59.3

+ + + + +

n n n n n

+ + + + +

+ + + + +

+ + + + + V + w

n n n n n

+ + + + +

n n n n n

V - n + + - n + + + n + + + n + + V n +

-

+ + n n - + + +

10 9 10 9 9

60.8 55.2 58.8 57.7 59.3

+ + + + +

n n n n n

+ + + + +

+ + + + +

+ + + + +

n n n n n

+ + + + +

n n n n n

+ V n + n + + n + n + + n + + + - n + n + - n + +

- n n + + - - -

10 9 9 10 9

61.4 57.3 56.7 58.5 55.2

+ + + + +

n n n n n

+ + + + +

n + n + n V n + +

+ - + - + -

+ + w w n + + + w - n + V V V w n + + + - - n +

n n n n

+ +

V

- - -

n + + + n n n n V n n V n + -

10 9 9 9

58.6 58.4 57.0 61.5

+ + + +

n n n n

+ + + +

n n n n n

n + n n n

n n n n n

n n n n n

n n n n n

+ + + + +

9 9 9 9 9

50.2 n 57.0 45.8 62.0

+ + + + +

n n n n n

V + V + +

n + n n n

n n n n n

n n + n n n n n n

V

V H—

n

n n n n n

n n n n n

+ n n + +

n

n

+ n n

n n n n n n n

n n - n V+ n

n - H— n

n n + n n n n

w - + n w+ n

n + + + + n

n n n n n n n

n n - n - + n

+

n n n n n + n

+ - n

+ n -

V V

- n - + -

+ + + + +

n n n -

+ n + +

+ + V - + n

n -

+ + n + +

+ + + +

n n

-

n n

46.1

+ + + + +

9

54.4

+ +

n n + + + + n

10

n

+ -

+ n + + n

9

37.6

+ +

n n n n n n n

n n n + - n

n n + + n

n

48.6

n n n n n n n n n n n n n n

n n n n v n n n V- n -

n n n + n - n n n n + n - n

7 7

43.0 34.0

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

-

V

- +

946

Summary of species characteristics

Fermentation

Assimilation reactions and other characteristics

•S w) O

Species Williopsis (cont'd) 667. W. pratensis 668. W. salicorniae W. saturnus 669. var. saturnus 670. var. mrakii 671. var. sargentensis 672. var. suaveolens 673. var. subsufficiens Xanthophyllomyces 674. X. dendrorhous Kjrwwifl 675. Y. lipolytica Zygi oascus 676. Z. hellenicus Zygosaccharomyces 677. Z. Z)«i7n 678. Z bisporus 679. Z. cidri 680. Z. fermentati 681. Z. florentinus 682. Z. mellis 683. Z. microellipsoides 684. Z. mrakii 685. Z. rouxii Zygozyma 686. Z. arxii 687. Z. oligophaga 688. Z. smithiae 689. Z. suomiensis

O O c^ S J

oi H

+ - w + + - +

+ - + + - + X X -

«

o S .-^

J

2

Pd 2

+ + - + + + + + X -

X +

+

+

+ + + +

V + V

+ + + - + + - +

-

X X

O

O

o x> o c

HS

C/3 Q

+ —

+ +

H

H

V X

+ + + — + + + — +

-

V +

+ + V

V V V -

-

V V -

+

V -

+ + + + + +

V V -

V

+

X

V -

+ + + +

+

V

V V -

+ +

+ + + + +

+ + - + + +

V V

- + + -

V -

V

+ V

V + - + V+ +

+ V - +

+ + + + + +

X V

+ V

V

V X -

+ +

+

-

V +

+

V

V V + + n

+

V

—

V V

-

+ + + V -

V + +

V -

-

-

+ + - + - V + + + +

-

+ + + +

+

+ X + + + +

V

+

W O P-l Oi O Q Q

+ + - X+

X

+ + V+ + + - +

"o 2 -c -7; -S (-1 (u a o o :S ^ b :S -3 ^ 9

+ - + - + + +

+ V + + + + + + V+ + + + + + - +

^

5

+ + + + +

+

+ + + + + + + +

I

o u

^ 2 re s ^ J ^ < < oj: 2 a < t5

V

V + + + + + + - + + + + + + - V+ + + + + - + +

Ki

.S .S ^ S S ^^ o

+ + + +

Symbols: +, positive; - , negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

+ + + + + +

+ + V -

X

+

+ - +

Summary of species characteristics

947

Assimilation reactions and other characteristics

c c o o

o GO Q

a

C/3

o

1

Q

Q

2

C/5

1o

U

Williopsis (cont'd) 667. + + + + + + 668. 669. V V + + + V -

670. - + + + + - 671. - + - + + - 672. - + + + + 673. - + X + + Xanthophyllomyces 674. V + + V + Yarrowia 675. - V V + + Zygoascus 676. V + + V V Zygosaccharomyces 677. 678. - - V 679. + - - + + 680. + V V + + 681. + - V - + 682. - 683. - 684. 685. - Zygozyma 686. - + 687. - 688. - + 689. - +

X -

;S o

1

3 (u "g _o 2 1 2 IZ >.^(N^«r^ ^ X ^1

X

- + n - + + - n

n n n n n n n n n n n n n n

- + n + - + n + n - + n + - + n

n n n n n

i 9 9

J3

GT)

1 < •J

n n n n n

<

n n n n n

DH

n n n n n

PQ

n n n n n

U U

n n n n n

n n n n n

V -

w n + n n w -

+ -

n n n n n n n

V +

+ V+

n n n n n

" "O^

n n n n n

n n n n n

-

-

n n n n n

S^ I 2 I I 2

d d O O O OO

^,

a

o U

u +

^o S

n n n + n n n n + n

-

n n

n n

39.9 36.7

- w

V

n n n n n

V

n n n n n

7 7 n n 7

44.4 44.3 44.1 44.6 43.6

-

10

48.3 + +

V

V

n n n n n

n n n n n

+ + + + +

n n n n n

V

-

n n + + + V n

49.9 43.9

+ + + n

n

+ + + + + + n

n n n n n n n n n

n n n n n n n n n

H— + + H—

n n n n n + - n n + - n H— n

-

n n + + +

+ + +

+ + + + +

+ + + + +

n V n n n + + n n

6 6 6 6 6

44.4 45.3 43.6 44.2 43.0

n n + n

+ -

+ + + +

+ + + +

n n n - n V n

6 6 6 6

41.4 41.4 42.2 41.7

n n n n

n n n n

n n n n

n n n n

+ + + +

+ + + +

+ + + +

+ + + +

9 8 9 8

47.4 41.7 55.5 45.1

-

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

-

n n n n

-

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

n n n n n

+ + + +

n n n n

m m Q

-

+ -

-

n n n n

^

. o ^ -S :S ^ -S :S

+ V

n - n - + n + + n - -

n V +

oil

n n n - - n n n n - - n

-

n - + n - +

S O

G

J w «n ^ c/3 p a

-

-

- - + + - + - - + + +

-T 6

n n n n n n n n n

n - V

V + + V - + V

1^

g

"S

•>< u u u u u

Symbols: +, positive; -, negative; w, weak; x, positive or weak; v, variable (+/-, w/-); n, no data

+ + + + +

- V

This Page Intentionally Left Blank

Glossary of terms used in this book basidiocarp: the teleomorphic reproductive structure of a basidiomycete basidiophore: basidium-bearing hypha basidiospore: a spore produced by a basidium basidium: organ of the teleomorphic (sexual) state of a basidiomycete that produces basidiospores basipetal: produced successively in the direction of the base; the apical part is oldest biallelic incompatibility: two alleles per mating locus, for example, A\ and A2 or a and a, ascomycetes and basidiomycetes bifactorial mating system: see tetrapolar incompatibility system bilaterally symmetrical: with one plane of symmetry bipolar incompatibility (unifactorial): a system with a single incompatibility locus; bipolar, because of the two incompatibility groups found among the progeny of a cross; may be biallelic or multiallelic bisexual: two opposite mating types in the genome of a single cell, a heterothallic diploid blastese: non-septate cells that resemble true mycelium, found in the genera Brettanomyces and Dekkera blastoconidium: a vegetative spore formed by enlargement of the bud initial that precedes septal formation blastospore: see blastoconidium botuliform: cylindrical with rounded ends bud: formation of a new cell from an outgrowth on the parent cell on a broad or narrow base budding: monopolar: forming buds at only one pole of the cell, usually on a broad base bipolar, forming buds at both poles of the cell, usually on a broad base polar: forming buds at one or both poles of the cell, usually on a narrow base or on a denticle multipolar (multilateral): forming buds, usually on a narrow base, over nearly the entire surface of the cell bud-fission: bud formation on a broad base with crosswall development at the constriction between bud and parent cell; typical yeasts with bipolar budding are Nadsonia, Saccharomycodes, Hanseniaspora (Kloeckera) and Wickerhamia buUate: spores with a rounded projection

abstricted: formation of spores by the cutting off of successive portions of the sporophore through growth of the septa acerose: needle-shaped acicular: needle-shaped, see acerose acropetal: produced successively in the direction of the apex; the apical part is youngest aerobic: free oxygen is required for growth; an atmosphere with free oxygen agglutinate: clump or bind together allantoid: curved with rounded ends, sausage-shaped allele: any of the alternative expressions of a gene allotype: paratype of the opposite sex to the holotype amphigenous hymenium: spore layer of fruit body formed on two sides amphidiploidy (allopolyploidy): production of a fertile species by the fusion of the genomes of two separate but usually related species with different chromosome numbers; the new species is reproductively isolated from the parent species ampuUiform: flask-like form; shaped like a Florence flask anamorph (anamorphic state): asexual part of life cycle, mitotic state anastomosis: fusion between hyphae annellation: formation of ring-like protrusions near the apex of a cell resulting from successive formation of conidia at the same site annellidic: having annellations apex: end of a cell farthest from base or point of attachment apical: referring to apex apiculate: cell with a short projection (apiculum) at one or both ends of a cell arthroconidium (arthrospore): an asexual spore resulting from the division of a hypha or a single cell by fission, for example, Trichosporon ascophore: ascus-bearing hypha ascus: the sac-like cell in which ascospores are produced autogamy: fusion of nuclei within a cell in the absence of cell fusion axenic culture: a pure culture of a single organism ballistoconidium: an asexual ballistospore ballistospore: spore that is forcibly projected from a basidium base composition of DNA: molar ratio of guanine + cytosine (G+C) or adenine + thymine (A+T) expressed as the percent that the particular base pair comprises of a DNA molecule

capitate: with a spherical tip capsule: a hyaline sheath of polysaccharide surrounding the yeast cell catenulate: in a chain cerebriform: brain-like appearance 949

950

Glossary of terms used in this book

chlamydospore: a thick-walled, intercalary or terminal asexual spore clamp connection: a hyphal outgrowth formed during cell division of dikaryotic hyphae in basidiomycetes that makes a connection between the two cells by anastomosis. The function is to separate dividing nuclei during cell division; one of the daughter nuclei passes through the clamp. clavate: club-shaped, broadest at the apex clone: the asexual offspring from a single cell closure line: the site in the center of the septum where, during growth, the septum has closed; there is a double layer of plasmalemma visible in a longitudinal section through the center of the hypha coenzyme Q number: the number of isoprene units in the side chain of coenzyme Q (ubiquinone) collarette: cup-shaped structure found at the apex of certain conidiogenous cells such as on the conidiophore of Phialophora or after successive budding at the same site on the cells of certain yeasts compatible mating types: see complementary mating types complementary mating types: strains (mating types) capable of mating to initiate a fertile dikaryotic or diploid state congeneric: belonging to the same genus conidiophore: a specialized hypha on which conidia are produced conidium (conidiospore): an anamorphic spore conjugated ascus: ascus developed from the fiasion of two cells conjugation: ftision of two cells during the mating process conspecific: belonging to the same species coralloid: made up of erect, branched or unbranched structures, coral-like coremium: a fascicle of conidiophores; synnema cornute: homed, horn-shaped crescentiform: see lunate crescent-shaped: see lunate crispulate: with a wavy margin cross: to bring together genetic material from different individuals cross wall: see septum cupulate: cup-shaped cystidium: a sterile cell situated among the basidia and usually projecting beyond them in the hymenium in basidiomycetes dacryoid: teardrop, tear-shaped; one end rounded and the other more or less pointed dactyloid: finger-like dangeardien: a structure (asci or basidia) in which karyogamy and meiosis take place degree Balling: the gravity of wort that indicates sugar content by weight. The measurement is made

with a saccharometer graduated with a scale that was constructed in 1843 by Carl Joseph Napoleon Balling. Degree Balling is similar to degree Brix, except that Brix was determined at 15°C whereas Balling was determined at 17.5°C. A saccharometer is a hydrometer consisting of a long graduated stem attached to an elongated bulb, which is weighted at the bottom. The hydrometer is placed in the wort and the gravity can be read on the graduated stem; the lower the content of sugar the deeper the meter sinks into the liquid. dehiscent, dehiscing: opening when mature by pores or by becoming broken in parts deliquescent ascus: see evanescent ascus dentate: with tooth-like projections denticle: a small tooth-like projection diclavate: club-shaped at both ends dikaryon: cells containing two genetically distinct nuclei dikaryotic: see dikaryon dimorphic: having two forms, e.g., budding cells and hyphae diobovate: ovate at both ends with a central narrowing diplo-haplontic life cycle: the cells reproducing vegetatively may be haploid or diploid, e.g., Saccharomyces cerevisiae diploid: nucleus with a double set (2n) of chromosomes diplontic life cycle: the vegetative cells are diploid, e.g., Saccharomycodes ludwigii diplophase: the part of the life cycle in which the cells are diploid distal: terminal, away from the point of origin DNA: deoxyribonucleic acid DNA reassociation: the pairing or reannealing of complementary single strands of DNA to form a double-stranded molecule (duplex) DNA sequence homology: the extent of homology or relatedness between the sequences of nucleotides on complementary DNA molecules DNA sequence relatedness: see DNA sequence homology dolipore/parenthesome septum: a septal pore complex in the basidiomycetes in which the pore margin is enlarged into a barrel-like morphology (dolipore) and the paraseptal cytoplasm on either side is delimited by endoplasmic-reticulum-derived membrane domes (parenthesomes) dormant: in state of rest echinulate: with more or less pointed projections effuse: growing flat ellipsoidal: elliptical in optical section ellipsoidopedunculate: stalk-like and ellipsoidal endospore: an anamorphic spore formed within a vegetative cell or with a basidium enteroblastic: involvement of the inner part of the cell wall of the parent cell in the formation of the bud epibasidium: a structure located between a probasidium and basidiospores

Glossary of terms used in this book

epithet: the second (specific) part of a Latin binomial erose: having dehcate tooth-Uke projections from the edge evanescent ascus: an ascus that breaks down when mature and Uberates the ascospores exosporium: the outer layer of the spore wall falcate: sickle-shaped farinose: with a powdery appearance fascicle: bundle fasciculate: growth in fascicles filament (filamentous): thread-like hyphal or pseudohyphal cell fimbriate: with a torn or minutely fringed margin foliaceous: with a leaf-like appearance fusiform: spindle-like fusoid: spindle-like G + C content: mol percent guanine + cytosine (G+C) of DNA; see also base composition of DNA galeate: hat-shaped gametangiogamy: fusion of gametangia gametangium: gamete producing cell; alternatively, when gametes are not formed, copulation or conjugation of gametangia occurs gelatinous: jelly-like genotype: the genetic constitution of an individual taxon or cell glabrous: smooth, not hairy or roughened haploid: having a single set (n) of chromosomes haplontic life cycle: the vegetative cells are haploid haustorium : a special hyphal branch, some portion of which penetrates a host cell and absorbs nutrients heterogamous conjugation: conjugation of two cells of different form or size heterothallic: sexual reproduction requires the interaction of different mating types hirsute: having long hairs holoblastic: involvement of the entire cell wall of the parent cell in the formation of the bud holometabasidium: non-septate metabasidium holomorph: all stages of a fungus comprising the teleomorph and anamorph holotype: material or strain indicated as nomenclatural type by the original author homokaryon: a strain in which all nuclei are of the same genotype homokaryotic fruiting: formation of a basidiomycete "teleomorph" in the absence of a dikaryophase; the mycelial cells are uninucleate and lack clamp connections homonym: the same name given to two or more different taxa of the same rank based on different nomenclatural types homothallic: sexual reproduction without the preceding interaction of complementary mating types

951

hyaline: transparent or colorless hybrid: progeny of a cross involving genetically different parents hymenium: spore bearing layer of an ascomycete or basidiomycete fruit body hypha: one of the filaments of a mycelium ICBM: International Code of Botanical Nomenclature imperfect state: see anamorph incompatibility: inability of two sexual strains to sexually reproduce intercalary cell: a cell between two other cells interfertility: mating of two organisms with production of fertile offspring intramatrical : living in the matrix or substratum isogamous: conjugating cells of the same shape and size isotype: a duplicate of the holotype from the same, single collection as the holotype karyogamy: the fusion of the two sex nuclei after plasmogamy lateral: at the side lectotype: a specimen designated as the nomenclatural type when no holotype was indicated at the time of publication, if the holotype is missing, or if the holotype is found to belong to more than one taxon lenticular: shape of a double convex lens life cycle: series of stages or events between the zygote of one generation and the subsequent zygote of the next generation lobate: lobed lobiform: in the shape of a lobe locus: the site of a gene on a chromosome lunate: like a crescent moon lyophilization: a method of preserving viable, metabolically inactive cultures by freeze drying mating: fusion of two cells that are sexually reactive mating types: cells of opposite types, which are able to conjugate meiosis: reduction division associated with sexual reproduction meiosis bud: a bud attached to the parent cell which serves as the site of meiosis after fiision of the bud and parent cell nuclei mesophilic: optimum temperature of growth is 20-40°C metabasidium: the part of the basidium in which meiosis occurs micropore: narrow pore-like structure in a septum mitosis: nuclear division with retention of the original number of chromosomes in each daughter nucleus multiallelic incompatibility: more than two alleles per incompatibility locus; more than two alleles for control of a particular function, for example, Ai,A2,A2 and Ai Bi, A2 B2, basidiomycetes

952

Glossary of terms used in this book

mycelium: a mass of hyphae of an individual fungus; see also true- and pseudomycelium neotype: strain or material designated as type when the material or strain on which the original description was based no longer exists new combination, combinatio novo, comb, nov.: name of a taxon, which has been transferred in rank or position such as from one genus to another; term used by authors when new combination is made nomen conservandum, nom. cons.: conservation of the name of a genus or species, although technically not acceptable, which has been approved by an International Botanical Congress nomen invalidum, nom. inval. invalid name: a name, which has not been validly published, i.e., in accordance with the ICBN nomen nudum, nom. nud.: a name published without an adequate description or diagnosis, i.e., in accordance with the ICBN nuclear segregation: the segregation of genetically different nuclei contained in a heterokaryotic multikaryon numerical analysis, numerical taxonomy: taxonomic arrangement based upon quantitation of phenotypic similarities and differences obclavate: club-shaped with the broadest part at the base oblate: flattened at the poles oblong: twice as long as wide and having somewhat truncate ends obovate: inversely ovate, narrowest at the base obovoid: see obovate obpyriform: pear-shaped but attached at the broad end obtuse: rounded or blunt ogival: pointed like a Gothic arch orbicular: spherical osmophilic: able to grow in a medium with elevated, i.e., greater than usual, sugar- or salt concentration osmotic medium: medium with elevated sugar or salt concentration osmotolerance: resistance to osmotic pressure ovoid: egg-like, i.e., with narrowest end near tip paraphysis: sterile filaments in the hymenium of ascomycetes and basidiomycetes; in the latter they are dikaryotic and allied to basidia, cystidia or hyphae parasexuality: recombination of hereditary properties based not on sexual reproduction (meiosis) but on mitotic non-disjunction paratype: strain other than the holotype on which the original description of a species is based parenthesome: in basidiomycetes a curved, double membrane-derived structure differentiated from the endoplasmic reticulum that occurs on either side of the septal dolipore pedicel: a small stalk-like structure

peduncle: stalk perfect state: see teleomorph persistent ascus: ascus not deliquescing (dissolving) at maturity phenotype: the totality of characteristics of an individual as a result of the interaction between expressed genotype and environment phragmometabasidium: a metabasidium divided by septa pileus: the cap or hymenium-supporting part of the complex basidiomata or ascomata, e.g., agarics or morels plasmodesmata: isthmus-like strands of protoplasm connecting adjacent cells; in hyphal septa also designated as micropores plasmogamy: fiision of the cytoplasm of two compatible cells plicate: folded into pleats probasidium: the morphological part or developmental stage of the basidium in which karyogamy occurs promycelium: see metabasidium protosterigma: basal, filamentous or inflated part of the sterigma prototrophic: growth factor-independent pseudohyphae: see pseudomycelium pseudomycelium: a linear arrangement of budding cells that remain attached to each other psychrophilic: optimum temperature for growth is below 20°C pulcherrima cells: round cells containing a large oil drop as with Metschnikowia (Candida) pulcherrima pulcherrimin: a red iron-containing compound produced by some strains of Metschnikowia, Kluyveromyces, and certain other yeasts pulvinate: cushion-like pyriform: pear-shaped reannealing experiments: see DNA reassociation reniform: kidney-like shape reticulate: net-like rotational symmetry: with all planes of symmetry through the length axis rugose: wrinkled saccate: like a sack or bag Saturn-shaped: spherical with a ledge around the middle, i.e., like the planet Saturn self-fertile: see homothallic septum: a cross wall in a hypha sessile: lacking a stem or stalk seta: a stiff hair or bristle sib mating: mating or crossing of siblings simple pore: central pore with the septum tapering somatogamous conjugation: fiision of two whole cells sphaeropedunculate (capitate): spheroidal end on an elongated cell

Glossary of terms used in this book

sporidium: see basidiospore sporophore: a spore-producing or supporting structure stalagmoid: like a long tear or drop stemonitoid: with capitate synnema sterigma: an extension (process) of a cell that supports a basidiospore sterigmate: originating on sterigma stilbelloid: with coremia stipitate capitate: see sphaeropedunculate, but stipe may be long sympodial proliferation: see sympodium sympodium: a conidiophore that extends in growth by a succession of apices; a spore is produced at each apex and the growth continues to the side of the apex; the result is a zigzag appearance syngamy: fusion of sexual cells resulting in karyogamy and zygote formation synnema: see coremium teleomorph, teleomorphic state: the state of the life cycle in which asco- or basidiospores are formed after nuclear fusion; meiotic state teliospore: a thick-walled spore, which is a probasidium tetrapolar incompatibility system (bifactorial mating system): a system with two incompatibility loci, A and B, which control mating competence; tetrapolar, because of the four incompatibility groups found among the progeny of a cross, usually multiallelic basidiomycetes tremelloid: gelatinous, jelly-like tremelloid basidium: cruciately septate phragmobasidium, i.e., having longitudinal and/or oblique septa true hyphae: see true mycelium true mycelium: a body of hyphal cells with apical growth and usually, cross walls truncate: ending abruptly as though the end was cut off

953

tubercle: small wart-like structure; tuberculate with tubercles turbinate: top-like in form type material: specimen material on which the name of a taxonomic group, i.e., a species is based; may be dried herbarium material or a viable, metabolically inactive culture preserved by lyophilization or liquid nitrogen freezing type species: the species which was designated as the nomenclatural type of a genus type strain: the preserved, original specimen designated as the nomenclatural type unifactorial mating system: see bipolar incompatibility system unisexual: vegetative cells of a single mating type velvety: having a velutinous appearance, i.e., densely covered with fine hairs ventricose: swelling out in the middle or at one side; inflated verrucose: having small rounded processes or warts verticil: whorl vesicle: a bladder-like sac, cell or cavity; a thin-walled body vesiculate: with many vesicles wale-like: ascospore ornamentation comprised of short ridges, which may be irregularly placed Woronin bodies: membrane bound refractive spherical bodies occurring on either side of the pore of an ascomycete septum zygote: a diploid cell that is the result of the fusion of two sexual cells or nuclei

This Page Intentionally Left Blank

References Abadie, F. 1961. Interet systematique de la recherche de I'urease chez les levures et organismes. C.R. Acad. Sci. 252, 2122-2124. Abadie, F. 1967. L'urease chez les levures. Ann. Inst. Pasteur 113, 7 9 1 813. Abadie, F , M.C. Pignal and J.L. Jacob. 1963. Les levures a spores verruqueuses. Bull. Soc. Mycol. France 79, 16-70. Abe, K., and T. Sasakuma. 1986. Identification of a diploid selfsporulating cycle in the basidiomycetous yeast Rhodosporidium toruloides. Can. J. Microbiol. 132, 1459-1465. Abe, K., E. Tsuchiya, I. Kusaka, S. Fukui and A. Kusanagi. 1977. Nuclear behavior of Rhodosporidium toruloides, a heterobasidiomycetous yeast. J. Gen. Appl. Microbiol. 23, 175-181. Abe, K., S. Fukui and A. Kusanagi. 1984. Estimation of time length of cell-cycle phases from asynchronous cultures of the basidiomycetous yeast Rhodosporidium toruloides. J. Gen. Appl. Microbiol. 30, 2 5 7 265. Abou-Gabal, M., C.B. Chastain and R.M. Hongle. 1979. Pityrosporum (pachydermatis) canis as a major cause of otitis externa in dogs. Mykosen 22, 192-199. Achenbach-Richter, L., R. Gupta, W. Zillig and C.R. Woese. 1988. Rooting the archaebacterial tree: the pivotal role of Thermococcus celer in archaebacterial evolution. Syst. Appl. Microbiol. 10, 2 3 1 240. Aciole de Queiroz, L. 1970. Pichia faecalis nov. comb. Revision de una cepa de levadura nombrada Kloeckera faecalis Batista & Silveira, 1959. Mycopathol. Mycol. Appl. 41, 327-329. Aciole de Queiroz, L. 1973. Endomycopsis monteuidensis n. sp. Mycopath. Mycol. Appl. 51, 307-314. Acton, H.W. 1919. Mycotic infections of the throat due to the Endomyces tropicalis. Indian J. Med. Res. 6, 591-600. Acton, H.W., and G. Panja. 1927. Seborrhoeic dermatitis or pityriasis capitis: a lesion caused by the Malassezia ovale. Ind. Med. Gaz. 62, 603-614. Adams, A.M. 1949. A convenient method of obtaining ascospores from baker's yeast. Can. J. Res. Sect. C 27, 179-189. Adams, A.M., and J.R. Pringle. 1984. Relationship of actin and tubulin distribution to bud growth in wild-type and morphogenetic-mutant Saccharomyces cerevisiae. J. Cell Biol. 98, 934-945. Adnan, S., N. Li, H. Miura, Y. Hashimoto, H. Yamamoto and T. Ezaki. 1993. Covalently immobilized DNA plate for luminometric DNADNA hybridization to identify viridans streptococci in under 2 hours. FEMS Microbiol. Lett. 106, 139-142. Adrio, J.L., M. Lopez, J. Casqueiro, C. Fernandez and M. Veiga. 1995. Electrophoretic karyotype of the astaxanthin-producing yeast Phaffia rhodozyma. Curr. Genet. 27, 4 4 7 ^ 5 0 . Aheam, D.G. 1988. Candidiasis. In: A. Ballows (Ed.), The Laboratory Diagnosis of Infectious Disease: Principles and Practice. Springer, New York, pp. 583-588. Ahearn, D.G., and J.B. Lawrence. 1984. Disseminated candidiasis caused by a sucrose-negative variant of Candida tropicalis. J. Clin. Microbiol. 20, 187-190. Aheam, D.G., and M.S. McGlohn. 1984. In vitro susceptibilities of sucrose-negative Candida tropicalis, Candida lusitaniae, and Candida norvegensis to Amphotericin B, 5-fluorocytosine, miconazole, and ketoconazole. J. Clin. Microbiol. 19, 412-416. Aheam, D.G., and F.J. Roth. 1966. Physiology and ecology of psychrotrophic carotenogenic yeasts. Dev. Ind. Microbiol. 7, 301-309. Aheam, D.G., and R.L. Schlitzer. 1984. Key to yeasts pathogenic for man 955

and animals. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 998-1005. Ahearn, D.G., FJ. Roth, J.W. Fell and S.P Meyers. 1960. Use of shaken cultures in the assimilation test for yeast identification. J. Bacteriol. 79, 369-371. Aheam, D.G., J.R. Jannach and F.J. Roth. 1966. Speciation and densities of yeasts in human urine specimens. Sabouraudia 5, 110-119. Aheam, D.G., D. Yarrow and S.P. Meyers. 1970. Pichia spartinae sp. n. from Louisiana marshland habitats. Antonie van Leeuwenhoek 36, 503-508. Aheam, D.G., S.A. Meyer, G. Mitchell, M.A. Nicholson and A.I. Ibrahim. 1977. Sucrose-negative variants of Candida tropicalis. J. Clin. Microbiol. 5, 494-^96. Ahmad, M.S. 1973. Some growth properties of haploid and diploid strains of Protomyces inundatus. Pak. J. Bot. 5, 33-43. Ainsworth, G.C. 1971. Ainsworth & Bisby's Dictionary of the Fungi. 6th edn.. Commonwealth Mycological Institute, Kew. Ainsworth, G.C. 1973. Introduction and keys to higher taxa. In: G.C. Ainsworth, FK. Sparrow and A.S. Sussman (Eds.), The Fungi. Academic Press, New York, pp. 1-7. Akagi, S. 1929. Uber eine neue mykotische Hautkrankheit "Trichosporiacutis psoriatiformis progressiva Asahi et Akagi". Japan. J. Dermatol. Urol. 29, 53-55, 733-774. Al-Aidroos, K., and H. Bussey. 1978. Chromosomal mutants of Saccharomyces cerevisiae affecting the cell wall binding site for killer factor. Can. J. Microbiol. 24, 228-237. Alexopoulos, C.J., and C.W. Mims. 1979. Introductory Mycology, 3rd edn. Wiley, New York. Algeri, A., F Tassi, I. Ferrero and P.P. Puglisi. 1978. Different phenotypes for the lactose utilization system in Kluyveromyces and Saccharomyces species. Antonie van Leeuwenhoek 44, 177-182. Allen, L.A., and B.D. Thornley. 1929. The morphology and physiology of two lactose-fermenting yeasts and chemical changes during the ripening of cheese from milk containing them. Ann. Appl. Biol. 16, 578-595. Allen, T.L., and M.G. Douglas. 1990. Organization of the nuclear pore complex in Saccharomyces cerevisiae. J. Ultrastruct. & Mol. Stmct. Res. 102, 95-108. Amano, Y, S. Goto and M. Kagami. 1975. A strongly ethanolassimilating new yeast Candida brassicae nov. sp. J. Ferment. Technol. 53,311-314. An, G.-H., D.B. Schuman and E.A. Johnson. 1989. Isolation oi Phaffia rhodozyma mutants with increased astaxanthin content. Appl. Environ. Microbiol. 55, 116-124. An, G.-H., J. Bielich, R. Auerbach and E.A. Johnson. 1991. Isolation and characterization of carotenoid hyperproducing mutants of yeast by flow cytometry and cell sorting. Bio/Technology 9, 70-73. Anderson, H.W. 1917. Yeast-like fungi of the human intestinal tract. J. Infect. Dis. 21, 341-385. Anderson, H.W. 1918. The influence of illumination gas and its constituents on certain bacteria and fungi. Am. J. Bot. 5, 1-31. Anderson, J.A., and D.R. Soil. 1986. Differences in actin localization during bud and hypha formation in the yeast Candida albicans. J. Gen. Microbiol. 132, 2035-2047. Anderson, K.W., and C.E. Skinner. 1947. Yeasts in decomposing fleshy fungi. Mycologia 39, 165-170. Anderson, P.J., K. McNeil and K. Watson. 1986. High-eflficiency carbohydrate fermentation to ethanol at temperatures above 40°C by

956

References

Kluyueromyces marxianus var. marxianus isolated from sugar mills. Appl. Env. Microbiol. 51, 1314-1320. Andrewes, A.G., H.J. Phaff and M.P. Starr. 1976. Carotenoids ofPhaffia rhodozyma, a red-pigmented fermenting yeast. Phytochemistry 15, 1003-1007. Andrews, J.H. 1993. Comparative ecology of microorganisms and macroorganisms. Springer, New York, 302pp. Andrews, R.K., R.L. Blakeley and B. Zemer. 1984. Urea and urease. In: G.L. Eichhom and L.G. Marzilli (Eds.), Advances in Inorganic Biochemistry, Vol. 6. Elsevier, New York, pp. 245-253. Anonymous. 1994. Pigment from a natural yeast. Fish Farmer, JanuaryFebruary, 32-33. Aoki, T., K. Tubaki and R.J. Bandoni. 1986. On two unreported species of Platygloea from Japan. Trans. Mycol. Soc. Japan 27, 371-385. Amaud, G. 1913. Sur le genre Eremothecium Borzi. Bull. Trim. Soc. Mycol. Fr. 29, 572-576. Arnold, P., and D.G. Aheam. 1972. The systematics of the genus Prototheca with a description of a new species Pfilamenta. Mycologia 64, 265-275. Artagaveytia-Allende, R.C., and L. Aciole de Queiroz. 1970. Cryptococcus diffluens var. uruguaiensis Allende et Aciole de Queiroz. Inst. Micol. Univ. Fed. Pemambuco, Publ. 663, pp. 1-9. Asai, T. 1918. Physiologische Untersuchungen uber eine neue, in der Gerbbriihe gedeihende Kahmhefe. J. Coll. Sci. Imp. Univ. Tokyo 39, 1^2. Asai, Y, N. Makiguichi, M. Shimada and Y Kurimura. 1976. New species of methanol-assimilating yeasts. J. Gen. Appl. Microbiol. 22, 197-202. Aschner, M., J. Mager and J. Leibowitz. 1945. Production of extracellular starch in cultures of capsulated yeasts. Nature 156, 295. Ashby, S.F., and W. Nowell. 1926. The fungi of stigmatomycosis. Ann. Bot. 40, 69-84. Ashford, B.K. 1917. The etiology of sprue. Am. J. Med. Sci. 154, 157176. Ashford, B.K. 1928. Certain conditions of the gastro-intestinal tract in Porto Rico and their relation to tropical sprue. Am. J. Trop. Med. 8, 507-538. Ashford, B.K., and R. Ciferri. 1930. A new species of Torulopsis: Torulopsis nitrophila Cif and Ashf Zentralbl. Bakteriol. Parasitenkd., Abt. II, 81, 63-67. Ashford, B.K., R. Ciferri and L.M. Dalmau. 1930. A new species of Prototheca and a variety of the same isolated from the human intestine. Arch. Protistenkd. 70, 619-638. Ashida, S., T. Shimazaki, K. Kitano and S. Hara. 1983. New killer toxin of Hansenula mrakii. Agric. Biol. Chem. 47, 2953-2955. Ashton, M.L., and P.B. Moens. 1979. Ultrastructure of sporulation in the hemiascomycetes Ascoidea corymbosa, A. rubescens, Cephaloascus fragrans, and Saccharomycopsis capsularis. Can. J. Bot. 57, 12591284. Atlas, R.M., and R. Bartha. 1993. Microbial Ecology, Fundamentals and Applications. Addison Wesley, Reading, 563pp. Aucott, J.N., J. Fayen, H. Grossnicklas, A. Morrissey, M.M. Lederman and R.A. Salata. 1990. Invasive infection with Saccharomyces cereuisiae: report of three cases and a review. Rev. Infect. Dis. 12, 406-411. Aulakh, H.S., S.E. Straus and K.J. Kwon-Chung. 1981. Genetic relatedness of Filobasidiella neoformans (Cryptococcus neoformans) and Filobasidiella bacillispora (Cryptococcus bacillisporus) as determined by deoxyribonucleic acid base composition and sequence homology studies. Int. J. Syst. Bacteriol. 31, 97-103. Avise, J. 1989. Gene trees and organismal histories: a phylogenetic approach to population biology. Evolution 43, 1192-1208. Bab'eva, LP, and E.B. Azieva. 1980. The taxonomic composition and ecological characters of yeasts occurring in tundra soils in West Taimir. Mikol. Fitopatol. 14, 99-103. In Russian. Bab'eva, LP, and S.E. Gorin. 1975. Lipomyces anomalus sp. nov. Antonie van Leeuwenhoek 41, 185-191. Bab'eva, LP, and A.V Kartintsev. 1974. Occurrence of the yeast

Rhodosporidium diobouatum on plants. Mosc. Univ. Soil Sci. Bull. (Engl, transl. of Vestn. Mosk. Univ. Pichuoved) 29 (5/6). Bab'eva, LP, and I.S. Reshetova. 1975. A new yeast species Candida podzolica sp. n. from the soil. Microbiology (transl. of Mikrobiologiya) 44, 294-333. Bab'eva, LP, and I.S. Reshetova. 1979. Williopsis pratensis, a new soil yeast. Mikrobiologiya 48, 1040-1043. In Russian. Bab'eva, LP, W.I. Golubev, A.C. Kartintsev, S.E. Gorin and PL. Zaslavskaya. 1973. Yeasts in forest and meadow biogeocenoses. Vestn. Mosk. Univ. Biol. Pochvoved. 6, 67-73. In Russian. Bab'eva, LP, W.I. Golubev, I.S. Reshetova, E.B. Azieva and VM. Blagodatskaya. 1976. Yeasts in high-latitude regions of the northern and southern hemispheres. Vestn. Mosk. Univ. Biol. Pichuoved 31, 76-82. In Russian. Bab'eva, LP, M.M. Vustin, G.L Naumov and M.E. Vinovarova. 1985. Arthroascus schoenii nov. comb., a yeast-like organism. Mikrobiologiya 54, 724-729. Bab'eva, LP, I.S. Reshetova, VM. Blagodatskaya and L.M. Galimova. 1989. New yeast species Candida odintsovii sp. nov. Mikrobiologiya 58, 631-634. In Russian. Bachinskaya, A.A. 1914. Entwicklungsgeschichte und Kultur des neuen Hefepilzes Saccharomyces paradoxus. J. Microbiol. Epidemiol. Immunobiol. 1, 231-250 (cited by Kudryavtsev 1960). Bachinskaya, A.A. 1941. History of the development of a yeast fungus Saccharomycodes lipophora. Mikrobiologiya 10, 200-207. In Russian. Bacon, J.S.D., D. Jones, VC. Farmer and D.M. Webley. 1968. The occurrence of a-l,3-glucan in Cryptococcus, Schizosaccharomyces and Polysporus species, and its hydrolysis by a Streptomycete culture filtrate lysing cell walls of Cryptococcus. Biochim. Biophys. Acta 158, 313-315. Bahadur, K. 1957. Isolation and morphological studies of the Dhar yeast. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 110, 305-308. Baharaeen, S., and H.S. Vishniac. 1982. Cryptococcus lupi sp. nov., an Antarctic basidioblastomycete. Int. J. Syst. Bacteriol. 32, 229-232. Baharaeen, S., and H.S. Vishniac. 1984. 25S ribosomal RNA homologies of basidiomycetous yeasts: taxonomic and phylogenetic implications. Can. J. Microbiol. 30, 613-621. Baharaeen, S., J.A. Bantle and H.S. Vishniac. 1982. The evolution of Antarctic yeasts: DNA base composition and DNA-DNA homology. Can. J. Microbiol. 28, 4 0 6 ^ 1 3 . Baillon, E.H. 1889. Traite de Botanique Medicale Cryptogamique. O. Doin, Paris. Bak, A.L. 1973. DNA base composition in mycoplasma, bacteria, and yeast. Curr. Top. Microbiol. Immunol. 61, 89-149. Bak, A.L., and A. Stenderup. 1969. Deoxyribonucleic acid homology in yeasts. Genetic relatedness within the genus Candida. J. Gen. Microbiol. 59, 21-30. Bak, A.L., C. Christensen and G. Christensen. 1972. Circular, repetitive DNA in yeast. Biochim. Biophys. Acta 269, 527-530. Baker, J.G., I.F Salkin, D.H. Pincus and R.E D'Amato. 1981. Candida paratropicalis, a new species of Candida. Mycotaxon 13, 115-119. Baker, J.M., and N.J.W Kreger-van Rij. 1964. Endomycopsis platypodis sp. n. (Ascomycetes): an auxiliary ambrosia fiangus of Platypus cylindrus Fab. (Col. Platypodidae). Antonie van Leeuwenhoek 30, 433^41. Balloni, W, R. Materassi and M.C. Margheri. 1971. Saccharomyces (Torulaspora) florenzanii sp. n., a new wine fermenting yeast from Sardegna (Italia). Zentralbl. Bakteriol. Parasitenkd., Abt. II, 126, 386388. Balloni, W, G. Florenzano and R. Materassi. 1974. A new species of Sporidiobolus (Spor ueronae) isolated from a tropical bitumenous soil. Ann. Microbiol. Enzimol. 24, 233-240. Balloni, W, G. Florenzano, G. Mazza and M. Polsinelli. 1987. Candida amidevorans sp. nov, a new ascomycetous anamorph yeast from soil. Antonie van Leeuwenhoek 53, 99-106. Ballou, C.E. 1976. Structure and biosynthesis of the mannan component of the yeast cell envelope. Adv. Microb. Physiol. 14, 93-157. Ballou, C.E. 1982. Yeast cell wall and cell surface. In: J.N. Strathem,

References E.W. Jones and J.R. Broach (Eds.), The Molecular Biology of the Yeast Saccharomyces: Life cycle and inheritance. Cold Spring Harbor Press, New York, pp. 335-360. Balzer, E, H. Gougerot and R. Burnier. 1912. Nouvelle mycose: parendomycose gommeuse ulcereuse due a un parasite nouveau le Parendomyces balzeri. Ann. Dermatol. Syph. V, 3, 282-295. Bandoni, R.J. 1957. The spores and basidia of Sirobasidium. Mycologia 49, 250-255. Bandoni, R.J. 1958. Some Tremellaceous fungi in the C.G. Lloyd collection. Lloydia 21, 137-151. Bandoni, R.J. 1961. The genus Naematelia. Am. Midi. Nat. 66, 319-328. Bandoni, R.J. 1963. Conjugation in Tremella mesenterica. Can. J. Bot. 41, 467-474. Bandoni, R.J. 1965. Secondary control of conjugation in Tremella mesenterica. Can. J. Bot. 43, 627-630. Bandoni, R.J. 1979. Fibulobasidium: a new genus in the Sirobasidiaceae. Can. J. Bot. 57, 264-268. Bandoni, R.J. 1984. The Tremellales and Auriculariales: an alternative classification. Trans. Mycol. Soc. Japan 25, 489-530. Bandoni, R.J. 1985. On an undescribed, pleomorphic hyphomycete fi-om litter. Bot. J. Linn. Soc. 91, 3 7 ^ 3 . Bandoni, R.J. 1986. Sirotrema: a new genus in the Tremellaceae. Can. J. Bot. 64, 668-676. Bandoni, R.J. 1987. Taxonomic overview of the Tremellales. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 8 7 110 (Stud. Mycol. 30, 87-110). Bandoni, R.J., and B.N. Johri. 1972. Tilletiaria: a new genus in the Ustilaginales. Can. J. Bot. 50, 3 9 ^ 3 . Bandoni, R.J., and F. Oberwinkler. 1983. On some species of Tremella described by A. Moller. Mycologia 75, 854-863. Bandoni, R.J., and Zang Mu. 1990. On an undescribed Tremella fi-om China. Mycologia 82, 270-273. Bandoni, R.J., A.A. Bisalputra and T. Bisalputra. 1967. Ascospore development in Hansenula anomala. Can. J. Bot. 45, 361-366. Bandoni, R.J., K.J. Lobo and S.A. Brezden. 1971. Conjugation and chlamydospores in Sporobolomyces odorus. Can. J. Bot. 49, 683-686. Bandoni, R.J., B.N. Johri and S.A. Reid. 1975. Mating among isolates of three species oi Sporobolomyces. Can. J. Bot. 53, 2942-2944. Bandoni, R.J., F. Oberwinkler and A.A. Bandoni. 1991. On species of Filobasidium associated with Yuccas. Syst. Appl. Microbiol. 14, 9 8 101. Banno, I. 1963. Preliminary report on cell conjugation and mycelial stage in Rhodotorula yeasts. J. Gen. Appl. Microbiol. 9, 249-251. Banno, L 1967. Studies on the sexuality of Rhodotorula. J. Gen. Appl. Microbiol. 13, 167-196. Banno, L, and Y. Kaneko. 1989. Genetic analysis of taxonomic relation between Saccharomyces cereoisiae and Saccharomyces bayanus. In: A. Martini and A. Vaughan-Martini (Eds.), Yeast as a Main Protagonist of Biotechnology, Proc. 7th Int. Symp. on Yeast. Yeast 5, 373-377. Banno, I., and K. Mikata. 1985. Scanning electron microscopy of ascospores fi-om various strains of Debaryomyces hansenii (Zopf) Lodder et Kreger-van Rij. Inst. Ferment. Osaka Res. Commun. 12, 63-69. Baptist, J.N., and C.P. Kurtzman. 1976. Comparative enzyme patterns in Cryptococcus laurentii and its taxonomic varieties. Mycologia 68, 1195-1203. Barker, E.R., and M.W. Miller. 1969. Some properties of Saccharomyces kluyveri. Antonie van Leeuwenhoek 35, 159-171. Barker, J.S.F., and W.T. Starmer (Eds.). 1982. Ecological Genetics and Evolution. The cactus-yeast-Z)ro50'/7/iz7a model system. Academic Press, Sydney, 362pp. Barker, J.S.R, D.C. Vacek, RD. East and W.T. Starmer. 1986. Allozyme genotypes for Drosophila buzzati: feeding and oviposition preferences for microbial species, and habitat selection. Aust. J. Biol. Sci. 39, 4 7 58. Bamett, J.A., and R.W.M. Buhagiar. 1971. Torulopsis fragaria species nova, a yeast from fi-uit. J. Gen. Microbiol. 67, 233-238.

957

Barnett, J.A., and M. Ingram. 1955. Technique in the study of yeast assimilation reactions. J. Appl. Microbiol. 18, 131-148. Barnett, J.A., R.W. Payne and D. Yarrow. 1983. Yeasts: Characteristics and Identification. Cambridge University Press, Cambridge, 811pp. Barnett, J.A., R.W. Payne and D. Yarrow. 1990. Yeasts: Characteristics and Identification, 2nd edn. Cambridge University Press, Cambridge, 1002pp. Barns, S.M., D.J. Lane, M.L. Sogin, C. Bibeau and WG. Weisburg. 1991. Evolutionary relationships among pathogenic Candida species and relatives. J. Bacteriol. 173, 2250-2255. Barre, P., and P. Galzy. 1960. Etude et determination d'une levure osmophile. Ann. Technol. 4, 345-348. Barret, A., P. Bidan and L. Andre. 1955. Sur quelques accidents de vinification dus a des levures a voile. C.R. Acad. Agric. France 41, 426^31. Bartha, R., and R.M. Atlas. 1977. The microbiology of aquatic oil spills. Adv Appl. Microbiol. 22, 225-266. Bartnicki-Garcia, S. 1968. Cell wall chemistry, morphogenesis, and taxonomy of fiingi. Annu. Rev. Microbiol. 22, 87-108. Bartnicki-Garcia, S. 1970. Cell wall composition and other biochemical markers in fungal phylogeny. In: J.B. Harbome (Ed.), Phytochemical Phylogeny. Academic Press, New York, pp. 81-103. Bartnicki-Garcia, S. 1990. Role of vesicles in apical growth and a new mathematical model of hyphal morphogenesis. In: LB. Heath, (Ed.), Tip Growth in Plant and Fungal Cells, Academic Press, London, pp. 211-232. Bartnicki-Garcia, S., and E. Lippman. 1989. Fungal cell wall composition. In: W.M. O'Leary (Ed.), Practical Handbook of Microbiology, CRC Press, Boca Raton, FL, pp. 381-404. Bartnicki-Garcia, S., F. Hergert and G. Gierz. 1989. Computer simulation of fiingal morphogenesis and the mathematical basis for hyphal (tip) growth. Protoplasma 153, 46-57. Basgal, W 1931. Contribuigao ao estudo das blastomicoses pulmonares. Thesis. Institute Oswaldo Cruz, Rio de Janeiro. Bastide, J.M., E.H. Hadibi and M. Bastide. 1979. Taxonomic significance of yeast sphaeroplast release after enzymic treatment of intact cells. J. Gen. Microbiol. 113, 147-153. Bastide, M., P. Trave and J.M. Bastide. 1986. L'hydrolyse enzymatique de la parol appliquee a la classification de levures. Ann. Microbiol. 126, 275-294. Batista, A.C., and J.S. Silveira. 1959a. Kloeckera faecalis, n. sp. isolado de fezes humanas. O. Hospital 56, 505-507. Batista, A.C., and I S . Silveira. 1959b. Una variedade nova de Endomycopsis mali (Lewis) Dekker assinalada sobre fezes humanas. Rev Ass. Med. Bras. 5, 353-354. Batista, A.C., and J.S. Silveira. 1959c. Alqumas novas especies de Candida do aparelho digestivo e orgaos anexos do homen. O. Hospital 56, 293-299. Batista, A.C., and J.S. Silveira. 1960. Trichosporon figueirae n. sp. assinalado como fimgo intestinal. Mycopathol. Mycol. Appl. 12, 196198. Batista, A.C., and J.S. Silveira. 1962. Micose pulmonar e Candida genitalis nobis n. sp. Univ. de Recife, Inst. Micol. 170, 3. Batista, A.C., J.S. Silveira and G.L. Silveira. 1959a. Um novo Trichosporon isolado do apendice cecal humano. Rev. Assoc. Med. Brasileira 5, 351-352. Batista, A.C., J.R. Vieira and R.P. Coelho. 1959b. Schwanniomyces hominis n. sp. como causa de lesion epidermica en recien nacido. Rev. Ecuatoriana Hig. Med. Trop. 16, 136-141. Batista, A.C., S.T.C. Campos and S. Oliveira. 1963. Epidermomicose devida a Trichosporon loboi n. sp. Publ. Inst. Micol. Recife 207, 3-9. Batra, L.R. 1963a. Contribution to our knowledge of ambrosia fungi. II. Endomycopsis fasciculata nom. nov. (Ascomycetes). Am. J. Bot. 50, 481-487. Batra, L.R. 1963b. Life history of species of Ascoidea. Am. J. Bot. 50, 624. Batra, L.R. 1963c. Habitat and nutrition of Dipodascus and Cephaloascus. Mycologia 55, 508-520.

958

References

Batra, L.R. 1967. Ambrosia fungi: a taxonomic revision, and nutritional Beijerinck, M.W. 1889a. L'auxanographie, ou la methode de studies of some species. Mycologia 59, 976-1017. I'hydrodiffusion dans la gelatine appliquee aux recherches microbiBatra, L.R. 1971. Two new Hemiascomycetes: Pichia crossotarsi and P. ologiques. Arch. Neerl. Sci. Exactes Nat. 23, 367-372. microspora. Mycologia 63, 994-1001. Beijerinck, M.W. 1889b. Sur le Kefir. Arch. Neerl. Sci. Exactes Nat. 23, Batra, L.R. 1973. Nematosporaceae (Hemiascomycetidae): taxonomy, 428-444. pathogenicity, distribution and vector relations. Tech. Bull. No. 1469, Beijerinck, M.W. 1892. Zur Ernahrungs-Physiologie des Kahmpilzes. ARS, US Dept. of Agric. Washington, D.C., 71pp. Zentralbl. Bakteriol. Parasitenkd. 11, 68-75. Batra, L.R. 1978. Taxonomy and systematics of the Hemiascomycetes Beijerinck, M.W. 1894. Schizosaccharomyces octosporus, eine acht(Hemiascomycetidae). In: C.V Subramanian (Ed.), Taxonomy of sporige Alkoholhefe. Zentralbl. Bakteriol. Parasitenkd. 16, 49-58. Fungi, Proc. Int. Symp. on Taxonomy of Fungi, Madras, 1973. Beijerinck, M.W 1895. Uber Nachweis und Verbreitung der Glukase, University of Madras, Part I, pp. 187-214. das Enzym der Maltose. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 1, Batra, L.R., and H. Francke-Grosmann. 1961. Contributions to our 221-229, 265, 329. knowledge of ambrosia fiingi. I. Ascoidea hylecoeti sp. nov. Beijerinck, M.W. 1897. Weitere beobachtungen iiber die Octosporushefe. (Ascomycetes). Am. J. Bot. 48, 453-456. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 3, 518-525. Batra, L.R., and H. Francke-Grosmann. 1964. Two new ambrosia fungi - Beijerinck, M.W. 1898a. Uber Regeneration der Sporenbildung bei Ascoidea asiatica and A. africana. Mycologia 56, 632-636. Alkoholhefen wo diese Funktion im Verschwinden begriffen ist. Battacharjee, A.K., K.J. Kwon-Chung and C.PJ. Glademans. 1978. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 4, 657-663, 721-730. The structure of the capsular polysaccharide from Cryptococcus Beijerinck, M.W 1898b. Sur la regeneration de la faculte de produire neoformans serotype D. Carbohydrate Res. 73, 183-192. des spores chez des levures en voie de la perdre. Arch. Neerl. Sci. Bauch, R. 1925. Untersuchungen iiber die Entwicklungsgeschichte und Exactes Nat., Ser. II, 2, 269-289. Sexualphysiologie der Ustilago bromiuora und U. grandis. Z. Botan. Beijerinck, M.W. 1904. Chorella uariegata, ein bunter Mikrobe. Rec. 17, 129-177. Trav Bot. Neerl. 1, 14-17. Bauer, R., and F. Oberwinkler. 1990a. Direct connections from cytoplasm Beijerinck, M.W. 1908. Die Erscheinung der Flockenbildung oder to cytoplasm; an unusual host-parasite interaction of the tremelloid Agglutination bei Alkoholhefen. Zentralbl. Bakteriol. Parasitenkd., mycoparasite Tetragoniomyces uliginosus. Protoplasma 154, 157-160. Abt. II, 20, 137-157, 641-650. Bauer, R., and F. Oberwinkler. 1990b. Haustoria of the mycoparasitic Beijerinck, M.W. 1912. Mutation bei Mikroben. Foha Microbiol. 1, 1Heterobasidiomycete Christiansenia pallida. Cytologia 55, 419^24. 97, also in Verzamelde Geschriften V, 25, 25-88 (1922). Bauer, R., F Oberwinkler and G. Demi. 1989. Ultrastruktur der Bencini, A., and E. Federici. 1928. Su due nuove specie di miceti Basidiensepten phragmobasidialer Brandpilz. Z. Mykologie 55, 163rinvenuti nella cornea. Atti R. Accad. Fisiocrit. Siena, Ser. X, 3, 743168. 766. Bauer, R., F. Oberwinkler and D. McLaughlin. 1992. Meiosis, spindle Benda, I. 1962. Torulopsis burgeffiana nov. spec, eine von Weinbeeren pole body cycle, and basidium ontogeny in the Heterobasidiomycete isolierte, neue Hefeart. Antonie van Leeuwenhoek 28, 208-214. Agaricostilbum pulcherrimum. Syst. Appl. Microbiol. 15, 259-274. Benedek, T. 1930. Cryptococcus malassezi (Pityrosporon malassezi Bauer, R., K. Mendgen and F. Oberwinkler. 1995. Septal pore apparatus Sabouraud 1895). Zentralbl. Bakteriol. Parasitenkd., Abt. I, 116, 317of the smut Ustacystis waldsteiniae. Mycologia 87, 18-24. 331. Baumberger, J.D. 1919. A nutritional study of insects, with special Benham, R.W 1935. The terminology of the Cryptococci with a note reference to microorganisms and their substrata. J. Exp. Zool. 28, on Cryptococcus mollis. Mycologia 27, 496-502. 1-81. Benham, R.W. 1955. The genus Cryptococcus: the present status and Beauverie, J. 1929. Sur un Zygosaccharomyces de la datte isocriteria for the identification of species. Trans. N.Y. Acad. Sci., Ser. heterogame. Bull. Soc. Mycol. France 45, 153-170, II, 17, 418^29. Beauverie, J., and C. Lesieur. 1912. Etude de quelques levures Benhamou, N., H. Chamberland, S. Noel and G.B. Ouellette. 1990. rencontrees chez I'homme dans certains exsudats pathologiques. Ultrastructural localization of (3-1,4-glucan-containing molecules in J. Phys. Pathol. Gen. 14, 983-1008. the cell walls of some fiingi; a comparative study between spore and Beck, O. 1922. Eine neue Endomyces-Art, Endomyces bisporus. Ann. mycelium. Can. J. Microbiol. 36, 149-158. Mycol. 20, 219-227. Bennett, J.E. 1990. Searching for the yeast connection. N. Engl. J. Med. Beckett, A., R.F. Illingworth and A.H. Rose. 1973. Ascospore wall 323, 1766-1767. development in Saccharomyces cerevisiae. J. Bacteriol. 113, 1054Bennett, J.E., and K.J. Kwon-Chung. 1989. Correlates of serotype in 1057. C. neoformans. In: E. Drouhet, G.T. Cole, L. de Repentigny, J.P. Latge Bedford, C.L. 1942. A taxonomic study of the genus Hansenula. and B. Dupont (Eds.), Fungal Antigen Isolation, Purification, and Mycologia 34, 628-649. Detection. Plenum Press, New York, pp. 265-269. Beech, F.W. 1965. Pichia delftensis sp. n. Antonie van Leeuwenhoek 31, Bennett, J.E., K.J. Kwon-Chung and D.H. Howard. 1977. Epidemiologic 81-83. differences among serotypes of Cryptococcus neoformans. Am. J. Beech, F.W., and R.R. Davenport. 1969. The isolation of non-pathogenic Epidemiol. 105, 582-586. yeasts. In: D.A. Shapton and G.W. Gould (Eds.), Isolation Methods Bennett, J.H. 1842. On the parasitic vegetable structures found growing for Microbiologists. Academic Press, New York, pp. 71-88. in living animals. Trans. R. Soc. Edinburgh 15, 277-294. Beech, F.W., and R.R. Davenport. 1971. Isolation, purification and Benny, G.L., and J.W Kimbrough. 1980. A synopsis of the orders and maintenance of yeasts. In: J.R. Morris and D.W. Ribbons (Eds.), families of Plectomycetes with keys to genera. Mycotaxon 12, 1-91. Methods in Microbiology, Vol. 4, Academic Press, New York, pp. 153Berbee, M.L., and J.W Taylor. 1993. Ascomycete relationships: dating 182. the origin of asexual lineages with 18S ribosomal RNA gene Beech, F.W., J.G. Carr and R.C, Codner. 1955. A multipoint inoculator sequence data. In: D.R. Reynolds and J.W. Taylor (Eds.), The Fungal for plating bacteria or yeasts. J. Gen. Microbiol. 13, 408^10. Holomorph: Mitotic, Meiotic and Pleomorphic Speciation in Fungal Beech, F.W., R.R. Davenport, D.A.A. Mossel, K.E. Dijkmann, Systematics. CAB International, Wallingford, UK, pp. 67-78. M. Koopmans, J. de Jong, M.C. Put and R.H. Tilbury. 1980. Media Berbee, M.L., and K. Wells. 1988. Ultrastructural studies of mitosis and and methods for growing yeasts: proceedings of a discussion meeting. the septal pore apparatus in Tremella globosa. Mycologia 80, 479In: FA. Skinner, S.M. Passmore & R.R. Davenport (Eds.), Biology 492. and Activities of Yeasts. Academic Press, London, pp. 259-293. Behrend, G. 1890. Uber Trichomycosis nodosa (Juhel-Renoy): piedra Berkeley, M.J. 1856. Decades of fiingi. J. Bot. «fe Kew Misc. 8, 272-280. Berkeley, M.J. 1860. Outlines of British Fungology. L. Reeve, London, (Osorio). Berl. Klin. Wochenschr. 27, 464^67.

References Berkhout, CM. 1923. De schimmelgeslachten Monilia, Oidium, Oospora en Torula, Thesis. University of Utrecht. Berlese, A.N. 1895. I funghi diversi dai Saccaromiceti e capaci di deteraiinare la fermentazione alcoolica. G. Viticolt. Enol. 3, 52-55. Bemardi, G., M. Faures, G. Pipemo and P.P. Slonimski. 1970. Mitochondrial DNAs from respiratory-sufficient and cytoplasmic respiratory-deficient mutants of yeast. J. Mol. Biol. 48, 23-43. Berthe, M.C., C. Charpentier, J. Lematre and R. Bonaly. 1981. Glucosamine and chitin accumulation in cell walls of the yeast Rhodotorula glutinis CBS 3044. Influence of culture conditions. Biochem. Biophys. Res. Commun. 100, 1504-1514. Bessey, E.A. 1950. Morphology and Taxonomy of Fungi. Blakiston Co., Philadelphia, PA. Bevan, E.A., and M. Makover. 1963. The physiological basis of the killer character in yeast. In: S.J. Geerts (Ed.), Genetics Today, Proc. 11th Int. Congress on Genetics, Vol. I. Pergamon Press, Oxford, pp. 202-203. Bezerra, J.L., and J.W. Kimbrough. 1978. A new species of Tremella parasitic on Rhytidhysterium rufulum. Can. J. Bot. 56, 3021-3033. Bicknell, J.N., and H.C. Douglas. 1970. Nucleic acid homologies among species of Sacchawmyces. J. Bacteriol. 101, 505-512. Biggs, R. 1937. Dipodascus uninucleatus. Mycologia 29, 34-44. Billon-Grand, G. 1981. Contribution a la systematique du genre Pichia. Mycopathologia 75, 9-21. Billon-Grand, G. 1985. Coenzyme Q de quelques especes du genre Pichia. Determination qualitative et quantitative. Mycopathologia 90, 101-106. Billon-Grand, G. 1987. Minor ubiquinones of the yeast coenzyme Q system: importance in the taxonomy of the yeasts. J. Gen. Appl. Microbiol. 33, 381-390. Billon-Grand, G. 1988. Contribution a la taxonomie et a la phylogenie des levures. Apport du critere "Coenzyme Q". Doctorat Lyon I, p. 145 (cited by Billon-Grand 1989). Billon-Grand, G. 1989. A new ascosporogenous yeast genus: Yamadazyma gen. nov. Mycotaxon 35, 201-204. Bisby, G.R., A.H.R. Buller and J. Deamess. 1929. The Fungi of Manitoba. Longmans Green, London. Bismanis, J.E. 1976. Endosymbionts of Sitodrepa panicea. Can. J. Microbiol. 22, 1415-1424. Bizzozero, J. 1884. Uber die Mikrophyten der normalen Oberhaut des Menschen. Virchows Arch. Pathol. Anat. 98, 441^59. Bjornberg, A., and J. Schnurer. 1993. Inhibition of the growth of grain-storage molds in vitro by the yeast Pichia anomala (Hansen) Kurtzman. Can. J. Microbiol. 39, 623-628. Black, S.H., and C. Gorman. 1971. The cytology of Hansenula. III. Nuclear segregation and envelopment during ascosporogenesis in Hansenula wingei. Arch. Mikrobiol. 79, 231-248. Blagodatskaya, VM. 1979. Saccharomycopsis pseudolipolytica sp. nov, the perfect stage of Candida pseudolipolytica. Mikrobiologiya 48, 106-108. Blagodatskaya, VM., and A. Kockova-Kratochvilova. 1973. The heterogeneity of the species Candida lipolytica, Candida pseudolipolytica n. sp. and Candida lipolytica var. thermotolerans n. var. Biologia (Bratislava) 28, 709-716. Blaich, R., and K. Esser. 1975. Function of enzymes in wood destroying fungi. II. Multiple forms of laccase in white rot fiingi. Arch. Microbiol. 103, 271-277. Blamire, J., D.R. Cryer, D.B. Finkelstein and J. Marmur. 1972. Sedimentation properties of yeast nuclear and mitochondrial DNA. J. Mol. Biol. 67, 11-24. Blanz, PA. 1978. Uber die systematische Stellung der Exobasidiales. Z. Mykologie 44, 91-107. Blanz, PA., and M. Gottschalk. 1984. A comparison of 5S ribosomal RNA nucleotide sequences from smut fungi. Syst. Appl. Microbiol. 5, 518-526. Blanz, PA., and M. Gottschalk. 1986. Systematic position of Septobasidium, Graphiola and other basidiomycetes as deduced on the basis of their 5S ribosomal RNA nucleotide sequences. Syst. Appl. Microbiol. 8, 121-127.

959

Blanz, P.A., and M.G. Unseld. 1987. Ribosomal RNA as a taxonomie tool in mycology. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 247-258 (Stud. Mycol. 30, 247-258). Blanz, P.A., M.G. Unseld and I. Rauh. 1989. Group-specific differences in the secondary structure of the 28S ribosomal RNA of yeasts. Yeast 5, S399-S404. Blaschke-Hellmessen, R., H. Schuster and V Bergmann. 1985. Differenzierung von Varianten bei Prototheca zopfii Kriiger 1894. Arch. Exp. Vet. Med. Leipzig 39, 387-397. Bodenhoff, J., P. Geertinger and J. Prause. 1979. Isolation of Sporothrix fungorum from a 500-year old mummy found in Greenland. Acta Pathol. Microbiol. Scand. Sect. B 87, 201-203. Boedijn, K.B. 1934. The genus Sirobasidium in the Netherlands Indies. Bull. Jard. Bot. Buitenz., Ser. Ill, 13, 266-268. Boedijn, K.B. 1960. On a new genus of the Endomycetaceae. Mycopathol. Mycol. Appl. 12, 163-167. Boedijn, K.B., and J.A. Verbunt. 1938. Annotations about dermatomycoses in Batavia. Mycopathologia 1, 185-198. Boekhout, T. 1987. Systematics of anamorphs of Ustilaginales (smut fiingi) - a preliminary survey. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 137-149 (Stud. Mycol. 30, 137-149). Boekhout, T. 1991a. A revision of ballistoconidia-forming yeasts and ftmgi. Stud. Mycol. 33, 1-194. Boekhout, T. 1991b. Systematics of the genus Itersonilia Derx, a comparative phenetic study. Mycol. Res. 95, 135-146. Boekhout, T. 1994. Classification of heterobasidiomycetous yeasts and fiingi. Abstracts Fifth Int. Mycol. Congr., Vancouver, B.C., Canada, p. 18. Boekhout, T. 1995. Pseudozyma Bandoni emend. Boekhout, a genus for yeast-like anamorphs of Ustilaginales. J. Gen. Appl. Microbiol. 41, 359-366. Boekhout, T, and W.A.M. Linnemans. 1982. Ultrastructure of mitosis in Rhodosporidium toruloides. Stud. Mycol. 22, 23-38. Boekhout, T, A. Fonseca and W.H. Batenburg-van der Vegte. 1991a. Bulleromyces genus novum (Tremellales), a teleomorph for Bullera alba, and the occurrence of mating in Bullera variabilis. Antonie van Leeuwenhoek 59, 81-93. Boekhout, T, G. Poot, P. Hackmann and H.Y Steensma. 1991b. Genomic characteristics of strains of Itersonilia: taxonomie consequences and life cycle. Can. J. Microbiol. 37, 188-194. Boekhout, T, J. van Gool, H. van den Boogert and T Jille. 1992a. Karyotyping and G + C composition as taxonomie criteria applied to the systematics of Tilletiopsis and related taxa. Mycol. Res. 96, 331342. Boekhout, T, Y. Yamada, A.C.M. Weijman, H.J. Roeijmans and WH. Batenburg-van der Vegte. 1992b. The significance of coenzyme Q, carbohydrate composition and septal ultrastructure for the taxonomy of ballistoconidia-forming yeasts and fungi. Syst. Appl. Microbiol. 15, 1-10. Boekhout, T, A. Fonseca, J.-P. Sampaio and W.I. Golubev. 1993. Classification of heterobasidiomycetous yeasts: characteristics and affiliation of genera to higher taxa of Heterobasidiomycetes. Can. J. Microbiol. 39, 276-290. Boekhout, T, C.P Kurtzman, K. O'Donnell and M.Th. Smith. 1994. Phylogeny of the yeast genera Hanseniaspora (anamorph Kloeckera), Dekkera (anamorph Brettanomyces), and Eeniella as inferred from partial 26S ribosomal DNA nucleotide sequences. Int. J. Syst. Bacteriol. 44, 781-786. Boekhout, T, J.W. Fell and K. O'Donnell. 1995a. Molecular systematics of some yeast-like anamorphs belonging to the Ustilaginales and Tilletiales. Stud. Mycol. 38, 175-183. Boekhout, T, H. Roeijmans and F. Spaaij. 1995b. A new pleomorphic ascomycete, Calyptrozyma arxii gen. et sp. nov., isolated from the human lower oesophagus. Mycol. Res. 99, 1239-1246. Boidin, J., and F. Abadie. 1954. Les levures des liqueurs tannantes

960

References

vegetales; leur action sur les tanins pyrogalliques. Bull. Soc. Mycol. France 70, 353-383. Boidin, J., and J.-M, Adzet. 1957. Deux curieuses levures isolees d'extraits tannants d'origine vegetale: Pachysolen (nov. gen.) tannophilus nov. sp. et P. pelliculatus nov. sp. Bull. Soc. Mycol. France 73, 331-342. Boidin, J., F Abadie, F.L. Jacob and M.-C. Pignal. 1962. Les levures a spores reniformes. Bull, Soc. Mycol. France 78, 155-203. Boidin, J., M.-C. Pignal, G. Mermier and M. Arpin. 1963. Quelques levures camerounaises. Cah. Maboke 1, 86-100. Boidin, J., M.-C. Pignal, Y. Lehodey, A. Vey and F Abadie. 1964. Le genre Pichia sensu lato (Premiere Contribution). Bull. Soc. Mycol. France 80, 396-438. Boidin, J., F. Abadie and Y. Lehodey. 1965a. Le genre Pichia sensu lato (Deuxieme Contribution). Bull. Soc. Mycol. France 81, 5-23. Boidin, J., M.-C. Pignal and M. Besson. 1965b, Le genre Pichia sensu lato (Quatrieme Contribution). Bull. Soc. Mycol. France 81, 566-606. Bolen, PL., C.P. Kurtzman, J.M. Ligon, B.M. Mannarelli and R.J. Bothast. 1992, Physical and genetic characterization of linear DNA plasmids from the heterothallic yeast Saccharomycopsis crataegensis. Antonie van Leeuwenhoek 61, 195-205, Bolognesi, G,, and G.A. Chiurco. 1927. Micosi chirurg, (cited by Lodder and Kreger-van Rij 1952). Bonde, M.R., J.A. Micales and G.L. Peterson. 1993. The use of isozyme analysis for identification of plant-pathogenic fungi. Plant Dis. 77, 961-968. Bonner, T.L, D.J. Brenner, B.R. Neufeld and R.J. Britten. 1973. Reduction in the rate of DNA reassociation by sequence divergence. J. Mol. Biol. 81, 123-135. Bonorden, H.F 1851. Handbuch der allgemeinen Mykologie als Anleitung zum Studium derselben, nebst speziellen Beitragen zur Vervollkommnung dieses Zweiges der Naturkunde, Schweizerbart, Stuttgart, 336pp. Boone, C, H. Bussey, D. Greene, D.Y. Thomas and T. Vemet. 1986. Yeast killer toxin: site-directed mutations implicate the precursor protein as the immunity component. Cell 46, 105-113. Booth, J.L., and H.S. Vishniac. 1987. Urease testing and yeast taxonomy. Can. J. Microbiol. 33, 396^04. Borgia, G., A. Tallarina, J. Crowell, A. Lambiase, S. Cicciarello, L. Reyaud and M. Piazza. 1989. Mycelium-yeast transition in Histoplasma capsulatum. Mycoses 32, 584-589. Bortol, A., C. Nudel, E. Fraile, R. de Torres, A. Giulietti, J.FT. Spencer and D. Spencer. 1986. Isolation of yeast with killer activity and its breeding with an industrial baking strain by protoplast fusion. Appl. Microbiol. Biotechnol. 24, 414-416. Borzi, A. 1888. Eremothecium cymbalariae, nuovo ascomicete. Nuovo Giorn. Bot. Ital. 20, 452-456. Bos, P., and J.C. de Bruyn. 1973. The significance of hydrocarbon assimilation in yeast identification. Antonie van Leeuwenhoek 39, 99107. Bostian, K., H. Bussey, Q. Elliot, V Burn, A. Smith and D.J. Tipper. 1984. Sequence of the preprotoxin dsRNA gene of type I killer yeast: multiple processing events produce a two component toxin. Cell 36, 741-751. Botha, A., and J.L.F Kock. 1993. The distribution and taxonomic value of fatty acids and eicosanoids in the Lipomycetaceae and Dipodascaceae. Antonie van Leeuwenhoek 63, 111-123. Bourdot, H., and L. Galzin, 1928, Hymenomycetes de France, Marcel Bry, Sceaux, Bourett, T.M,, and D,J, McLaughlin, 1986, Mitosis and septum formation in the basidiomycete Helicobasidium mompa. Can. J. Bot. 64, 130145. Bourgeois, M. 1915. Uber Onychomykosis saccharomycetica. Dermatol. Z. 22, 411-420. Boutroux, L. 1884, Sur la conservation des ferments alcooliques dans la nature, Ann, Sci. Nat., Ser. VI, 17, 144-209. Bowen, A.R., J.L. Chenwu, M. Momany, R. Young, P.J. Szaniszlo and

P.W. Robbins. 1992. Classification of chitin synthases. Proc. Natl. Acad. Sci. USA 89, 519-523. Bowers, B., G. Levin and E. Cabib. 1974. Effect of polyoxin D on chitin synthesis and septum formation in Saccharomyces cereuisiae. J. Bacteriol, 119, 564-575. Bowman, PL, and D.G. Aheam. 1978. Ecology of Cryptococcus neoformans in Georgia. Proc. IV Int. Conf Mycoses, Pan Am. Health Org. Sci. Publ. No. 356, 258-268. Brady, L, 1960, Occurrence of Itersonilia and Tilletiopsis on lesions caused by Entyloma. Trans. Br. Mycol. Soc. 43, 31-50, Brake, A,J,, J,P, Merryweather, D.G. Coit, U.A. Heberlein, F.R. Masiarz, G,T. Mullenbach, M,S, Urdea, P Valenzuela and PJ. Barr. 1984, a-Factor-directed synthesis and secretion of mature foreign proteins in Saccharomyces cereuisiae. Proc, Natl. Acad. Sci. USA 81,4642^646. Brault, J., and L. Masselot. 1911. Etude sur une nouvelle mycose. Ann. Dermatol. Syph. 2, 592-602. Brefeld, O. 1881. Die Brandpilze I. In: Botanische Untersuchungen iiber Hefenpilze. Fortsetzung der Schimmelpilze, Heft 4. Arthur Felix, Leipzig, pp. 1-191. Brefeld, O. 1888. Basidiomyceten II. Protobasidiomyceten. Untersuchungen aus dem Gesamtgebiete der Mykologie, VII. Arthur Felix, Leipzig. Brefeld, O. 1895a. Die Brandpilze II. In: Untersuchungen aus dem Gesamtgebiete der Mykologie, Heft 11. Heinrich Schonigh, Munster i. W., pp. 1-98; Plates 1-5. Brefeld, O. 1895b. Die Brandpilze III. Hemibasidii. In: Untersuchungen aus dem Gesamtgebiete der Mykologie, Heft 12. Heinrich Schonigh, Munster i. W., pp. 99-236; Plates 6-12. Brefeld, O., and G. Lindau. 1891. Die Formen der Hemiasci und ihre Kultur in Nahrlosungen. Unters. Gesammtgeb. Mykol. 9, 91-118, Brenner, D.J, 1973, DNA reassociation in the taxonomy of enteric bacteria, Int, J, Syst. Bacteriol. 23, 298-307, Brenner, D.J,, G.R. Fanning, A. Rake and K.E. Johnson. 1969. A batch procedure for thermal elution of DNA from hydroxyapatite. Anal. Biochem. 28, 447^59. Brenner, D.J., A.G. Steigerwalt and G.R. Fanning. 1972. Differentiation of Enterobacter aerogenesfromklebsiellae by deoxyribonucleic acid reassociation. Int. J. Syst. Bacteriol. 22, 193-200. Breunig, K.D,, V Mackedonski and C,P, Hollenberg, 1982, Transcription of the bacterial (3-lactamase gene in Saccharomyces cereuisiae. Gene 20, 1-10. Brierly, R.A., C. Bussineau, R. Kosson, A. Melton and R.S. Siegel. 1990. Fermentation development of recombinant Pichia pastoris expressing the heterologous gene bovine lysozyme. Ann. N.Y Acad, Sci. 589, 350-362. Brigidi, P., D. Matteuzzi and F. Fava. 1988. Use of protoplast ftision to introduce methionine overproduction into Saccharomyces cereuisiae. Appl. Microbiol. Biotechnol. 28, 268-271. Britten, R.J. 1986. Rates of DNA sequence evolution differ between taxonomic groups. Science 231, 1393-1398. Britten, R.J., and D.E, Kohne. 1968. Repeated sequences in DNA. Science 161, 529-540. Britten, R.J., D.E. Graham and B.R. Neufeld. 1974. Analysis of repeating DNA sequences by reassociation. In: L. Grossman and K. Moldave (Eds.), Methods in Enzymology, Vol. 29. Academic Press, New York, pp. 363-418. Brock, T.D. 1959. Mating reaction in Hansenula wingei. Relation of cell surface properties to agglutination. J, Bacteriol, 78, 59-68. Brock, T.D. 1965. Biochemical and cellular changes occurring during conjugation in Hansenula wingei. J. Bacteriol. 90, 1019-1025. Brough, S. 1974. Tremella globospora, in the field and in culture. Can. J. Bot. 52, 1853-1859. Brown, A.D. 1978. Compatible solutes and extreme water stress in eukaryotic micro-organisms. Adv. Microb. Physiol, 17, 181-242. Bruce, J., and E.O. Morris. 1973. Psychrophilic yeasts isolated from marine fish. Antonie van Leeuwenhoek 39, 331-339. Bruenn, J. 1986. The killer system of Saccharomyces cereuisiae and other yeasts. In: K.W. Buck (Ed.), Fungal Virology. CRC Press, Boca Raton, FL, pp. 85-108.

References Brumpt, E. 1913. Precis de Parasitologic, 2mc ed., Paris. Brumpt, E. 1922. Precis de Parasitologic, 3mc ed., Paris. Brumpt, E. 1927. Precis de Parasitologic, 4me ed., Paris. Brumpt, E. 1936. Precis de Parasitologic, 5me ed., Paris. Bruns, T.D., T.J. White and J.W. Taylor. 1991. Fungal molecular systematics. Annu. Rev. Ecol. Syst. 22, 525-564. Bruns, T.D., R. Vilgalys, S.M. Barns, D. Gonzalez, D.S. Hibbett, D.J. Lane, L. Simon, S. Stickel, T.M. Szaro, W.G. Weisburg and M.L. Sogin. 1992. Evolutionary relationships within the fungi: analyses of nuclear small subunit rRNA sequences. Mol. Phylog. Evol. 1,231-241. Brunton, A.H., and G.M. Gadd. 1991. Evidence for an inositol lipid signal pathway in the yeast-mycelium transition of Ophiostoma ulmi, the Dutch elm disease fiingus. Mycol. Res. 95, 4 8 4 ^ 9 1 . Buchner, P. 1965. Endosymbiosis of Animals with Plant Microorganisms. Wiley Interscience, London. Buchwald, N.F. 1939. Fungi imperfecti (Deuteromycetes). Kongelige Veterinaer-og Landbohojskole, Kopenhagen. Buckley, H.R. 1971. Fungi pathogenic for man and animals: 2. The subcutaneous and deep-seated mycoses. In: J.R. Norris and D.W. Ribbons (Eds.), Methods in Microbiology, Vol. 4. Academic Press, New York, pp. 461-^78. Buckley, H.R., and N. van Uden. 1967. Candida shehatae sp. n., a yeast associated with wood-destroying insects. Mycopathol. Mycol. Appl. 32, 297-301. Buckley, H.R., and N. van Uden. 1968. Five new Candida species. Mycopathol. Mycol. Appl. 36, 257-266. Buecher, E.J., and H.J. Phaflf. 1970. Growth of Saccharomycopsis Schionning under continuous gassing. J. Bacteriol. 104, 133-137. Buecher, E.J., and H.J. Phaff. 1972. Dimorphism in a new isolate of Saccharomycopsis Schionning. Can. J. Microbiol. 18, 901-907. Buhagiar, R.W.M. 1975. Torulopsis bacarum, Torulopsis pustula and Torulopsis multis-gemmis sp. nov., three new yeasts from soft fruit. J. Gen. Microbiol. 86, 1-11. Buhagiar, R.W.M. 1979. Candida fusiformata sp. nov, a new yeast from cabbages and cauliflowers. J. Gen. Microbiol. 110, 91-97. Buhagiar, R.W.M., and J.A. Barnett. 1973. Sterigmatomyces acheniorum species nova, a yeast from strawberries. J. Gen. Microbiol. 77, 71-78. Buhagiar, R.W.M., D. Yarrow and J.A. Barnett. 1983. Bullera crocea and Bullera armeniacea, two new yeasts from fi^uit and vegetables. J. Gen. Microbiol. 129, 3149-3155. Bulder, C.J.E.A. 1955. Some observations on the lipolytic activity of micro-organisms and a new method for its detection. Antonie van Leeuwenhoek 21, 4 3 3 ^ 4 5 . Burns, R. 1988. Chromosome movement in vitro. Nature 331, 479. Burns, W.E. 1933. The taxonomic position of an aroma-producing mold. Iowa State Coll. J. Sci. 7, 4 3 3 ^ 3 7 . Burri, R., and W. Staub. 1909. Monilia nigra als Ursache eines Falles von Schwarzfleckigkeit bei Emmentalerkase. Landw. Jahrb. Schweiz 23,479-513. Buschke, A. 1895. Uber cine durch Coccidien hervorgerugene Krankheit des Menschen. Dtsch. Med. Wochenschr. 21, 14. Busse, O. 1894. Uber parasitare Zelleninschiisse und ihre Ziichtung. Zentralbl. Bakteriol. Parasitenkd. Infektionskr. Hyg. Abt. 1: Orig. Reihe A 16, 175-180. Bussey, H., and N. Skipper. 1975. Membrane-mediated killing of Saccharomyces cerevisiae by glycoproteins from Torulopsis glabrata. J. Bacteriol. 124, 476-^83. Bussey, H., and N. Skipper. 1976. Killing of Torulopsis glabrata by Saccharomyces cerevisiae killer factor. Antimicrob. Agents Chemother. 9, 352-354. Bussey, H., D. Saville, K. Hutchins and R.G.E. Palfree. 1979. Binding of yeast killer toxin to a cell wall receptor on sensitive Saccharomyces cerevisiae. J. Bacteriol. 140, 888-892. Bussey, H., W Sacks, D. Galley and D. Saville. 1982. Yeast killer plasmid mutations affecting toxin secretion and activity and toxin immunity function. Mol. Cell. Biol. 2, 346-354. Bussey, H., C. Boone, H. Zhu, T Vernet, M. Whiteway and D.Y. Thomas.

961

1990. Genetic and molecular approaches to synthesis and action of the yeast killer toxin. Experientia 46, 193-200. Buth, D.G. 1984. The application of electrophoretic data in systematic studies. Annu. Rev. Ecol. Syst. 15, 501-522. Butler, A.R., J.H. White and M.J.R. Stark. 1991. Analysis of the response of Saccharomyces cerevisiae cells to Kluyveromyces lactis toxin. J. Gen. Microbiol. 137, 1749-1757. Butler, E.E., and L.J. Petersen. 1972. Endomyces geotrichum, a perfect state of Geotrichum candidum. Mycologia 64, 365-374. Butler, E.E., D. Fogle and M. Miranda. 1988. Galactomyces citriaurantii, a newly found teleomorph of Geotrichum citri-aurantii, the cause of sour rot of citrus fruit. Mycotaxon 33, 197-212. Byers, B. 1981. Cytology of the yeast cycle. In: J.N. Strathern, E.W Jones and J.R. Broach (Eds.), The Molecular Biology of the Yeast Saccharomyces: Life Cycle and Inheritance, Cold Spring Harbor Laboratory, pp. 59-96. Byers, B., and L. Goetsch. 1974. Duplication of spindle plaques and integration of the yeast cell cycle. Cold Spring Harbor Symp. Quantit. Biol. 38, 123-131. Byers, B., and L. Goetsch. 1975. Behavior of spindles and spindle plaques in the cell cycle and conjugation oi Saccharomyces cerevisiae. J. Bacteriol. 124, 511-523. Byers, B., and L. Goetsch. 1976. A highly ordered ring of membraneassociated filaments in budding yeast, J. Cell Biol. 69, 717-721. Cabib, E. 1975. Molecular aspects of yeast morphogenesis. Annu. Rev. Microbiol. 29, 191-214. Cabib, E. 1981. Chitin: structure, metabolism, and regulation of biosynthesis. In: W. Tanner and FA. Loewes (Eds.), Encyclopedia of Plant Physiology, New Series, Vol. 13B. Springer, New York, pp. 3 9 5 413. Cabib, E., and B. Bowers. 1971. Chitin and yeast budding. J. Biol. Chem. 246, 152-159. Cabib, E., and V Farkas. 1981. The control of morphogenesis: an enzymatic mechanism for the initiation of septum formation in yeast. Proc. Natl. Acad. Sci. USA 68, 2052-2056. Cabib, E., M.S. Kang, B. Bowers, N. Elango, E. Mattia, M.L. Slater and J. Au-Young, 1984. Chitin synthesis in yeast, a vectorial process in the plasma membrane. In: C. Nombela (Ed.). Microbial Cell Wall Synthesis and Autolysis. Elsevier, Amsterdam, pp. 91-112. Cain, R.F. 1948. Myriogonium, a new genus among simplified Ascomycetes. Mycologia 40, 158-167. Cain, R.F. 1972. Evolution of the fungi. Mycologia 64, 1-14. Campbell, I. 1972. Numerical analysis of the genera Saccharomyces and Kluyveromyces. J. Gen. Microbiol. 73, 279-301. Campbell, I. 1973. Numerical analysis of Hansenula, Pichia and related yeast genera. J. Gen. Microbiol. 77, 4 2 7 ^ 4 1 . Capriotti, A. 1954. Recherches sur les levures de la fermentation vinaire en Italic. Antonie van Leeuwenhoek 20, 374-384. Capriotti, A. 1957. New blastomycetes isolated from soils of Spain I: Schwanniomyces castellii nov. spec. Arch. Mikrobiol. 26, 434-438. Capriotti, A. 1958a. Neue Hefen, isoliert aus Boden Spaniens II: Torulaspora franciscae nov. spec. Arch. Mikrobiol. 28, 238-243. Capriotti, A. 1958b. Torulaspora nilssoni nov. spec. A new yeast from Swedish soil. Arch. Mikrobiol. 28, 247-254. Capriotti, A. 1958c. Zygosaccharomyces mrakii nova species. A new yeast from silage. Arch. Mikrobiol. 30, 387-392. Capriotti, A. 1958d. Saccharomyces smittii nov. spec. A new yeast isolated from Dutch, Italian and Swedish soils. Antonie van Leeuwenhoek 24, 215-220. Capriotti, A. 1958e. Debaryomyces castellii nov. spec. (Eine neue Hefe aus Boden Schwedens). Arch. Mikrobiol. 28, 344-348. Capriotti, A. 1958f. Candida vanriji nova species, a new yeast from Swedish soils. Arch. Mikrobiol. 30, 226-230. Capriotti, A. 1958g. Torulopsis wickerhamii nova species. A new yeast from silage. Arch. Mikrobiol. 30, 383-384. Capriotti, A. 1959. The yeasts of certain soils from Sweden. LantbruksHogskol. Ann. 25, 185-220.

962

References

Capriotti, A. 1961a. Debaryomyces cantarellii nova species, a new yeast from Finnish soil. Arch. Mikrobiol. 39, 123-129. Capriotti, A. 1961b. Debaryomyces phaffii sp. n., a new yeast isolated from Finnish soil. J. Bacteriol. 82, 326-330. Capriotti, A. 1961c. Hansenula wickerhamii sp. n., a new yeast from Finnish soil. J. Bacteriol. 82, 359-360. Capriotti, A. 196Id. Torulopsis castellii sp. nov., a yeast isolated from Finnish soil. J. Gen. Microbiol. 26, 4 1 ^ 3 . Capriotti, A. 1961e. Torulopsis uartiouaarai sp. nov. A new yeast isolated from Finnish soil. Can. J. Microbiol. 7, 681-684. Capriotti, A. 1966. Saccharomyces castellii n. sp. Una nuova specie die lievito isolata da un terreno della Finlandia. Ann. Fac. Agric. Sassar 14, 4 5 3 ^ 5 9 . Capriotti, A. 1967. Saccharomyces seruazii n. sp. A new yeast from Finland soil. Ann. Microbiol. Enzimol. 17, 79-84. Capriotti, A. 1969. Torulaspora benedictae sp. n. A new yeast from sheep's milk in Sardinia, Italy. Ann. Microbiol. Enzimol. 19, 107114. Capriotti, A., and F. Fatichenti. 1969. Torulopsis arnaudii sp. n, A new yeast from Sardinian grapemust. Ann. Microbiol. Enzimol. 19, 115119. Carbajal, A.J. 1901. Estudio sobre el pulque, considerado principalmente desde el punto de vista zimotecnico. Bol. Soc. Agr. Mexicana 255. Caretta, G., G. Delfrate, A. Picco, A. Crippa and A. Mangiarotti. 1980. Relationship between Kluyveromyces fragilis, Candida pseudotropicalis and C. kefyr by means of crossed Immunoelectrophoresis. Microbiologica 3, 4 1 9 ^ 2 6 . Carlson, M. 1987. Regulation of sugar utilization in Saccharomyces species. J. Bacteriol. 169, 4873-4877. Camevale-Ricci, F. 1926. Fermenti e pseudofermenti parassiti e commensali delle cripte tonsillari. Colluna di Memorie di Otologia ecc. diretta dal Prof Calamida. No. 3, pp. 1-80, tav. I-V Soc. Albrighi e Segati, Milano (cited by Ciferri and Redaelli 1929). Carrau, F.M., E. Neirotti and O. Gioia. 1993. Stuck wine fermentations: effect of killer/sensitive yeast interactions. J. Ferment. Bioengin. 76, 67-69. Carter, A., and D. Malloch. 1982. A new species of Micropyxis (Leotiaceae). Mycologia 74, 346-348. Carter, B.L.A. 1978. The yeast nucleus. Adv Microb. Physiol. 17, 2 4 3 302. Cartwright, R.D., and G.E. Templeton. 1988. Biological limitations of Protomyces grauidus as a mycoherbicide for giant ragweed. Ambrosia trifida. Plant Dis. 72, 580-582. Carvalho-Silva, M., and I. Spencer-Martins. 1990. Modes of lactose uptake in the yeast species Kluyveromyces marxianus. Antonie van Leeuwenhoek 57, 77-81. Castellani, A. 1910. Observations on "tropical broncho-oidiosis". Br. Med. J. 2, 868-869. Castellani, A. 1911. Observations on fimgi of the genus Endomyces affecting man in the tropics. Zentralbl. Bakteriol. Parasitenkd., Abt. I, 58, 236-238. Castellani, A. 1912a. Observations on the fungi found in tropical bronchomycosis. Lancet 1, 13-15. Castellani, A. 1912b. Note on the importance of hyphomycetes and other ftingi in tropical pathology. Br. Med. J. 2, 1208-1212. Castellani, A. 1913. Further observations on the fringi of the genus Endomyces found in man. Arch. Parasitol. 16, 184-186. Castellani, A. 1914. Notes on the Hyphomycetes found in sprue, with remarks on the classification of fungi of the genus Monilia Gmelin. J. Trop. Med. Hyg. 17, 305-310. Castellani, A. 1915. Lectures on the higher fungi in relation to human pathology. Roy. Coll. Phys. London. Castellani, A. 1916. The plurality of species of the so-called "thrushfungus" (champignon du muguet) of temperate climates. Ann. Inst. Pasteur Paris 30, 149-154. Castellani, A. 1920. The etiology of thrush. J. Trop. Med. Hyg. 23, 17-22. Castellani, A. 1925. Notes on three new yeast-like organisms and a

new bacillus with remarks on the clinical conditions from which they have been isolated: fiirunculosis blastomycetica, stomatitis cryptococcobacillaris. J. Trop. Med. Hyg. 28, 217-223. Castellani, A. 1927. Fungi and frmgous diseases. Arch. Dermatol. Syph. 16, 383-425. Castellani, A. 1928. Blastomycosis and some other conditions due to yeast-like fungi (budding fungi). Am. J. Trop. Med. 8, 379-422. Castellani, A. 1929. A mannitol fermenting Monilia. Proc. Soc. Exp. Biol. Med. 26, 544-545. Castellani, A. 1932. A new variety of Geotrichum matalense (Geotrichum matalense var. Chapmani). J. Trop. Med. Hyg. 35, 2 7 8 279. Castellani, A. 1933. Blastomycosis, a short general account. Med. Press Circ. 136, 4 3 8 ^ 4 3 . Castellani, A. 1937a. A short general account for medical men of the genus Monilia. Trop. Med. Hyg. 40, 293-307. Castellani, A. 1937b. A preliminary report on two pathogenic fiingi: Trichophyton dankaliense n. sp. and Sporotrichum anglicum n. sp. J. Trop. Hyg. 40, 313-318. Castellani, A. 1940. Mycotic eczematous dermatitis of the toes probably due to Geotrichum rotundatum Cast. 1911, and Geotrichum rotundatum var. gallicum n.v. J. Trop. Med. Hyg. 43, 79-81. Castellani, A. 1960. A capsulated yeast producing black pigment: Cryptococcus ater n. sp. J. Trop. Med. Hyg. 63, 27-30. Castellani, A. 1963. Balanoposthitis chronica ulcerative cryptococcica. Dermatol. Trop. 2, 137-141. Castellani, A., and A.J. Chalmers. 1913. Manual of Tropical Medicine, 2nd edn. Bailliere, Tindal and Cox, London. Castellani, A., and A.J. Chalmers. 1919. Manual of Tropical Medicine, 3rd edn. Bailliere, Tindal and Cox, London. Castellani, A., and I. Jacono. 1933. Observations on fiingi isolated from cases of blastomycosis cutis and blastomycosis pulmonalis in North America and Europe. Remarks on blastomycetin. J. Trop. Med. Hyg. 36, 297-321. Castellani, A,, and G.C. Low, 1913. The role played by fiingi in sprue. J. Trop. Med. Hyg. 16, 33-35. Castellani, A., and RE. Taylor. 1925. Further observations on vaginal monilias and vaginal moniliases. J. Trop. Med. Hyg. 28, 242-249. Castellani, A., M. Douglas and T. Thompson. 1921. Notes on certain forms of bronchitis clinically resembling tuberculosis: bronchohemisporosis, bronchomoniliasis, bronchoanaeromycosis. J. Trop. Med. Hyg. 24, 149-152. Castelli, T 1932. Due nuove Torulopsidacee a pigmento rosso rosa. G. Biol. Appl. Ind. Chim. Alim. 2, 1-13. Castelli, T. 1933. Su alcune Hansenula della fermentazione panaria. Arch. Mikrobiol. 4, 514-529. Castelli, T. 1935. Su alcuni blastomiceti dei mosti umbri. Boll. 1st. Sieroter. Milan. 9, 911-916. Castelli, T. 1938. Nuovi blastomiceti isolati da mosti del chianti e zone limitrofe. Arch. Mikrobiol. 9, 4 4 9 ^ 6 8 . Castelli, T. 1940. Considerazioni sulla Torulopsis pulcherrima. Arch. Mikrobiol. 11, 127-136. Castelli, T. 1942. Una nuova specie di Saccharomycodes: Saccharomycodes bisporus. Arch. Mikrobiol. 12, 260-265. Castelli, T 1948. I lieviti della fermentazione vinaria nella regione Pugliese. Ric. Sci. 18, 3-31. Centers for Disease Control. 1991. HIV/AIDS Surveillance Report. Jan. 1-22, U.S. Dept. Health Human Ser. Publ. CDC, Atlanta, GA. Chalutz, E., and C.L. Wilson. 1990. Postharvest biocontrol of green and blue mold and sour rot of citrus fiiiit by Debaryomyces hansenii. Plant Dis. 74, 134-137. Chang, S., L. Yang and H. Wang. 1963. Studies on the production of glycerol and arabitol by osmophilic yeasts. II. Arabitol production by Hansenula arabitogenes Fang. Acta Microbiol. Sin. 9, 134-139. Chang, Y.C., and K.J. Kwon-Chung. 1994. Complementation of a capsule-deficient mutation of Cryptococcus neoformans restores its virulence. Mol. Cell. Biol. 14, 4 9 1 2 ^ 9 1 9 . Chang, Y.C., L.A. Penoyer and K.J. Kwon-Chung. 1996. The second

References capsule gene of Cryptococcus neoformans, CAP64, is essential for virulence. Infect. Immun. 64, 1977-1983. Channon, A.G. 1956. Association of a species of Itersonilia with parsnip canker in Great Britain. Nature (London) 178, 217. Channon, A.G. 1963. Studies on parsnip canker I. The cause of the diseases. Ann. Appl. Biol. 51, 1-15. Chaskes, S., and R.L. Tyndall. 1975. Pigment production by Cryptococcus neoformans from para- and or^/io-diphenols: effect of the nitrogen source. J. Clin. Microbiol. 1, 509-514. Chaskes, S., and R.L. Tyndall. 1978. Pigment production by Cryptococcus neoformans and other Cryptococcus species from aminophenols and diaminobenzenes. J. Clin. Microbiol. 7, 146-152. Chatton, E.R. 1913. Coccidiascus legeri n.g., n. sp. levure ascosporee parasite des cellules intestinales de Drosophila funebris Fabr. C.R. Soc. Biol. 75, 117-120. Chen, S.L., and H.J. Peppier. 1978. Single-cell proteins in food applications. Dev. Ind. Microbiol. 19, 79-94. Chen, X.J., M. Wesolowski-Louvel, C. Tanguy-Rougeau, M.M. Blachii, L. Fabiani, M. Saliola, C. Falcone, L. Frontali and H. Fukuhara. 1988. A gene-cloning system for Kluyveromyces lactis and isolation of a chromosomal gene required for killer toxin production. J. Basic Microbiol. 28,211-220. Chernov, LYu., and LP. Bab'eva. 1988. A new species of Cryptococcus yeast from tundra soil. Mikrobiologiya 57, 1031-1034. Chia, J.K.S., S.M. Chan and H. Goldstein. 1995. Baker's yeast as adjunctive therapy for relapses of Clostridium difficile diarrhoea. Clin. Infect. Dis. 20, 1581. Chirgwin, J.M., A.E. Przybyla, R.L MacDonald and W.L Rutter. 1979. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 18, 5284-5299. Chodat, R. 1913. Monographies d'algue en culture pure. Beitr. Kryptogamenflora Schweiz 4, 121. Choi, E.H., H.C. Chang and E.Y. Chung. 1990. Isolation and identification of wild killer yeast Candida dattila. Sanop Misaenqmul Hakhoechi 18, 1-5. Christensen, i.i. 1963. Com smut caused by Ustilago maydis. Am. Phytopathol. Soc. Monogr. 2, 1^1. Christensen, W.B. 1946. Urea decomposition as a means of differentiating Proteus and Paracolon cultures from each other and from Salmonella and Shigella type. L Bacteriol. 52, 461^66. Christiansen, C, A.L. Bak, A. Stenderup and G. Christiansen. 1971. Repetitive DNA in yeast. Nature (London) New Biol. 231, 176-177. Chuck, S.L., and M.A. Sande. 1989. Infections with Cryptococcus neoformans in the acquired immunodeficiency syndrome. N. Engl. L Med. 321, 794-799. Ciani, M., and G. Rosini. 1987. Definizione dell'indice di moltiplicazione della CO2 nella valutazione, per via ponderale, della capacita alcoligena di un lievito. Ann. Fac. Agrar. Univ. Perugia 41, 753-762. Ciferri, R. 1930a. Contribuzioni alia sistematica delle Torulopsidaceae II-XIV Arch. Protistenkd. 71, 405^52. Ciferri, R. 1930b. Contribuzioni alia sistematica doiVOidium matalense Castellani. Arch. Protistenkd. 71, 436^43. Ciferri, R. 193 la. Contributions to the classification of Torulopsidaceae I. An American variety of the Torulopsis minuta. Mycologia 23, 140146. Ciferri, R. 1931b. Studies on cacao. I. Actinomycetes on cacao beans. L Dep. Agric. R R. 15, 223-286. Ciferri, R. 1955a. Tassonomia e nomenclatura dell'agente del "Marciume acido" dei frutti di agrume. Ann. Sper. Agrar. Roma, N.S. 9, 5-10. Ciferri, R. 1955b. A provisional key to the genera of anascosporogenous yeasts and alhed fiingi. An. Soc. Biol. Pernambuco 13, 130-142. Ciferri, R. 1960. Manuale di Micologie Medica, Vol. 2, 2nd edn. Renzo Cortina, Pavia, Italy. Ciferri, R., and LD. Alfonseca. 1931. A new variety of Blastodendrion intestinale Mattl. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 83, 273276. Ciferri, R., and B.K. Ashford. 1929. A new species of Blastodendrion. Porto Rico L Publ. Health Trop. Med. 5, 91-105.

963

Ciferri, R., and P. Redaelli. 1925. Monografia delle Torulopsidaceae a pigmento rosso. Atti 1st. Bot. R. Univ Pavia, Ser. Ill, 2, 147-303. Ciferri, R., and P. Redaelli. 1929. Studies on the Torulopsidaceae, a trial general systematic classification of the asporogenous ferments. Ann. Mycol. 27, 243-295. Ciferri, R., and P. Redaelli. 1935. Contribuzione alia sistematica delle Torulopsidaceae. XV-XXXIII. Arch. Mikrobiol. 6, 9-72. Ciferri, R., and P. Redaelli. 1947. Reisolamento del Mycoderma glutinisfarinulae Desm., e proposta del cambiamento del nome generico di Mycoderma Leberle in Mycokluyveria nobis. Mycopathologia 4, 5459. Ciferri, R., A. Montemartini and O. Ciferri. 1957. Caratteristiche morfologiche e assimilative e speciologia della Protothecae. Nuovi Ann. Ig. Microbiol. 8, 554-563. Cimerman, A., and A. Kockova-Kratochvilova. 1984. Pichia labacensis n. sp. Z. Allg. Mikrobiol. 24, 219-222. Clark, PS., R.H. Wallace and }.}. David. 1954. Yeasts occurring on apples and in apple cider. Can. L Microbiol. 1, 145-149. Clark-Walker, G.D. 1989. The genome of Bakers yeast - the benchmark for a eukaryotic cell. In: A. Martini and A. Vaughan-Martini (Eds.), Yeast as a Main Protagonist of Biotechnology, Proc. 7th Int. Symp. on Yeast. Yeast 5, 247-254. Clark-Walker, G.D., R Hoeben, A. Plazinska, D.K. Smith and E.H. Wimme. 1987. Application of mitochondrial DNA analysis to yeast systematics. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 259-266 (Stud. Mycol. 30, 259-266). Clements, EE., and C.L. Shear. 1931. The Genera of Fungi. W.H. Wilson, New York. Cochet, G. 1940. Recherches sur la flore mycologique de I'intestin des rongeurs domestiques. Thesis. Poulet-Malassis, Alengon. Codreanu, R., and D. Codreanu-Balcescu. 1981. On two Metschnikowia yeast species producing hemocoelic infections in Daphnia magna and Anemia salina (Crustacea, Phyllopoda) from Rumania. L Invert. Pathol. 37, 22-27. Cohn, F. 1872. Untersuchungen iiber Bakterien. Beitr. Biol. Pflanz. (Heft 2), 127-224. Cole, G.E., PC. McCabe, D. Inlow, D.H. Gelfand, A. Ben-Bassat and M.A. Innis. 1988. Stable expression of Aspergillus awamori glucoamylase in distillers yeast. Bio/Technology 6, 417^21. Cole, G.T. 1975. A preparatory technique for examination of imperfect fiingi by scanning electron microscopy. Cytobios 12, 115-121. Cole, G.T. 1986. Models of cell differentiation in conidial fiingi. Microbiol. Rev 50, 95-132. Cole, G.T, and Y. Nozawa. 1981. Dimorphism. In: G.T. Cole and E. Kendrick (Eds.), Biology of Conidial Fungi, Vol. I. Academic Press, New York, pp. 97-133. Cole, G.T, and R.A. Samson. 1979. Patterns of Development in Conidial Fungi. Pitman Publishing Ltd., London. Collins, M.D., and D. Jones. 1981. A note on the separation of natural mixtures of bacterial ubiquinones using reverse-phase partition thinlayer chromatography and high performance liquid chromatography. X Appl. Bacteriol. 51, 129-134. Commerford, S.L. 1971. lodination of nucleic acids in vitro. Biochemistry 10, 1993-1999. Conte, M.V, andR.S. Pore. 1973. Taxonomic imphcations of Prototheca and Chlorella cell wall polysaccharide characterization. Arch. Mikrobiol. 92, 227-233. Conti, S.F, and TD. Brock. 1965. Electron microscopy of cell fusion in conjugating Hansenula wingei. L Bacteriol. 90, 524-533. Cook, R., and A. Cook. 1975. The attractiveness to males of female Drosophila melanogaster: effects of mating, age, and diet. Anim. Behav 23, 521-526. Cooke, W.B. 1966. A note on Cryptococcus ater Castellani. Mycopathol. Mycol. Appl. 30, 349-352. Cooke, W.B. 1968. Studies in the genus Prototheca. II. Taxonomy. J. Ehsha Mitchell Sci. Soc. 84, 217-220. Cooney, C.L., and D.W Levine. 1975. SCP production from methanol

964

References

by yeast. In: S.R. Tannenbaum and D.I.C. Wang (Eds.), Single-Cell Protein II. The MIT Press, Cambridge, MA, pp. 4 0 2 ^ 2 3 . Corda, A.C.J. 1842. Icones fiingorum hucusque cognitorum, Vol. 3. Pragae. Cordro'ch, M. 1937. Nouvelle espece de levure du genre Zygosaccharomyces: Z. ashbyii. Ann. Ferment. 3, 87-104. Costantin, M.J. 1901. Sur les levures des animaux. Bull. Soc. Mycol. France 17, 145-148. Cottini, G.B. 1939. Un caso di "Lingua nigra et pilosa" con isolamento di Mycotorula guilliermondi (Cast.) n. comb. Mycopathologia 2, 75-79. Cottrell, M., and J.L.F. Kock. 1989. The yeast family Lipomycetaceae Novak et Zsolt emend, van der Walt et al. and the genus Myxozyma van der Walt et al. 1. A historical account of its delimitation and 2. The taxonomic relevance of cellular long-chain fatty acid composition and other phenotypic characters. Syst. Appl. Microbiol. 12, 291-305. Cottrell, M., and J.L.F. Kock. 1990. An electrophoretic karyotype comparison of the yeast genera Dipodascopsis Batra et Millner, Lipomyces Lodder et Kreger-van Rij, Myxozyma van der Walt et von Arx (1990). Syst. Appl. Microbiol. 13, 136-141. Cottrell, M., B. Viljoen, J.L.F Kock and P Lategan. 1986. The longchain fatty acid compositions of species representing the genera Saccharomyces, Schwanniomyces and Lipomyces. J. Gen. Microbiol. 132, 2401-2403. Couch, J.N. 1938. The Genus Septobasidium. Univ. North Carolina Press, Chapel Hill, NC, 480pp. Cox, D.E. 1976. A new homobasidiomycete with anomalous basidia. Mycologia 68, 481-510. Crandall, M.A., and T.D. Brock. 1968. Molecular basis of mating in the yeast Hansenula wingei. Bacteriol. Rev. 32, 139-163. Crandall, M.A., R. Egel and VL. Mackay. 1977. Physiology of mating in three yeasts. Adv. Microb. Physiol. 15, 307-398. Crane, J.L., and J.D. Schoknecht. 1978. Rogersomyces, a new genus in the Filobasidiaceae (Homobasidiomycetes) from an aquatic habit. Am. J. Bot. 65, 902-906. Cregg, J.M., T.S. Vedvick and WC. Raschke. 1993. Recent advances in the expression of foreign genes in Pichia pastoris. Bio/Technology 11,905-910. Crook, E.M., and I.R. Johnston. 1962. The qualitative analysis of the cell walls of selected species of fiingi. Biochem. J. 83, 325-331. Crook, W.G. 1986. The Yeast Connection. Vintage Books, New York, 434pp. Crosa, J.H., J.D. Brenner and S. Falkow 1973. Use of a singlestrand specific nuclease for analysis of bacterial and plasmid deoxyribonucleic acid homo- and heteroduplexes. J. Bacteriol. 115, 904-911. Cross, F. 1988. Conjugation in Saccharomyces cereuisiae. Annu. Rev. Cell Biol. 4, 4 2 9 ^ 5 7 . Cryer, D.R., R. Eccleshall and J. Marmur. 1975. Isolation of yeast DNA. In: D.M. Prescott (Ed.), Methods in Cell Biology, Vol. 12, Yeast Cells. Academic Press, New York, pp. 3 9 ^ 4 . Curry, K.J. 1985. Ascosporogenesis in Dipodascopsis tothii (Hemiascomycetidae). Mycologia 77, 4 0 1 ^ 1 1 . Custers, M.Th.J. 1940. Onderzoekingen over het gistgeslacht Brettanomyces, Thesis. Delft University of Technology. Czymmek, K.J., and T.M. Hammill. 1989. Electron microscopy of ascosporogenesis in the sexual yeast Schizosaccharomyces octosporus. Mycol. Soc. Am. Newsletter 40, 26. da Fonseca, O.O.R, 1922. Sobre os agentes das blastomycoses europeas. Cyclo sexuado e posigao do levedo de Hudelo. Bras. Med. 36, 101. (Rev in: Bull. Inst. Pasteur 21, 651.) da Fonseca, O.O.R., and A.E. de Area Leao. 1929. Sobre o agente da proteomycose. Bras. Med. 43, 667. Dangeard, PA. 1906. Les ancestres des champignons superieurs. Botaniste 9, 263-303. Daniel, A.E. 1983. Comparisons of yeasts in the genus Candida using molecular biological technology, MS Thesis. Georgia State University, Atlanta, GA.

Danker, W.M., S.A. Spector, J. Fierer and C.E. Davis. 1987. Malassezia fiingemia in neonates and adults: complication of hyperalimentation. Rev Infect. Dis. 9, 743-753. Dastur, J.F, and J. Singh. 1930. A new Nematospora on cotton bolls in the Central Provinces (India). Ann. Mycol. 28, 291-296. Daszewska, W 1912. Etude sur la desagregation de la cellulose dans la terre de bruyere et la tourbe. Bull. Soc. Bot. Geneve, Ser. 2, 4, 255-316. Davenport, R.R. 1980a. An introduction to yeasts and yeast-like organisms. In: FA. Skinner, S.M. Passmore and R.R. Davenport (Eds.), Biology and Activities of Yeasts. The Society for Applied Bacteriology Symposium Series No. 9. Academic Press, London, pp. 1-27. Davenport, R.R. 1980b. An outline guide to media and methods for studying yeasts and yeast-like organisms. In: FA. Skinner, S.M. Passmore and R.R. Davenport (Eds.), Biology and Activities of Yeasts. The Society for Applied Bacteriology Symposium Series No. 9. Academic Press, London, pp. 261-263. Davies, R.R. 1987. Blastospores. J. Med. Vet. Mycol. 25, 187-190. Davis, B.J. 1964. Disc electrophoresis. II. Method and application to human serum proteins. Ann. N.Y Acad. Sci. 121, 4 0 4 ^ 2 7 . Davis, J.J. 1907. A new species of Protomyces. J. Mycol. 13, 188-189. Davis, R.R., H. Spencer and P.O. Wakelin. 1964. A case of human protothecosis. Trans. R. Soc. Trop. Hyg. 58, 448-451. de Almeida, F P 1929. Estudo comparativo do granuloma coccidioidico nos Estados Unidos e no Brasil. An. Fac. Med. Sao Paulo 4, 91-98. de Almeida, FP. 1930. Estudo comparativo do granuloma coccidioidico nos Estados Unidos e no Brasil. Novo genero para o parasito brasileiro. An. Fac. Med. Sao Paulo 5, 125-141. de Almeida, FP. 1933. As blastomycoses no Brasil. An. Fac. Med. Sao Paulo 9, 69-163. de Araujo, F V , C.A.G. Soares, A.N. Hagler and L.C. Mendonga-Hagler. 1995. Ascomycetous yeast communities of marine invertebrates in a Southeast Brazilian mangrove ecosystem. Antonie van Leeuwenhoek 68, 91-99. de Area Leao, A.E. 1940. Consideragoes sobre os Thallosporados. O genero Trichosporon. Trichosporon minor n. sp. produtor da piedra axilar. Mem. Inst. Oswaldo Cruz 35, 729-745. de Beurmann, L., and H. Gougerot. 1909. Les exascoses, saccharomycoses (mycose de Busse-Buschke) et parasaccharomycoses. Zymonematoses (mycose de Gilchrist). Parendomycoses et endomycoses (muguet). Bull. Mem. Soc. Med. Hop. Paris 28, 250-263. de Beurmann, L., and H. Gougerot. 1910. Les nouvelles Mycoses. Masson, Paris. De Camargo, R., and H.J. Phaflf. 1957. Yeasts occurring in drosophila flies and in fermenting tomato fi-uits in Northern California. Food Res. 22, 367-372. de Hoog, G.S. 1974. The genera Blastobotrys, Sporothrix, Calcarisporium and Calcarisporiella gen. nov. Stud. Mycol. 7, 1-84. de Hoog, G.S. 1977. Rhinocladiella and allied genera. Stud. Mycol. 15, 1-140. de Hoog, G.S. 1979a. Taxonomic review of Moniliella, Trichosporonoides and Hyalodendron. Stud. Mycol. 19, 1-36. de Hoog, G.S. 1979b. The taxonomic position of Moniliella, Trichosporonoides and Hyalodendron - an essay. Stud. Mycol. 19, 81-90. de Hoog, G.S. 1982. Morphology of anamorphs 11. Sporidiobolus and Sporobolomyces. Stud. Mycol. 22, 10-14. de Hoog, G.S. 1992. Sporothrix-like anamorphs of Ophiostoma species and other fiingi. In: M.J. Wingfield, K.A. Seifert and J.F. Webber (Eds.), Ceratocystis and Ophiostoma: Taxonomy, Ecology and Pathology. American Pathological Society, St. Paul, pp. 53-60. de Hoog, G.S., and T. Boekhout. 1982. Teliospores, teliospore-mimics and chlamydospores. Stud. Mycol. 22, 15-22. de Hoog, G.S., and O. Constantinescu. 1981. A new species of Sporothrix from calf skin. Antonie van Leeuwenhoek 47, 367-370. de Hoog, G.S., and G.A. de Vries. 1973. Two new species of Sporothrix

References and their relation to Blastobotrys nivea. Antonie van Leeuwenhoek 39,515-520. de Hoog, G.S., and A.H.G. Gerrits van den Ende. 1992. Nutritional pattern and eco-physiology of Hortaea werneckii, agent of human tinea nigra. Antonie van Leeuwenhoek 62, 321-329. de Hoog, G.S., and J. Guarro. 1995. Atlas of Clinical Fungi. Centraalbureau voor Schimmelcultures/Universitat Rovira i Virgili, Baam/Reus. de Hoog, G.S., and E. Gueho. 1984. Deoxyribonucleic acid base composition and taxonomy of Moniliella and allied genera. Antonie van Leeuwenhoek 50, 135-141. de Hoog, G.S., and C. Rubio. 1982. A new dematiaceous fungus from human skin. Sabouraudia 20, 15-20. de Hoog, G.S., and M.Th. Smith. 1981. Hyphozyma, a new genus of yeast-like Hyphomycetes. Antonie van Leeuwenhoek 47, 339-352. de Hoog, G.S., and M.Th. Smith. 1986. Key to the species of Hyphozyma (yeast-like Hyphomycetes) and description of //. roseonigm sp. nov. Antonie van Leeuwenhoek 52, 39^4. de Hoog, G.S., and N.A. Yurlova. 1994. Conidiogenesis, nutritional physiology and taxonomy of Aureobasidium and Hormonema. Antonie van Leeuwenhoek 65, 41-54. de Hoog, G.S., A.H. Rantio-Lehtimaki and M.Th. Smith. 1985. Blastobotrys, Sporothrix and Trichosporiella: generic delimitation, new species, and a Stephanoascus teleomorph. Antonie van Leeuwenhoek 51, 79-109. de Hoog, G.S., M.Th. Smith and E. Gueho. 1986. A revision of the genus Geotrichum and its teleomorphs. Stud. Mycol. 29, 1-131. de Hoog, G.S., A.H.G. Gerrits van den Ende, J.M.J. Uijthof and W.A. Untereiner. 1995. Nutritional physiology of type isolates of currently accepted species of Exophiala and Phaeococcomyces. Antonie van Leeuwenhoek 68, 43-49. de Hoog, G.S., E. Gueho and M.Th. Smith. 1997a. Nomenclatural notes on some arthroconidial yeasts. Mycotaxon 63, 345-347. de Hoog, G.S., C. Boos, A.H.G. Gerrits van den Ende, J.M.J. Uijthof and J. Gene. 1997b. Taxonomy of meristematic black yeasts. Mycotaxon (in preparation), de la Pena, R, E Barros, S. Gascon, RS. Lazo and S. Ramos. 1981. The effect of yeast killer toxin on sensitive cells of Saccharomyces cerevisiae. J. Biol. Chem. 256, 10420-10425. de Lagerheim, G. 1892. Dipodascus albidus, eine neue, geschlechtliche Hemiascee. Jahrb. Wiss. Bot. 24, 549-565. de Lagerheim, N.G. 1898. Mykologische Studien L Beitrage zur Kenntnis der parasitischen Pilze 1-3. Beih. K. Svenska Vet.-Akad. Handl. 24, 1-21. De Ley, J., H. Cattoir and A. Reynaerts. 1970. The quantitative measurement of DNA hybridization from renaturation rates. Eur. J. Biochem. 12, 133-142. de Lima, S.M., and L.A. Aciole de Queiroz. 1972. Uma nova especie de Trichosporon Behrend. Inst, de Micologia da Univ. Fed. de Pemambuco, Publicagao No. 690, 1-8. de Magalhaes, O. 1914. Mycose pulmonar ''Oidium pulmoneum" n. sp. Bras. Med. 28, 341-342. de Magalhaes, O. 1918. Nova micose humana. Estudo sobre a morfolojia e biolojia do Oidium brasiliense, n. sp., agente etilojico de uma nova molestia do homem. Mem. Inst. Oswaldo Cruz 10, 20-57. de Magalhaes, O. 1932. A classificagao do Oidium brasiliense, Neogeotrichum pulmoneum, n.g. (O. Magelhaes, 1914), emend. O. Magelhaes, 1931. Mem. Inst. Oswaldo Cruz 26, 151-167. De Mot, R., and H. Verachtert. 1984. Biocatalysis and biotechnology with yeasts. ASM News 50, 526-531. De Mot, R., and H.S. Verachtert. 1985. Purification and characterization of extracellular amylolytic enzymes from the yeast Filobasidium capsuligenum. Appl. Environ. Microbiol. 50, 1474-1482. de Rossi, G. 1917. I micodermi del vino. Sta. Sper. Agrar. Ital. 50, 529-562. de Rossi, G. 1920. I lieviti apiculati nella fermentazione vinaria. Sta. Sper. Agrar. Ital. 53, 233-297.

965

De Vroey, C, and F. Gattii. 1989. Cryptococcus neoformans var. gattii Vanbreuseghem and Takashio (1970), Mykosen 32, 675. De Wachter, R., J.-M. Neefs, A. Goris and Y. Van de Peer. 1992. The gene coding for small ribosomal subunit RNA in the basidiomycete Ustilago maydis contains a group I intron. Nucleic Acids Res. 20, 1251-1257. Degre, R., D.Y. Thomas, J. Frenette and K. Mailhiot. 1989. Identification de souches de levures oenologiques par la caracterisation de leur ADN a I'aide de sondes moleculaires specifiques. Rev. Fr. Oenologie 119, 23-26. Deinema, M.H. 1961. Intra- and extra-cellular lipid production by yeasts. Meded. Land-bouwhogeschool, Wageningen 61, 1-54. Delcourt, A., and E. Guyenot. 1910. De la possibilite d'etudier certains Dipteres en milieu defini. C.R. Hebd. Seances Acad. Sci. D. Sci. nat. 151,255-257. Delitsch, H. 1943. Systematik der Schimmelpilze. In: A. Lembke (Ed.), Ergebnisse der angewandten Mikrobiologie I. J. Neumann, Neudamm, 175pp. Demain, A.L. 1972. Riboflavin oversynthesis. Annu. Rev. Microbiol. 26, 369-388. Demme, R. 1889. Saccharomyces ruber Ann. Micrographie 2, 555-556. den Dooren de Jong, L.E. 1927. Een nieuwe, vetvormende gist. Ned. Tijdschr. Hyg. Microbiol. Serol. 1, 136-148. Denhardt, D.T. 1966. A membrane filter technique for the detection of complementary DNA. Biochem. Biophys. Res. Commun. 23, 641646. Denton, J.F., and A.F. DiSalvo. 1968. The prevalence of Cryptococcus neoformans in various natural habitats. Sabouraudia 6, 213-217. Derx, H.G. 1930. Etude sur les Sporobolomycetes. Ann. Mycol. 28, 1-23. Derx, H.G. 1948. Itersonilia nouveau genre de Sporobolomycetes a mycelium boucle. Bull. Bot. Gardens, Buitenzorg, Ser. Ill, 17, 465472. Desmazieres, J.B. 1827. Recherches microscopiques et physiologiques sur le genre Mycoderma. Ann. Sci. Nat. 10, 42-67. di Menna, M.E. 1954a. Debaryomyces marama n. sp., isolated from the air. J. Gen. Microbiol. 10, 65-67. di Menna, M.E. 1954b. Cryptococcus terreus n. sp. from soil in New Zealand. J. Gen. Microbiol. 11, 195-197. di Menna, M.E. 1955a. A search for pathogenic species of yeasts in New Zealand soils. J. Gen. Microbiol. 12, 54-62. di Menna, M.E. 1955b. A quantitative study of airborne fungus spores in Dunedin, New Zealand. Trans. Br. Mycol. Soc. 38, 119-129. di Menna, M.E. 1958a. Two new species of yeasts from New Zealand. J. Gen. Microbiol. 18, 269-272. di Menna, M.E. 1958b. Torulopsis ingeniosa n. sp., from grass leaves. J. Gen. Microbiol. 19, 581-583. di Menna, M.E. 1960. Biological studies of some tussock-grassland soils. XIV. Yeasts of two cultivated soils. N.Z. J. Agric. Res. 3(2), 207-213. di Menna, M.E. 1965a. Yeasts in New Zealand soils. N.Z. J. Bot. 3, 194-203. di Menna, M.E. 1965b. Schizoblastosporion starkeyi-henricii Ciferri. Mycopathol. Mycol. Appl. 25, 205-212. di Menna, M.E. 1966a. Three new yeasts from Antarctic soils: Candida nivalis, Candida gelida, and Candida frigida spp. n. Antonie van Leeuwenhoek 32, 25-28. di Menna, M.E. 1966b. Yeasts in Antarctic soils. Antonie van Leeuwenhoek 32, 29-38. Diddens, H.A. 1934. Eine neue Pilzgattung, Hyalodendron. Zentralbl. Bakteriol. Parasitenkd. Abt. 2, 90, 315-319. Diddens, H.A., and J. Lodder. 1939. On some sporogenous yeasts and their imperfect stages. Mycopathologia 2, 28-36. Diddens, H.A., and J. Lodder. 1942. Die anaskosporogenen Hefen, II. Halfte. North-Holland, Amsterdam. Diederich, P. 1986. Lichenicolous frmgi from the Grand Duchy of Luxembourg and surrounding areas. Lejeunia 119, 1-25. Diederich, P. 1996. The Lichenicolous Heterobasidiomycetes, Bibliotheca Lichenologica, Vol. 61. J. Cramer, Berlin, 198pp.

966

References

Dietrichson, E. 1954. Etude d'une collection norvegienne de levures. Ann. Parasitol. Hum. Comp. 29, 271-288, 460-498. Dill, I., C. Ramirez and A. Gonzalez. 1984. Candida lignophila sp. nov., a new basidiomycetous yeast anamorph from rotting wood of Drymis winteri. Antonie van Leeuwenhoek 50, 219-225. Ding, R., K.L. McDonald and J.R. Mcintosh. 1993. Three-dimensional reconstruction and analysis of mitotic spindles from the yeast Schizosaccharomyces pombe. J. Cell Biol. 120, 141-151. Ditlevsen, E., and A. Hjort. 1964. Hanseniaspora pijperi (van der Walt et Tscheuschner) nov. comb. C.R. Trav. Lab. Carlsberg 34, 347-357. Dittrich, H.H. 1964. Die alkoholische Vergarung der L-Apfelsaure durch Schizosaccharomyces pombe var. acidodevoratus. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 118, 406-421. Djaczenko, W., and A. Cassone. 1971. Visualization of new ultrastructural components in the cell wall of Candida albicans with fixatives containing TAPO. J. Cell Biol. 52, 186-190. do Carmo-Sousa, L. 1965. Trichosporon penicillatum sp. n. Antonie van Leeuwenhoek 31, 153-156. do Carmo-Sousa, L. 1969a. Distribution of yeasts in nature. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, 1st edn., Vol. I. Academic Press, New York, pp. 79-105. do Carmo-Sousa, L. 1969b. Endospore formation in the genus Trichosporon. In: A. Kockova-Kratochvilova (Ed.), Proc. 2nd Symp. on Yeasts, 1966, Bratislava, pp. 87-92. do Carmo-Sousa, L. 1970a. Nematospora Peglion. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 441-447. do Carmo-Sousa, L. 1970b. Oosporidium Stautz. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 1161-1166. do Carmo-Sousa, L., and H.J. Phaff. 1962. An improved method for the detection of spore discharge in the Sporobolomycetaceae. J. Bacteriol. 83, 434-435. do Carmo-Sousa, L., and N. van Uden. 1967. Reisolation of Sarcinomyces inkin and its transfer to the genus Trichosporon. Mycologia 59, 653-657. Dobzhansky, T. 1976. Organismic and molecular aspects of species formation. In: F.J. Ayala (Ed.), Molecular Evolution. Sinauer, Sunderland, MA, pp. 95-105. Dodge, C.W. 1935. Medical Mycology. Fungous Diseases of Men and Other Mammals. Mosby, St. Louis. Dodge, C.W., and M. Moore. 1936. Morphology, physiology and cytology of Syringospora inexorabilis (Monilia inexorabilis). Ann. Missouri Bot. Card. 23, 129-150. Dombrowski, W. 1910. Die Hefen in Milch und Milchprodukten. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 28, 3 4 5 ^ 0 3 . Domsch, K.H., W. Gams and T.-H. Anderson. 1980. Compendium of Soil Fungi. Academic Press, London. Donk, M.A. 1973a. The heterobasidiomycetes: a reconnaissance III. How to recognize a basidiomycete? Proc. Ned. Akad. Wet. Amsterdam (Ser. C) 76, 1-22. Donk, M.A. 1973b. The heterobasidiomycetes: a reconnaissance IV Proc. Ned. Akad. Wet. Amsterdam (Ser. C) 76, 109-125. Donk, M.A. 1973c. The heterobasidiomycetes: a reconnaissance V Proc. Ned. Akad. Wet. Amsterdam (Ser. C) 76, 126-140. Dooms, L., G.L. Hennebert and H. Verachtert. 1971. Polyol synthesis and taxonomic characters in the genus Moniliella. Antonie van Leeuwenhoek 37, 107-118. Dorfler, C. 1990. Vergleichende Untersuchungen zum biochemischen Aufbau der Zellwand an Hefestadien von niederen und hoheren Basidiomyceten. Bibl. Mycol. 129, 1-163. Doubles, J.C, and D.J. McLaughlin. 1991. A new basidiomycetous septal type: the multiperforate septum in Kriegeria eriophori. Am. J. Bot. 78, 1542-1548. Doubles, J.C, and D.J. McLaughlin. 1992. Basidial development, life history, and the anamorph of Kriegeria eriophori. Mycologia 84, 6 6 8 678. Douglas, C M . , S.L. Sturley and K.A. Bostian. 1988. Role of protein

processing, intracellular trafficking and endocytosis in production and immunity to yeast killer toxin. Eur. J. Epidemiol. 4, 400-408. Drawert, K, and R.G. Berger. 1984. The use of microorganisms and plant cell cultures for the production and biosynthesis of aroma substances. In: Proc. EBC-Symp. on Biotechnology, Great Britain, 1983, EBCMonograph IX. Brauwelt-Verlag, Numberg, Germany, pp. 122-143. Droby, S., E. Chalutz, C L . Wilson and M. Wisniewski. 1989. Characterization of the biocontrol activity of Debaryomyces hansenii in the control of Penicillium digitatum on grapefruit. Can. J. Microbiol. 35, 7 9 ^ 8 0 0 . du Preez, J.C, and J.R van der Walt. 1983. Fermentation of D-xylose to ethanol by a strain of Candida shehatae. Biotechnol. Lett. 5, 357-362. Dubos, R.J. 1976. Louis Pasteur, free lance of science. Schribner's, New York, 420pp. Dufait, R., R. Velho and C De Vroey 1987. Rapid identification of the two varieties of Cryptococcus neoformans by D-proline assimilation. Mykosen 30, 483. Dupont, P.F., and L.R. Hedrick. 1971. Deoxyribonucleic acid base composition and numerical taxonomy of yeasts in the genus Trichosporon. J. Gen. Microbiol. 66, 349-359. Duran, R., and P.M. Gray. 1989. Nuclear DNA, an adjunct to morphology in fungal taxonomy. Mycotaxon 36, 205-219. Duran, R., and K.M. Safeeula. 1968. Aspects of teliospore germination in North American smut fungi. I. Mycologia 60, 231-243. Dwidjoseputro, D., and FT. Wolf 1970. Microbiological studies of Indonesian fermented foodstuffs. Mycopathol. Mycol. Appl. 41, 2 1 1 222. Dykstra, M.J. 1974. Some ultrastructural features in the genus Septobasidium. Can. J. Bot. 52, 971-972. Edens, L., I. Bom, A.M. Lerdeboer, J. Maat, M.Y. Toonen, C Visser and CT. Verrips. 1984. Synthesis and processing of the plant protein thaumatin in yeast. Cell 37, 629-633. Edman, J.C, and K.J. Kwon-Chung. 1990. Isolation of the URA5 gene from Cryptococcus neoformans var. neoformans and its use as a selective marker for transformation. Mol. Cell. Biol. 10, 4538-4544. Edwards, J.E. 1991. Invasive Candida infections. Evolution of a fungal pathogen. N. Engl. J. Med. 323, 1060-1062. Egan, K.M., and G.A. Bitter. 1984. Expression of heterologous genes in Saccharomyces cereuisiae from vectors utilizing the glyceraldehyde3-phosphate dehydrogenase gene promoter. Abstract 131, ASM Conf on Genetics and Molecular Biology in Industrial Microorganisms, Bloomington, IN. American Society for Microbiology, Washington, DC. Ehrenberg, L., I. Fedorcsak and F. Solymosy. 1976. Diethyl pyrocarbonate in nucleic acid research. Prog. Nucleic Acid Res. 16, 189-262. Eijkman, C 1901. Ueber Enzyme bei Bakterien und Schimmelpilzen. Zentralbl. Bakteriol. Parasitenkd., Abt. I, 29, 841-848. El-Masry, H.G., and J. Zsolt. 1968. Geotrichum nouakii n. sp. Acta Univ. Szeged., Acta Biol., N.S. 12, 67-70. Ellis, D.H., and T.J. Pfeiflfer. 1990. Natural habitat of Cryptococcus neoformans var. gattii. J. Clin. Microbiol. 28, 1642-1644. Emmons, C.W 1955. Saprophytic sources of Cryptococcus neoformans associated with the pigeon {Columbia livia). Am, J. Hyg. 62, 227-232. Emmons, C.W, C H . Binford and J.R Utz. 1970. Medical Mycology, 2nd edn. Lea & Febiger, Philadelphia, PA. Engel, L. 1877. Untitled. Bull. Soc. Sci. de Nancy Ser. II 3 (Fascicule VI), 20. Eriksson, O.E. 1994. Pneumocystis carinii, a parasite in lungs of mammals, referred to a new family and order (Pneumocystidaceae, Pneumocystidales, Ascomycota). Syst. Ascomycetum 13, 165-180. Eriksson, O.E., A. Svedskog and S. Landvik. 1993. Molecular evidence for the evolutionary hiatus between Saccharomyces cereuisiae and Schizosaccharomyces pombe. Syst. Ascomycetum 11, 119-162. Erke, K.H. 1976. Light microscopy of basidia, basidiospores and nuclei in spores and h)^hae of Filobasidiella neoformans (Cryptococcus neoformans). J. Bacteriol. 128, 445-455.

References Etchells, J.L., and T.A. Bell. 1950a. Film yeasts on commercial cucumber brines. Food Technol. 4, 77-83. Etchells, J.L., and T.A. Bell. 1950b. Classification of yeasts fi-om the fermentation of commercially brined cucumbers. Farlowia 4, 87-112. Evans, E.E. 1949. An immunologic comparison of twelve strains of Cryptococcus neoformans (Torula histolytica). Proc. Soc. Exp. Biol. Med. 71, 644-646. Evans, E.E. 1950. The antigenic composition of Cryptococcus neoformans. I. A serologic classification by means of the capsular and agglutination reactions. J. Immunol. 64, 423-430. Evans, R.G. 1965. Sporobolomyces as a cause of respiratory allergy. Acta Allergol. 20, 197-205. Fabian, F.W., and H.H. Hall. 1933. Yeasts found in fermented maple syrup. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 89, 31-47. Fabian, F.W., and R.I. Quinet. 1928. A study of the cause of honey fermentation. Tech. Bull. Agric. Exp. Stn. Michigan St. Coll. 92, 141. Falcao de Morals, J.D., and M.H. Dalia Maia. 1959. Estudos de microorganismos encontrados em leitos de despejos de caldas de destilarias de Pemambuco, II. Una nova especie de Hansenula: H. polymorpha. An. Esc. Super. Quim. Univ. Recife 1, 15-20. Falcone, C , M. Saliola, X.J. Chen, L. Frontali and H. Fukuhara. 1986. Analysis of a 1.6 \\m circular plasmid from the yeast Kluyveromyces drosophilarum: structure and dimorphism. Plasmids 15, 248-252. Fambach. 1926. Trichosporon equinum. Z. Infektionskr. 29, 124-142. Fang, S.-E, T.-C. Yen and J.-C. Yue. 1966. Identification of some species of Geotrichum. Acta Microbiol. Sin. 12, 64-73. Farahnak, F , T. Seki, D.D.Y. Ryu and D. Ogrydziak. 1986. Construction of lactose-assimilating and high-ethanol-producing yeasts by protoplast fiision. Appl. Environ. Microbiol. 51, 362-367. Farkas, V 1990. Fungal cell walls: their structure, biosynthesis and biotechnological aspects. Acta Biotechnol. 10, 225-238. Fayod, V 1885. Notes sur quelques champignons parasites nouveaux ou peu connus. Ann. Sci. Nat. Ser. 7, 2, 28-54. Fell, J.W. 1961. A new species of Saccharomyces isolated from a subtropical estuary. Antonie van Leeuwenhoek 27, 27-30. Fell, J.W. 1966. Sterigmatomyces, a new fungal genus from marine areas. Antonie van Leeuwenhoek 32, 99-104. Fell, J.W. 1970a. Sterigmatomyces Fell. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 12291234. Fell, J.W. 1970b. Yeasts with heterobasidiomycetous life cycles. In: D.G. Ahearn (Ed.), Recent Trends in Yeast Research, Spectrum, Vol. I. Georgia State University, Atlanta, GA, pp. 49-66. Fell, J.W. 1974. Heterobasidiomycetous yeasts Leucosporidium and Rhodosporidium. Their systematics and sexual incompatibility systems. Trans. Mycol. Soc. Japan 15, 316-323. Fell, J.W. 1976. Yeasts in oceanic regions. In: E.B.G. Jones (Ed.), Recent Advances in Aquatic Mycology. Elek Science, London, pp. 93-124. Fell, J.W. 1984a. Teliospore-forming yeasts. In: N.J.W Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 4 9 1 ^ 9 5 . Fell, J.W. 1984b. Sympodiomyces Fell et Statzell. In: N.J.W Kregervan Rij (Ed.), The Yeasts, A Taxonomic Study. Elsevier, Amsterdam, pp. 930-932. Fell, J.W 1993. Rapid identification of yeast species using three primers in a polymerase chain reaction. Mol. Mar. Biol. Biotechnol. 2, 174180. Fell, J.W. 1995. rDNA targeted oligonucleotide primers for the identification of pathogenic yeasts in a polymerase chain reaction. J. Industr. Microbiol. 14, 4 7 5 ^ 7 7 . Fell, J.W, and I.L. Hunter. 1968. Isolation of heterothallic yeast strains of Metschnikowia Kamienski and their mating reactions with Chlamydozyma Wickerham spp. Antonie van Leeuwenhoek 34, 3 6 5 376. Fell, J.W, and I.L. Hunter. 1974. Torulopsis austromarina sp. nov. A yeast isolated fi-om the Antarctic Ocean. Antonie van Leeuwenhoek 40,307-310.

967

Fell, J.W, and N.J.W. Kreger-van Rij. 1984. Classification of the basidiosporogenous yeasts. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 32-35. Fell, J.W, and C.P. Kurtzman. 1990. Nucleotide sequence analysis of a variable region of the large subunit rRNA for identification of marineoccurring yeasts. Curr. Microbiol. 21, 295-300. Fell, J.W, and S.A. Meyer. 1967. Systematics of yeast species in the Candida parapsilosis group. Mycopathol. Mycol. Appl. 32, 177-193. Fell, J.W, and H.J. PhafiF. 1967. Three new yeasts: Cryptococcus dimennae, Cryptococcus kuetzingii and Cryptococcus lactativorus spp. n. Antonie van Leeuwenhoek 33, 464-472. Fell, J.W, and H.J. Phaff. 1970. Leucosporidium Fell, Statzell, Hunter et Phaflf. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study. Elsevier, Amsterdam, pp. 776-802. Fell, J.W, and J.I. Pitt. 1969. Taxonomy of the yeast genus Metschnikowia: a correction and a new variety. J. Bacteriol. 98, 8 5 3 854. Fell, J.W, and A.C. Statzell. 1971. Sympodiomyces gen. n., a yeast-like organism from southern marine waters. Antonie van Leeuwenhoek 37, 359-367. Fell, J.W, and A. Statzell-Tallman. 1980a. Rhodosporidium paludigenum sp. nov. A basidiomycetous yeast from intertidal waters of South Florida. Int. J. Syst. Bacteriol. 30, 658-659. Fell, J.W, and A. Statzell-Tallman. 1980b. Mating between strains of the yeasts Aessosporon salmonicolor and Sporobolomyces spp. Int. J. Syst. Bacteriol. 30, 206-207. Fell, J.W, and A. Statzell-Tallman. 1981. Heterothallism in the basidiomycetous yeast genus Sporidiobolus Nyland. Curr. Microbiol. 5, 77-82. Fell, J.W, and A. Statzell-Tallman. 1982. Multiple allelic incompatibility factors among bifactorial strains of the yeast Leucosporidium (Candida) scottii. Curr. Microbiol. 7, 213-216. Fell, J.W, and A. Statzell-Tallman. 1984. Rhodosporidium Banno. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 509-531. Fell, J.W, and A. Statzell-Tallman. 1992. Systematic placement of the basidiomycetous yeast Cystofilobasidium lari-marini comb. nov. as predicted by rRNA nucleotide sequence analysis. Antonie van Leeuwenhoek 62, 209-213. Fell, J.W, A. Statzell, I.L. Hunter and H.J. Phaflf. 1969. Leucosporidium gen. nov. The heterobasidiomycetous stage of several yeasts of the genus Candida. Antonie van Leeuwenhoek 35, 4 3 3 ^ 6 2 . Fell, J.W, H.J. Phaflf and S.Y Newell. 1970. Rhodosporidium Banno. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. NorthHolland, Amsterdam, pp. 803-814. Fell, J.W, I.L. Hunter and A.S. Tallman. 1973. Marine basidiomycetous yeasts {Rhodosporidium spp. n.) with tetrapolar and multiple allelic bipolar mating systems. Can. J. Microbiol. 19, 643-657. Fell, J.W, A. Statzell-Tallman and C.P Kurtzman. 1984a. Sterigmatomyces Fell. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 921-929. Fell, J.W, A. Statzell-Tallman and D.G. Ahearn. 1984b. Rhodotorula Harrison. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 893-905. Fell, J.W, C.R Kurtzman, A.S. Tallman and J.D. Buck. 1988. Rhodosporidium fluuiale sp. nov., a homokaryotic red yeast from a subtropical brackish environment. Mycologia 80, 560-564. Fell, J.W, C.P Kurtzman and K.J. Kwon-Chung. 1989. Proposal to conserve Cryptococcus (Fungi). Taxon 38, 151-152. Fell, J.W, A. Statzell-Tallman, M.J. Lutz and C.P Kurtzman. 1992. Partial rRNA sequences in marine yeasts: a model for identification of marine eukaryotes. Mol. Mar. Biol. Biotechnol. 1, 175-186. Fell, J.W, T. Boekhout and D.W Freshwater. 1995. The role of nucleotide sequence analysis in the systematics of the yeast genera Cryptococcus and Rhodotorula. Stud. Mycol. 38, 129-146. Felsenstein, J. 1988. Phylogenies fi-om molecular sequences: inference and reliability. Annu. Rev. Genet. 22, 521-565.

968

References

Fernandez, M.J., and M. Ruiz-Amil. 1965. Tartaric acid metabolism in Rhodotorula glutinis. Biochem. Biophys. Acta 107, 383-385. Femandez-Baquero, G., and F. Trespalacios. 1959. Piedra. Primer caso observado en Cuba. Bol. Soc. Cubana Dermatol. Sifilogr. 16, 21-27. Ferraris, T. 1899. Contribuzione alio studio dei miceti degli agrumi. Di un nuovo ifomiceti parasitica nei fruti d'Arancio. Malpighia 13, 368-381. Ferreira, J.D., and H.J. PhafF. 1959. Life cycle and nuclear behavior of a species of the yeast genus Schwanniomyces. J. Bacteriol. 78, 352-361. Fiasson, J.-L. 1967. Recherche chimiotaxonomique sur les champignons. Les carotenoides de Sporidiobolus johnsonii Nyland. C.R. Acad. Sci. Paris, Ser. D 264, 2744-2745. Fiasson, J.-L. 1972. Recherche des carotenoMes chez diverses levures anascosporees. C.R. Acad. Sci. Ser. D 247, 3465-3467. Fiasson, J.-L., M. Trouilloud and A. Grange. 1973. Variation de contenu pigmentaire de Sporidiobolus johnsonii (Sporobolomycetaceae) sous I'influence de divers facteurs de milieu. Rev. Mycol. 37, 48-59. Field, K.G., G.J. Olsen, D.J. Lane, S.J. Giovannoni, M.T. Chiselin, B.C. Raff, N.R. Pace and R.A. Raff. 1988. Molecular phylogeny of the animal kingdom. Science 239, 748-753. Filippov, G.S. 1932. Porca fruktovyh konservov, vyzvannaja drozzevym gribkom. Tr. Cent. Nauchno-Issled. biohim. inst. pise. vkus. prom. Narkomsnaba Sojuza SSR 2, 26-32. Fiol, J.B. 1967. Les besoins vitaminiques dans les genres Debaryomyces Kloecker, Schwanniomyces Kloecker, Hansenula H. et P. Sydow et Endomycopsis Dekker. C.R. Acad. Sci. Paris, Ser. D, 264, 1605-1607. Fiol, J.B. 1973. Biosystematique des levures: recherches d'osidases, besoins vitaminique, teneur en guanine-cytosine des ADN, These. Universite Claude Bernard, Lyon. Fiol, J.B., and G. Billon-Grand. 1977. Nitrate reductase des Saccharomyces (groupe Torulaspord) et des Debaryomyces. Implications systematiques. Mycopathologia 60, 109-113. Fiol, J.B., and G. Billon-Grand. 1978a. Osidases, nitrite et nitrate reductases dans les genres Hanseniaspora et Kloeckera. Mycopathologia 63, 47-51. Fiol, J.B., and G. Billon-Grand. 1978b. Etude de quelques enzymes intracellulaires dans les genres Dekkera et Brettanomyces; consequences systematiques. Mycopathologia 64, 183-186. Fiol, J.B., and G. Billon-Grand. 1981. Bio-systematique des Pichia. Mycopathologia 74, 3-8. Fiol, J.B., and M. Claisse. 1982. Les cytochromes des Kluyveromyces: determination et implications systematiques. Mycopathologia 78, 177-184. Fiol, J.B., and S. Poncet. 1980. Systematique du genre Kluyveromyces: hybridation ADN-ADN. Mycopathologia 70, 13-23. Fischer, B., and C. Brebeck. 1894. Zur Morphologic, Biologic, und Systematik der Kahmpilze, der Monilia Candida Hansen und des Soorerregers. C. Fischer, Jena. Fischer, G.W., and C.S. Holton. 1957. Biology and Control of the Smut Fungi. Ronald Press, New York. Fitzgerald-Hayes, M. 1987. Yeast centromeres. Yeast 3, 187-200. Flarer, F. 1931. Ricerche cliniche e sperimentale sui fattori etiopatogenetici di alcune epidermomicosi. Arch. Ital. Dermatol. Sifilogr. Venereol. 7, 4 1 5 ^ 7 8 . Fleet, G.H. 1984. The occurrence and fiinction of endogenous walldegrading enzymes in yeast. In: C. Nombela (Ed.), Microbial Cell Wall Synthesis and Autolysis. Elsevier, Amsterdam, pp. 227-238. Fleet, G.H. 1985. Composition and structure of yeast cell walls. In: M.R. McGinnis (Ed.), Current Topics in Medical Mycology, Vol. 1. Springer, New York, pp. 24-56. Fleet, G.H. 1990. Food spoilage yeasts. In: J.F.T. Spencer and D.M. Spencer (Eds.), Yeast Technology. Springer, Berlin, pp. 124166. Fleet, G.H. 1991. Cell walls. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. 4, 2nd edn.. Yeast Organelles. Academic Press, London, pp. 199-277. Fleet, G.H., and H.J. PhaflF. 1981. Fungal glucans - structure and metabolism. In: W. Tanner and FA. Loewus (Eds.), Encyclopedia of

Plant Physiology, New Series, Vol. 13B. Springer, New York, pp. 4 1 6 440. Flegel, T. 1976. Conjugation and growth of Sirobasidium magnum in laboratory culture. Can. J. Bot. 54, 411-418. Flegel, T.W. 1981. The pheromonal control of mating in yeasts and its phylogenetic implication: a review. Can. J. Microbiol. 27, 373-389. Fleming, W.H., J.M. Hopkins and G.A. Land. 1977. New culture medium for the presumptive identification of Candida albicans and Cryptococcus neoformans. J. Clin. Microbiol. 5, 236-243. Florenzano, G. 1950. Due nuove specie dei lieviti asporogeni, isolati da vini (Trichosporon intermedium nov. spec, e Brettanomyces custersii nov spec). Ric. Sci. 20, 1494-1498. Florenzano, G. 1951. Diffusione e significato enologico dei lieviti Brettanomyces. Atti Accad. Ital. Vite Vino 3, 236-249. Florenzano, G. 1953. In: T. di Enologia, Sansoni Firenze, Vol. 2, p. 299. Fogleman, J.C, W.T. Starmer and W.B. Heed. 1981. Larval selectivity for yeast species by Drosophila mojauensis in natural substrates. Proc. Natl. Acad. Sci. USA 71, 4 4 3 5 ^ 4 3 9 . Fogleman, J.C, W.T. Starmer and W.B. Heed. 1982. Comparisons of yeast florae from natural substrates and larval guts of southwestern Drosophila. Oecologia 52, 187-191. Fonseca, A., and IP. Sampaio. 1992. Rhodosporidium lusitaniae sp. nov., a novel homothallic basidiomycetous yeast species from Portugal that degrades phenolic compounds. Syst. Appl. Microbiol. 15, 47-51. Fonseca, A., and N. van Uden. 1991. Cryptococcus yarrowii sp. nov., a novel yeast species from Portugal. Antonie van Leeuwenhoek 59, 177-181. Fontoynont, M., and H. Boucher. 1923. Contribution a I'etude des mycoses de Madagascar. Ann. Dermatol. Syph. Serie VI, 4, 318-344. Forrest, S.I., C.F. Robinow and M.A. Lachance. 1987. Nuclear behaviour accompanying ascus formation in Debaryomyces polymorphus. Can. J. Microbiol. 33, 967-970. Foster, E.W., D.C. Gyure, D.L. Heefner, C.A. Weaver, M.J. Yarus and L.A. Burdzinski. 1992. Riboflavin producing strains of microorganisms. U.S. Patent 5 120655. Foulerton, A.G.R. 1900. On the pathogenic action of Blastomycetes. J. Pathol. Bacteriol. 6. 37-63. Fowell, R.R. 1952. Sodium acetate agar as a sporulation medium for yeasts. Nature 170, 578. Fox, R.D., and G.J. Wong. 1990. Homothallism and heterothallism in Tremella fuciformis. Can. J. Bot. 68, 107-111. Fragner, P. 1969. Trichosporon jirovecii sp. nov. Ceska Mykol. 23, 160162. Fragner, P. 1970. Spannweite der Art Trichosporon cutaneum. Ceska Mykol. 24, 153-161. Fragoso, R.G., and R. Ciferri. 1928. Hongos parasitos y saprifitos de la Repiiblica Dominicana. Bofl. R. Soc. Esp. Hist. Nat. 28, 377-388. Francke-Grosmann, H. 1952. Uber die Ambrosiazucht der beiden KiefernborkenkaferM;;e/o/?/z//M5' minor Htg. undlps acuminatus. Gyll. Medd. Statens Skogsforskningsinst. (Swed.) 41, 1-52. Frazer, H.L. 1944. Observations on the method of transmission of internal boll disease of cotton by the cotton stainer-bug. Ann. Appl. Biol. 21, 271-290. Frederiksen, PS. 1956. A new Rhodotorula species, Rhodotorula macerans sp. n. isolated from fieldretted flax straw. Friesia 5, 234-239. Freeman, W, and F.D. Weidman. 1923. Cystic blastomycosis of the cerebral gray matter caused by Torula histolytica Stoddard and Cutler. Arch. Neurol. Psychiatry 9, 569-603. Frei, W 1921. Eine Soormycose der Nagel bei einer SalvarsanDermatitis. Arch. Dermatol. Syph. 129, 4 0 4 ^ 3 3 . Freifelder, D. 1960. Bud position in Saccharomyces cereuisiae. J. Bacteriol. 80, 567-568. Fresenius, J.B.G.W. 1850. Beitrage zur Mykologie, Vol. 1, Frankfiirt am Main. Fries, E. 1822. Systema Mycologicum 2, 213. Fries, E.M. 1832. Systema mycologicum 3(2). Gryphiswaldae, Lund. Froilano de Mello, I., and L. Gonzaga Fernandes. 1918. Ensaio de

References classificagao de fungos pertencentes a classe dos "Blastomyces". Arq. Hig. Patol. Exot. 6,207-316. Froilano de Mello, I., and A. Paes. 1918. Endomyces cruzi, n. sp. agente (?) duma endomicose bronquica simulando asma. Arq. Hig. Patol. Exot. 6, 51-60. Fukazawa, Y., T. Nakase, T. Shinoda, A. Nishikawa, K. Kagaya and T. Tsuchiya. 1975. Significance of cell wall structures on yeast classification: proton magnetic resonance and serological and deoxyribonucleic acid characterization of Candida sake and related species. Int. J. Syst. Bacteriol. 25, 304-314. Fukuhara, H. 1995. Linear DNA plasmids of yeasts. FEMS Microbiol. Lett. 131, 1-9. Furman, R.M., and D.G. Aheam. 1983. Candida ciferrii and Candida chiropterorum isolated fi^om clinical specimens. J. Clin. Microbiol. 18, 1252-1255. Furukawa, T , T. Matsuyoshi, Y. Minoda and K. Yamada. 1977. Fermentative production of citric acid from «-paraflfins by yeast. J. Ferment. Technol. 55, 356-363. Fuson, G.B., C.W. Price and H.J. Phaff. 1979. Deoxyribonucleic acid sequence relatedness among some members of the yeast genus Hansenula. Int. J. Syst. Bacteriol. 29, 64-69. Fuson, G.B., C.W. Price and H.J. Phaff. 1980. Deoxyribonucleic acid base sequence relatedness among strains of Pichia ohmeri that produce dimorphic ascospores. Int. J. Syst. Bacteriol. 30, 217-219. Fuson, G.B., H.L. Presley and H.J. PhafiF. 1987. Deoxyribonucleic acid base sequence relatedness among members of the yeast genus Kluyueromyces. Int. J. Syst. Bacteriol. 37, 371-379. Gal, A.A., M.N. Koss, J. Hawkins, S. Evans and H. Einstein. 1986. The pathology of pulmonary cryptococcal infections in the acquired immunodeficiency syndrome. Arch. Pathol. Lab. Med. 110, 502-507. Galgoczy, J., and E.K. Novak. 1962. A new yeast Paratorulopsis banhegyii n. sp. from human skin. Acta Microbiol. Acad. Sci. Hung. 9, 77-79. Galgoczy, J., and E.K. Novak. 1965. Rhodotorula zsoltii n. sp., a new species of yeasts, and some notes on the taxonomy of the genus Rhodotorula. Acta Microbiol. Acad. Sci. Hung. 12, 151-155. Gams, W. 1983. Two species of mycoparasitic ftmgi. Sydowia 36, 46-52. Gams, W. 1992. The analysis of communities of saprophytic microfiingi with special reference to soil fiingi. In: W. WinterhoflF (Ed.), Fungi in Vegetation Science. Kluwer Academic Publishers, Dordrecht, The Netherlands, pp. 183-223. Gams, W., and J. Grinbergs. 1970. Ascoidea corymbosa n. spec, ein hefeahnlicher Pilz im Bast von Araucaria araucana. Acta Bot. Neerl. 19, 794-798. Gams, W., and M.R. McGinnis. 1983. Phialemonium, a new anamorph genus intermediate between Phialophora and Acremonium. Mycologia 75, 977-987. Gams, W., and J.A. von Arx. 1980. Validation of Symbiotaphrina (imperfect yeasts). Persoonia 10, 542-543. Gandy, D.G. 1966. Itersonilia perplexans on chrysanthemum: alternative hosts and ways of overwintering. Trans. Br. Mycol. Soc. 49, 499-507. Ganesan, A.T., and M.S. Swaminathan. 1958. Staining the nucleus in yeasts. Stain Technol. 33, 115-121. Ganter, P.F., and W.T. Starmer. 1992. Killer factor as a mechanism of interference competition in yeasts associated with cacti. Ecology 73, 54-67. Ganter, RE, W.T Starmer, M.A. Lachance and H.J. Phaflf. 1986. Yeast communities from host plants and associated Drosophila species in southern Arizona: new isolations and analysis of the relative importance of hosts and vectors on community composition. Oecologia 70, 386-392. Garber, R.C., B.G. Turgeon, E.U. Selker and O.C. Yoder. 1988. Organization of ribosomal RNA genes in the fiingus Cochliobolus heterostrophus. Curr. Genet. 14, 573-582. Gargeya, I.B., WR. Pruitt, R.B. Simmons, S.A. Meyer and D.G. Ahearn. 1990. Occurrence of Clavispora lusitaniae, the teleomorph of Candida lusitaniae, among clinical isolates. J. Clin. Microbiol. 28, 2224-2227. Gargeya, LB., WR. Pruitt, S.A. Meyer and D.G. Aheam. 1991. Candida

969

haemulonii fi-om clinical specimens in the USA. J. Med. Vet. Mycology 29, 335-338. Gaumann, E.A. 1952. The Fungi. Hafner, New York. [Translated by EL. Wynd.] Gedoelst, L. 1902. Les Champignons Parasites de I'Homme et des Animaux Domestiques. Lamertin, Brussels. Gedoelst, L. 1911. Synopsis de Parasitologic de I'Homme et des Animaux Domestiques. van In, Lierre. Geiger, A. 1910. Beitrage zur Kenntnis der Sprosspilze ohne Sporenbildung. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 27, 97-149. Genestar Serra, R. 1956. Nueva especie de levadura aislada de concentrado de tanino Candida majoricensis nov. sp. Microbiol. Esp. 9, 275-279. Gentles, J.C, and P.M. Bond. 1977. Protothecosis of Atlantic salmon. Sabouraudia 15, 133-139. Gilliland, R.B. 1962. The Brettanomyces II. Taxonomic significance of slow fermentations and description of a new species. J. Inst. Brew. 68, 51-59. Gimenez-Jurado, G. 1992. Metschnikowia gruessii, sp. nov., the teleomorph of Nectaromyces reukaufii but not of Candida reukaufii. Syst. Appl. Microbiol. 15, 4 3 2 ^ 3 8 . Gimenez-Jurado, G., and N. van Uden. 1989. Leucosporidium fellii sp. nov., a basidiomycetous yeast that degrades L(+)-tartaric acid. Antonie van Leeuwenhoek 55, 133-141. Gimenez-Jurado, G., T. Placido, A.J. Cidadao, C. Cabega-Silva, E. Fonseca, H.J. Roeijmans, G.W. van Eijk and N. van Uden. 1990. Kurtzmanomyces tardus sp. nov, a new anamorphic yeast species of basidiomycetous affinity. Antonie van Leeuwenhoek 58, 129-135. Gimenez-Jurado, G., A.J. Cidadao and A. Beijn-van der Waaij. 1994. A novel heterothallic ascomycetous yeast species: Stephanoascus smithiae, teleomorph of Candida edax. Syst. Appl. Microbiol. 17, 237-246. Gimeno, C.J., and G.R. Fink. 1992. The logic of cell division in the life cycle of yeasts. Science 257, 626. Ginns, J. 1986. The genus Syzygospora (Heterobasidiomycetes, Syzygosporaceae). Mycologia 78, 619-636. Ginns, J., and S. Sunhede. 1978. Three species of Christiansenia (Corticiaceae) and the teratological galls on Collybia dryophila. Bot. Not. 131, 167-173. Giordano, A. 1935. Role du Torulopsis neoformans (Sanfelice) Red. en pathologic humaine. Boll. Sez. Ital. Soc. Intern. Microbiol. 7, 119123. Giovannozzi, M. 1939. Studi sulla fermentazione del tabacco. IV nota. Sui blastomiceti del tabacco Kentucky in fermentazione - i lieviti sporigeni. Boll. Tec. Regio 1st. Sper. Colt. Tab. 'Leonardo Angeloni', Scafati, no. 1. Giovannozzi, M. 1941. Studi sulla fermentazione dei tabacchi. VI nota. I blastomiceti del tabacco in fermentazione - i lieviti asporigeni. Boll. Tec. Regio 1st. Sper. Colt. Tab. 'Leonardo Angeloni' Scafati, no. 3 ^ . Giovannozzi, M. 1948. Microflora blastomicetica dei tabacchi. Mycopathologia 4, 260-267. Girbardt, M. 1979. A microfilamentous septal belt (FSB) during induction of cytokinesis in Trametes versicolor (L. ex Fr.). Exp. Mycol. 3, 215-228. Glanser, M., and S.N. Ban. 1983. Degradation of lignin of corn stover by means of yeasts: Trichosporon. Process Biochem. 19, 105-110. Goates, B.J., and J.A. Hoffman. 1987. Nuclear behavior during teliospore germination and sporidial development in Tilletia caries, T. foetida, and T. controversa. Can. J. Bot. 65, 512-517. Goidanich, G.R., R. Ciferri and P. Redaelli. 1939. Identificazione di alcuni lieviti isolati da pasta di legno. Mycopathologia 2, 48-51. Gokhale, A.A. 1972. Studies on the genus Tilletiopsis. Nova Hedwigia 23, 795-809. Golubev, W.I. 1973. Nadsonia commutata nov. sp. Mikrobiologiya 42, 1058-1061. Golubev, W.I. 1977. Metschnikowia lunata sp. nov. Antonie van Leeuwenhoek 43, 317-322.

970

References

Golubev, W.I. 1981. Novye kombinatsii drozhzhevykh gribov roda Cryptococcus. Mikol. Fitopatol. 15, 4 6 7 ^ 6 8 . Golubev, W.I. 1984. Cryptococcus fuscescens sp. nov., and a diagnostic key to the nitrate-positive species of the genus Cryptococcus. J. Gen. Appl. Microbiol. 30, 4 2 7 ^ 3 3 . Golubev, W.I. 1989a. The action spectrum of killer toxin produced by Rhodotorula glutinis and its taxonomic significance. Mikrobiologiya 58, 99-103. In Russian. Golubev, W.I. 1989b. Catabolism of m-inositol and taxonomic value of D-glucuronate assimilation in yeasts. Mikrobiologiya 58, 276-283. In Russian. Golubev, W.I. 1990a. Killer-sensitive relationships among yeast-like fungi: physiogenic implications. Proc. 14th Int. Spec. Symp. Yeasts, Smolenice, pp. 36-38. Golubev, W.I. 1990b. Spectrum action of Cystofilobasidium bisporidii mycocin fi-om taxonomic viewpoint. Mikol. Fitopatol. 24, 542-547. In Russian. Golubev, W.I. 1991a. Capsules. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. 4, 2nd edn. Yeast Organelles. Academic Press, London, pp. 175-198. Golubev, W.I. 1991b. Taxonomic evaluation of mycocins produced by basidiomycetous yeast Cryptococcus podzolicus. Mikrobiologiya 60, 115-121. In Russian. Golubev, W.I. 1992a. Antibiotic activity and taxonomic position of Rhodotorula fujisanensis (Soneda) Johnson et Phaflf. Mikrobiol. J. 54, 21-26. Golubev, W.I. 1992b. Taxonomic evaluation of the fungistatic mycocins produced by the yeasts of Rhodotorula minuta complex. Mikol. Fitopatol. 25, 481-486. In Russian. Golubev, W.I. 1993. Rhodosporidium babjeuae, a new heterothallic yeast species (Ustilaginales). Syst. Appl. Microbiol. 16, 445-449. Golubev, W.I. 1995. Perfect state of Rhodomyces dendrorhous (Phaffia rhodozyma). Yeast 11, 101-110. Golubev, W.I., and LP. Bab'eva. 1972. Debaryomyces formicarius sp. n. and Debaryomyces cantarellii associated with the ants of the group Formica rufa L. J. Gen. Appl. Microbiol. 18, 249-254. Golubev, W.I., and LP. Bab'eva. 1977. Torulopsis apis var. galacta var. nov Int. L Syst. Bacteriol. 27, 165-167. Golubev, WL, and VM. Blagodatskaya. 1978. The significance of the ability to assimilate D-glucuronic acid, D-glucono-6-lactone and 5keto-D-gluconate in identification of species of Candida Berkhout. Mikrobiologiya 47, 841-848. In Russian. Golubev, W.I., and VM. Blagodatskaya. 1993. Taxonomic heterogeneity of Pichia membranaefaciens Hansen revealed by killer-sensitive reactions. Mikrobiologiya 62, 291-299. In Russian. Golubev, WL, and T. Boekhout. 1992. Dimorphism in Itersonilia perplexans: differences between yeast and hyphal forms in sensitivity to mycocins produced by tremellaceous yeasts. FEMS Microbiol. Lett. 98, 187-190. Golubev, WL, and L.G. Churkina. 1990. High incidence of killer strains in the yeast Rhodotorula mucilaginosa (Jorgensen) Harrison. Izv. Akad. Nauk SSSR, Ser. Biol. N 6, 854-861. In Russian. Golubev, WL, and L.B. Kuznetsova. 1989. Formation and spectrum of action of mycocins of the basidiomycetous yeast Cryptococcus laurentii (Kufferath) Skinner. Mikrobiologiya 58, 980-984. In Russian. Golubev, WL, and L.B. Kuznetsova. 1991. Action spectrum taxonomic specificity of Filobasidium capsuligenum mycocin. Mikrobiologiya 60, 530-536. In Russian. Golubev, WL, and Y Shabalin. 1994. Microcin production by the yeast Cryptococcus humicola. FEMS Microbiol. Lett. 119, 105-110. Golubev, WL, and E.L. Tauson. 1979. Heterogeneity of a yeast fimgus, Cryptococcus terreus di Menna. Mikol. Fitopatol. 13, 462-467. Golubev, WL, and A.B. Tsiomenko. 1985. Killer strains of ballistosporogenous yeast fungus of the genus Sporidiobolus Nyland. Dokl. Akad. Nauk SSSR 282, 425-428. In Russian. Golubev, WL, and L.M. Vagabova. 1977. Deoxyribonucleic acid base

composition in some yeast species. Izv. Akad. Nauk SSSR Ser. Biol. 6, 933-936. In Russian. Golubev, WL, and N.V Vdovina. 1973. Soil yeasts of rice fields treated by pesticides. In: The Behavior, Conversion and Analysis of Pesticides and their Metabolites in Soil. USSR Academy of Sciences, Pushchino, pp. 66-73. In Russian. Golubev, WL, LP. Bab'eva, VM. Blagodatskaya and I.S. Reshetova. 1977a. Taxonomy of yeasts isolated from the sap of birch (Betula verricosus Ehrh.). Mikrobiologiya 46, 564-569. Golubev, WL, LP. Bab'eva and S.N. Novik. 1977b. Yeast succession in sap flows of birch. Ekologiya 5, 21-26. In Russian. Golubev, WL, VM. Blagodatskaya, S.O. Suetin and R.S. Trotsenko. 1981. Pichia inositovora and Candida paludigena, two new species of yeasts isolated fi-om peat. Int. L Syst. Bacteriol. 31, 91-96. Golubev, WL, LP Bab'eva, M.E. Vimovarova and VS. Tyurin. 1987. Additional strains of rare Nadsonia species. Mikrobiologiya 56, 4 5 4 459. Golubev, WL, A.B. Tsiomenko and L.P. Tikhomirova. 1988. Plasmid-free killer strains of the yeast Sporidiobolus pararoseus. Mikrobiologiya 57, 805-809. In Russian. Golubev, WL, M.Th. Smith, G.A. Poot and J.L.E Kock. 1989. Species delineation in the genus Nadsonia Sydow. Antonie van Leeuwenhoek 55, 369-382. Gomes, J.M. 1924. Mycose broncho-pulmonar Monilia butantanensis (n. sp.). Ann. Paulistas Med. Cirurg. 15, 246-251. Gomes de Moraes, R. 1941. Novo agente de Tricomicose nodular: ''Trichosporon ribeiroi" n. sp. Cultura Medica, Rio de Janeiro 3, 6 4 89. Gomez-Ruiz, L., M. Garcia-Garibay and E. Barzana. 1988. Utilization of endo-polygalacturonase from Kluyueromyces fragilis in the clarification of apple juice. I Food Sci. 53, 1236. Gooday, G.W, and N.A.R. Gow. 1983. A model of the hyphal septum of Candida albicans. Exp. Mycol. 7, 370-373. Gordon, M.A. 1951. The lipophilic mycoflora of the skin. I. In vitro culture of Pityrosporum orbiculare n. sp. Mycologia 43, 524-535. Gorin, P.A.L 1973. The position of phosphate groups in the phosphomannans of Hansenula capsulata, as determined by carbon13 magnetic resonance spectroscopy. Can. J. Chem. 51, 2105-2109. Gorin, P.A.L, and LET. Spencer. 1968. Galactomannans of Trichosporon fermentans and other yeasts; proton magnetic resonance and chemical studies. Can. L Chem. 46, 2299-2304. Gorin, P.A.J., and LET. Spencer. 1970. Proton magnetic resonance spectroscopy - an aid in identification and chemotaxonomy of yeasts. Adv Appl. Microbiol. 13, 25-89. Gorin, P.A.L, LET. Spencer and S.S. Bhattacharjee. 1969a. Structures of yeast mannans containing both a- and (3-linked D-mannopyranose units. Can. L Chem. 47, 1499-1505. Gorin, P.A.L, LET. Spencer and D.E. Eveleigh. 1969b. Enzymatic degradation of yeast cell-wall mannans and galactomannans to polymeric fi-agments containing a-(l —>6)-linked D-mannopyranose residues. Carbohydr. Res. 11, 387-398. Gorin, S.E., A.E Sviridov and LP. Bab'eva. 1978. Extracellular polysaccharides and the taxonomy of the species of Lipomyces. Microbiologiya 47, 756-761. In Russian. Goto, K., Y Iwatuki, K. Kitano, T. Obata and S. Hara. 1990. Cloning and nucleotide sequence of the KHR killer gene of Saccharomyces cereuisiae. Agric. Biol. Chem. 54, 979-984. Goto, S. 1963. On a new yeast genus Naganishia. L Ferment. Technol. 41, 459-462. Goto, S. 1979a. A new yeast species, Candida acutus, isolated from sulfited grape must. L Gen. Appl. Microbiol. 25, 145-148. Goto, S. 1979b. Two new yeast species belonging to the genus Candida. L Gen. Appl. Microbiol. 25, 293-297. Goto, S. 1980. Saccharomyces placentae Goto sp. nov. L Gen. Appl. Microbiol. 26,311-313. Goto, S., and H. Oguri. 1983. Two new species of the genus Candida fi"om wild grapes. L Gen. Appl. Microbiol. 29, 85-90. Goto, S., and J. Sugiyama. 1968. Studies on the Himalayan yeasts and

References molds (I). A new species of Debaryomyces and some asporogenous yeasts. J. Japan. Bot. 43, 102-108. Goto, S., and J. Sugiyama. 1970. Studies on Himalayan yeasts and molds (IV). Several asporogenous yeasts, including two new taxa of Cryptococcus. Can. J. Bot. 48, 2097-2101. Goto, S., and H. Takami, 1986. Classification of ascoideaceous yeasts based on the electrophoretic comparison of enzymes and coenzyme Q systems. J. Gen. Appl. Microbiol. 32, 271-282. Goto, S., and I. Yokotsuka. 1962a. Classification of the film yeasts maintained in Japan. Part 1. Genus Pichia. Bull. R. Inst. Ferment., Yamanashi Univ. 9, 1\-11. Goto, S., and I. Yokotsuka. 1962b. Classification of the film yeasts maintained in Japan. Part 2. Genus Hansenula. Bull. R. Inst. Ferment., Yamanashi Univ. 9, 79-87. Goto, S., J. Sugiyama and H. lizuka. 1969. A taxonomic study of Antarctic yeasts. Mycologia 61, 748-774. Goto, S., K. Yamasato and H. lizuka. 1974. Identification of yeasts isolated from the Pacific Ocean. J. Gen. Appl. Microbiol. 20, 309316. Goto, S., Y. Yamakawa and I. Yokotsuka. 1975a. Classification of fi-agrant odor producing Cladosporium (Studies on fragrant odor producing microorganisms. Part I). J. Agric. Chem. Soc. Japan 49, 377-381. Goto, S., Y Yamakawa and I. Yokotsuka. 1975b. Classification of fi-agrant odor producing Geotrichum (Studies on fi-agrant odor producing microorganisms, Part II). J. Agric. Chem. Soc. Japan 49, 519-525. Goto, S., J. Sugiyama, M. Hamamoto and K. Komagata. 1987a. Saitoella, a new anamorphic genus in the Cryptococcaceae to accommodate two Himalayan yeast isolates formerly identified as Rhodotorula glutinis. J. Gen. Appl. Microbiol. 33, 75-85. Goto, S., H. Iwasaki, Y. Okuma, Y Ito and A. Endo. 1987b. New species belonging to the genera Pichia and Candida. J. Gen. Appl. Microbiol. 33, 275-286. Goto, S., S. Horiguchi, H. Kaneko and T. Itoh. 1988. Distribution of pyrophosphatidic acid in yeast species. J. Gen. Appl. Microbiol. 34, 165-182. Gottschalk, M. 1985. Untersuchungen zur Phylogenie der Basidiomyceten anhand des Vergleichs der Nucleotidsequenzen ihrer 5S ribosomalen Ribonukleinsauren, Thesis. Universitat Tubingen. Gottschalk, M., and PA. Blanz. 1984. Highly conserved 5S ribosomal RNA sequences in four rust fimgi and atypical 5S rRNA secondary structure in Microstroma juglandis. Nucleic Acids Res. 12, 3 9 5 1 3958. Gottschalk, M., and PA. Blanz. 1985. Untersuchungen an 5S ribosomalen Ribonukleinsauren als Beitrag zur Klarung von Systematik und Phylogenie der Basidiomyceten. Z. Mykol. 51, 2 0 5 244. Gouy, M., and W.-H. Li. 1989. Phylogenetic analysis based on rRNA sequences supports the archaebacterial rather than the eocyte tree. Nature 339, 145-147. Gow, N.A.R., G.W. Gooday, R.J. Newsam and K. Gull. 1980. Ultrastructure of the septum in Candida albicans. Curr. Microbiol. 4, 357-359. Grawitz, P. 1877. Zur Botanik des Soors und der Dermatomycosen. Dtsch. Z. Prakt. Med., No. 20, 19 May, 209-211. Graziano, F. 1930. La presenza di eumiceti nelle feci dei lattanti sani ed ammalati. G. Batteriol. Immunol. 5, 1061-1077. Greuter, W., H.M. Burdet, V Demoulin, R. Grolle, D.L. Hawksworth, D.H. Nicholson, PC. Silva, F.A. Stafleu, E.G. Voss and J. McNeill (Eds.). 1988. International Code of Botanical Nomenclature. Koeltz Scientific Books, Konigstein, Germany. Greuter, W., FR. Barrie, H.M. Burdet, W.G. Chaloner, V Demoulin, D.L. Hawksworth, P.M. Jorgensen, D.H. Nicolson, PC. Silva, P. Trehane and J. McNeill (Eds.). 1994. International Code of Botanical Nomenclature. Koeltz Scientific Books, Konigstein, Germany.

971

Grigoraki, L., and G. Peju. 1921. Sur une nouvelle espece de levure du genre Debaryomyces (D. matruchoti). C.R. Soc. Biol. 85, 4 5 9 ^ 6 2 . Grinbergs, J. 1967. Zur Kenntnis einer neuen Hefeart: Candida tepae sp. nov. Arch. Mikrobiol. 56, 202-204. Grinbergs, J., and D. Yarrow. 1970a. Two new Candida species: Candida chilensis sp. n. and Candida valdiviana sp. n. Antonie van Leeuwenhoek 36, 143-148. Grinbergs, J., and D. Yarrow. 1970b. Rhodotorula araucariae sp. n. Antonie van Leeuwenhoek 36, 4 5 5 ^ 5 7 . Groenewege, J. 1921a. Ueber das Vorkommen von Emulsin bei Saccharomyceten und das Vorhandensein eines spezifischen Enzyms Zellobiase. Meded. Algem. Proefstn. Landbouw Ned. Indie No. 9, 1-12. Groenewege, J. 1921b. Over de oorzaak van rustiness op rubber van Hevea brasiliensis. Meded. Algem. Proefstn. Landbouw Ned. Indie No. 11,5-19. Gronlund, C. 1892. Eine neue Torula-Art und zwei neue SaccharomycesArten im Neu-Carlsberg Laboratorium untersucht. Z. Gesamte Brauwes. 15, 281. Grosbiisch, J. 1915. Uber eine farblose, stark roten Farbstoff erzeugende Torula. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 42, 625-638. Grose, E.S., and C.J. Marinkelle. 1968. A new species of Candida from Colombian bats. Mycopathol. Mycol. Appl. 36, 225-227. Grove, S.N. 1978. The cytology of hyphal tip growth. In: J.E. Smith and D.R. Berry (Eds.), The Filamentous Fungi, Vol. 3. Edward Arnold, London, pp. 28-50. Griiss, J. 1918. Die Anpassung eines Pilzes (Anthomyces reukaufii) an den Bliitenbau und den Bienenriissel. Ber. Dtsch. Bot. Ges. 35, 746761. Griiss, J. 1926. Genetische und garungsphysiologische Untersuchungen an Nektarhefen. Jahrb. Wiss. Bot. 66, 109-182. Griiss, J. 1927. Uber hochalpine Nektarhefen. II. Mikroanthomyces alpinus nov. gen. et spec. Wochenschr. Brau. 44, 243-246, 253-257. Guadet, J., J. Julien, J.F. Lafey and Y Brygoo. 1989. Phylogeny of some Fusarium species, as determined by large subunit rRNA sequence comparison. Mol. Biol. Evol. 6, 227-242. Gueguen, F. 1904. Les champignons parasites de I'homme et des animaux. These. Paris. Gueho, E. 1979. Deoxyribonucleic acid base composition and taxonomy in the genus Geotrichum Link. Antonie van Leeuwenhoek 45, 199210. Gueho, E., and S.A. Meyer. 1989. A reevaluation of the genus Malassezia by means of genome comparison. Antonie van Leewenhoek 55, 245-253. Gueho, E., and H.J. Phaflf. 1983. Pichia noruegensis, telemorphe de Candida noruegensis: validation per homologie chromosomique. Bull. Soc. Fr. Mycol. Med. 12, 203-208. Gueho, E., J. Tredick and H.J. Phaff. 1984. DNA base composition and DNA relatedness among species of Trichosporon Behrend. Antonie van Leeuwenhoek 50, 17-32. Gueho, E., J. Tredick and H.J. Phaflf. 1985. DNA relatedness among species of Geotrichum and Dipodascus. Can. J. Bot. 63, 961-966. Gueho, E., G.S. de Hoog, M.Th. Smith and S.A. Meyer. 1987a. DNA relatedness, taxonomy, and medical significance of Geotrichum capitatum. J. Clin. Microbiol. 25, 1191-1194. Gueho, E., R.B. Simmons, W.R. Pruitt, S.A. Meyer and D.G. Ahearn. 1987b. Association of Malassezia pachydermatis with systemic infections of humans. J. Clin. Microbiol. 25, 1789-1790. Gueho, E., C.R Kurtzman and S.W. Peterson. 1989. Evolutionary affinities of heterobasidiomycetous yeasts estimated from 18S and 25S ribosomal RNA sequence divergence. Syst. Appl. Microbiol. 12, 230236. Gueho, E., C.P Kurtzman and S.W. Peterson. 1990. Phylogenetic relationships among species of Sterigmatomyces and Fellomyces as determined from partial rRNA sequences. Int. J. Syst. Bacteriol. 40, 60-65. Gueho, E., G.S. de Hoog and M.Th. Smith. 1992a. Neotypification of the genus Trichosporon. Antonie van Leeuwenhoek 61, 285-288.

972

References

Gueho, E., M.Th. Smith, G.S. de Hoog, G. Billon-Grand, R. Christen and W.H. Batenburg-van der Vegte. 1992b. Contributions to a revision of the genus Trichosporon. Antonie van Leeuwenhoek 61, 289-316. Gueho, E., L. Improvisi, R. Christen and G.S. de Hoog. 1993. Phylogenetic relationships of Cryptococcus neoformans and some related basidiomycetous yeasts determined from partial large subunit rRNA sequences. Antonie van Leeuwenhoek 63, 175-189. Gueho, E., L. Improvisi, G.S. de Hoog and B. Dupont. 1994. Trichosporon on humans: a practical account. Mycoses 37, 3-10. Gueho, E., G. Midgley and J. Guillot. 1996. The genus Malassezia with description of four new species. Antonie van Leeuwenhoek 69, 3 3 7 355. Guerra, R 1935. Role des levures en dermatologie. Etude clinique et mycologique. These. Faculte de Medecine de Paris. Guiart, J. 1910. Saccharomycoses. In: Precis de Parasitologic. Bibliotheque Gilbert et Foumier, pp. 106-109. Guidi, G. 1896. Mughetto. Micologia e Metastasi del Mughetto. Stabilimento Tipografico Fiorentino, Firenze, 82pp. Guilliermond, A. 1909. Recherches cytologiques et taxonomiques sur les Endomycetacees. Rev. Gen. Bot. 21, 353-391, 401-419. Guilliermond, A. 1912. Les Levures. Encyclopedic Scientifique. O. Doin et Fils, Paris. Guilliermond, A. 1913. Nouvelles observations sur la sexualite des levures. 1. Existence d'une copulation heterogamique observee dans une espece nouvelle. 2. Sur la copulation de Debaryomyces globosus. 3. Sur les phenomenes de retrogradation de la sexualite constates dans plusieurs levures. Arch. Protistenkd. 28, 52-77. Guilliermond, A. 1914. Monographic des levures d'Afrique occidentale par la mission chevaliere. Ann. Sci. Nat. Bot. Biol. Vegetale. Ser. 9, 19, 1-32. Guilliermond, A. 1918. Zygosaccharomyces Nadsonii: nouvelle espece de levures a conjugaison heterogamique. Bull. Soc. Mycol France 34, 1-16. Guilliermond, A. 1919. Sur une nouvelle levure a copulation heterogamique. C.R. Soc. Biol. 82, 4 6 6 ^ 7 0 . Guilliermond, A. 1928. Recherches sur quelques Ascomycetes inferieurs isoles de la stigmatomycose des graines de cotonnier: essai sur la phylogenie des Ascomycetes. Rev. Gen. Bot. 40, 328-342, 3 9 7 ^ 1 4 , 474-485, 555-574, 606-624, 690-704. Guilliermond, A. 1930. Homo- et heterothallisme chez les levures. C.R. Soc. Biol. 190, 1316-1318. Guilliermond, A. 1935. Sur un champignon nouveau isole de la stigmatomycose des graines de cotonnier, VEremothecium ashbyi et ses relations possibles avec le Spermophthora gossypii. C.R. Hebd. Acad. Sci. 200, 1556-1558. Guilliermond, A. 1936. \1 Eremothecium ashbyi, nouveau champignon parasite des capsules du cotonnier. Rev. Mycol. 1, 115-156. Guilliermond, A., and P. Negroni. 1929. Sur la presence d'une copulation heterogamique dans le Saccharomyces marxianus. C.R. Soc. Biol. 101, 564-566. Guilliermond, A., and G. Peju. 1919. Sur un nouveau champignon presentant des caracteres intermediaires entre les levures et les Endomyces. C.R. Soc. Biol. 82, 1343. Guillot, J., and E. Gueho. 1995. The diversity of Malassezia yeasts confirmed by rRNA sequence and nuclear DNA comparisons. Antonie van Leeuwenhoek 67, 297-314. Guillot, J., E. Gueho and R. Chermette. 1995. Confirmation of the nomenclatural status of Malassezia pahcydermatis. Antonie van Leeuwenhoek 67, 173-176. Guillot, J., E. Gueho, M. Lesourd, G. Midgley, G. Chevrier and B. Dupont. 1996. Identification of Malassezia species, a practical approach. J. Mycol. Med. 6, 103-110. Guiraud, J.P, J.M. Caillaud and P Galzy. 1982. Optimization of alcohol production from Jerusalem artichokes. Eur. J. Appl. Microbiol. Biotechnol. 14, 81-85. Gunge, N., A. Tamuru, F. Ozawa and K. Sakaguchi. 1981. Isolation and characterization of linear deoxyribonucleic acid plasmids fi-om

Kluyueromyces lactis and the plasmid-associated killer character. J. Bacteriol. 145, 382-390. Gustafson, B.A. 1955. Otitis externa in the dog. A bacteriological and experimental study, Thesis. Stockholm. Gutell, R.R., and G.E. Fox. 1988. Compilation of large subunit RNA sequences presented in a structural format. Nucleic Acids Res. 16, rl75-r269. Guth, E., T. Hashimoto and S.F. Conti. 1972. Morphogenesis of ascospores in Saccharomyces cereuisiae. J. Bacteriol. 109, 869-880. Gyllenberg, M. 1986. The size and scar distribution of the yeast Saccharomyces cereuisiae. J. Math. Biol. 24, 81-101. Hadrys, H., M. Balick and B. Schierwater. 1992. Applications of random amplified polymorphic DNA (RAPD) in molecular ecology. Mol. Ecol. 1, 55-63. Hagan, I.M., and J.S. Hyams. 1988. The use of cell division mutants to investigate the control of microtubule distribution in the fission yeast Schizosaccharomyces pombe. J. Cell Sci. 89, 343-357. Hagler, A.N., and D.G. Aheam. 1981. Rapid diazonium blue B test to detect basidiomycetous yeasts. Int. J. Syst. Bacteriol. 31, 204-208. Hagler, A.N., and D.G. Aheam. 1987. Ecology of aquatic yeasts. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. 2, Yeasts and the Environment. Academic Press, London, pp. 181-205. Hagler, A.N., and L.C. Mendonga-Hagler. 1991. A Diazonium blue B test for yeasts grown on yeast carbon base-urea agar. Rev. Microbiol. Sao Paulo 22, 71-74. Hagler, A.N., L.C. Mendonga-Hagler and H.J. PhafiF. 1989. Candida populi, a new species of yeast occurring in the exudates of Populus and Betula species. Int. J. Syst. Bacteriol. 39, 97-99. Hajsig, M. 1958. Torulopsis apicola nov. spec, new isolates from bees. Antonie van Leeuwenhoek 24, 18-22. Hallewell, R.A., R. Mills, P Tekamp-Olson, R. Blacher, S. Rosenberg, F. Otting, F.R. Masiarz and C.J. Scandella. 1987. Amino terminal acetylation of authentic human Cu, Zn superoxide dismutase produced in yeast. Bio/Technology 5, 363-366. Hamajima, K., A. Nishikawa, T. Shinoda and Y Fukazawa. 1987. Deoxyribonucleic acid base composition and its homology between two forms of Candida parapsilosis and Lodderomyces elongisporus. J. Gen. Appl. Microbiol. 33, 299-302. Hamajima, K., A. Nishikawa, T. Shinoda and Y Fukazawa. 1988. Detection and specificity of a new antigen in Candida tropicalis and its evaluation by taxonomic DNA analyses. Microbiol. Immunol. 32, 1013-1024. Hamamoto, M., J. Sugiyama, S. Goto and K. Komagata. 1986a. Numerical taxonomy based on the electrophoretic mobility of enzymes in the genera Rhodosporidium, Cystofilobasidium and Rhodotorula. J. Gen. Appl. Microbiol. 32, 89-99. Hamamoto, M., J. Sugiyama and K. Komagata. 1986b. DNA base composition of strains in the genera Rhodosporidium, Cystofilobasidium, and Rhodotorula determined by reversed-phase high-performance liquid chromatography. J. Gen. Appl. Microbiol. 32, 215-223. Hamamoto, M., J. Sugiyama and K. Komagata. 1987. DNA-DNA reassociation studies of strains in the genera Rhodosporidium and Rhodotorula. J. Gen. Appl. Microbiol. 33, 57-73. Hamamoto, M., J. Sugiyama and K. Komagata. 1988a. Rhodosporidium kratochuilouae sp. nov, a new basidiomycetous yeast species. J. Gen. Appl. Microbiol. 34, 119-125. Hamamoto, M., J. Sugiyama and K. Komagata. 1988b. Transfer of Rhodosporidium infirmominiatum to the genus Cystofilobasidium as Cystofilobasidium infirmominiatum comb. nov. J. Gen. Appl. Microbiol. 34, 271-278. Hamamoto, M., J. Sugiyama and K. Komagata. 1988c. Transfer of Rhodotorula hasegawae to a new basidiomycetous genus Erythrobasidium as Erythrobasidium hasegawae comb. nov. J. Gen. Appl. Microbiol. 34, 279-287. Hamamoto, M., J. Sugiyama and K. Komagata. 1991. Nomenclature of the basidiomycetous yeast species Erythrobasidium hasegawae. J. Gen. Appl. Microbiol. 37, 131-132.

References Hammer, B.W. 1919. Studies on formation of gas in sweetened condensed milk. Iowa State Coll. Agr. Exp. St. Research Bull. 54, 211-220. Hammer, B.W., and W.A. Cordes. 1920. A study of lactose-fermenting yeasts in "yeasty" cream. Agric. Exp. Stat. Iowa State Coll. Agric. Mech. Arts Res. Bull. 61, 1-24. Hammond, J.R.M. 1988. Brewery fermentation in the future. J. Appl. Bacteriol. 65, 169-177. Hanawa, S. 1920. Studien uber die auf gesunder und kranker Haut angesiedelten Pilzkeime. Japan. J. Dermatol. Urol. 20, 103-131. Hanes, S.D., VE. Bum, S.L. Sturley, D.J. Tipper and K.A. Bostian. 1986. Expression of a cDNA derived from the yeast killer preprotoxin gene: implications for processing and immunity. Proc. Natl. Acad. Sci. USA 83, 1675-1679. Hansen, E.C. 1883. Undersogelser over alkoholgjaersvampenes fysiologi og morfologi. II. Om askosporedannelsen hos slaegten Saccharomyces. Medd. Carlsberg Lab. 2, 29-86. Hansen, E.C. 1888a. Recherches sur la physiologic et la morphologic des ferments alcooliques. VII. Action des ferments alcooliques sur les diverses especes de sucre. C.R. Trav. Lab. Carlsberg 2, 143-167. Hansen, E.C. 1888b. Unders0gelser over alkoholgjaensvampenes fysiologi og morfologi. VII. Om alkoholgjaersvampenes forhold til sukkerarteme. Medd. Carlsberg Lab. 2, 220-256. Hansen, E.C. 1889. Ueber die im Schleimflusse lebender Baume beobachteten Mikroorganismen. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 5, 632-640. Hansen, E.C. 1891. Sur la germination des spores chez les Saccharomyces. Ann. Micrographic. 3, 449-474. Hansen, E.C. 1904. Grundlinien zur Systematik der Saccharomyceten. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 12, 529-538. Hansen, E.C. 1908. Recherches sur la physiologic et la morphologic des ferments alcooliques. XIII. Nouvelles etudes sur les levures de brasserie a fermentation basse. C.R. Trav. Lab. Carlsberg 7, 179-217. Hara, N., Y. Tubota, K. Saito and T. Suto. 1989. Biochemical characteristics and ubiquinone of 44 strains of Trichosporon beigelii and related organisms. J. Gen. Appl. Microbiol. 35, 1-10. Harrison, EC. 1927. Cheese torulae. Trans. R. Soc. Canada, 3rd Ser. 21, Sect. 5, 341-380. Harrison, EC. 1928. A systematic study of some torulae. Trans. R. Soc. Can., Sect. V, 22, 187-225. Hartmann, M. 1903. Eine rassenspaltige Torula-Art, welche nur zeitweise Maltose zu vergaren vermag (Torula colliculosa n. sp.). Wochenschr. Brau. 20, 113-114. Hartwell, L.H. 1974. Saccharomyces cerevisiae cell cycle. Bacteriol. Rev. 38, 164-198. Hasegawa, T. 1958. Studies on the genus Rhodotorula (II). The mycological properties of the Rhodotorula strains preserved in Japan. J. Ferment. Technol. (Japan) 36, 194-202. Hasegawa, T. 1959. The lactose assimilating species in the genus Rhodotorula. J. Gen. Appl. Microbiol. 5, 30-34. Hasegawa, T. 1965. A report on the taxonomy of red to orange Rhodotorula. Ann. Rep. Inst. Ferment. Osaka 2, 1-25. Hasegawa, T, and I. Banno. 1958. Studies on the genus Rhodotorula (III). On the nitrate utilization of Rhodotorula. J. Ferment. Technol. (Japan) 36, 403-406. Hasegawa, T., and I. Banno. 1964. Rhodotorula infirmo-miniata (Okunuki) comb. n. Antonie van Leeuwenhoek 30, 65-67. Hasegawa, T, I. Banno and S. Yamauchi. 1960. A taxonomic study on the genus Rhodotorula. J. Gen. Appl. Microbiol. 6, 196-215. Haskins, R.H., and J.F.T. Spencer. 1967. Trichosporonoides oedocephalis n. gen., n. sp. I. Morphology, development, and taxonomy. Can. J. Bot. 45, 515-520. Hausner, G., J. Reid and G.R. Klassen. 1992. Do galeateascospore members of the Cephaloascaceae, Endomycetaceae and Ophiostomataceae share a common phylogeny? Mycologia 84, 870881. Hawksworth, D.L., B.C. Sutton and G.C. Ainsworth. 1983. Ainsworth

973

and Bisby's Dictionary of the Fungi, 7th edn. CAB Commonwealth Mycological Institute, Kew, 445pp. Hawksworth, D.L., PM. Kirk, B.C. Sutton and D.N. Pegler. 1995. Ainsworth & Bisby's Dictionary of the Fungi, 8th edn. CAB International, Wallingford, UK, 616pp. Hawthorne, D. 1963. Directed mutation of the mating type alleles as an explanation of homothallism in yeast. Proc. 11th Int. Congr. Gent. 1, 34-35. Hawthorne, D., and P. Philippsen. 1994. Genetic and molecular analysis of hybrids in the genus Saccharomyces involving S. cerevisiae, S. uvarum and a new species S. douglasii. Yeast 10, 1285-1296. Hayles, J., and P. Nurse. 1989. A review of mitosis in the fission yeast Schizosaccharomyces pombe. Exp. Cell Res. 184, 273-286. Hayman, G.T., and PL. Bolen. 1990. Linear DNA plasmids of Pichia inositovora are associated with a novel killer toxin activity. Yeast 6(spec. issue), S548. Haynes, K.A., T.J. Westerneng, J.W. Fell and W. Moens. 1995. Rapid detection and identification of pathogenic fungi by polymerase chain reaction amplification of large subunit ribosomal DNA. J. Med. Vet. Mycol. 33,319-325. Healy, M.E., C.L. Dillavon and G.E. Taylor. 1977. Diagnostic medium containing inositol, urea, and caffeic acid for selective growth of Cryptococcus neoformans. J. Clin. Microbiol. 6, 387-391. Heard, G.M., and G.H. Fleet. 1987. Occurrence and growth of killer yeasts during wine fermentation. Appl. Environm. Microbiol. 53, 2171-2174. Heath, LB. 1981. Nucleus-associated organelles in fungi. Int. Rev. Cytol. 69, 191-221. Heath, LB. 1990. The roles of actin in tip growth in fungi. Int. Rev. Cytol. 123, 95-127. Heath, LB., and M.C. Heath. 1976. Ultrastructure of mitosis in the cowpea rust fungus Uromyces phaseoli var. uignae. J. Cell Biol. 70, 592-607. Heath, LB., M.-L. Ashton, K. Rethoret and M.C. Heath. 1982. Mitosis and the phylogeny of Taphrina. Can. J. Bot. 60, 1696-1725. Heath, LB., M.L. Ashton and S.G.W. Kamlinskyj. 1987. Mitosis as a phylogenetic marker among the yeasts - review and observations on novel mitotic systems in freeze substituted cells of the Taphrinales. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 279297 (Stud. Mycol. 30, 279-297). Hedrick, L.R. 1976. Candida fluviatilis sp. nov. and other yeasts from aquatic environments. Antonie van Leeuwenhoek 42, 329-332. Hedrick, L.R., and G.C. Burke. 1951. Two new yeasts from Hawaiian fruit flies. Mycopathol. Mycol. Appl. 6, 92-95. Hedrick, L.R., and PD. Dupont. 1968. Two new yeasts: Trichosporon aquatile and Trichosporon eriense spp. n. Antonie van Leeuwenhoek 34, 474-482. Heefher, D.L., C.A. Weaver, M.J. Yarns and L.A. Burdzinski. 1992. Method for producing riboflavin with Candida famata. U.S. Patent 5 164303. Heefner, D.L., A. Boyts, L.A. Burdzinski and M. Yarns. 1993. Efficient riboflavin production with yeast. U.S. Patent 5231007. Heifer, W. 1991. Pilze auf Fruchtkorpern. Untersuchungen zur Okologie, Systematik und Chemie. Libri Bot. 1, 1-157. Hemmingway, LS. 1980. International infection of juncea mustard seed by Nematospora yeast. Rev. Progress Rept. Reckitt and Colman Ltd., Norwich, UK. Hendricks, L., A. Goris, Y Van de Peer, J.-M. Neefs, M. Vancanneyt, K. Kersters, G.L. Hennebert and R. de Wachter. 1991. Phylogenetic analysis of five medically important Candida species on the basis of small ribosomal subunit RNA sequences. J. Gen. Microbiol. 137, 1223-1230. Hendriks, L., A. Goris, Y. Van de Peer, L-M. Neefs, M. Vancanneyt, K. Kersters, J.-F Berny, G.L. Hennebert and R. De Wachter. 1992. Phylogenetic relationships among ascomycetes and ascomycete-like yeasts as deduced from small ribosomal subunit RNA sequences. Syst. Appl. Microbiol. 15, 98-104.

974

References

Henneberg, W. 1926. Handbuch der Garungsbakteriologie. II. 2te Aufl. Berlin. Henninger, W., and S. Windisch. 1975a. Pichia lindnerii sp. n., eine neue Methanol assimilierende Hefe aus Erde. Arch. Microbiol. 105, 47-48. Henninger, W., and S. Windisch. 1975b. A new yeast of Sterigmatomyces, S. aphidis sp. n. Arch. Microbiol. 105, 49-50. Henninger, W., and S. Windisch. 1976a. Kluyveromyces blattae sp. n., eine neue vielsporige Hefe aus Blatta orientalis. Arch. Microbiol. 109, 153-156. Henninger, W, and S. Windisch. 1976b. Torulopsis spandovensis sp. n., a new yeast from beer. Arch. Microbiol. 107, 205-206. Hennings, P.C. 1902. Engler's Bot. Jahrb. 32, 34. Henriques, M., I. Sa-Nogueira, G. Gimenez-Jurado and N. van Uden. 1991. Ribosomal DNA spacer probes for yeast identification: studies in the genus Metschnikowia. Yeast 7, 167-172. Herman, A.I. 1970. Interspecies sex-specific growth responses in Kluyveromyces. Antonie van Leeuwenhoek 36, 421-425. Herman, A.I. 1971a. Mating responses in the yeast Hansenula holstii. Antonie van Leeuwenhoek 37, 275-280. Herman, A.I. 1971b. Mating responses in Candida lipolytica. J. Bacteriol. 107, 371. Herman, A.I., L.J. Wickerham and P. Griffin. 1966. Allelic determinants of agglutination in the yeast Hansenula wingei. Genetics 54, 339. Hermanides-Nijhof, E.J. 1977. Aureobasidium and allied genera. Stud. Mycol. 15, 140-177. Herrera, T., and M. Ulloa. 1978. Descripcion de una especie nueva de levadura Candida queretana, aislada del tepache de queretaro, Mexico. Bol. Soc. Mex. Micol. 12, 13-18. Herrera, T., M. Ulloa and I. Fuentes. 1973. Descripcion de una especie nueva de Hansenula y una variedada nueva de Candida parapsilosis aisladas del pozol. Bol. Soc. Mex. Microbiol. 7, 17-26. Herskowitz, I. 1988. Life cycle of the budding yeast Saccharomyces cereuisiae. Microbiol. Rev. 52, 536-553. Hesseltine, C.W, and C.P. Kurtzman. 1990. Yeasts in amylolytic food starters. Anal. Inst. Biol. Univ. Nac. Auton. Mexico, Ser. Bot. 60, 1-7. Hicks, J.B., and I. Herskowitz. 1976. Interconversion of yeast mating types. I. Direct observations on the action of the homothallism (HO) gene. Genetics 83, 245-258. Higham, J. 1970. Studies in the genus Sporidiobolus, MSC Thesis. University of British Columbia, BC. Hijwegen, T. 1986. Biological control of cucumber powdery mildew by Tilletiopsis minor Neth. J. PI. Pathol. 92, 93-95. Hijwegen, T. 1988. Effect of seventeen fungicolous fungi on sporulation of cucumber powdery mildew. Neth. J. PI. Pathol. 94, 185-190. Hillis, D.M., J.P. Huelsenbeck and C.W. Cunningham. 1994. Application and accuracy of molecular phylogenies. Science 264, 671-677. Hinzelin, R, and P. Lectard. 1978. Les levures duhs les eaux de la Moselle. Hydrobiologia 61, 209-224. Hinzelin, E, C.P. Kurtzman and M.Th. Smith. 1991. Williopsis salicorniae sp. nov. Antonie van Leeuwenhoek 59, 125-127. Hirata, A., E. Tsuchiya, S. Fukui and K. Tanaka. 1980. An electron microscopic study on the mating tube formation in the heterobasidiomycete Tremella mesenterica. Arch Microbiol. 128, 215221. Hiratsuka, Y, and S. Sato. 1982. Morphology and taxonomy of rust fiingi. In: K.J. Scot and A.K. Chakravorty (Eds.), The Rust Fungi. Academic Press, London, pp. 1-36. Hirosawa, N., and H. Takada. 1969. Salt susceptibility of Rhodotorula glutinis var. salinaria isolated from salt foam in Japan. Trans. Mycol. Soc. Japan 10, 35-39. Hitzeman, R.A., D.W Leung, L.J. Perry, W.J. Kohr, RE. Hagie, C.Y Chen, J.M. Lugovoy, A. Singh, H.L. Levine, R. Wetzel and D.V Goeddel. 1982. Expression, processing, and secretion of heterologous gene products by yeast. Proc. Berkeley Workshop, Recent Advances in Yeast Molecular Biology: Recombinant DNA. University of Cahfomia Press, pp. 173-190. Hitzeman, R.A., D.W. Leung, L.J. Perry, W.J. Kohr, H.L. Levine and

D.V. Goeddel. 1983. Secretion of human interferons by yeast. Science 219, 620-625. Hjort, A. 1954. Some studies on the genus Saccharomycodes Hansen. C.R. Trav Lab. Carlsberg, Ser. Physiol. 25, 259-284. Hoch, H.C., and R.J. Howard. 1980. Ultrastructure of freeze-substituted hyphae of the basidiomycete Laetisiana arualis. Protoplasma 103, 281-297. Hoch, H.C., and R.J. Howard. 1981. Conventional chemical fixations induce artificial swelling of dolispore septa. Exp. Mycol. 5, 167-172. Hoch, H.C., and R. Provvidenti. 1979. Mycoparasitic relationships: cytology of the Sphaerotheca fuliginea-Tilletiopsis sp. interaction. Phytopathology 69, 359-362. Hocking, A.D., and J.I. Pitt. 1981. Trichosporonoides nigrescens sp. nov, a new xerophilic yeast-like fungus. Antonie van Leeuwenhoek 47, 411-421. Hoeben, P., and G.D. Clark-Walker. 1986. An approach to yeast classification by mapping mitochondrial DNA fi-om Dekkera/ Brettanomyces and Eeniella genera. Curr. Genet. 10, 371-379. Hoeben, P., G. Weiller and G.D. Clark-Walker. 1993. Larger rearranged mitochondrial genomes in Dekkera/Brettanomyces yeasts are more closely related than smaller genomes with a conserved gene order. J. Mol. Evol. 36, 263-269. Hohl, H.R. 1987. Cytology and morphogenesis of fungal cells. Prog. Bot. 49, 13-28. HoUenberg, C.P, P. Borst and E.F.J, van Brugger. 1970. Mitochondrial DNA. V A 25-|i closed circular duplex molecule in wild-type yeast mitochondria. Structure and kinetic complexity. Biochim. Biophys. Acta 209, 1-15. Holley, R.A., and G.E. Timbers. 1983. Nematospora destruction in mustard seed by microwave and moisture treatments. Can. Inst. Food Sci. Technol. J. 16, 68-75. Holley, R.A., R Allan-Wojtas and B.E. Phipps-Todd. 1984. Nematospora sinecauda sp. nov, a yeast pathogen of mustard seeds. Antonie van Leeuwenhoek 50, 305-320. Holmberg, S. 1982. Genetic differences between Saccharomyces carlsbergensis and S. cereuisiae. II. Restriction endonuclease analysis of genes of chromosome III. Carlsberg Res. Commun. 47, 233-244. Holmquist, R., M.M. Miyamoto and M. Goodman. 1988. Analysis of higher-primate phylogenyfi-omtransversion differences in nuclear and mitochondrial DNA by Lake's method of evolutionary parsimony and operator metrics. Mol. Biol. Evol. 5, 217-236. Hoist, E.C. 1936. Zygosaccharomyces pini, a new species of yeast associated with bark beetles in pines. J. Agric. Res. 53, 513-518. Holtermann, C. 1898. Mykologische Untersuchungen aus den Tropen. Berlin, 122pp. Holtz, W. 1901. Beitrag zur Kenntnis der Baumfliisse und einiger ihrer Bewohner. Zentralbl. Bakteriol. Parasitenkd. Abt. 2, 7, 179-189. Holzschu, D.L. 1981. Molecular taxonomy and evolutionary relationships among cactophilic yeasts. Thesis. University of California, Davis, CA. Holzschu, D.L., and H.J. Phaff. 1982. Taxonomy and evolution of some ascomycetous cactophilic yeasts. In: J.S.R Barker and WT. Starmer (Eds.), Ecological Genetics and Evolution, The cactusyeast-Drosophila model system. Academic Press, Sydney, pp. 127141. Holzschu, D.L., H.L. Presley, M. Miranda and H.J. Phaff. 1979. Identification of Candida lusitaniae as an opportunistic yeast in humans. J. Clin. Microbiol. 10, 202-205. Holzschu, D.L., J. Tredick and H.J. Phaff. 1981. Validation of the yeast Sporidiobolus ruinenii based on its DNA relatedness to other species of the genus Sporidiobolus. Curr. Microbiol. 5, 11)-16. Holzschu, D.L., H.J. Phaff, J. Tredick and D. Hedgecock. 1983. Pichia pseudocactophila, a new species of yeast occurring in necrotic tissue of columnar cacti in the North American Sonoran Desert. Can. J. Microbiol. 29, 1314-1322. Holzschu, D.L., H.J. Phaff, J. Tredick and D. Hedgecock. 1985. Resolution of the varietal relationship within the species Pichia

References opuntiae and establishment of a new species, Pichia thermotolerans comb. nov. Int. J. Syst. Bacteriol. 35, 4 5 7 ^ 6 1 . Hopfer, R.L., and F. Blank. 1975. CafFeic acid-containing medium for identification of Cryptococcus neoformans. J. Clin. Microbiol. 2, 115120. Hopfer, R.L., and D. Groschel. 1975. Six hour pigmentation test for the identification of Cryptococcus neoformans. J. Clin. Microbiol. 2, 96-98. Hopsu-Havu, VK., E. Tunnela and D. Yarrow. 1978. Candida sonckii sp. nov. Antonie van Leeuwenhoek 44, 4 2 5 ^ 3 8 . Horgan, J. 1994. Profile: Edward O. Wilson. Sci. Am. 270, 36-^1. Hori, H., and S. Osawa. 1979. Evolutionary change in 5S RNA secondary structure and a phylogenetic tree of 54 5S RNA species. Proc. Natl. Acad. Sci. USA 76, 381-385. Horio, T., S. Uzawa, M.K. Jung, B.R. Oakley, K. Tanaka and M. Yanagida. 1991. The fission yeast y-tubulin is essential for mitosis and is localized at the microtubule organizing centers. J. Cell Sci. 99, 693-700. Horisberger, M., and M.-F. Clerc. 1988. Ultrastructural localization of anionic sites on the surface of yeast, hyphal and germ-tube forming cells of Candida albicans. Eur. J. Cell Biol. 46, 4 4 4 ^ 5 2 . Horisberger, M., and M. Rouvet-Vauthey. 1985. Cell wall architecture of the fission yeast Schizosaccharomyces pombe. Experientia 41, 7 4 8 750. Hosoya, T., and Y. Otani. 1995. Gelatinipulvinella astraeicola gen. et sp. nov., a fimgicolous discomycete and its anamorph. Mycologia 87, 689-696. Hossack, J.A., and I. Spencer-Martins. 1978. Lipid composition of the yeast Lipomyces kononenkoae. Eur. J. Appl. Microbiol. 5, 273-278. Howard, K.L., and R.T. Moore. 1970. Ultrastructure of oogenesis in Saprolegnia terrestris. Bot. Gazette 131, 311-336. Howard, R.J. 1981. Ultrastructural analysis of hyphal tip cell growth in fungi: Spitzenkorper, cytoskeleton and endomembranes after freezesubstitution. J. Cell Sci. 48, 89-103. Howard, R.J., and J.R. Aist. 1979. Hyphal tip cell ultrastructure of the fungus Fusarium: improved preservation by freeze-substitution. J. Ultrastruct. Res. 66, 224-234. Hunt, D.E., and P.L. Carpenter. 1963. Sterols as components in the mating reaction of Hansenula wingei. J. Bacteriol. 86, 845-847. Hurley, R., J. de Louvois and A. Mulhall. 1987. Yeasts as human and animal pathogens. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. I, Biology of Yeasts. Academic Press, London, pp. 207-281. Huss, VA.R., and M.L. Sogin. 1990. Phylogenetic position of some Chlorella species within the Chlorococcales based upon complete small-subunit ribosomal RNA sequences J. Mol. Evol. 31, 4 3 2 ^ 4 2 . Huss, VA.R., K.H. Wein and E. Kessler. 1988. Deoxyribonucleic acid reassociation in the taxonomy of the genus Chlorella. Arch. Microbiol. 150, 509-511. Hussein, L., S. El Sayed and S. Foda. 1989. Reduction of lactose in milk by purified lactase produced by Kluyueromyces lactis. J. Food Prot. 52, 30-34. Hutchins, K., and H. Bussey. 1983. Cell wall receptor for yeast killer toxin: involvement of (1 -^ 6)-|3-D-glucan. J. Bacteriol. 154, 161-169. Hutchinson, L.J., and R.C. Summerbell. 1990. Studies on the systematics of ectomycorrhizal fungi in axenic culture. Reactions of mycelia to diazonium blue B stain. Mycologia 82, 3 6 ^ 2 . lizuka, H., and S. Goto. 1965. Microbiological studies on petroleum and natural gas. VIII. Determination of red yeasts isolated from oil brines and related materials. J. Gen. Appl. Microbiol. 11, 331-337. lizuka, H., and K. Komagata. 1965. Microbiological studies on petroleum and natural gas. V Microflora of Yabase and Nishiyama oil fields in Japan. J. Gen. Appl. Microbiol. 2, 91-102. lizuka, H., J. Shimizu, K. Ishii and Y Nakajima. 1967. Verfahren zur biotechnischen Herstellung von Zitronsaure und ihren Salzen durch Mikroorganismen. German Patent 1 812710. Imshenetskii, A.A., and A.E. Kriss. 1933. Materiaux pour I'etude des fiingi imperfecti 1. Un nouveau champignon, le Mastigomyces

975

phillippoui (nov. gen. nov. sp.) trouve sur les fruits de Terminalia chebula. Dokl. Akad. Nauk SSSR 7, 111-116. In Russian. Inglis, G.D., L. Sigler and M.S. Goettel. 1992. Trichosporonoides megachiliensis, a new hyphomycete associated with alfalfa leafcutter bees, with notes on Trichosporonoides and Moniliella. Mycologia 84, 555-570. Ingold, C.T. 1982a. Basidiospore germination and conidium formation of Exidia glandulosa and Tremella mesenterica. Trans. Br. Mycol. Soc. 79, 370-373. Ingold, C.T. 1982b. Basidiospore germination in Tremella foliacea. Trans. Br. Mycol. Soc. 79, 561-563. Ingold, C.T. 1983. The basidium in Ustilago. Trans. Br. Mycol. Soc. 81, 573-584. Ingold, C.T. 1985. Observations on spores and their germination in certain Heterobasidiomycetes. Trans. Br. Mycol. Soc. 85, 4 1 7 ^ 2 3 . Ingold, C.T. 1986. Bensingtonia ciliata gen. et sp. nov., a ballistosporic fungus. Trans. Br. Mycol. Soc. 86, 325-328. Ingold, C.T. 1988. Further observations on Bensingtonia ciliata. Trans. Br. Mycol. Soc. 91, 162-166. Inui, T. 1901. Untersuchungen iiber die niederen Organismen welche sich bei der Zubereitung des alkoholischen Getrankes 'Awamori' beteiligen. J. Coll. Sci., Imp. Coll. Tokyo 15, 465-476. Ishibashi, Y, Y Sakagami, A. Isogai, A. Suzuki and R.J. Bandoni. 1983a. Sex hormones of Tremella brasiliensis. Peptide Chem. 1982, 201-206. Ishibashi, Y, Y Sakagami, A. Isogai, A. Suzuki and R.J. Bandoni. 1983b. Isolation of tremerogens A-9291-1 and A-9291-11, novel hormones of Tremella brasiliensis. Can. J. Biochem. 61, 796-801. Ito, H., H. lizuka and T. Sato. 1974. A new radio-resistant yeast of Trichosporon oryzae nov. sp. isolated from rice. Agric. Biol. Chem. 38, 1597-1620. Iwaguchi, S.I., M. Homma and K. Tanaka. 1990. Variation in the electrophoretic karyotype analysed by the assignment of DNA probes in Candida albicans. J. Gen. Microbiol. 136, 2433-2442. Jackson, H.S. 1947. Trichomonascus, a new genus among simple Ascomycetes. Mycologia 39, 709-715. Jacob, F.H. 1969a. Pichia tannicola, nouvelle espece de levure isolee de liqueurs tannantes vegetales. Bull. Soc. Mycol. France 85, 111-115. Jacob, F.H. 1969b. Pichia adzetii et Pichia abadiae, nouvelles especes de levures isolees de liqueurs tannantes vegetales. Bull. Soc. Mycol. France 85, 117-127. Jacob, F.H. 1970. Deux especes nouvelles de levures asporogenes isolees de liqueurs tannantes vegetales. Ann. Inst. Pasteur 118, 207-213. Jacob, F.H., M. Faure-Raynaud and M.C. Berton. 1979. Torulopsis pilati nov. sp., une nouvelle espece de levure isolee de la litiere du sapin d'Abies alba Mill. Mycopathologia 69, 83-85. Jacobson, G.K., and S.O. Jolly. 1989. Yeasts, molds, and algae. In: G.K. Jacobson and S.O. Jolly (Eds.), Biotechnology, Vol 7b. VCH, Weinheim, pp. 279-314. Jahnke, K.-D. 1987. Assessing natural relationships by DNA analysis techniques and applications. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 227-246 (Stud. Mycol. 30, 227-246). James, S.A., M.D. Collins and I.N. Roberts. 1994a. The genetic relationship of Lodderomyces elongisporus to other ascomycete yeast species as revealed by small-subunit rRNA gene sequences. Lett. Appl. Microbiol. 19,308-311. James, S.A., M.D. Collins and I.N. Roberts. 1994b. Genetic interrelationship among species of the genus Zygosaccharomyces as revealed by small-subunit rRNA gene sequences. Yeast 10, 871-881. James, S.A., M.D. Collins and I.N. Roberts. 1996. Use of an rRNA internal transcribed spacer region to distinguish phylogenetically closely related species of the genera Zygosaccharomyces and Torulaspora. Int. J. Syst. Bacteriol. 46, 189-194. James, S.A., J. Cai, I.N. Roberts and M.D. Collins. 1997. A phylogenetic analysis of the genus Saccharomyces based on 18S rRNA gene sequences: description of Saccharomyces kunashirensis sp. nov. and Saccharomyces martiniae sp. nov. Int. J. Syst. Bacteriol. 47, 4 5 3 ^ 6 0 . Janke, A. 1924. Allgemeine Technische Mikrobiologie. I. Teil: Die

976

References

Mikroorganismen. Technische Fortschrittberichte Band IV, Verlag SteinkopfF, Dresden und Leipzig. Janke, A. 1928. Uber die Foraigattung Kloeckera Janke. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 76, 161. Janke, A. 1930. Mycoderma lafarii n, sp. Arch. Mikrobiol. 1, 176-180. Janke, A. 1954. Sporobolomyces roseus var. madurae var. nov. und die Beziehungen zwischen den Genera Sporobolomyces und Bullera. Zentralbl. Bakteriol. Parasitenkd., Orig. 161, 514-520. Janowicz, A., U. Henning and C.P. HoUenberg. 1982. Synthesis of Escherichia colt outer membrane OmpA protein in yeasts. Gene 20, 347-358. Jarl, K. 1969. Symba yeast process. Food Technol. 23, 1009-1012. Jarvis, W.R., L.A. Shaw and J.A. Traquair. 1989. Factors affecting antagonism of cucumber powdery mildew by Stephanoascus flocculosus and S. rugulosus. Mycol. Res. 92, 162-165. Jeng, W., M.P Steinberg, R.A. Speckman and R.E. Crang. 1989. Enhanced conversion of lactose to glycerol by Kluyveromyces fragilis utilizing whey permeate as a substrate. Appl. Env. Microbiol. 55, 573578. Jensen, V 1967. Taxonomic studies on soil yeasts. 1. The genus Saccharomyces (Meyen) Reess. K. Vet. Landboh. Arsskr. 179-194. Johannsen, E. 1980. Hybridization studies within the genus Kluyveromyces. Antonie van Leeuwenhoek 46, 177-189. Johannsen, E. 1981. Hybridization studies within the genus Schizosaccharomyces Lindner. Can. J. Microbiol. 27, 184-191. Johannsen, E., and J.P. van der Walt. 1978. Interfertility as basis for the delimitation of Kluyveromyces marxianus. Arch. Microbiol. 118, 45^8. Johnson, B.R, G.B. Calleja, B.Y. Yoo, M. Zuker and I.J. McDonald. 1982. Cell division: key to cellular morphogenesis in the fission yeast Schizosaccharomyces. Int. Rev. Cytol. 75, 167-208. Johnson, D.A., J.D. Rogers and K.M. Regnier. 1988. A soft rot of onion caused by the yeast Kluyveromyces marxianus var. marxianus. Plant Dis. 359-361. Johnson, E.A., and M.J. Lewis. 1979. Astaxanthin formation by the yeast Phaffia rhodozyma. J. Gen. Microbiol. 115, 173-183. Johnson, E.A., and H.J. Phaflf. 1978. Rhodotorula fujisanensis, a new taxonomic combination. Curr. Microbiol. 1, 223-225. Johnson, E.A., D.E. Conklin and M.J. Lewis. 1977. The yeast Phaffia rhodozyma as a dietary pigment source for salmonids and crustaceans. J. Fish Res. Bd. Canada 34, 2417-2421. Johnson, E.A., T.G. Villa, M.J. Lewis and H.J. Phaff. 1978. A simple method for the isolation of astaxanthin from the basidiomycetous yeast, Phaffia rhodozyma. Appl. Environ. Microbiol. 35, 1155-1159. Johnson, E.A., T.G. Villa, M.J. Lewis and H.J. Phaff. 1979. Lysis of the cell wall of the yeast Phaffia rhodozyma by a lytic enzyme complex from Bacillus circulans WL-12, J. Appl. Biochem. 1, 273-282. Johnson, E.A., M.J. Lewis and C.R. Grau. 1980a. Pigmentation of egg yolks with astaxanthinfi"omthe yeast Phaffia rhodozyma. Poultry Sci. 59, 1777-1782. Johnson, E.A., T.G. Villa and M.J. Lewis. 1980b. Phaffia rhodozyma as an astaxanthin source in animal diets. Aquaculture 20, 123-134. Johnson, G. 1905. Saccharomyces thermantitonum. J. Inst. Brewing 11, 466-490. Johnson, J.L. 1973. Use of nucleic acid homologies in the taxonomy of anaerobic bacteria. Int. J. Syst. Bacteriol. 23, 308-315. Johnson, J.L. 1981. Genetic characterization. In: P. Gerhardt (Ed.), Manual of Methods for General Bacteriology. American Society for Microbiology, Washington, DC, pp. 450-472. Johnson-Reid, J.A., and R.T. Moore. 1972. Some ultrastructural features of Rhodosporidium toruloides Banno. Antonie van Leeuwenhoek 38, 417^35. Johnston, J.R., and R.K. Mortimer. 1986. Electrophoretic karyotyping of laboratory and commercial strains of Saccharomyces and other yeasts. Int. J. Syst. Bacteriol. 36, 569-572. Johnston, J.R., R.C. Contopoulou and R.K. Mortimer. 1988. Karyotyping of yeast strains of several genera by field inversion gel electrophoresis. Yeast 4, 191-198.

Johri, B.N., and R.J. Bandoni. 1984. Taxonomy of the sporobolomycetous genus Bullera. In: Proc. Int. Symp. on Taxonomy of Fungi, Madras 1973. Part 2, pp. 536-547. Jones, C.P, and D.S. Martin. 1938. Identification of yeast-like organisms isolated from the vaginal tracts of pregnant and non-pregnant women. Ann. J. Obstet. Gynecol. 35, 98-106. Jones, E.B.G., and WCh. Slooflf. 1966. Candida aquatica sp. n. isolated from water scums. Antonie van Leeuwenhoek 32, 223-228. Jones, J.M. 1990. Laboratory diagnosis of invasive candidiasis. Clin. Microbiol. Rev 3, 32-45. Jones, M.G., and W.C. Noble. 1982. An electrophoretic study of enzymes as a tool in the taxonomy of the Dermatophytes. J. Gen. Microbiol. 128, 1101-1107. Jong, S.-C, and D.S. King. 1977a. The synonym of Sterigmatomyces penicillatus and Sterigmatomyces polyborus. Mycotaxon 6, 6-10. Jong, S.-C, and D.S. King. 1977b. Identity of Sterigmatomyces aphidis and Trichosporon oryzae. Mycotaxon 6, 11-16. Jong, S.-C, and F.-L. Lee. 1986. The new species Dekkera naardenensis, teleomorph of Brettanomyces naardenensis. Mycotaxon 25, 147-152. Joo, W.H., J. Sugiyama and K. Komagata. 1988. A colorless variant derived from Rhodosporidium toruloides strain YK 212 (lAM 13509, IFO 1236) and its taxonomic implication. J. Gen. Appl. Microbiol. 34, 387-390. Jorgensen, A. 1898. Die Mikroorganismen der Garungsindustrie, 4te Aufl. P. Parey, Berlin. Jorgensen, A. 1909. Die Mikroorganismen der Garungsindustrie, 5te Aufl. P Parey, Berlin. Joshi, K.R., and J.B. Gavin. 1974. A simple laboratory method for the rapid identification of Candida albicans. Pathology 6, 231-233. Jiilich, W 1981. Higher taxa of Basidiomycetes. Bibliotheca Mycologica, Vol. 85. J. Cramer, Vaduz, 485pp. Jurzitza, G. 1964. Studien an der Symbiose der Anobiiden. II. Physiologische Studien am Symbionten von Lasioderma serricorne F. Arch. Mikrobiol. 49, 331-340. Jurzitza, G. 1970. Uber Isolierung, Kultur und Taxonomic einiger Anobiidensymbionten (Insecta, Coleoptera). Arch. Mikrobiol. 72, 203-222. Jurzitza, G. 1979. The fungi symbiotic with Anobiid beetles. In: L.R. Batra (ed.), Insect-Fungus Symbiosis: Nutrition, Mutualism, and Commensalism. Wiley, New York, pp. 65-75. Jurzitza, G., C Kiihlwein and N.J.W. Kreger-van Rij. 1960. Zur Systematik einiger Cerambycidensymbionten. Arch. Mikrobiol. 36, 229-243. Kado, CI. 1992. Lux and other reporter genes. In: M.A. Levin, R.J. Seidler and M. Rogul (Eds.), Microbial Ecology, Principles, Methods, and Applications. McGraw-Hill, New York, pp. 371-392. Kagan, B.L. 1983. Mode action of yeast killer toxin: channel formation in lipid bilayer membranes. Nature 302, 709-711. Kagiyama, S., T. Aiba, K. Kadowaki and K. Mori. 1988. New killer toxin of halophilic Hansenula anomala. Agric. Biol. Chem. 52, 1-7. Kaltenboeck, B., J.W Spatafora, X. Zhang, K.G. Kousalas, M. Blackwell and J. Storz. 1992. Efficient production of single-stranded DNA as long as 2kb for sequencing of PCR-amplified DNA. Biotechniques 12, 164-171. Kambayashi, T. 1923. Uber die Erreger der Piedrakrankheit in Japan. Japan. J. Dermatol. Urol. 23, 483-511. Kamienski, T. 1899. Notice preliminaire sur I'espece de Metschnikowia (Monospora Metschn.). Trav. Soc. Imp. Natural. St. Petersbourg 30, 363-364. Kamiyama, A., M. Niimi, M. Tokunaga and H. Nakayama. 1989. DNA homology between Candida albicans strains: evidence to justify the synonymous status of C stellatoidea. Mycopathologia 107, 3-7. Kamper, J., N. Gunge, K. Esser and F. Meinhardt. 1989. New recombinant linear DNA-elements derived from Kluyveromyces lactis killer plasmids. Nucl. Acids Res. 17, 1781. Kandel, J.S., and T.A. Stem. 1979. Killer phenomenon in pathogenic yeasts. Antimicrob. Agents Chemother. 15, 568-571. Kaneko, T, K. Ishii, H. Kawaharada, K. Kagotani, Y Shimada and

References K. Watanabe. 1977. Taxonomic studies of a hydrocarbon-assimilating Candida strain. Agric. Biol. Chem. 41, 2269-2275. Kaneko, Y., M. Kozaburo and I. Banno. 1989. Karyotyping of Saccharomyces exiguus by pulsed field gel electrophoresis. Inst. Ferment. Osaka Res. Commun. 14, 111-117. Kang, K.S., and I.W. Cottrell. 1979. Polysaccharides. In: H.J. Peppier and D. Perlman (Eds.), Microbial Technology, 2nd edn., Vol. 1. Academic Press, New York, pp. 417-481. Kao, C.J. 1956. The cytology of Xenogloea eriophori. Mycologia 48, 288-301. Kaplan, L., and A.L. Demain. 1970. Nutritional studies on riboflavin overproduction by Ashbya gossypii. In: D.G. Ahearn (Ed.), Recent Trends in Yeast Research, Spectrum Monograph Series. Georgia State University, Atlanta, GA, USA, pp. 137-159. Kapoor, K.K., K. Chaudhary and P Tauro. 1982. Citric acid. In: G. Reed (Ed.), Prescott & Dunn's Industrial Microbiology, 4th edn. Avi, Westport, CT, pp. 709-747. Karamboloff, N., and G. Krumbholz. 1931. Untersuchungen iiber osmophile Sprosspilze. IV Zygosaccharomyces gracilis sp. n. Arch. Mikrobiol. 3, 113-121. Karamysheva, Z.N., VN. Ksenzenko, L.P. Tichomirova and W.I. Golubev. 1991. Mycocin production in Cystofilobasidium bisporidii is associated with double-stranded RNAs. Abstr. 15th Int. Spec. Symp. on Yeasts (Riga), p. 61. Kato, K,, Y. Kurimura, N. Makiguchi and Y. Asai. 1974. Determination of strongly methanol assimilating yeasts. J. Gen. Appl. Microbiol. 20, 123-127. Kaufman, L., and S. Blumer. 1978. Cryptococcosis the awakening giant. In: Proc. IV Int. Conf on Mycoses, Pan Am. Health Org. Sci. Publ. No. 356, 176-182. Kawakami, N. 1958. Electron-microscopy of fiangi (V). The morphological study of the spore of non-pellicle group in the genus Debaryomyces and the classification of the genus Debaryomyces. Electron Microscopy 7, 235-237. Kawakami, N., and T. Nehira. 1958. Electron microscopy of fungi. IV The morphological study of the spore of pellicle group in the genus Debaryomyces. Electron Microscopy 7, 33-35. Kawakami, N., T. Nehira and K. Kodama. 1961. Electron microscopy of fungi. X. Spore forms of the genus Pichia. Mem. Fac. Eng. Hiroshima Univ 1, 407-^14. Kawano, T., H. Kojima, H. Ohosawa and K. Morinaga. 1976. Feed and method of aquianimals cultivation. U.S. Patent 3 939279. Kayser, E. 1892. Contribution a I'etude des levures de vin. Ann. Inst. Pasteur 6, 569-583. Keilin, D. 1920. On a new Saccharomycete Monosporella unicuspidata gen. n. nom., n. sp., parasitic in the body cavity of a dipterous larva (Dasyhelea obscura Winnertz). Parasitol. 12, 83-91. Kelly, R.B., N.R. Cozzrelli, M.P Deutscher, I.R. Lehman and A. Kornberg. 1970. Enzymatic synthesis of deoxyribonucleic acid. XXXII, Replication of duplex deoxyribonucleic acid by polymerase at a single strand break. J. Biol. Chem. 245, 3 9 ^ 5 . Kern, H., and S. Naef-Roth. 1975. Zur bildung von Auxinen und Cytokininen durch Taphrina-arten. Phytopathol. Z. 83, 193-222. Kessler, E. 1982. Physiological and biochemical contributions to the taxonomy of the genus Prototheca. III. Utilization of organic carbon and nitrogen compounds. Arch. Microbiol. 132, 103-106. Khan, S.R. 1976. Ultrastructure of the septal pore apparatus ofTremella. J. Gen. Microbiol. 97, 339-342. Khan, S.R., and J.W. Kimbrough. 1980. Septal ultrastructure in some genera of Tremellaceaea. Can. J. Bot. 58, 55-60. Khan, S.R., J.W. Kimbrough and K.J. Kwon-Chung. 1981a. Ultrastructure of Filobasidiella arachnophila. Can. J. Bot. 59, 893-897. Khan, S.R., J.W. Kimbrough and C.W Mims. 1981b. Septal ultrastructure and the taxonomy of Exobasidium. Can. J. Bot. 59, 2450-2457. Khouri, J. 1932. Sur une Monilia isolee des crachats d'un malade atteint de blastomycose pulmonaire: Monilia aegyptiaca. C.R. Mem. Soc. Biol. 1 1 1 , 4 1 9 ^ 2 0 . Kilian, S.G., A. van Deemter, J.L.E Kock and J.C. du Preez. 1991.

977

Occurrence and taxonomic aspects of proton movements coupled to sugar transport in the yeast genus Kluyueromyces. Antonie van Leeuwenhoek 59, 199-206. Kilmartin, J.V 1981. Purification of yeast tubulin by self-assembly in vitro. Biochemistry 20, 3629-3633. Kilmartin, J.V, and A.E.M. Adams. 1984. Structural rearrangements of tubulin and actin during the cell cycle of the yeast Saccharomyces. J. Cell Biol. 98, 922-933. King, D.S., and S.-C. Jong. 1975. Sarcinosporon: a new genus to accommodate Trichosporon inkin and Prototheca filamenta. Mycotaxon 3, 89-94. King, D.S., and S.-C. Jong. 1976a. Aciculoconidium: a new hyphomycetous genus to accommodate Trichosporon aculeatum. Mycotaxon 3, 4 0 1 ^ 0 8 . King, D.S., and S.-C. Jong. 1976b. Induction of arthroconidia in Trichosporon. Mycopathol. Mycol. Appl. 59, 61-63. King, D.S., and S.-C. Jong. 1977. A contribution to the genus Trichosporon. Mycotaxon 6, 3 9 1 ^ 1 7 . King, S.M., and J.S. Hyams. 1982, The mitotic spindle of Saccharomyces cerevisiae: assembly, structure and fiinction. Micron 13, 93-117. Kirsop, B.E., and C.P. Kurtzman (Eds.). 1988. Living Resources for Biotechnology. Yeasts. Cambridge University Press, Cambridge, 234pp. Kitaite, E., and D. Citavicus. 1988. Virus-like particles from Sporidiobolus salmonicolor Yeast 4, SI85. Klecan, A.L., S. Hippe and S.C. Somerville. 1990. Reduced growth of Erysiphe graminis f. sp. hordei induced by Tilletiopsis pallescens. Phytopathology 80, 325-331. Kleven, N.L., and D.J. McLaughlin. 1989. A light and electron microscopic study of the developmental cycle in the basidiomycete Pachnocybe ferruginea. Can. J. Bot. 67, 1336-1348. Kleyn, J.G. 1954. A study of some environmental factors controlling sporulation of yeast using a new sporulation medium. Wallerstein Lab. Commun. 17, 91-104. Klis, EM. 1994. Review: cell wall assembly in yeast. Yeast 10, 851-869. Klocker, A. 1902. Eine neue Saccharomyces art {Saccharomyces saturnus mihi) mit eigentiimlichen Sporen. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 8, 129-130. Klocker, A. 1909a. Deux nouveaux genres de la famille des Saccharomycetes. C.R. Trav. Lab. Carlsberg 7, 273-278. Klocker, A. 1909b. Endomyces javanensis nov. sp. C.R. Trav. Lab. Carlsberg 7, 267-272. Klocker, A. 1912a. Untersuchungen iiber einige neue Pichia-Artcn. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 35, 369-375. Klocker, A. 1912b. Beschreibungen von 17 Saccharomyces apiculatus Formen. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 35, 375-388. Klocker, A. 1924. Die Garungsorganismen in der Theorie und Praxis der Alkoholgarungsgewerbe, 3te Aufl. Urban & Schwarzenberg, BerlinWien. Kluyver, A.J. 1914. Biochemische suikerbepalingen. Thesis. Technische Hoogeschool Delft. Kluyver, A.J., and C.B. van Niel. 1924. Uber Spiegelbilder erzeugende Hefenarten und die neue Hefengattung Sporobolomyces. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 63, 1-20. Kluyver, A.J., and C.B. van Niel. 1927. Sporobolomyces: ein Basidiomyzet? Ann. Mycol. 25, 389-394. Kobayashi, T. 1953. Studies on the yeasts and yeast-like fungi which grow well on wood hydrolysate medium. Rep. Wood Saccharification Discussion Committee 2, 1-93. Kobayasi, Y 1937. On the genus Holtermannia of Tremellaceae. Sci. Rep. Tokyo Bunr. Daig. B 3, 75-81. Kobayasi, Y 1939. The genus Tremella and its allies from Japan (Fungorum Ordinis Tremellales, Studia Monographica II). Sci. Rep. Tokyo Bunr. Daig. 4, 1-26. Kobayasi, Y , and K. Tubaki. 1965. Studies on cultural characters and asexual reproduction of Heterobasidiomycetes. Trans. Mycol. Soc. Japan 6, 29-36.

978

References

Kock, J.L.F., and J.P. van der Walt. 1986. Fatty acid composition of Schizosaccharomyces Lindner. Syst. Appl. Microbiol. 8, 163-165. Kock, J.L.F., D.J. Coetzee and G.H.J. Pretorius. 1988. The phylogenetic development of species representing the genus Kluyueromyces. Syst. Appl. Microbiol. 10, 293-296. Kock, J.L.F., D.J. Coetzee, M.S. van Dijk, M. Truscott, A. Botha and P.H. Ockert. 1992. Evidence for, and taxonomic value of, an arachidonic acid cascade in the Lipomycetaceae. Antonie van Leeuwenhoek 62, 251-259. Kock, J.L.F., J.P. van der Walt and Y. Yamada. 1995. Smithiozyma gen. nov (Lipomycetaceae). S. Afr. J. Bot. 61, 232-233. Kockova-Kratochvilova, A. 1964. Prispevok K ekologii kvasinkovitych mikroorganismov. Kvasinkovite mikro organismy z kvetov rastlin. Ceska. Mykol. 18, 29-35. Kockova-Kratochvilova, A., and M. Havelkova. 1974. Prototheca hydrocarbonea n. sp. Lebenszyklus, Metabolismus, und Feinstruktur. Z. allgem. Mikrobiol. 14, 123-134. Kockova-Kratochvilova, A., and D. Ondrusova. 1971. TorulopsisartQn aus den Oberflachen hoherer Pilze. Torulopsis kruisii n. sp. und Torulopsis schatavii n. sp. Biologia (Bratislava) 26, 4 7 7 ^ 8 5 . Kockova-Kratochvilova, A., and E. Slavikova. 1988. Candida mucifera n. sp. J. Basic Microbiol. 28, 613-618. Kockova-Kratochvilova, A., and Y. Svobodova-Polakova. 1959. Nadsonia slouaca n. sp. isolated in Slovakia. J. Gen. Microbiol. 20, 24-26. Kockova-Kratochvilova, A., F. Smarda and M. Pokoma. 1965. Prispevok k ekologii kvasinkovitych mikroorganizmov. Kvasinkovite mikroorganizmy na povrchu vyssich hub z Ceskomoravskej a Bmenskej vrchoviny na Morave. Ceska Mykol. 19, 114-120. In Russian. Kockova-Kratochvilova, A., E. Slavikova and J. Beranek. 1977a. Torulopsis armenti n. sp. Z. Allg. Mikrobiol. 17, 4 2 9 ^ 3 1 . Kockova-Kratochvilova, A., E. Slavikova, J. Zemek and L. Kuniak. 1977b. The heterogeneity of the genus Trichosporon. Proc. 5th Intern. Spec. Symposium Yeasts, p. 9. Kockova-Kratochvilova, A., E. Slavikova and Y Jensen. 1978. Numerical taxonomy of the genus Debaryomyces Lodder et Kreger-van Rij. J. Gen. Microbiol. 104, 257-268. Kockova-Kratochvilova, A., M. Simordova and S. Stembersky. 1987. Moniliella suaueolens var. nigra. Mykosen 30, 544-547. Kocourek, J., and C.E. Ballou. 1969. Method for fingerprinting yeast cell wall mannans. J. Bacteriol. 100, 1175-1181. Kodama, K. 1974. Ascosporogenous yeasts isolated from tree exudates in Japan. Ann. Microbiol. Milano 24, 215-231. Kodama, K. 1975. New species of Pichia isolated from tree exudates in Japan. J. Ferment. Technol. 53, 626-630. Kodama, K., and T. Kyono. 1974a. Ascosporogenous yeasts isolated fi*om tree exudates in Japan. J. Ferment. Technol. 52, 1-9. Kodama, K., and T. Kyono. 1974b. Ascosporogenous yeasts isolated from tree exudates in Japan (continued). J. Ferment. Technol. 52, 605-613. Kodama, K., T. Kyono and S. Kodama. 1955. A study of film-forming yeasts (II). Genus Pichia (2). J. Ferment. Technol. 33, 317-324. Kodama, K., T. Kyono and S. Kodama. 1957. Studies on the film yeasts (XIII). Hansenula (7). J. Ferment. Technol. 35, 328-331. In Japanese. Kodama, K., T Kyono and S. Kodama. 1962. Taxonomic study on the genus Pichia Hansen (2). J. Gen. Appl. Microbiol. 8, 52-55. Kodama, K., T. Kyono, K. lida and N. Onoyama. 1964a. Studies on wild yeasts which thrive in 'sake-moto'. J. Ferment. Technol. 42, 739-745. Kodama, K., T Kyono, H. Naganishi and Y Takahara. 1964b. Debaryomyces franciscae (Capriotti) nov. comb. J. Ferment. Technol. 42, 1-6. Kodama, K., T. Kyono, H. Naganishi and Y Takahara. 1964c. Taxonomic studies on the genus Debaryomyces. (IV) Debaryomyces nilssoni (Capriotti) nov. comb. J. Ferment. Technol. 42, 655-660. Kolfschoten, G.A., and D. Yarrow. 1970. Brettanomyces naardenensis, a new yeast from soft drinks. Antonie van Leeuwenhoek 36, 4 5 8 ^ 6 0 . Koltin, Y 1988. The killer system of Ustilago maydis: secreted polypeptides encoded by viruses. In: Y Koltin and M.J. Leibowitz

(Eds.), Viruses of Fungi and Simple Eukaryotes. Marcel Dekker, New York, pp. 209-242. Komagata, K., and T. Nakase. 1965. New species of the genus Candida isolated fi-om fi-ozen foods. J. Gen. Appl. Microbiol. 11, 255-267. Komagata, K., T. Nakase and N. Katsuya. 1964. Assimilation of hydrocarbons by yeast. II. Determination of hydrocarbon-assimilating yeasts. J. Gen. Appl. Microbiol. 10, 323-331. Komiya, H., M. Miyazaki and S. Takemura. 1981. The nucleotide sequence of 5S ribosomal RNA from Schizosaccharomyces pombe. J. Biochem. 89, 1663-1666. Konisky, J. 1982. Colicins and other bacteriocins with established modes of action. Annu. Rev. Microbiol. 36, 125-144. Konokotina, A.G. 1913. Uber die neuen Hefepilze mit heterogamer Kopulation - Nadsonia (Guilliermondia) elongata und Debaryomyces tyrocola. Bull. Jard. Imp. Bot. St. Petersbourg 13, 32-44. In Russian. (Rev in: Zentralbl. Bakteriol. Parasitenkd., Abt. II, 40, 177.) Koopmans, A. 1977. A cytological study of Nematospora coryli Pegl. Genetica47, 187-195. Korf, R.P. 1957. Dipodascus albidus forma minor. Sydowia Beih. 1, 285-288. Kossikov, K.V, and A.A. Medvedeva. 1977. Isolation of hybrids of Schizosaccharomyces pombe and Octosporomyces japonicus. Mikrobiologiya 46, 61-65. Kostka, G. 1927. Uber Nadsonia richteri nov. spec, eine interessante Schleimflusshefe aus Mahren. Verh. Naturforsch. Ver. Brunn, 59, 1422. (Rev in: Wochenschr. Brau. 44, 128.) Kotov, V, and S.V Reshetnikov. 1990. A stochastic model for early mycelial growth. Mycol. Res. 94, 577-586. Kraepelin, G., and U. Schulze. 1982. Sterigmatosporidium gen. n., a new heterothallic basidiomycetous yeast, the perfect state of a new species of Sterigmatomyces Fell. Antonie van Leeuwenhoek 48, 4 7 1 ^ 8 3 . Kramer, C.L. 1958. A new genus in the Protomycetaceae. Mycologia 50, 916-926. Kramer, C.L. 1960. Morphological development and nuclear behavior in the genus Taphrina. Mycologia 52, 295-320. Kramer, C.L. 1987. The Taphrinales. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 151-166 (Stud. Mycol. 30, 151-166). Krasil'nikov, N.A. 1927. Selenotila intestinalis nov. sp. - Novyi gribok iz kishechnika babochki Brenthis pales Schiflf. Mikrobiol. Zh. 4, 134137. In Russian. Krasil'nikov, N.A. 1933. Rassenbildung bei Sporobolomyces philippoui n. sp. Izv Akad. Nauk, VII Ser., Otd. Mat. Estest. Nauk [Bull. Acad. Sci. URSS, Ser. VII, Classe Sci. Math. Natur.] No. 10, 1469-1491. In Russian. Krasil'nikov, N.A. 1954a. Semejstvo Saccharomycetaceae. In: L.I. Kursanova (Ed.), Opredelitel' Nizshih Rastenij, Vol. 3, Griby. Gosudarstvennoe Iztatel'stvo "Sovetskaya Nauka", Moscow, pp. 108-129. In Russian. Krasil'nikov, N.A. 1954b. Semejstvo Chromotorulaceae. In: L.I. Kursanova (Ed.), Opredelitel' Nizshih Rastenij, Vol. 3. Griby. Gosudarstvennoe Iztatel'stvo "Sovetskaya Nauka", Moscow, pp. 129-136. In Russian. Krasil'mkov, N.A. 1954c. Semejstvo Torulopsidaceae. In: L.I. Kursanova (Ed.), Opredelitel' Nizshih Rastenij, Vol. 3. Griby. Gosudarstvennoe Iztatel'stvo "Sovetskaya Nauka", Moscow, pp. 136-148. In Russian. Krasil'nikov, N.A., LP. Bab'eva and K. Meavahd. 1967. A new genus of soil yeast Zygolipomyces nov. gen. Microbiologiya 36, 923-931. In Russian. Kreger-van Rij, N.J.W 1958. The relationship between Saccharomyces tellustris and Candida bouina. Antonie van Leeuwenhoek 24, 137144. Kreger-van Rij, N.J.W. 1961. Taxonomy of Cryptococcus neoformans and its variety uniguttulatus. Antonie van Leeuwenhoek 17, 59-64. Kreger-van Rij, N.J.W. 1964a. Endomycopsis uini and Pichia etchellsii, spp. n. Antonie van Leeuwenhoek 30, 4 2 8 ^ 3 2 . Kreger-van Rij, N.J.W. 1964b. A taxonomic study of the yeast genera

References Endomycopsis, Pichia and Debaryomyces, Thesis. University of Leiden. Kreger-van Rij, N.J.W. 1965. Candida ciferrii, a new yeast species. Mycopathol. Mycol. Appl. 26, 49-52. Kreger-van Rij, N.J.W. 1966a. Kluyueromyces osmophilus, a new yeast species. Mycopathol. Mycol. Appl. 29, 137-141. Kreger-van Rij, N.J.W. 1966b. Taxonomy of the genus Pichia. In: A. Kockova-Kratochvilova (Ed.), Proc. 2nd Int. Symp. on Yeasts, Bratislava, Czechoslovakia. Slovak Academy of Sciences, Bratislava, pp. 51-58. Kreger-van Rij, N.J.W. 1969a. Taxonomy and systematics of yeasts. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts. Vol. 1, Academic Press, New York, pp. 5-78. Kreger-van Rij, N.J.W 1969b. A new feature of the ascospores of Saccharomycodes ludwigii Hansen. Can. J. Microbiol. 15, 823-825. Kreger-van Rij, N.J.W. 1969c. Some features of yeast ascospores observed under the electron microscope. In: A. Kockova-Kratochvilova (Ed.), Proc. 2nd Symp. Yeasts, Bratislava, 1966, pp. 169-176. Kreger-van Rij, N.J.W. 1970a. Debaryomyces Lodder et Kreger-van Rij nom. conserv. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 129-156. Kreger-van Rij, N.J.W. 1970b. Endomycopsis Dekker. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 166-208. Kreger-van Rij, N.J.W. 1970c. Pichia Hansen. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 455-554. Kreger-van Rij, N.J.W. 1974. The species Dipodascopsis uninucleata (Biggs) Batra & Millner. Persoonia 8, 105-109. Kreger-van Rij, N.J.W. 1977a. Electron microscopy of sporulation in Schwanniomyces alluvius. Antonie van Leeuwenhoek 43, 55-64. Kreger-van Rij, N.J.W. 1977b. Ultrastructure of Hanseniaspora ascospores. Antonie van Leeuwenhoek 43, 225-232. Kreger-van Rij, N.J.W 1978. Ultrastructure of the ascospores of the new yeast genus Sporopachydermia Rodrigues de Miranda. Antonie van Leeuwenhoek 44, 451-456. Kreger-van Rij, N.J.W. 1979. A comparative ultrastructural study of the ascospores of some Saccharomyces and Kluyueromyces species. Arch. Microbiol. 121, 53-59. Kreger-van Rij, N.J.W 1984a. Delimitation of the yeasts. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 1-16. Kreger-van Rij, N.J.W 1984b. Ambrosiozyma van der Walt. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 106-113. Kreger-van Rij, N.J.W. 1984c. Arthroascus von Arx. In: N.J.W. Kregervan Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 114-116. Kreger-van Rij, N.J.W. 1984d. Debaryomyces Lodder et Kreger-van Rij nom. cons. In: N.J.W Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 130-145. Kreger-van Rij, N.J.W. 1984e. Guilliermondella Nadson et Krassilnikov. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 151-153. Kreger-van Rij, N.J.W. 1984f Saccharomycopsis Schionning. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 3 9 9 ^ 1 3 . Kreger-van Rij, N.J.W, and D.G. Ahearn. 1968. Shape and structure of the ascospores of Hanseniaspora uuarum. Mycologia 60, 604-612. Kreger-van Rij, N.J.W, and IP. van der Walt. 1963. Ascospores oiEndomycopsis selenospora (Nadson et Krassilnikov) Dekker. Nature 199, 1012-1013. Kreger-van Rij, N.J.W, and M. Veenhuis. 1971a. A comparative study of the cell wall structure of basidiomycetous and related yeasts. J. Gen. Microbiol. 68, 87-95. Kreger-van Rij, N.J.W, and M. Veenhuis. 1971b. Septal pores in Trichosporon cutaneum. Sabouraudia 9, 36-38.

979

Kreger-van Rij, N.J.W, and M. Veenhuis. 1973. Electron microscopy of septa in ascomycetous yeasts. Antonie van Leeuwenhoek 39, 481-490. Kreger-van Rij, N.J.W, and M. Veenhuis. 1974. Spores and septa in the genus Dipodascus. Can. J. Bot. 52, 1335-1338. Kreger-van Rij, N.J.W, and M. Veenhuis. 1975a. Electron microscopy of ascus formation in the yeast Debaryomyces hansenii. J. Gen. Microbiol. 89, 256-264. Kreger-van Rij, N.J.W, and M. Veenhuis. 1975b. Conjugation in the yeast Saccharomycopsis capsularis Schionning. Arch. Microbiol. 104, 263-269. Kreger-van Rij, N.J.W, and M. Veenhuis. 1976a. Conjugation in the yeast Guilliermondella selenospora Nadson et Krassilnikov. Can. J. Microbiol. 22, 960-966. Kreger-van Rij, N.J.W, and M. Veenhuis. 1976b. Ultrastructure of the ascospores of some species of the Torulaspora group. Antonie van Leeuwenhoek 42, 4 4 5 ^ 5 5 . Kreisel, H., and E Schauer. 1989. Dimorphismus im System der Pilze Grauzone der Taxonomic? Zentralbl. Mikrobiol. 144, 219-229. Kroemer, K., and K Heinrich. 1922. Uber eine in uberschwefelten Mosten auftretende Hefe der Gattung Saccharomycodes. Festschr. Staatl. Lehr. Forschungsanstalt Wein-, Obst- und Gartenbau. Geisenheim, pp. 258-294. Kroemer, K., and G. Krumbholz. 1931. Untersuchungen iiber osmophile Sprosspilze. I. Beitrage zur Kenntnis der Garungsvorgange und der Garungserreger der Trockenbeerenauslesen. Arch. Mikrobiol. 2, 352410. Kriiger, W 1894a. Kurze Charakteristik einiger niederer Organismen im Saftflusse der Laubbaume. Hedwigia 33, 241-266. Kriiger, W 1894b. Beitrage zur Kenntniss der Organismen des Saftflusses (sog. Schleimflusses) der Laubbaume. Parts I and II. Zopf's Beitrage Physiologic zat Morphologic niedaren der Organismen (Leipzig) 4, 69-116. Krumbholz, G. 1931. Untersuchungen iiber osmophile Sprosspilze. II. Beitrage zur Kenntnis der Gattung Zygosaccharomyces. Arch. Mikrobiol. 2 , 4 1 1 ^ 9 2 . Krumbholz, G. 1932. Uber eine pastoriane Hefe von Weinbeeren, Saccharomyces elongatus sp. n. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 86, 206-214. Krumbholz, G. 1933. 1st die Beibehaltung einer Gattung Torulaspora berechtigt? Arch. Mikrobiol. 4, 167-169. Krumbholz, G., and W Tauschanoff. 1933. Mycotorula intermedia n. sp., ein Beitrag zur Kenntnis der Garungserreger im Wein. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 88, 366-373. Krzemecki, A. 1913. Uber eine Aroma bildende Oidium-Art, Oidium suauolens. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 38, 577-584. Kudryavtsev, VI. 1954. Yeast Systematics. U.S.S.R. Academy of Sciences, Moscow. In Russian. Kudryavtsev, VI. 1960. Die Systematik der Hefen. Akademie Verlag, Berlin. Kufferath, H. 1920. Peut-on obtenir du mout de biere alcalin? Ann. Bull. Soc. Roy Sci. Med. Nat. Bruxelles 74, 1 6 ^ 6 . Kufferath, H. 1925. Etudes sur les levures du Iambic. Isolement, caracteres de culture et biologic. Ann. Soc. Zymol. 1, 7-17. Kufferath, H., and M.H. van Laer. 1921. Etudes sur les levures de Iambic. Leur action chimique sur les milieux de culture. Bull. Soc. Chim. Beige 30, 270-276. Kiihlwein, H., and G. Jurzitza. 1961. Studien an der Symbiose der Anobiiden. I. Die Kultur des Symbionten von Sitodrepa panicea L. Arch. Mikrobiol. 40, 247-260. Kumamoto, T, M. Yamamoto, Y. Seriu, K. Kouno, R. Okamoto, T. Ishikura and A. Takamatsu. 1986. Four new species of methanolassimilating yeasts: Candida methanolophaga, Candida oualis, Candida ooitensis and Pichia methylouora. Trans. Mycol. Soc. Japan 27, 387-397. Kumbhojkar, M.S. 1972. Schizosaccharomyces slooffiae Kumbhojkar, a new species of osmophilic yeasts from India. Curr. Sci. 41, 151-152. Kumbhojkar, M.S. 1981. New taxa of Indian osmophilic yeasts. Biovigyanam 7, 97-105.

980

References

Kundalkar, B.D., and M.S. Patil. 1986. Study of Sirobasidiaceous fungi from India. Indian Phytopathol. 39, 356-360. Kunkee, R.E., and R.W. Goswell. 1977. Table wines. In: A.H. Rose (Ed.), Alcoholic Beverages. Academic Press, London, pp. 315-386. Kuraishi, H. 1958. Pichia megalospora nov. spec, a new yeast from decomposing mushrooms. Sci. Rep. Tohoku Univ., IV Ser. Biol. 24, 109-111. Kuraishi, H., K. Katayama-Fujimura, J. Sugiyama and T. Yokoyama. 1985. Ubiquinone systems in ftingi 1. Distribution of ubiquinones in the major families of ascomycetes, basidiomycetes and deuteromycetes, and their taxonomic implications. Trans. Mycol. Soc. Japan 26, 383-395. Kursanov, L.I. 1954. Opredelitel' nizshikh Rastenii, Tom 3, Griby. Sovetskaya Nauka. Kurtzman, C.P. 1973. Formation of hyphae and chlamydospores by Cryptococcus laurentii. Mycologia 65, 388-395. Kurtzman, C.P. 1977. Cephaloascus albidus, a new heterothallic yeastlike fungus. Mycologia 69, 547-555. Kurtzman, C.P. 1984a. Synonymy of the yeast genera Hansenula and Pichia demonstrated through comparisons of deoxyribonucleic acid relatedness. Antonie van Leeuwenhoek 50, 209-217. Kurtzman, C.P. 1984b. Resolution of varietal relationships within the species Hansenula anomala, Hansenula himundalis, and Pichia nakazawae through comparisons of DNA relatedness. Mycotaxon 19, 271-279. Kurtzman, C.P 1984c. Hansenula H. et P Sydow. In: N.J.W. Kregervan Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 165-213. Kurtzman, C.P 1984d. Pichia Hansen. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 295-378. Kurtzman, C.P 1987a. Two new species of Pichia from arboreal habitats. Mycologia 79, 4 1 0 ^ 1 7 . Kurtzman, C.P. 1987b. Prediction of biological relatedness among yeasts from comparisons of nuclear DNA complementarity. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 4 5 9 ^ 6 8 (Stud. Mycol. 30, 459^68). Kurtzman, C.P. 1990a. DNA relatedness among species of Sterigmatomyces and Fellomyces. Int. J. Syst. Bacteriol. 40, 56-59. Kurtzman, C.P. 1990b. Candida shehatae - genetic diversity and phylogenetic relationships with other xylose-fermenting yeasts. Antonie van Leeuwenhoek 57, 215-222. Kurtzman, C.P. 1990c. DNA relatedness among species of the genus Zygosaccharomyces. Yeast 6, 213-219. Kurtzman, C.P. 1991a. DNA relatedness among satum-spored yeasts assigned to the genera Williopsis and Pichia. Antonie van Leeuwenhoek 60, 13-19. Kurtzman, C.P. 1991b. Saturnospora ahearnii, a new salt marsh yeast from Louisiana. Antonie van Leeuwenhoek 60, 31-34. Kurtzman, C.P. 1992a. rRNA sequence comparisons for assessing phylogenetic relationships among yeasts. Int. J. Syst. Bacteriol. 42, 1-6. Kurtzman, C.P. 1992b. DNA relatedness among phenotypically similar species of Pichia. Mycologia 84, 72-76. Kurtzman, C.P. 1993a. Systematics of the ascomycetous yeasts assessed from ribosomal RNA sequence divergence. Antonie van Leeuwenhoek 63, 165-174. Kurtzman, C.P. 1993b. DNA-DNA hybridization approaches to species identification in small genome organisms. In: E.A. Zimmer, T.J. White, R.L. Cann and A.C. Wilson (Eds.), Methods in Enzymology, Vol. 224. Academic Press, New York, pp. 335-348. Kurtzman, C.P. 1993c. The systematics of ascomycetous yeasts defined from ribosomal RNA sequence divergence: theoretical and practical aspects. In: D.R. Reynolds and J.W Taylor (Eds.), The Fungal Holomorph: Mitotic, Meiotic and Pleomorphic Speciation in Fungal Systematics. CAB International, Wallingford, UK, pp. 271-279.

Kurtzman, C.P. 1994. Molecular taxonomy of the yeasts. Yeast 10, 17271740. Kurtzman, C.P. 1995. Relationships among the genera Ashbya, Eremothecium, Holleya and Nematospora determined from rDNA sequence divergence. J. Ind. Microbiol. 14, 523-530. Kurtzman, C.P. 1996. Transfer of Hansenula ofunaensis to the genus Pichia. Mycotaxon 59, 85-88. Kurtzman, C.P, and D.G. Ahearn. 1976. Spomlation in Pichia spartinae. Mycologia 68, 682-685. Kurtzman, C.P, and J.W. Fell. 1991. Molecular relatedness between the basidiomycetous yeasts Sporidiobolus ruinenii and Spowbolomyces coprophilus. Mycologia 83, 107-110. Kurtzman, C.P, and N.J.W. Kreger-van Rij. 1976. Ultrastructure of ascospores from Debaryomyces melissophilus, a new taxonomic combination. Mycologia 68, 422-425. Kurtzman, C.P, and Z. Liu. 1990. Evolutionary affinities of species assigned to Lipomyces and Myxozyma estimated from ribosomal RNA sequence divergence. Curr. Microbiol. 21, 387-393. Kurtzman, C.P, and H.J. Phafif. 1987. Molecular taxonomy. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. I, 2nd edn. Academic Press, London, pp. 63-94. Kurtzman, C.P, and C.J. Robnett. 1991. Phylogenetic relationships among species of Saccharomyces, Schizosaccharomyces, Debaryomyces and Schwanniomyces determined from partial ribosomal RNA sequences. Yeast 7, 61-72. Kurtzman, C.P, and C.J. Robnett. 1994a. Orders and families of ascosporogenous yeasts and yeast-like taxa compared from ribosomal RNA sequence similarities. In: D.L. Hawksworth (Ed.), Ascomycete Systematics: Problems and Perspectives in the Nineties. Plenum Press, New York, pp. 249-258. Kurtzman, C.P, and C.J. Robnett. 1994b. Synonymy of the yeast genera Wingea and Debaryomyces. Antonie van Leeuwenhoek 66, 337-342. Kurtzman, C.P, and C.J. Robnett. 1995. Molecular relationships among hyphal ascomycetous yeasts and yeastlike taxa. Can. J. Bot. 73, S824S830. Kurtzman, C.P, and C.J. Robnett. 1997. Identification of clinically important ascomycetous yeasts based on nucleotide divergence in the 5' end of the large-subunit (26S) ribosomal DNA gene. J. Clin. Microbiol. 35, 1216-1223. Kurtzman, C.P, and M.J. Smiley. 1974. A taxonomic re-evaluation of the round-spored species of Pichia. In: H. Klaushofer and U.B. Sleytr (Eds.), Proc. IV Int. Symp. on Yeasts, Vienna, Austria. I. Hochschulerschaft an der Hochschule fiir Bodenkultur, Vienna, pp. 231-232. Kurtzman, C.P, and M.J. Smiley. 1976. Heterothallism in Pichia kudriavzevii and Pichia terricola. Antonie van Leeuwenhoek 42, 355363. Kurtzman, C.P, and M.J. Smiley. 1979. Taxonomy of Pichia carsonii and its synonyms P. vini and P. vini var. melibiosi: comparison by DNA reassociation. Mycologia 71, 658-662. Kurtzman, C.P, and L.J. Wickerham. 1972. Pichia besseyi sp. n. Antonie van Leeuwenhoek 38, 49-52. Kurtzman, C.P, and L.J. Wickerham. 1973. Saccharomycopsis crataegensis, a new heterothallic yeast. Antonie van Leeuwenhoek 39, 81-87. Kurtzman, C.P, R. Rogers and C.W Hesseltine. 1971. Microbiological spoilage of mayonnaise and salad dressing. Appl. Microbiol. 21, 870874. Kurtzman, C.P, M.J. Smiley and F.L. Baker. 1972. Scanning electron microscopy of ascospores of Schwanniomyces. J. Bacteriol. 112, 13801382. Kurtzman, C.P, J.C. Gentles, E.G.V Evans, M.E. Slodki and R.M. Ward. 1973a. Growth of Hansenula holstii on cadavers. Appl. Microbiol. 25, 184-186. Kurtzman, C.P, R.F. Vesonder and M.J. Smiley. 1973b. Formation of extracellular C14-C18 2-D-hydroxy fatty acids by species of Saccharomycopsis. Appl. Microbiol. 26, 650-652. Kurtzman, C.P, R.F. Vesonder and M.J. Smiley. 1974. Formation of

References extracellular 3-D-hydroxypalmitic acid by Saccharomycopsis malanga. comb. nov. Mycologia 66, 580-587. Kurtzman, C.P., M.J. Smiley and F.L. Baker. 1975. Scanning electron microscopy of ascospores of Debaryomyces and Saccharomyces. Mycopathol. Mycol. Appl. 55, 29-34. Kurtzman, C.P., C.J. Johnson and M.J. Smiley. 1979. Determination of conspecificity of Candida utilis and Hansenula jadinii through DNA reassociation. Mycologia 71, 844-847. Kurtzman, C.P., M.J. Smiley, C.J. Johnson, L.J. Wickerham and G.B. Fuson. 1980a. Two new and closely related heterothallic species, Pichia amylophila and Pichia mississippiensis: characterization by hybridization and deoxyribonucleic acid reassociation. Int. J. Syst. Bacteriol. 30, 208-216. Kurtzman, C.P., M.J. Smiley and C.J. Johnson. 1980b. Emendation of the genus Issatchenkia Kudriavzev and comparison of species by deoxyribonucleic acid reassociation, mating reaction, and ascospore ultrastructure. Int. J. Syst. Bacteriol. 30, 503-513. Kurtzman, C.P., R.J. Bothast and J.E. VanCauwenberge. 1982. Conversion of D-xylose to ethanol by the yeast Pachysolen tannophilus. U.S. Patent 4359534. Kurtzman, C.P, M.J. Smiley, C.J. Robnett and D.T. Wicklow. 1986. DNA relatedness among wild and domesticated species in the Aspergillus flauus group. Mycologia 78, 955-959. Kuttin, E.S., and J. Miiller. 1981. Trichosporon beemeri sp. nov. Antonie van Leeuwenhoek 47, 255-265. Kiitzing, F.T. 1833. Algarum aquae dulcis Germanicarum, Decas III. Kvalseth, T.O. 1991. Note on biological diversity, evenness, and homogeneity measures. Oikos 62, 123-127. Kvasnikov, E.I., S.S. Nagornaya and J.F. Shchelokova. 1975. Distribution of the yeast Rhodosporidium diobovatum in soil and plants. Microbiologiya 44, 753-756. In Russian; English translation in: Microbiology 44, 679-681. Kvasnikov, E.I., S.S. Nagornaya and I.F. Shchelokova. 1979a. Schwanniomyces ukrainicus nov. sp. Mikrobiol. Zh. (Kiev) 41, 3-5. Kvasnikov, E.I., S.S. Nagornaya and I.F. Shchelokova. 1979b. Hansenula ukrainica nov. sp. Mikrobiol. Zh. 41, 107-109. Kwon-Chung, K.J. 1975. A new genus, Filobasidiella, the perfect state of Cryptococcus neoformans. Mycologia 67, 1197-1200. Kwon-Chung, K.J. 1976a. A new species of Filobasidiella, the sexual state of Cryptococcus neoformans B and C serotypes. Mycologia 68, 942-946. Kwon-Chung, K.J. 1976b. Morphogenesis of Filobasidiella neoformans, the sexual state of Cryptococcus neoformans. Mycologia 68, 821-833. Kwon-Chung, K.J. 1977a. Heterothallism vs. self-fertile isolates of Filobasidiella neoformans (Cryptococcus neoformans). Proc. 4th Int. Conf on the Mycoses. PAHO, Scientific Publication No. 356, pp. 204213. Kwon-Chung, K.J. 1977b. Perfect state of Cryptococcus uniguttulatus. Int. J. Syst. Bacteriol. 27, 293-299. Kwon-Chung, K.J. 1980. Nuclear genotypes of spore chains in Filobasidiella neoformans (Cryptococcus neoformans). Mycologia 72, 418-422. Kwon-Chung, K.J. 1987. Filobasidiaceae - a taxonomic survey. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 7 5 85 (Stud. Mycol. 30, 75-85). Kwon-Chung, K.J., and J.E. Bennett. 1978. Distribution of a and a mating types of Cryptococcus neoformans among natural and clinical isolates. Am. J. Epidemiol. 108, 337-340. Kwon-Chung, K.J., and J.E. Bennett. 1984. Epidemiologic differences between the two varieties of Cryptococcus neoformans. Am. J. Epidemiol. 120, 123-130. Kwon-Chung, K.J., and J.E. Bennett. 1992. Medical Mycology. Lea and Febiger, Philadelphia, PA, 866pp. Kwon-Chung, K.J., and Y.C. Chang. 1994. The location and sequence of 5S rRNA gene in Filobasidiella neoformans. Int. J. Syst. Bacteriol. 44, 209-215. Kwon-Chung, K.J., and J.W. Fell. 1984. Filobasidiella Kwon-Chung. In:

981

N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 472-^82. Kwon-Chung, K.J., and T.J. Popkin. 1976. Ultrastructure of the septal complex in Filobasidiella neoformans (Cryptococcus neoformans). J. Bacteriol. 126, 524-528. Kwon-Chung, K.J., and J.C. Rhodes. 1986. Encapsulation and melanin formation as indicators of virulence in Cryptococcus neoformans. Infect. Immun. 51, 218-223. Kwon-Chung, K.J., J.E. Bennett and T.S. Theodore. 1978. Cryptococcus bacillisporus sp. nov: serotype B-C of Cryptococcus neoformans. Int. J. Syst. Bacteriol. 28, 616-620. Kwon-Chung, K.J., J.E. Bennett and J.C. Rhodes. 1982a. Taxonomic studies on Filobasidiella species and their anamorphs. Antonie van Leeuwenhoek 48, 25-38. Kwon-Chung, K.J., I. Polacheck and J.E. Bennett. 1982b. An improved diagnostic medium for separation of Cryptococcus neoformans var. neoformans (serotypes A and D) and Cryptococcus neoformans var. gattii (serotypes B and C). J. Clin. Microbiol. 15, 535-537. Kwon-Chung, K.J., B.L. Wickes, J.L. Booth, H.S. Vishniac and J.E. Bennett. 1987. Urease inhibition by ethylenediaminetetraacetate in two varieties of Cryptococcus neoformans. Infect. Immun. 55, 17511754. Kwon-Chung, K.J., B.L. Wickes and W.G. Merz. 1988. Association of electrophoretic karyotypes of Candida stellatoidea with virulence for mice. Infect. Immun. 56, 1814-1819. Kwon-Chung, K.J., A. Varma and D.H. Howard. 1990. Ecology of Cryptococcus neoformans and prevalence of its two varieties in AIDS and non-AIDS associated cryptococcosis. In: H. Vanden Bossche, D.W.R. Mackenzie, G. Cauwenbergh, J. van Cutsem, E. Drouhet and B. Dupont (Eds.), Mycoses in AIDS Patients. Plenum Press, New York, pp. 103-113. Kwon-Chung, K.J., B.L. Wickes, L. Stockman, G.D. Roberts, D. Ellis and D.H. Howard. 1992. Virulence, serotype and molecular characteristics of environmental strains of Cryptococcus neoformans var. gattii. Infect. Immun. 60, 1869-1874. Kwon-Chung, K.J., Y.C. Chang, R. Bauer, E.C. Swann, J.W. Taylor and R. Goel. 1995. The characteristics that differentiate Filobasidiella depauperata fi^om Filobasidiella neoformans. Stud. Mycol. 38, 6 7 79. Laaser, G., K.-D. Jahnke, H. Prillinger, R. Bauer, P. Hoffmann, G. Demi and F. Oberwinkler. 1988. A new tremelloid yeast isolated from Asterophora lycoperdoides (Bull.:Fr.) Ditm. Antonie van Leeuwenhoek 54, 57-14. Laaser, G., E. MoUer, K.-D. Jahnke, G. Bahnweg, H. Prillinger and H.H. Prell. 1989. Ribosomal DNA restriction fi-agment analysis as a taxonomic tool in separating physiologically similar basidiomycetous yeasts. Syst. Appl. Microbiol. 11, 170-175. Lachance, M.A. 1980. Simple method for determination of deoxyribonucleic acid relatedness by thermal elution in hydroxyapatite microcolumns. Int. J. Syst. Bacteriol. 30, 433-436. Lachance, M.A. 1981. Hanseniaspora nodinigri, a new yeast species found in black knots (Dibotryon morbosum) of Prunus uirginiana. Can. J. Microbiol. 27, 651-653. Lachance, M.A. 1982a. Sporopachydermia quercuum, a new yeast species found in exudates of Quercus rubra. Can. J. Microbiol. 28, 567-571. Lachance, M.A. 1982b. Reaction of an ascomycetous yeast with diazonium blue B. Can. J. Microbiol. 28, 1194-1195. Lachance, M.A. 1987. Approaches to yeast identification. In: D.R. Berry, I. Russell and G.G. Stewart (Eds.), Yeast Biotechnology. Allen and Unwin, London, pp. 33-51. Lachance, M.A. 1989. Restriction mapping of rDNA and the taxonomy of Kluyveromyces van der Walt emend, van der Walt. Yeast 5, S379S383. Lachance, M.A. 1990a. Ribosomal DNA spacer variation in the cactophiHc yeast Clauispora opuntiae. Mol. Biol. Evol. 7, 178-193. Lachance, M.A. 1990b. Yeast selection in nature. In: C.J. Panchal (Ed.), Yeast Strain Selection. Marcel Dekker, New York, pp. 2 1 ^ 1 .

982

References

Lachance, M.A. 1993. Metschnikowia agaueae sp. nov., a heterothallic haploid yeast from blue agave. Can. J. Microbiol. 39, 562-566. Lachance, M.A. 1994. Yeast communities in a natural tequila fermentation. Antonie van Leeuwenhoek 68, 151-160. Lachance, M.A., and H.J. Phaflf. 1979. Comparative study of molecular size and structure of exo-(3-glucanases from Kluyveromyces and other yeast genera: evolutionary and taxonomic implications. Int. J. Syst. Bacteriol. 29, 70-78. Lachance, M.A., and W.T. Starmer. 1982. Evolutionary significance of physiological relatedness among yeast communities associated with tree exudates. Can. J. Bot. 60, 285-293. Lachance, M.A., and W.T. Starmer. 1986. The community concept and the problem of non-trivial characterization of yeast communities. Coenoses 1, 21-28. Lachance, M.A., M. Miranda, M.W. Miller and H.J. Phafif. 1976. Dehiscence and active spore release in pathogenic strains of the yeast Metschnikowia bicuspidata var. australis: possible predatory implication. Can. J. Microbiol. 22, 1756-1761. Lachance, M.A., H.J. Phaff, W.T. Starmer, A. Moffitt and L.G. Olson. 1986. Interspecific discontinuity in the genus Clauispora Rodrigues de Miranda by phenetic analysis, genomic deoxyribonucleic acid reassociation, and restriction mapping of ribosomal deoxyribonucleic acid. Int. J. Syst. Bacteriol. 36, 524-530. Lachance, M.A., H.J. Phafif and W.T. Starmer. 1988. Identification of yeasts found in decaying cactus tissue. Can. J. Microbiol. 34, 10251036. Lachance, M.A., W.T. Starmer and H.J. Phafif. 1990. Metschnikowia hawaiiensis sp. nov., a heterothallic haploid yeast from Hawaiian morning glory and associated drosophilids. Int. J. Syst. Bacteriol. 40, 415^20. Lachance, M.A., H.J. Phafif and W.T. Starmer. 1993. Kluyveromyces bacillisporus sp. nov, a yeast from Emory oak exudate. Int. J. Syst. Bacteriol. 43, 115-119. Lachance, M.A., P. Nair and P. Lo. 1994. Mating in the heterothallic haploid yeast Clauispora opuntiae, with special reference to mating type imbalances in local populations. Yeast 10, 895-906. Laflfin, R.J., and VM. Cutter. 1959a. Investigations on the life cycle of Sporidiobolus johnsonii. I. Irradiation and cytological studies. J. Elisha Mitchell Sci. Soc. 75, 89-96. Lafifin, R.J., and VM. Cutter. 1959b. Investigations on the life cycle of Sporidiobolus johnsonii. II. Mutants and micromanipulation. J. Elisha Mitchell Sci. Soc. 75, 97-100. Lake, J.A. 1987. A rate-independent technique for analysis of nucleic acid sequences: evolutionary parsimony. Mol. Biol. Evol. 4, 167-191. Lalitha, C.R., and K.M. Leelavathy. 1990. A coccid association in Auriculoscypha and its taxonomic significance. Mycol. Res. 94, 571572. Land, G.A., I.E Salkm, M. El-Zaatari, M. McGinnis and G. Hashem. 1991. Evaluation of the Baxter-Microscan 4-hour enzyme-based yeast identification system. J. Clin. Microbiol. 29, 718-722. Landrieu, M. 1912. Les Mycoses Oculaires, These. Faculte de Medecine de Paris. Poinat, Paris. Landvik, S. 1996. Neolecta, a fruit-body-producing genus of the basal ascomycetes, as shown by SSU and LSU rDSNA sequences. Mycol. Res. 100, 199-202. Lane, D.J., B. Pace, G.J. Olsen, D.A. Stahl, M.L. Sogin and N.R. Pace. 1985. Rapid determination of 16S ribosomal RNA sequences for phylogenetic analyses. Proc. Natl. Acad. Sci. USA 82, 6955-6959. Langeron, M. 1922. Un nouveau Sporotrichum malgache, S. carougeaui Langeron 1913 et remarques sur les Sporotriches. Bull. Soc. Pathol. Exot. 15, 453^59. Langeron, M., and P. Guerra. 1935. Bases morphologiques et biologiques de la classification des champignons levuriformes anascospores. Proc. 6th Int. Bot. Congress Amsterdam, 2, 165-167. Langeron, M., and P. Guerra. 1938. Nouvelles recherches de zymologie medicale. 2me Partie. Etudes monographiques sur les Mycotoruloidees. Le genre Candida Berkhout 1923. Ann. Parasitol. Hum. Comp. 16, 36-179, 429^76, 481-525.

Langeron, M., and P. Guerra. 1939. Remarques sur le Candida stellatoidea (Jones et Martin 1938). Ann. Parasitol. Hum. Comp. 17, 257-260. Langeron, M., and P. Guerra. 1940. Valeur et nature des variations et dissociations de colonies chez les champignons levuriformes. Ann. Parasitol. Hum. Comp. 17, 447^69. Langeron, M., and P. Guerra. 1941. Les secteurs clairs et sombres des colonies de levures. Ann. Parasitol. Hum. Comp. 18, 95-111. Langeron, M., and R.-V Talice. 1932. Nouvelles methodes d'etude et essai de classification des champignons levuriformes. Ann. Parasitol. Hum. Comp. 10, 1-80. Larocco, M., A. Dorenbaun, A. Robinson and L.K. Pickering. 1988. Recovery of Malassezia pachydermatis from eight infants in a neonatal intensive care nursery: clinical and laboratory features. Pediatr. Infect. Dis. J. 7, 398^01. Last, F.T. 1955. Seasonal incidence of Sporobolomyces on cereal leaves. Trans. Br. Mycol. Soc. 38, 221-239. Last, F.T, and D. Price. 1969. Yeasts associated with living plants and their environs. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, 1st edn., vol. I. Academic Press, New York, pp. 183-218. Laurenavichene, D.A., A.Ya. Lugauskas and T.F. lokautaite. 1989. Species composition and size of the population of yeasts and yeastlike fiingi found in the surface of polymer materials. Liet TSR Mokslu Akad. Darb. Ser. Biol. Moksla 1, 12-17. Laurent, E. 1889. Observations sur le champignon du muguet. Bull. Soc. Beige Microscopic 16, 14-18. Lavie, P. 1954. Essais de lutte biologique contre VAcarapis woodii, agent de I'acariose de I'abeille. C.R. Acad. Sci. 238, 947-948. Leask, B.G.S., and D. Yarrow. 1976. Pichia noruegensis sp. nov. Sabouraudia 14, 61-63. Leberle, H. 1909. Beitrage zur Kenntnis der Gattung Mycoderma, Thesis. Kastner u. Callway, Miinchen. Lee, C.-E, E-L. Lee, W.-H. Hsu and WH. Hsu. 1993. DNA reassociation and electrokaryotype study of some Candida species and synonymy of Candida terebra, Candida entomaea, and Candida ueronae. Can. J. Microbiol. 39, 864-867. Lee, C.-E, E-L. Lee, W.-H. Hsu and H.J. Phafif. 1994a. Arthroascus fermentans, a new yeast species isolated from soil in Taiwan. Int. J. Syst. Bacteriol. 44, 303-307. Lee, C.-E, E-L. Lee and W.-H. Hsu. 1994b. Synonymy of Candida methylica with Candida boidinii and of Candida methanolophaga with Candida succiphila. Int. J. Syst. Bacteriol. 44, 839-841. Lee, E-L., and S.-C. Jong. 1985. Dekkera claussenii sp. nov., the perfect state of Brettanomyces claussenii. Mycotaxon 23, 275-278. Lee, E-L., and S.-C. Jong. 1986a. New species of Dekkera custersiana andD. lambica, teleomorphs of Brettanomyces. Mycotaxon 25, 455460. Lee, E-L., and S.-C. Jong. 1986b. The new species Dekkera abstinens, teleomorph of Brettanomyces abstinens. Mycologia 78, 150-151. Lee, E-L., C.-E Lee, S. Okada, W.-H. Hsu and M. Kozaki. 1992. Chemotaxonomic comparison of osmotolerant yeasts isolated from "Inyu" (black soybean sauce) mash in Taiwan and "Shoyu" (soybean sauce) mash in Japan. Bull. Japan. Fed. Cult. Coll. 8, 11-17. Lee, E-L., C.-E Lee, S. Okada, T. Uchimura, K. Komagata and M. Kozaki. 1993. Candida galacta comb, nov, a new combination for Candida apis var. galacta. Int. J. Syst. Bacteriol. 43, 183-184. Lee, J.-D., and K. Komagata. 1980a. Taxonomic study of methanolassimilating yeasts. J. Gen. Appl. Microbiol. 26, 133-158. Lee, J.-D., and K. Komagata. 1980b. Pichia cellobiosa, Candida cariosilignicola and Candida succiphila, new species of methanolassimilating yeasts. Int. J. Syst. Bacteriol. 30, 514-519. Lee, J.-D., and K. Komagata. 1983. Further taxonomic study of methanol-assimilating yeasts with special reference to electrophoretic comparison of enzymes. J. Gen. Appl. Microbiol. 29, 395-416. Lee, M.-H. 1974. A new species of yeast: Rhodotorula sinensis Lee sp. nov. Acta Microbiol. Sin. 14, 143-156. Leeming, J.P., and EH. Notman. 1987. Improved methods for isolation

References and enumeration of Malassezia furfur from human skin. J. Clin. Microbiol. 25, 2017-2019. Legakis, Ph.A. 1961. A contribution to the study of the yeast flora of apples and apple wine, Thesis. University of Athens. In Greek. Legendre, L., and P. Legendre. 1983. Numerical Ecology. Elsevier, Amsterdam, 419pp. Lehmann, P.E, L.E. Cowan, R.M. Jones and W.J. Ferencak. 1987a. Use of killer fungi and antifungal chemicals in characterization of yeast species and biotypes. Trans. Br. Mycol. Soc. 88, 199-206. Lehmann, P.E, M.B. Lemon and W.J. Eerencak. 1987b. Antifungal compounds ("killer factors") produced by Kluyveromyces species and their detection on an improved medium containing glycerol. Mycologia 79, 790-794. Lehmann, PE, L.-C. Wu, S.A. Meyer and D.G. Aheam. 1991. Isoenzymes and DNA homology studies of Candida haemulonii. Abstr. XI Congr. ISHAM, p. 63. Lehmann, PE, L.-C. Wu, WR. Pruitt, S.A. Meyer and D.G. Ahearn. 1993. Unrelatedness of groups of yeasts within the Candida haemulonii complex. J. Clin. Microbiol. 31, 1683-1687. Lembke, A. 1943. Ergebnisse der Theoretischen und Angewandten Mikrobiologie. Bd. I. Systematik der Schimmelpilze. Verlag J. Neumann, Neudamm. Leupold, U 1950. Die Vererbung von Homothallic und Heterothallic bei Schizosaccharomyces pombe. C.R. Trav. Lab. Carlsberg, Ser. Physiol. 24, 3 8 1 ^ 8 0 . Levin, M.A., R.J. Seidler and M. Rogul (Eds.). 1992. Microbial Ecology, Principles, Methods, and Applications. McGraw-Hill, New York, 945pp. Lewis, Y.S., and D.S. Johar. 1955. An acid tolerant yeast from tamarind. Science and Culture 21, 220-222. Li, M. 1982. Studies on Sporobolomycetaceae 1. Taxonomy of Bullera. Acta Microbiol. Sin. 22, 17-25. Ligon, J.M., PL. Bolen, D.S. Hill, R.J. Bothast and C.P Kurtzman. 1989. Physical and biological characterization of linear DNA plasmids of the yeast Pichia inositovora. Plasmid 21, 185-194. Lin, D., L.-C. Wu, M.G. Rinaldi and PE Lehmann. 1995. Three distinct genotypes within Candida parapsilosis from clinical sources. J. Clin. Microbiol. 33, 1815-1821. Lin, Y.H., E.-L. Lee and W.-H. Hsu. 1996. Molecular and chemical taxonomic differentiation of Candida boidinii Ramirez strains. Int. J. Syst. Bacteriol. 46, 352-355. Lindau, G. 1907. Eungi imperfecti: Hyphomycetes. In: L. Rabenhorst (Ed.), Kryptogamen-Elora von Deutschland, Osterreich und der Schweiz, 1 Pilze, VIII Abt. Ed. Kummer, Leipzig. Lindegren, C.C. 1949. The Yeast Cell, its Genetics and Cytology. Educational Publishers Inc., St. Louis. Lindegren, C.C, and G. Lindegren. 1949. Unusual gene-controlled combinations of carbohydrate fermentations in yeast hybrids. Proc. Natl. Acad. Sci. USA 35, 23-27. Linder, D.H. 1940. Evolution of the Basidiomycetes and its relation to the terminology of the basidium. Mycologia 32, 419-447. Lindner, P. 1893. Schizosaccharomyces pombe n. sp. neuer Garungserreger. Wochenschr. Brau. 10, 1298-1300. Lindner, P. 1894. Saccharomyces farinosus und Saccharomyces bailii. Zwei neue Hefenarten aus Danziger Jopenbier. Wochenschr. Brau. 11, 153-156. Lindner, P. 1895. Mikroskopische Betriebskontrolle in den Garungsgewerben mit einer Einfuhrung in die Hefenreinkultur, Infektionslehre und Hefenkunde. P. Parey, Berlin. Lindner, P. 1898a. Mikroskopische Betriebskontrolle in den Garungsgewerben, 2te Aufl. P. Parey, Berlin. Lindner, P. 1898b. Monilia variabilis, eine formenreiche und rassenhaltige neue Pilzart. Wochenschr. Brau. 15, 209-213. Lindner, P. 1901. Mikroskopische Betriebskontrolle in den Garungsgewerben, 3te Aufl. P. Parey, Berlin. Lindner, P. 1904. Neue Erfahrungen aus dem letzten Jahre in Bezug der Hefen und Garung. Jahrb. Vers. Lehranst. Brau. Berlin 7, 4 4 1 ^ 6 4 . Lindner, P. 1905a. Die Assimilierbarkeit der Selbstverdauungsprodukte

983

der Bierhefe durch verschiedene Heferassen und Pilze. Mitteilung 1. Wochenschr. Brau. 22, 528-530. Lindner, P. 1905b. Mikroskopische Betriebskontrolle in den Garungsgewerben, 5te Aufl. P. Parey, Berlin. Lindner, P. 1907. Endomyces fibuliger n. sp., ein neuer Garungspilz und Erzeuger der sog. Kreidekrankheit des Brotes. Wochenschr. Brau. 24, 469^74. Lindner, P., and E.G. Genoud. 1913, Zur Charakteristik der Willia belgica und einiger Hefen aus belgischem Lambicbier. Wochenschr. Brau. 30, 363-367. Link, H.E 1809. Observationes in ordines plantarum naturales. Mag. Ges. Naturf Ereunde 3, 3-23. Link, H.E. 1824. Species plantarum. Vol. 6, Berolini. Lipinski, C , A.J. Eerro and D. Mills. 1976. Macromolecule synthesis in a mutant of Saccharomyces cereuisiae inhibited by iS-adenosylmethionine. Mol. Gen. Genet. 144, 301-306. Liu, Z., and C.P. Kurtzman. 1991. Phylogenetic relationships among species of Williopsis and Saturnospora gen. nov. as determined from partial rRNA sequences. Antonie van Leeuwenhoek 60, 21-30. Lloyd, C.J. 1922. Myc. Writ. 7, 1152. Lochhead, A.G. 1942. Zygosaccharomyces nectarophilus n. sp. and Zygosaccharomyces rugosus n. sp. Can. J. Res. 20, 89-91. Lochhead, A.G., and D.A. Heron. 1929. Microbiological studies of honey. Bull. 116 - New Series, Dept. Agric. Dom. Canada. Locquin, M. 1984. Mycologie Generale et Structurale. Masson, Paris, 551pp. Lodder, J. 1932. Uber einige durch das 'Centraalbureau voor Schimmelcultures' neuerworbene sporogene Hefearten, Zentralbl. Bakteriol. Parasitenkd., Abt. II, 86, 227-253. Lodder, J. 1934. Die anaskosporogenen Hefen, I. Halfte. Verb. K. Ned. Akad. Wet., Afd. Natuurk., Sect. II, 32, 1-256. Lodder, J. 1938. Torulopsis or Cryptococcusl Mycopathol. Mycol. Appl. 1, 62-67. Lodder, J. 1970. General classification of the yeasts. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 1-33. Lodder, J., and N.E de Vries. 1938. Some notes on Torulopsis glabrata (Anderson) nov. comb. Mycopathol. Mycol. Appl. 1, 98-103. Lodder, J., and N.J.W Kreger-van Rij. 1952. The Yeasts, A Taxonomic Study. North-Holland, Amsterdam. Lodder, J., and N.J.W. Kreger-van Rij. 1978. Proposal (446) for the conservation of the generic name Debaryomyces Lodder et Kreger-van Rij against Debaryomyces Klocker. Taxon 27, 306-307. Lodder, J., and N.J.W. Kreger-van Rij. 1979. Debaryomyces or Debaryozymal Int. J. Syst. Bacteriol. 29, 413. Lodge, J.K., E. Jackson-Machelski, D.L. Toffaletti, J.R. Perfect and J.I. Gordon. 1994. Targeted gene replacement demonstrates that myristoyl-CoA: protein A/^-myristoyltransferase is essential for viability of Cryptococcus neoformans. Proc. Natl. Acad. Sci. 91, 12008-12012. Lodolo, E.J., ET. Rossouw and N.P Eerreira. 1990. Mitochondrial DNA analyses of the Lipomycetaceae. Syst. Appl. Microbiol. 13, 1-7. Lolle, S.J., and H. Bussey. 1986. In vivo evidence for signal cleavage of the killer preprotoxin of Saccharomyces cereuisiae. Mol. Cell. Biol. 6, 4274-^280. Lomascola, A., E. Dubreucq, V Perrier and P. Galzy. 1994. Study of lipids in Lipomyces and Waltomyces. Can. J. Microbiol. 40, 724-729. Lowy, B. 1971. Tremellales. Elora Neotropica, Monograph No. 6. Hafner, New York, 153pp. Lowy, B. 1980. Supplement to Neotropical Tremallales. In: Elora Neotropica, Monograph 6. The New York Botanical Garden for Org. Elora Neotropica, New York. Lu, X.H., and M.X. Li. 1989. A new species of yeast - Pichia hangzhouana Lu et Li. Acta Mycol. Sin. 8, 251-255. Lu, X.H., and M.X. Li. 1991. Some new species and records of Trichosporon in China. Acta Micol. Sin. 10, 4 3 ^ 9 . In Chinese, with English abstract.

984

References

Lucet, A. 1901. Contribution a I'etude etiologique et pathogenique de la langue noire pileuse. Arch. Parasitol. 4, 262-287. Ludwig, F. 1886. Ueber Alkoholgarung und Schleimfluss lebender Baume und deren Urheber. Ber. Dtsch. Bot. Ges. 4, 17-27. Ludwig, F. 1891. Der Milch- und Rothfluss der Baume und ihre Urheber. Vorlaufige Mitt. Zentralbl. Bakteriol. Parasitenkd. 10, 10-13. Ludwig, F. 1896. Sur les organismes des ecoulements des arbres. Rev. Mycol. Toulouse 18, 45-57, 114-123. Lurie, H.I., and H.J. Shadomy. 1971. Morphological variations of the hyphae-forming strain of Cryptococcus neoformans (Coward strain) in tissues of mice. Sabouraudia 9, 10-14. Lushbaugh, W.B., E.D. Rowton and R.B. McGhee. 1976. Redescription of Coccidiascus legeri Chatton, 1913 (Nematosporaceae: Hemiascomycetidae), an intracellular, parasitic, yeast-like fungus from the intestinal epithelium of Drosophila melanogaster. J. Invertebr. Pathol. 28, 93-107. Luteraan, P.J. 1954. Hansenula ellipsoidospora nov. sp. Rev. Mycol. 19, 85-97. Macfie, J.W.S. 1921. Notes on some fungal infections in West Africa. Ann. Trop. Med. Parasitol. 15, 271-282. Mackenzie, D.W.R., and B.J. Auret. 1963. Rhodotorula nitens sp. nov. isolated from the atmosphere. J. Gen. Microbiol. 31, 171-177. Mackinnon, J.E. 1936. Carateres y grado de la virulencia experimental de las Torulopsidaceas de la sub-familia Micotoruleas (Monilias). Ann. Fac. Med. Montevideo 21, 320. MacLeod, R.A. 1965. The question of the existence of specific marine bacteria. Bacteriol. Rev. 29, 9-23. Macy, J.M., and M.W. Miller. 1971. Endomyces tetrasperma, sp. n. J. Bacteriol. 105, 637-645. Madelin, M.F, and A. Feest. 1982. Dipodascus macrosporus sp. nov. (Hemiascomycetes), associated with plasmodia of Badhamia utricularis. Trans. Br. Mycol. Soc. 79, 331-380. Magee, B.B., T.M. D'Souza and PT. Magee. 1987. Strain and species identification by restriction fi*agment length polymorphisms in the ribosomal DNA repeat of Candida species. J. Bacteriol. 169, 16391643. Mager, J., and M. Aschner. 1947. Biological studies on capsulated yeasts. J. Bacteriol. 53, 283-295. Mahoney, D.P., and J.S. LaFavre. 1981. Coniochaeta extramundana, with a synopsis of other Coniochaeta species. Mycologia 73, 931-952. Mahrous, M., T. Lott, S.A. Meyer, S.D. Savant and D.G. Ahearn. 1990. Electrophoretic karyotyping of typical and atypical Candida albicans. J. Clin. Microbiol. 28, 876-881. Mahul, P., M.-A. Piens, D. Guyotat, J. Godard, E. Archimbaud, B. BuiXuan and J. Motin. 1989. Disseminated Geotrichum capitatum infection in a patient with acute myeloid leukemia. Mycoses 32, 5 7 3 577. Makower, M., and E.A. Bevan. 1963. The inheritance of a killer character in yeast (Sacchawmyces cereuisiae). Proc. Int. Congr. Genet. XI, 1, 202. Malloch, D., J. Kane and D.G. Lahaie. 1978. Filobasidiella arachnophila sp. nov Can. J. Bot. 56, 1823-1826. Manachini, PL. 1979. DNA sequence similarity, cell wall mannans, and physiological characteristics in some strains of Candida utilis, Hansenula jadinii and Hansenula petersonii. Antonie van Leeuwenhoek 45, 451-463. Maniatis, T , A. Jeffrey and D.G. Kleid. 1975. Nucleotide sequence of the rightward operator of phage. Proc. Natl. Acad. Sci. USA 72, 11841188. Mao, J., B. Appel, J. Schaack, S. Sharp, H. Yamada and D. Soil. 1982. The 5S RNA genes of Schizosaccharomyces pombe. Nucleic Acids Res. 10, 487-500. Marchant, H.J. 1976. Plasmodesmata in algae and fungi. In: B.E.S. Gunning and A.W. Robards (Eds.), Intercellular Communication in Plants: Studies on Plasmodesmata. Springer, Heidelberg, pp. 59-80. Marchant, R. 1979. Wall growth during spore differentiation and germination. In: J.H. Burnett and A.P.J. Trinci (Eds.), Fungal Walls and

Hyphal Growth. Cambridge University Press, Cambridge, pp. 115148. Marcilla, J., and E. Feduchy. 1943. Contribucion al estudio de una levadura perteneciente al genero Saccharomycodes, capaz de fermentar mostos de uva fuertemente sulfitados (mostos azufrados), sin previa desulfitacion. Centros de Estudios Generales y de Ampelografia y Viticultura, Cuaderno No. 29. Marcilla, J., E. Feduchy and J.M. Gomes. 1945. Contribucion al estudio de levaduras salvajes y cultivadas, de las microfloras espafiiola y portuguesa. Trab. Inst. Cajal. Invest. Biol. 3, 161-191. Marengo, G. 1926. Su di una paronichia dovuta ad una nuova specie di Monilia: la Monilia onychophila Pollacci e Nannizzi. Arch. Biol. 3, 25-36. Maresca, B., and G.S. Kobayashi. 1989. Dimorphism in Histoplasma capsulatum: a model for the study of cell differentiation in pathogenic fiingi. Microbiol. Rev 53, 186-209. Markham, P. 1994. Occlusions of septal pores in filamentous fiingi. Mycol. Res. 98, 1089-1106. Markham, P., and A.J. Collinge. 1987. Woronin bodies of filamentous fiingi. FEMS Microbiol. Rev 46, 1-11. Marks, J., I.M. Hagan and J.S. Hyams. 1986. Growth polarity and cytokinesis in fission yeast: the role of the cytoskeleton. J. Cell Sci., Suppl. 5, 229-241. Marmur, J. 1961. A procedure for the isolation of DNA from microorganisms. J. Mol. Biol. 3, 208-218. Marmur, J., and P. Doty. 1962. Determination of the base composition of DNA from its thermal denaturation temperature. J. Mol. Biol. 5, 109-118. Marmur, J., R. Rownd and C.L. Schildkraut. 1963. Denaturation and renaturation of DNA. Progr. Nucl. Acid Res. Mol. Biol. 1, 231-300. Martin, D.S., C.P Jones, K.F Yao and L.E. Lee Jr. 1937. A practical classification of the Monilias. J. Bacteriol. 34, 99-129. Martin, G.W 1945. The classification of the Tremellales. Mycologia 37, 527-542. Martin, G.W. 1952. Revision of the North Central Tremellales. Univ. Iowa Stud. Nat. Hist. 19, 1-122. Martinac, B., H. Zhu, A. Kubalski, X. Zhou, M. Culbertson, H. Bussey and C. Kung. 1990. Yeast Kl toxin forms ion channels in sensitive yeast spheroplasts and in artificial liposomes. Proc. Natl. Acad. U.S.A. 87, 6228-6232. Martinez, A.T 1979. Ultrastructure of Moniliella, Trichosporonoides and Hyalodendron. Stud. Mycol. 19, 50-57. Martinez, A.T., G.S. de Hoog and M.Th. Smith. 1979. Physiological characteristics of Moniliella, Trichosporonoides and Hyalodendron. Stud. Mycol. 19, 58-68. Martinez, A.T, A.E. Gonzalez, L. Abarca and J. Cabaiies. 1990. A new Botryoascus from the air of a poultry farm. Can. J. Bot. 68, 17381740. Martini, A. 1973. Ibridazioni DNA/DNA tra specie di lieviti del genere Kluyveromyces. Ann. Fac. Agrar. Univ. Studi Perugia 28, 157-171. Martini, A., and H.J. Phaflf. 1973. The optical determination of DNADNA homologies in yeasts. Ann. Microbiol. 23, 59-68. Martini, A., and A. Vaughan-Martini. 1992. Assignment of Kluyveromyces cellobiovorus nomen nudum to Candida intermedia (Ciferri and Ashford) Langeron et Guerra. Antonie van Leeuwenhoek 61, 5 7 60. Martini, A., H.J. Phafif and S.A. Douglass. 1972. Deoxyribonucleic acid base composition of species in the yeast genus Kluyveromyces van der Walt emend, van der Walt. J. Bacteriol. I l l , 481-487. Marvanova, L. 1976. Two new Blastobotrys species. Trans. Br. Mycol. Soc. 66, 217-222. Marvanova, L., and K. Suberkropp. 1990. Camptobasidium hydrophilum and its anamorph, Crucella subtilis: a new heterobasidiomycete from streams. Mycologia 82, 208-217. Masuda, Y, K. Kato, Y Takayama, K. Kida and M. Nakanishi. 1975. Ethanol assimilating yeast. U.S. Patent 3 868305. Matile, Ph., H. Moore and C.F. Robinow. 1969. Yeast cytology. In:

References A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. 1. Academic Press, New York, pp. 219-302. Matthewson, D.K., and J. A. Barnett. 1974. The effects of different carbon sources and changes in the growth medium on the shape of cells of the yeast Trigonopsis variabilis. J. Gen. Microbiol. 83, 4 2 7 ^ 3 0 . Mattlet, G. 1926. Mycoses dans I'urundi. Ann. Soc. Beige Med. Trop. 6, 1 ^ 1 . Maze, P. 1910. Technique fromagere, theorie et pratique. Ann. Inst. Pasteur 24, 395-562. Mazza, S., and M. de los Rios. 1931. Sobre un caso de moniliasis vaginal. Bol. Inst. Clin. Quir. 6, 215-225. Mazza, S., and F.L. Niiio. 1933. 8a Reun. Soc. Arg. Pat. Reg. del Norte 27, 293 (cited by Lodder and Kreger-van Rij 1952). Mazza, S., and B. Palamedi. 1932. Caso mortal de blastomicosis cutaneo mucosa. Reunion de la Sociedad Argentina de Patologia Regional del Norte, Bol. Inst. Clin. Quir. 7, 424-467. Mazza, S., F.L. Niilo and A. Egiies. 1930. Perionixis blastomycetuca por Monilia (n. sp.). Bol. Inst. Clin. Quirur. 5, 284-288. Mazza, S., F.L. Nino, H. Quintana and V Bernasconi. 1931. Blastomicosis grave generalizada por Monilia (n. sp.). Bol. Inst. Clin. Quirurg. Univ. Buenos Aires 6, 180-214. McArthur, C.R., and G.D. Clark-Walker. 1983. Mitochondrial DNA size diversity in the Dekkera/Brettanomyces yeasts. Curr. Genet. 7, 29-35. McCarroll, R., G.J. Olsen, YD. Stahl, C.R. Woese and M.L. Sogin. 1983. Nucleotide sequence of the Dictyostelium discoideum smallsubunit ribosomal ribonucleic acid inferred from the gene sequence: evolutionary implications. Biochemistry 22, 5858-5868. McClary, D.O., W.L. Nulty and G.R. Miller. 1959. Effect of potassium versus sodium in the sporulation of Saccharomyces. J. Bacteriol. 78, 362-368. McCullough, J., and I. Herskowitz. 1979. Mating pheromones of Saccharomyces kluyveri: pheromone interactions between Saccharomyces kluyveri and Saccharomyces cerevisiae. J. Bacteriol. 138, 146154. McCully, E.K., and C.F. Robinow. 1972a. Mitosis in heterobasidiomycetous yeasts. I. Leucosporidium scottii (Candida scottii). J. Cell Sci. 10, 857-881. McCully, E.K., and C.F. Robinow. 1972b. Mitosis in heterobasidiomycetous yeasts. II. Rhodosporidium sp. (Rhodotorula glutinis) and Aessosporon salmonicolor (Sporobolomyces salmonicolor). J. Cell Sci. 11, 1-31. McFarland, L.V, and P. Bernasconi. 1993. Saccharomyces boulardii: a review of an innovative biotherapeutic agent. Microb. Ecol. Health Disease 6, 157-171. McGinnis, M.R., D.H. Walker and I D . Folds. 1980. Hansenula polymorpha infection in a child with chronic granulomatous disease. Arch. Pathol. Lab. Med. 104, 290-292. McKenzie, R.A., M.D. Connole, M.R. McGinnis and R. Lepelaar. 1984. Subcutaneous phaeohyphomycosis caused by Moniliella suaveolens in two cats. Vet. Pathol. 21, 582-586. McKerracher, L.J., and LB. Heath. 1987. Cytoplasmic migration and intracellular organelle movements during tip growth of fungal hyphae. Exp. Mycol. 11, 79-100. McLaughlin, R.J., C.L. Wilson, E. Chalutz, C.R Kurtzman, W E Fett and S.F. Osman. 1990. Characterization and reclassification of yeasts used for biological control of postharvest diseases of fruits and vegetables. Appl. Environ. Microbiol. 56, 3583-3586. McNabb, R.F.R., and RH.B. Talbot. 1973. Holobasidiomycetidae: Exobasidiales, Brachybasidiales, Dacrymycetales. In: G.C. Ainsworth, F.K. Sparrow and A.S. Sussman (Eds.), The Fungi, Vol. IV B. Academic Press, New York, pp. 317-325. McNaughton, S.J., and L.L. Wolf 1979. General Ecology. Hoh Rinehart Winston, New York, 702pp. McRobert, S.P. 1986. The effects of yeast on sexual behaviour in Drosophila melanogaster. Behav. Neural. Biol. 45, 150-154. Melard, L. 1910. Note sur un organisme isole d'une biere de fermentation haute. Le Petit J. du Brasseur 18, 1049-1051. Mellor, J., M.J. Dobson, N.A. Roberts, M.F. Tuite, J.S. Emtage,

985

S. White, PA. Lowe, T. Patel, A.J. Kingsman and S.M. Kingsman. 1983. Efficient synthesis of enzymatically active calf chymosin in Saccharomyces cerevisiae. Gene 24, 1-14. Mendel, E.B., S. Haberman and D.K. Hall. 1960. Isolation of Candida from clinical specimens. Comparative study of Pagano-Levin and Nickerson's culture media. Obstet. Gynecol. 16, 180-184. Mendonga-Hagler, L.C., and H.J. Phaff 1975. Deoxyribonucleic acid base composition and deoxyribonucleic acid/deoxyribonucleic acid hybrid formation in psychrophobic and related yeasts. Int. J. Syst. Bacteriol. 25, 222-229. Mendonga-Hagler, L.C., L.R. Travassos, K.O. Lloyd and H.J. Phaff. 1974. Deoxyribonucleic acid base composition and hybridization studies on the human pathogen Sporothrix schenckii and Ceratocystis species. Infect. Immunity 8, 674-680. Mendonga-Hagler, L.C., A.N. Hagler, H.J. Phaff and J. Tredick. 1985. DNA relatedness among aquatic yeasts of the genus Metschnikowia and proposal of the species Metschnikowia australis comb. nov. Can. J.Microbiol. 31, 905-909. Mendon9a-Hagler, L.C., A.N. Hagler and C.R Kurtzman. 1993. Phylogeny of Metschnikowia species estimated from partial rRNA sequences. Int. J. Syst. Bacteriol. 43, 368-373. Merz, W.G., U. Khazan, M.A. Jabra-Rizk, L.C. Wu, G.J. Osterhout and P.F. Lehman. 1992. Strain delineation and epidemiology of Candida (Clavispora) lusitaniae. J. Clin. Microbiol. 30, 4 4 9 ^ 5 4 . Messner, R., H. Prillinger, F. Altmann, K. Lopandic, K. Wimmes, O. Molnar and F. Weigang. 1994. Molecular characterization and application of random amplified polymorphic DNA analysis of Mrakia and Sterigmatomyces. Int. J. Syst. Bacteriol. 44, 694-703. Messner, R., H. Prillinger, M. Ibl and G. Himmler. 1995. Sequences of ribosomal genes and internal transcribed spacers move three plant parasitic fungi, Eremothecium ashbyi, Ashbya gossypii, and Nematospora coryli, towards Saccharomyces cerevisiae. J. Gen. Appl. Microbiol. 41, 3 1 ^ 2 . Metschnikoff, E. 1884. Uber eine Sprosspilzkrankheit der Daphnien. Beitrag zur Lehre bei dem Kampf der Phagocyten gegen Krankheitserreger. Arch. Pathol. Anat. Physiol. R. Virchow 96, 177-195. Metzler, B., F. Oberwinkler and H. Petzold. 1989. Rhynchogastrema gen. nov. and Rhynchogastremaceae fam. nov. (Tremellales). Syst. Appl. Microbiol. 12, 280-287. Meyer, M.T., and H.J. Phaff 1977. Survey for a ( l -^ 3)-glucanase activity among yeasts. J. Bacteriol. 131, 702-706. Meyer, M.T., and H.J. Phaff. 1980. Purification and properties of (1 ^ 3)-a-glucanases from Bacillus circulans WL-12. J. Gen. Microbiol. 118, 197-208. Meyer, S.A. 1979. DNA relatedness between physiologically similar strains and species of yeasts of medical and industrial importance. In: S. Garrattini, S. Paglialunga and N.S. Scrimshaw (Eds.), Investigation of Single Cell Protein. Pergamon Press, New York, pp. 13-19. Meyer, S.A., and D.G. Ahearn. 1983. Validation of the names of some Candida species. Mycotaxon 17, 297-298. Meyer, S.A., and H.J. Phaff. 1969. Deoxyribonucleic acid base composition in yeasts. J. Bacteriol. 97, 52-56. Meyer, S.A., and H.J. Phaff. 1972. DNA base composition and DNADNA homology studies as tools in yeast systematics. In: A. KockovaKratochvilova and E. Minarik (Eds.), Yeasts. Models in Science and Technics. Proc. Spec. Symp. on Yeasts, Smolenice. Slovak Academy of Sciences, Bratislava, pp. 375-387. Meyer, S.A., and F.R. Simione. 1978. Heterogeneity within the species Candida sake and Candida diddensii. Abstr. Annu. Meet. Am. Soc. Microbiol., p. 81. Meyer, S.A., and D. Yarrow. 1998. Validation of the names of three Candida species. Mycotaxon 66, 99-101. Meyer, S.A., K. Anderson, R.E. Brown, M.T. Smith, D. Yarrow, G. Mitchell and D.G. Ahearn. 1975. Physiological and DNA characterization of Candida maltosa, a hydrocarbon-utilizing yeast. Arch. Microbiol. 104, 225-231. Meyer, S.A., M.T. Smith and F.P. Simione. 1978. Systematics of

986

References

Hanseniaspora Zikes and Kloeckera Janke. Antonie van Leeuwenhoek 44, 79-96. Meyer, S.A., D.G. Ahearn and D. Yarrow. 1984. Candida Berkhout. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 585-844. Micales, J.A., M.R. Bonde and G.L. Peterson. 1986. The use of isozyme analysis in fungal taxonomy and genetics. Mycotaxon 27, 405-^49. Michod, R.E., and B.R. Levin. 1988. The Evolution of Sex. Sinauer Associates, Sunderland, MA, 342pp. Middelbeek, E.J., J.M.H. Hermans and C. Stumm. 1979. Production, purification and properties of a Pichia kluyveri killer toxin. Antonie van Leeuwenhoek 45, 437-450. Middelbeek, E.J., J.M.H. Hermans, C. Stumm and H.L. Muytjens. 1980a. High incidence of sensitivity to yeast killer toxins among Candida and Torulopsis isolates of human origin, Antimicrob. Agents Chemother. 17, 350-354. Middelbeek, E.J., J.G.W.H. Peters, C. Stumm and G.D. Vogel. 1980b. Properties of a Cryptococcus laurentii killer toxin and conditional killing effect of the toxin on Cryptococcus albidus. FEMS Microbiol. Lett. 9, 81-84. Middelbeek, E.J., C. Stumm and G.D. Vogel. 1980c. Effects of di Pichia kluyveri killer toxin on sensitive cells. Antonie van Leeuwenhoek 46, 205-220. Middelbeek, E.J., H.H.A.M. van der Laar, J.M.H. Hermans, C. Stumm and G.D. Vogel. 1980d. Physiological conditions affecting the stability of S. cereuisiae to a Pichia kluyveri killer toxin and energy requirement for toxin action. Antonie van Leeuwenhoek 46, 4 8 3 ^ 9 7 . Middelhoven, W.J., and E Spaaij. 1997. Rhodotorula cresolica sp. nov., a cresol-assimilating yeast species isolated from soil. Int. J. Syst. Bacteriol. 47, 324-327. Middelhoven, W.J., M.C. Hoogkamer-Te Niet and N.J.W. Kreger-van Rij. 1984. Trichosporon adeninovorans sp. nov., a yeast species utilizing adenine, xanthine, uric acid, putrescine and primary n-alkylamines as sole source of carbon, nitrogen and energy. Antonie van Leeuwenhoek 50, 369-378. Migula, W. 1900. System der Bakterien, Vol. 2. Fischer, Jena. Mikata, K., and I. Banno. 1985. Scanning electron microscopy of ascospores of Pichia membranaefaciens Hansen. Inst. Ferment, Osaka Res. Commun. 12, 70-77. Mikata, K., and I. Banno. 1987. Surface structure of ascospores of the genus Schizosaccharomyces. Inst. Ferment. Osaka Res, Commun, 13, 45-51, Mikata, K,, and I, Banno, 1989, Preservation of yeast cultures by L-drying: viability after 5 years of storage at 5°C. Inst. Ferment. Osaka Res. Commun. 14, 80-103, Mikata, K,, and Y Yamada, 1995, Ogataea kodamae, a new combination for a methanol-assimilating yeast species, Pichia kodamae van der Walt et Yarrow, Inst, Ferment. Osaka Res. Commun. 17, 99-101. Miller, G.R,, and S, Baharaeen, 1979, DNA base composition and photo-reactivation capabilities of six Hansenula species, Antonie van Leeuwenhoek 45, 365-368. Miller, M.W., and E.R. Barker. 1968. Pichia angophorae, sp. n. from the exudate of an Australian red gum tree, Antonie van Leeuwenhoek 34, 183-187, Miller, M,W,, and E,M, Mrak, 1953. Yeasts associated with dried-fruit beetles in figs. Appl. Microbiol, 1, 174-178. Miller, M.W, and H.J, Phafif, 1958, A comparative study of the apiculate yeasts, Mycopathol, Mycol, Appl, 10, 113-141. Miller, M.W, H.J. Phafif, M. Miranda, WB. Heed and W T Starmer. 1976a. Torulopsis sonorensis, a new species of the genus Torulopsis. Int. J, Syst, Bacteriol, 26, 88-91, Miller, M,W,, M, Yoneyama and M, Soneda. 1976b. Phaffia, a new yeast genus in the Deuteromycotina (Blastomycetes), Int, J, Syst. Bacteriol. 26, 286-291. Mims, C.W, and E.A. Richardson. 1987, An ultrastructural study of the asexual spores of the plant pathogenic fiingus Exobasidium vaccinii. Bot. Gaz, 148, 228-234, Mims, C W , E.A. Richardson and R.W Roberson, 1987, Ultrastructure

of basidium and basidiospore development in three species of the fiingus Exobasidium. Can. J. Bot. 65, 1236-1244. Mims, C.W, E.A. Richardson and J.W Kimbrough. 1990. Ultrastructure of ascospore delimitation in fi-eeze substituted samples of Ascodesmis nigricans (Pezizales). Protoplasma 156, 94-102. Min, K.H., and K.J. Kwon-Chung. 1986. The biochemical basis for the distinction between the two Cryptococcus neoformans varieties with CGB medium. Zbl. Bakt. Hyg, A 261, 4 7 1 ^ 8 0 , Minami, K., M, Yamamura, S, Shimizu, K. Ogawa and N, Sekine. 1978. A new methanol-assimilating, high productive, thermophilic yeast. J. Ferment. Technol. 56, 1-7, Minter, D,W, 1984. New concepts in the interpretation of conidiogenesis in deuteromycetes. Microbiol. Sci. 1, 86-89. Miranda, M., D.L, Holzschu, H,J, Phafif and W T Starmer, 1982, Pichia mexicana, a new heterothallic yeast from cereoid cacti in the North American Sonoran Desert, Int, J, Syst, Bacteriol, 32, 101-107, Misra, V C , and H,S, Randhawa, 1976, Sporobolomyces salmonicolor yar. fischeri, a new yeast. Arch, Microbiol, 108, 141-143. Mitchell, TG,, TJ. White and J.W Taylor. 1992. Comparison of 5.8S ribosomal DNA sequences among the basidiomycetous yeast genera Cystofilobasidium, Filobasidium and Filobasidiella. J. Med. Vet. Mycol. 30, 207-218. Mitchison, J.M. 1990. The fission yeast, Schizosaccharomyces pombe. BioEssays 12, 189-191, Mix, A.J, 1935, The life history of Taphrina deformans. Phytopathology 25, 41-66, Mix, A, J, 1949, A monograph of the genus Taphrina. Univ, Kansas Sci, Bull, 23, 1-167, [Reprinted: 1969, Bibliotheca Mycologica, Vol, 18, Cramer, Vaduz,] Mix, A,J, 1953, Differentiation of species of Taphrina in culture. Utilization of nitrogen compounds. Mycologia 45, 649-670. Mix, A.J, 1954. Differentiation of species of Taphrina in culture. Utilization of carbon compounds. Mycologia 46, 721-727. Miyaji, M., and K. Nishimura. 1985. Conidial ontogenesis of pathogenic black yeasts and their pathogenicity for mice. Proc. Indian Acad. Sci, Plant Sci, 94, 4 3 7 ^ 5 1 , Miyakawa, T, T. Tachikawa, R, Akada, E, Tsuchiya and S, Fukui. 1986, Involvement of Ca^^/calmodulin in sexual differentiation induced by mating pheromone rhodotorucine A in Rhodosporidium toruloides. J, Gen. Microbiol. 132, 1453-1457. Miyata, H., M. Miyata and B.F. Johnson. 1990. Pattern of end growth of the fission yeast Schizosaccharomyces pombe. Can. J. Microbiol. 36, 390-394. Mizutani, A., H. Hagiwara and K. Yanasisawa. 1990. A killer factor produced by the cellular slime mold PolysphondyHum pallidium. Arch. Microbiol. 153, 4 1 3 ^ 1 6 . Mochizuki, T, S. Tanaka and S. Watanabe. 1987. Ultrastructure of the mitotic apparatus in Cryptococcus neoformans. J. Med. Vet. Mycol. 25, 223-233. Moens, P.B. 1971. Fine structure of ascospore development in the yeast Saccharomyces cerevisiae. Can. J. Microbiol. 17, 507-510. Moens, P.B. 1974. Modification of sporulation in yeast strains with twospored asci {Saccharomyces, ascomycetes). J. Cell Sci. 16, 519-527. Moens, P.B,, and E. Rapport. 1971. Spindles, spindle plaques, and meiosis in the yeast Saccharomyces cerevisiae (Hansen). J. Cell Biol. 50, 344-361. Mogi, M. 1938a, Studies on the yeasts found in 'Miso', J. Agric. Chem. Soc. Japan 14, 951-988. In Japanese, Mogi, M, 1938b, Studies on the yeasts found in 'Miso' IV J. Agric, Chem, Soc. Japan 14, 1297-1324. In Japanese. Mogi, M. 1939. Yeasts from a soybean paste 'Miso'. Part III. Taxonomy, affinity and characteristic properties of the yeasts isolated from a soybean paste 'Miso'. J. Agric. Chem, Soc, Japan 15, 1221-1232, In Japanese, Mogi, M, 1942. Studies on the yeasts found in 'Miso'. J. Agric. Chem. Soc, Japan 18, 733-741, In Japanese. Molano, J., B. Bowers and E. Cabib. 1980. Distribution of chitin in the

References yeast cell wall - an ultrastructural and chemical study. J. Cell Biol. 85, 199-212. Molina, F.I., P. Shen and S.-C. Jong. 1993. Validation of the species concept in the genus Dekkera by restriction analysis of genes coding for rRNA. Int. J. Syst. Bacteriol. 43, 32-35. Moller, A. 1895. Protobasidiomyceten. In: A.F.W. Schimper (Ed.), Botanische Mitteilungen aus den Tropen, Vol. 8. Gustav Fischer, Jena, pp. 1-179. Monod, J., G. Cohen-Bazire and M. Cohn. 1951. Sur la biosynthese de la (3-galactosidase (lactase) chez Escherichia coli. La specificite de I'induction. Biochim. Biophys. Acta 7, 585-599. Montijn, R.C., J. Van Rinsum, FA. Van Schagen and KM. KHs. 1994. Glucomannoproteins in the cell wall of Saccharomyces cereuisiae contain a novel type of carbohydrate side chain. J. Biol. Chem. 269, 19338-19342. Montrocher, R. 1967. Quelques nouvelles especes et varietes du genre Candida (levures asporogenes). Rev. Mycol. 32, 69-92. Montrocher, R. 1980. Significance of immunoprecipitation in yeast taxonomy: antigenic analyses of some species within the genus Candida. Cell. Mol. Biol. 26, 293-302. Montrocher, R., and M.L. Claisse. 1984. Biochemical studies in the yeast genus Candida. Cell. Mol. Biol. 30, 291-301. Moor, H. 1967a. Endoplasmic reticulum as the initiator of bud formation in yeast {S. cereuisiae). Arch. Mikrobiol. 57, 135-146. Moor, H. 1967b. Der Feinbau der Mikrotubuli in Hefe nach Gefrieratzung. Protoplasma 64, 89-103. Moore, M. 1934. A new Geotrichum from bronchial and pulmonary infection, Geotrichum versiforme Moore n. sp. Ann. Mo. Bot. Gard. 21, 349-366. Moore, M. 1935. Head infection caused by a new Hemispora, H. coremiformis. Ann. Mo. Bot. Gard. 22, 317-332. Moore, R.T. 1965. The ultrastructure of fungal cells. In: G.C. Ainsworth and A.S. Sussman (Eds.), The Fungi, an Advanced Treatise, Vol. 1. Academic Press, New York, pp. 95-118. Moore, R.T. 1972. Ustomycota, a new division of higher fungi. Antonie van Leeuwenhoek 38, 567-584. Moore, R.T. 1974. Proposal for the recognition of super ranks. Taxon 23, 650-652. Moore, R.T. 1978. Taxonomic significance of septal ultrastructure with particular reference to the jelly fungi. Mycologia 70, 1007-1024. Moore, R.T. 1979. Septal ultrastructure in Sirobasidium magnum and its taxonomic implications. Antonie van Leeuwenhoek 45, 113-118. Moore, R.T. 1980. Taxonomic proposals for the classification of marine yeasts and other yeast-like fiingi including the smuts. Bot. Mar. 23, 361-373. Moore, R.T. 1985. The challenge of the dolipore/parenthesome septum. In: D. Moore, L.A. Casselton, D.A. Wood and J.A. Frankland (Eds.), Developmental Biology of Higher Fungi. Cambridge University Press, Cambridge, pp. 175-212. Moore, R.T. 1986. A note on Wallemia sebi. Antonie van Leeuwenhoek 52, 183-187. Moore, R.T. 1987a. Additions to the genus Vanrija. Bibl. Mycol. 108, 167-173. Moore, R.T. 1987b. Micromorphology of yeasts and yeast-like fiingi and its taxonomic implications. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 203-226 (Stud. Mycol. 30, 203-226). Moore, R.T. 1988a. A reconnaissance of the Division Ustomycota (Basidiomycotera). In: C. Moriarty (Ed.), Taxonomy - Putting Plants and Animals in Their Place. Royal Irish Academy, Dublin, pp. 63-91. Moore, R.T. 1988b. Taxonomic implications of septal ultrastructure in the Aphyllophorales. In: F. Wolkinger (Ed.), Internationales Aphyllophorales-Symposium Eisenstadt, 1982, Austrian Academy of Sciences, Graz, pp. 55-63. Moore, R.T. 1989a. Alicean taxonomy - small characters made large. Bot. J. Linnean Soc. 99, 59-79. Moore, R.T. 1989b. A closer look at wall morphology in budding basidiomycetous yeasts. Yeast 5, S305-S308.

987

Moore, R.T. 1990. The genus Lalaria gen. nov.: Taphrinales anamorphosum. Mycotaxon 38, 315-330. Moore, R.T. 1994. Third order morphology, TEM in the service of taxonomy. In: D.L. Hawkworth (Ed.), The Identification and Characterization of Pest Organisms. CAB International, Wallingford, pp. 249-259. Moore, R.T. 1996a. The dolipore/parenthesome spectrum in modem taxonomy. In: B. Sney, S. Jabali-Hare, S. Neate and G. Dijst (Eds.), Rhizoctonia Species: Taxonomy, Molecular Biology, Ecology, Pathology and Disease Control. Kluwer, Dordrecht, pp. 1-23. Moore, R.T. 1996b. An inventory of the phylum Ustomycota. Mycotaxon 59, 1-31. Moore, R.T. 1996c. Evolutionary trends in the fungi. In: D.McL. Roberts, P. Sharpe, G. Alderson and M. Collins (Eds.), Evolution of Microbial Life. Soc. Gen. Microbiol. Symp. 54, 205-224. Moore, R.T. 1996d. Evolutionary trends in the higher fiingi. In: R.A. Samson, J.A. Stalpers, D. van der Mei and A.H. Stouthamer (Eds.), Culture Collections to Improve the Quality of Life. Proc. 8th Int. Congr. Culture Collections (ICCC-8), Veldhoven, pp. 90-95. Moore, R.T. 1997. Evolutionary advances in the higher fiingi. Antonie van Leeuwenhoek (in press). Moore, R.T, and A.M. Flinn. 1991. Ubiquinone and urease values in Taphrina and Symbiotaphrina. Antonie van Leeuwenhoek 59, 4 5 ^ 7 . Moore, R.T, and N.J.W. Kreger-van Rij. 1972. Ultrastructure of Filobasidium Olive. Can. J. Microbiol. 18, 1949-1951. Morace, G., C. Archibusacci, M. Sestito and L. Polonelli. 1983/84. Strain differentiation of pathogenic yeasts by the killer system. Mycopathologia 84, 81-85. Morals, P.B., C.A. Rosa, S.A. Meyer, L.C. Mendon^a-Hagler and A.N. Hagler. 1995. Candida amapae, a new amino acid-requiring yeast from Amazonian fruit, Parahancornia amapa. J. Industr. Microbiol. 14, 531-535. Morenz, J. 1963. Geotrichum candidum Link. Taxonomic, Diagnose und medizinische Bedeutung. Mykol. Schr. Reihe 1, 1-79. Morenz, J. 1964. Taxonomische Untersuchungen zur Gattung Geotrichum Link. Mykol. Schr. Reihe 2, 33-64. Morikawa, Y, S. Takasawa, I. Masunaga and K. Takayama. 1985. Ethanol production from D-xylose and cellobiose by Kluyueromyces cellobiouorus. Biotechnol. Bioeng. 27, 509-513. Moriyon, I., and C. Ramirez. 1974. New species of yeasts isolated from an acid washed brown soil. Proc. 4th Int. Symp. Yeasts Vienna, Part I, 233-234. Mortimer, R.K., and J.R. Johnson. 1959. Life span of individual yeast cells. Nature 183, 1751-1752. Mortimer, R.K., and D. Schild. 1985. Genetic map o{ Saccharomyces cereuisiae, 9th edn. Microbiol. Rev. 49, 181-212. Moses, A., and G. Vianna. 1913. Sobre nova micose humana, causada por cogumelo ainda nao descrito: Proteomyces infestans. Mem. Inst. Oswaldo Cruz 5, 192-210. Motta, R. 1926. Nuova specie di Cryptococcus isolata dalla gola (Cryptococcus uuae Pollacci & Nannizzi). Att. R. Accad. Fisiocrit. Siena, IX, 17, 633-638. Moulin, G., and P. Galzy. 1981. Alcohol production from whey. In: M. Moo-Young and C.W. Robinson (Eds.), Proc. Sixth Int. Fermentation Symp. Pergamon Press, Toronto, pp. 181-187. Mrak, E.M., and L.S. McClung. 1940. Yeasts occurring on grapes and in grape products in California. J. Bacteriol. 40, 395-407. Mrak, E.M., H.J. Phaflf and H.C. Douglas. 1942a. A sporulation stock medium for yeasts and other fungi. Science 96, 432. Mrak, E.M., H.J. Phafif and R.H. Vaughn. 1942b. Yeasts occurring on dates. J. Bacteriol. 43, 689-700. Mu, C , H. Gao, Y Li, Z. Li, W. Tan and X. Zhang. 1979. A new species of yeast Pichia Hansen. Acta Microbiol. Sin. 19, 259-264. Mukerji, K.G. 1968. Eremothecium ashbyi. CMI Descr. Pathog. Fungi Bact. Set 19, No. 181. Miiller, B. 1989. Chemotaxonomische Untersuchungen an Basidiomyceten-Hefen, Dissertation. Universitat Tubingen.

988

References

MuUer, H.B., and J.L.F. Kock. 1986. Waltiozyma gen. nov. (Saccharomycetaceae), a new genus of the Endomycetales. S. Afr. J, Sci. 82, 491-492. Muller, H.B., J.L.F. Kock, P.J. Botes and P.M. Lategan. 1987. The cellular long-chain fatty acid composition of species representing the genus Pichia Hansen emend. Kurtzman. Syst. Appl. Microbiol. 9, 280-283. Mulvany, J.G. 1969. Membrane filter techniques in microbiology. In: J.R. Norris and D.W. Ribbons (Eds.), Methods in Microbiology, Vol. 1. Academic Press, New York, pp. 205-253. Murphy, R.W., J.W. Sites, D.G. Buth and C.H. Haufler. 1990. Isozyme electrophoresis. In: D.M. Hillis and C. Moritz (Eds.), Molecular Systematics. Sinauer Associates, Sunderland, MA, pp. 45-126. Nadson, G.A., and A.G. Konokotina. 1911. Guilliermondia, un nouveau genre de la famille des Saccharomycetes a copulation heterogamique. Bull. Jard. Imp. St. Petersbourg 11, 117-143. Nadson, G.A., and N.A. Krasil'nikov. 1928. Un nouveau genre d'Endomycetacees: Guilliermondella, nov. gen. Compt. Rend. 187, 307-309. Nadson, G.A., and N.A. Krasil'nikov. 1932. Stroenie, razvitie i rasoobrazovanie u Ridomitsetov (Endomycetaceae) [Structure, development and formation of stable races in the Endomycetaceae]. Dokl. Akad. Nauk SSSR 13, 313-322. Naganishi, H. 1917. Three new species of yeasts. Bot. Mag. Tokyo 31, 107-115. In Japanese. Naganishi, H. 1924. Mycological study of Manchurian kwass. Rep. Cent. Lab. S. Manchurian Railway Co. 10, 4 2 5 ^ 5 2 . In Japanese. Naganishi, H. 1928. The study of five new species of yeast. J. Zymol. 6, 1-12. In Japanese. Naganishi, H. 1933. On the heterogamic conjugation in Pichia alcoholophila var. naganishi Lodder. J. Ferment. Technol. 11, 88-92. In Japanese. Naganishi, H. 1941a. On the yeasts isolated from sediment of spoiled sake. J. Ferment. Technol. 19, 14-42. In Japanese. Naganishi, H. 1941b. Studies on the microorganisms in fermenting vinegar mash from rice. Rep. Sci. Assoc. Japan 15, 419-422. In Japanese. Nagasawa, T., J. Ono, T. Kudo and Y. Harada. 1975. An animal feed of high digestibility. US Patent 3 889006. Nagler, A., R. Bauer, M. Berbee, K. Vanky and F Oberwinkler. 1989. Light and electron microscopic studies of Schroeteria delastrina and S. poeltii. Mycologia 81, 884-895. Nagornaya, S.S., VP. Zharova and A.N. Kotlyar. 1989. Yeast antagonists in the normal microflora of the intestine tract in long-livers of Abkhazia. Mikrobiol. Zh. 51, 34-39. In Russian. Nagy, A., N. Garamszegi, C. Vagvolgyi and L. Ferenczy. 1994. Electrophoretic karyotypes of Phaffia rhodozyma strains. FEMS Microbiol. Lett. 123, 315-318. Nakajima, T., K. Aoyama, E. Ichishima and K. Matsuda. 1989. Structural analysis of j3-glucans from a killer toxin sensitive yeast, Saccharomyces cerevisiae, and a killer-resistant mutant. Agric. Biol. Chem. 53, 1983-1985. Nakase, T. 1971a. New species of yeasts found in Japan. J. Gen. Appl. Microbiol. 17, 409-419. Nakase, T 1971b. Four new yeasts found in Japan. J. Gen. Appl. Microbiol. 17, 469-478. Nakase, T. 1971c. New species of yeasts resembling Candida krusei (Cast.) Berkhout. J. Gen. Appl. Microbiol. 17, 383-398. Nakase, T. 1972a. A comparative study on Pichia dispora and Pichia saitoi. J. Gen. Appl. Microbiol. 18, 377-382. Nakase, T. 1972b. Significance of DNA base composition in the classification of yeasts and yeast-like fiingi. In: G. Terui (Ed.), Fermentation Technology Today, Proc. IV Int. Ferment. Symp., Soc. Ferment. Technol., Osaka, Japan, pp. 785-791. Nakase, T. 1975. Three new asporogenous yeasts found in industrial waste water. Antonie van Leeuwenhoek 41, 201-210. Nakase, T. 1987. Isolation and maintenance of ballistospore-forming yeasts. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.),

The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 375-387 (Stud. Mycol. 30, 375-387). Nakase, T. 1989. Classification of ballistosporous yeasts. Yeast 5, S 5 1 1 S516. Nakase, T, and T. Boekhout. 1988. Emendation of the genus Bensingtonia Ingold. J. Gen. Appl. Microbiol. 34, 4 3 3 ^ 3 7 . Nakase, T , and M. Itoh. 1988. Two new combinations of ballistospore-forming yeasts: Sporobolomyces tsugae comb. nov. and Sporobolomyces salicinus comb. nov. J, Gen. Appl. Microbiol. 34, 499-502. Nakase, T, and K. Komagata. 1966. New yeasts, Endomycopsis muscicola and Pichia zaruensis. J. Gen. Appl. Microbiol. 12, 347352. Nakase, T, and K. Komagata. 1968a. Taxonomic significance of base composition of yeast DNA. J. Gen. Appl. Microbiol. 14, 345-357. Nakase, T, and K. Komagata. 1968b. Taxonomic significance of base composition of yeast DNA. Yeast News Letter 17, 4-6. Nakase, T, and K. Komagata. 1969. DNA base composition of the genus Hansenula. J. Gen. Appl. Microbiol. 15, 85-95. Nakase, T, and K. Komagata. 1970a. Significance of DNA base composition in the classification of the yeast genera Hanseniaspora and Kloeckera. J. Gen. Appl. Microbiol. 16, 241-250. Nakase, T, and K. Komagata. 1970b. Significance of DNA base composition in the classification of the yeast genus Pichia. J. Gen. Appl. Microbiol. 16,511-521. Nakase, T, and K. Komagata. 1971a. Significance of DNA base composition in the classification of the yeast genus Debaryomyces. J. Gen. Appl. Microbiol. 17, 43-50. Nakase, T, and K. Komagata. 1971b. Further investigation on the DNA base composition of the genus Hansenula. J. Gen. Appl. Microbiol. 17, 77-84. Nakase, T., and K. Komagata. 1971c. Significance of DNA base composition in the classification of the yeast genera Cryptococcus and Rhodotorula. J. Gen. Appl. Microbiol. 17, 121-130. Nakase, T, and K. Komagata. 197Id. Significance of DNA base composition in the classification of the yeast genus Torulopsis. J. Gen. Appl. Microbiol. 17, 161-166. Nakase, T., and K. Komagata. 1971e. Significance of DNA base composition in the classification of the yeast genus Saccharomyces. J. Gen. Appl. Microbiol. 17, 227-238. Nakase, T, and K. Komagata. 197If Significance of DNA base composition in the classification of the yeast genus Candida. J. Gen. Appl. Microbiol. 17, 259-279. Nakase, T, and K. Komagata. 1971g. DNA base composition of some species of yeasts and yeast-like fungi. J. Gen. Appl. Microbiol. 17, 363-369. Nakase, T , and M. Suzuki. 1985a. Taxonomic studies on Debaryomyces hansenii (Zopf) Lodder et Kreger-van Rij and related species. I. Chemotaxonomic investigations. J. Gen. Appl. Microbiol. 31, 4 9 69. Nakase, T, and M. Suzuki. 1985b. Taxonomic studies on Debaryomyces hansenii (Zopf) Lodder et Kreger-van Rij and related species. II. Practical discrimination and nomenclature. J. Gen. Appl. Microbiol. 31, 71-86. Nakase, T, and M. Suzuki. 1985c. Ballistospore-forming yeasts found on the surface of the Japanese rice plant, Oryza satiua L. J. Gen. Appl. Microbiol. 31,457-474. Nakase, T, and M. Suzuki. 1985d. Candida tsuchiyae, nov. sp., isolated from moss collected in Japan. J. Gen. Appl. Microbiol. 31, 507-512. Nakase, T, and M. Suzuki. 1986a. Bullera derxii sp. nov, and Bullera pseudoalba sp. nov. isolated from dead leaves of Oryza satiua and Miscanthus sinensis. J. Gen. Appl. Microbiol. 32, 125-135. Nakase, T, and M. Suzuki. 1986b. Bullera intermedia sp. nov. and Sporobolomyces oryzicola sp. nov. isolated from dead leaves of Oryza satiua. J. Gen. Appl. Microbiol. 32, 149-155. Nakase, T, and M. Suzuki. 1986c. Bullera megalospora, a new species of yeast forming large ballistospores isolated from dead leaves of

References Oryza sativa, Miscanthus sinensis and Sasa sp. in Japan. J. Gen. Appl. Microbiol. 32, 225-240. Nakase, T, and M. Suzuki. 1986d. The ubiquinone system in strains of species in the balHstospore-forming yeast genera Sporidiobolus, Sporobolomyces and Bullera. J. Gen. Appl. Microbiol. 32, 251-258. Nakase, T., and M. Suzuki. 1987a. Sporobolomyces naganoensis, a new species of ballistosporous yeast equipped with ubiquinone-9, isolated from a dead leaf of Sasa sp. in Japan. Trans. Mycol. Soc. Japan 28, 1-8. Nakase, T, and M. Suzuki. 1987b. Sporobolomyces griseoflauus and Sporobolomyces sasicola, two new species of ballistosporous yeasts isolated from dead leaves of Sasa sp. in Japan. J. Gen. Appl. Microbiol. 33, 167-175. Nakase, T , and M. Suzuki. 1987c. Studies on ballistospore-forming yeasts from the dead leaves of Miscanthus sinensis with descriptions of the new species Sporobolomyces miscanthii, Sporobolomyces subroseus and Sporobolomyces weijmanii. J. Gen. Appl. Microbiol. 33, 177-196. Nakase, T, and M. Suzuki. 1987d. Bullera variabilis, a new species of yeast with uniquely-shaped ballistospores isolated from various plant materials. J. Gen. Appl. Microbiol. 33, 343-354. Nakase, T, and M. Suzuki. 1987e. Sporobolomyces inositophilus, a new species of ballistosporous yeast isolated from a dead leaf of Sasa sp. in Japan. Antonie van Leeuwenhoek 53, 245-251. Nakase, T, and M. Suzuki. 1988. Sporobolomyces yuccicola, a new species of ballistosporous yeast equipped with ubiquinone-9. Antonie van Leeuwenhoek 54, 47-55. Nakase, T, and A. Takematsu. 1992. Udeniomyces, a new ballistosporous anamorphic yeast genus in the Cryptococcaceae proposed for three Bullera species which produce large bilaterally symmetrical ballistospores. FEMS Microbiol. Lett. 100, 497-502. Nakase, T., Y. Fukazawa and T. Tsuchiya. 1972. A comparative study of two forms of Candida tropicalis (Cast.) Berkhout. J. Gen. Appl. Microbiol, 18, 349-363. Nakase, T., K. Komagata and Y. Fukazawa. 1976. Candida pseudointermedia sp. nov., isolated from "Kamaboko", a traditional fish-paste product in Japan. J. Gen. Appl. Microbiol. 22, 177-182. Nakase, T., K. Komagata and S. Konishi. 1977. Yeasts found in the extraction process of water-soluble substances of defatted soybean flakes. Trans. Mycol. Soc. Japan 18, 186-196. In Japanese. Nakase, T , K. Komagata and Y. Fukazawa. 1978. Candida pararugosa, a new species of asporogenous yeast. J. Gen. Appl. Microbiol. 24, 17-25. Nakase, T., K. Komagata and Y Fukazawa. 1979. A comparative taxonomic study on two forms of Candida parapsilosis (Ashford) Langeron et Talice. J. Gen. Appl. Microbiol. 25, 375-386. Nakase, T, M. Itoh and M. Suzuki. 1987a. Sporobolomyces falcatus sp. nov., isolated from a dead leaf of Miscanthus sinensis in Japan. Trans. Mycol. Soc. Japan 28, 295-301. Nakase, T., M. Suzuki and M. Itoh. 1987b. Sporobolomyces yamatoanus, a new species of ballistosporous yeast equipped with ubiquinone-9 isolated from dead leaves of various plants in Japan. J. Gen. Appl. Microbiol. 33, 4 4 5 ^ 5 4 . Nakase, T., M. Itoh, M. Suzuki, K. Komagata and T. Kodama. 1988a. Candida palmioleophila sp. nov, a yeast capable of assimilating crude palm oil, formerly identified as Torulopsis Candida. J. Gen. Appl. Microbiol. 34, 4 9 3 ^ 9 8 . Nakase, T., M. Itoh, A. Takematsu and K. Komagata. 1988b. Candida tanzawaensis, a new species of yeast isolated from moss collected in Japan. Trans. Mycol. Soc. Japan 29, 331-338. Nakase, T., M. Itoh and J. Sugiyama. 1989a. Bensingtonia ingoldii sp. nov, a ballistospore-forming yeast isolated from Knightia excelsa collected in New Zealand. J. Gen. Appl. Microbiol. 35, 53-58. Nakase, T., G. Okada, J. Sugiyama, M. Itoh and M. Suzuki. 1989b. Ballistosporomyces, a new ballistospore-forming anamorphic yeast genus. J. Gen. Appl. Microbiol. 35, 289-309. Nakase, T, M. Itoh, A. Takematsu and R.J. Bandoni. 1990a. Bullera

989

miyagiana, a new species of ballistospore-forming yeast isolated from Abies firma collected in Japan. J. Gen. Appl. Microbiol. 36, 33-39. Nakase, T, M. Itoh, M. Suzuki and R.J. Bandoni. 1990b. Sporobolomyces lactophilus sp. nov, a ballistosporous yeast isolated from Abies firma collected in Japan. Trans. Mycol. Soc. Japan 36, 159-167. Nakase, T, A. Takematsu, M. Itoh and T. Boekhout. 1990c. Conspecificity of Bullera derxii, Bullera sinensis and Bullera alba var. lactis. J. Gen. Appl. Microbiol. 36, 209-213. Nakase, T, M. Hamamoto and J. Sugiyama. 1991a. Recent progress in the systematics of basidiomycetous yeasts. Japan. J. Med. Mycol. 32(Suppl.), 21-30. Nakase, T, M. Itoh, A. Takematsu, K. Mikata, I. Banno and Y Yamada. 1991b. Kockouaella, a new ballistospore-forming anamorphic yeast genus. J. Gen. Appl. Microbiol. 37, 175-197. Nakase, T, A. Takematsu and Y Yamada. 1993. Molecular approaches to the taxonomy of ballistosporus yeasts based on the analysis of the partial nucleotide sequences of 18S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 39, 107-134. Nakase, T, M. Suzuki, S.-O. Suh and M. Takashima, 1994a. Reclassification of Candida magnoliae, a chemotaxonomic investigation. Abstr. Int. Union Microbiol. Soc. lUMS Congr., 1994, p. 327. Nakase, T., M. Suzuki, M. Takashima, Y Miyakawa, K. Kagaya, Y Fukazawa and K. Komagata. 1994b. Candida sojae, a new species of yeast isolated from an extraction process of water-soluble substances of defatted soybean flakes. J. Gen. Appl. Microbiol. 40, 161-169. Nakase, T, M. Suzuki, M. Takashima, M. Hamamoto, T. Hatano and S. Fukui. 1994c. A taxonomic study on cellulolytic yeast and yeastlike microorganisms isolated in Japan. I. Ascomycetous yeast genera Candida and Williopsis and a yeast-like genus Prototheca. J. Gen. Appl. Microbiol. 40, 519-531. Nakazawa, R. 1909. Zwei Saccharomyceten aus Sakehefe. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 22, 529-540. Nakazawa, R. 1914. The fission yeasts of cane-sugar molasses. Taiwan Sotokufti Kenkyujo Hokaku 111, 113-138. In Japanese. Nakazawa, R. 1919. Rep. Taiwan Government Lab. 7. In Japanese. Nakazawa, R. 1933. Melasse vergarende Hefe (Sammlungs Nr. 396 Forschungsinstitut der Regierung Formosa) Saccharomyces fi)rmosensis nov sp. J. Agric. Chem. Soc. 102, 285-291. Nakazawa, R., and M. Simo. 1936. Two new yeasts. Saccharomyces robustus nov. sp. and Saccharomyces praecisus nov. sp. J. Agric. Chem. Soc. Japan 12, 356-366. In Japanese. Nannizzi, A. 1934. Repertorio sistematico dei miceti dell'uomo e degli animali. In: G. PoUacci (Ed.), Trattato di Micopathologia umana. Vol. IV Poligrafia Meimi, Siena. Nasmyth, K. 1996. Viewpoint: putting the cell cycle in order. Science 274, 1643-1645. Nasuno, S. 1971. Polyacrylamide gel disc electrophoresis of alkaline proteinases from Aspergillus species. Agric. Biol. Chem. 35, 11471150. Naumov, G.I. 1985. Comparative genetics of yeasts. XXIII. Unusual inheritance of toxin production in Saccharomyces paradoxus Batschinskaya. Genetika 21, 1794-1798. In Russian. Naumov, G.I. 1986a. Genosystematics of yeasts of the genus Zygofabospora Kudriavzev emend. G. Naumov. Mol. Genet. Microbiol. Virol. (USSR) 5, 10-13. Naumov, G.I. 1986b. Genetic differentiation and ecology of the yeast Saccharomyces. Proc. Acad. Sci. USSR Bot. Soc. DKBSBT: 289/290, 213-216. Naumov, G.I. 1987a. Developments in the genosystematics of the yeast genera Williopsis Zender and Zygowilliopsis Kudriavzev. Mol. Genet. Mikrobiol. Virusol. 2, 3-7. In Russian. Naumov, G.I. 1987b. Nomenclature of a yeast genus, Zygofabospora Kudriavzev emend. G. Naumov. Mycol. Phytopathol. (USSR) 21, 134139. Naumov, G.I. 1987c. Genetic basis for clarification and identification of the ascomycetous yeasts. In: G.S. de Hoog, M.Th. Smith and

990

References

A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Nieuwdorp, RJ., P Bos and W.C. Slooff. 1974. Classification of Lipomyces. Antonie van Leeuwenhoek 40, 241-254. Elsevier, Amsterdam, pp. 469-475 (Stud. Mycol. 30, 469^75). Naumov, G.I. 1988. Identification of yeast species in the genus Nigam, J.N., A. Margaritis and M.A. Lachance. 1985. Aerobic fermentation of D-xylose to ethanol by Clauispora sp. Appl. Environ. Zygofabospora Kudriavzev emend. G. Naumov. Microbiology (USSR) Microbiol. 50, 763-766. 57, 114-118. Naumov, G.I., and T.A. Nikonenko. 1988. East Asia is the probable Nilsson-Tillgren, T., T.C. Gjermansen, M.C. Kielland-Brandt, J.G.L. Peoriginal habitat of the cultured yeast Saccharomyces cereuisiae. Akad. tersen and S. Holmberg. 1981. Genetic differences between S. carlsbergensis and S. cereuisiae. Analysis of chromosome III by Nauk SSSR Ser. Biol. Nauk, 0(3), 97-101. single chromosome transfer. Carlsberg Res. Commun. 46, 65-76. Naumov, G.I., M.M. Vustin and T.I. Naumova. 1981. Zygowilliopsis Nilsson-Tillgren, T, M.C. Kielland-Brandt, S. Holmberg, J.G.L. Petersen californica, Williopsis saturnus, W. beijerinckii comb, nov., W. mrakii and T.C. Gjermansen. 1983. Is lager yeast a species hybrid? Utilization comb, nov Dokl. Akad. Nauk SSSR 259, 718-722. In Russian. of intrinsic genetic variation in breeding. In: Y Ikeda and T. Beppu Naumov, G.I., M.M. Vustin, I.R Bab'eva and I.S. Reshetova. 1985a. (Eds.), Genetics of Industrial Microorganisms. Kodanska Ltd., Tokyo, Additions to the genotaxonomy of Williopsis and Zygowilliopsis yeast pp. 143-147. genera. Mikrobiologiya 54, 239-244. In Russian. Naumov, G.I., M.M. Vustin and I.R Bab'eva. 1985b. Geneticheskaya Nilsson-Tillgren, T, T.C. Gjermansen, S. Holmberg and J.G.L. Petersen. 1986. Analysis of chromosome V and the ILV 1 gene from Saccharoidentifikatsiya dvukh vidow drozhzhepodobnykh gribov v rode myces carls bergensis. Carlsberg Res. Commun. 51, 309-326. Arthroascus von Arx [Genetic identification of two species of the genus Arthroascus von Arx]. Dokl. Akad. Nauk SSSR 281, 1463- Nino, F.L. 1930. Onixis y perionixis de origen blastomicosico (estudio clinico y micologico). Bol. Inst. Clin. Quirurg. 5, 270-281. 1465. Naumov, G.I., L.V Tyurina, N.I. Bur'yan and T.K. Skorikova. 1986. Nino, F.L. 1933. Nueva observacion de tricopatia piedrica por "Piedraia Hortai" en la Republica Argentina. Prensa Med. Arg. 20, 1661-1671, Toxin production and composition of industrial population of the yeast 1699-1713. Saccharomyces cereuisiae. Biotechnologiya N 4, 28-34. In Russian. Nealson, K.H., and E.D. Garber. 1967. An electrophoretic survey of Nino, F.L. 1934. Blastomycosis humana generalizada por Cryptococcus (n. sp.) Buenos Aires (cited by Lodder and Kreger-van Rij 1952). esterase, phosphatases, and leucine amino-peptidases in mycelial extracts of species of Aspergillus. Mycologia 59, 330-336. Nino, F.L. 1938. Contribucion al estudio de las blastomicosis en la Nechitsch, A. 1904. Sur les ferments de deux levains de ITnde, le Mucor Republica Argentina. Bol. Inst. Clin. Quirurg. Univ. Buenos Aires Praini et le Dematium Chodati. Inst. Bot. Univ. Geneve 5, 1. 14, 591-1042. Negroni, R 1929. Sur une novelle espece de Saccharomyces, S. annulatus Niiio, F.L., and A. Puglisi. 1927. Moniliasis bucal. Su estudio clinico y micologico. Sem. Med. 34, 222-229. n. sp. Ann. Parasitol. Hum. Comp. 7, 303-308. Negroni, R, and R. Blaisten. 1941. Estudio morfologico yfisiologicode Nishida, H., and J. Sugiyama. 1993. Phylogenetic relationships among Taphrina, Saitoella, and other higher fiingi. Mol. Biol. Evol. 10, 431una nueva especie de Prototheca: Prototheca ciferrii n. sp., aislada de 436. epidermis de papa. Mycopathologia 3, 94-104. Negroni, R, and I. Fischer. 1940. Flora micologica (Eumycetes) de las Nishida, H., and J. Sugiyama. 1994. Archiascomycetes: detection of a major new lineage within the Ascomycota. Mycoscience 35, 361-366. material fecales. Rev. Argent. Dermat. 24, 135-154. Negroni, R, and I. Fischer. 1941. Contribucion al conocimiento de la Nishida, H., K. Ando, Y Ando, A. Hirata and J. Sugiyama. 1995. Mixia osmundae: transfer from the Ascomycota to the Basidiomycota based flora micologica (microfitos) del delta de Parana. Rev. Inst. Bacteriol. on evidence from molecules and morphology. Can. J. Bot. 73, S660Dep. Higiene 10, 334-342. S666. Nehrbass, U, H. Kern, A. Mutvei, H. Horstmann, B. Marshallsay and Nishimura, T. 1910. Naikokuzei-ishu, Japan No. 45, 47. In Japanese. E.G. Hurt. 1990. NSPl: a yeast nuclear pore protein localized at Nishiura, Y, K. Nakagawa-Yoshida, M. Suga, T. Shinoda, E. Gueho and the nuclear pores exerts its essential function by its carboxy-terminal M. Ando. 1996. Assignment and serotyping of Trichosporon species: domain. Cell 61, 979-989. the causative agents of summer-type hypersensitivity pneumonitis. Nel, E.E., and J.P. van der Walt. 1968. Torulopsis humilis, sp. n. J. Med. Vet. Mycol. 35, 45-52. Mycopathol. Mycol. Appl. 36, 94-96. Neveu-Lemaire, M. 1912. Recherche des Saccharomycetes et des Nishiwaki, Y 1910. Isolation of a red, spore-forming yeast. J. Industr. Chem. Japan 13, 1071-1075. In Japanese. Blastomycetes dans I'organisme de leur bote. In: Parasitologic des Nishiwaki, Y 1929. Uber cine neue Nachreif Hefe in dem dunklen Animaux Domestiques. J. Lamarre & Cie., Paris, p. 60. Bodensediment des japanischen Sake und iiber eine neue Hefegattung Neveu-Lemaire, M. 1921. Precis de Parasitologic Humaine. Ed. 5. Zygosaccharomycodes. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 78, Lamarre, Paris. 403-410. Newell, S.Y., and J.W. Fell. 1970. The perfect form of a marine-occurring yeast of the genus Rhodotorula. Mycologia 62, 272-281. Noda, H., and K. Kodama. 1996. Phylogenetic position of yeastlike Newell, S.Y., and I.L. Hunter. 1970. Rhodosporidium diobovatum endosymbionts of anobiid beetles. Appl. Environ. Microbiol. 62, 162167. sp. n., the perfect form of an asporogenous yeast {Rhodotorula sp.). Noda, H., N. Nakashima and M. Koizumi. 1995. Phylogenetic position of J. Bacteriol. 104, 503-508. Nickerson, W.J. 1943. Zygosaccharomyces acidifaciens: a new acetifying yeast-like symbiotes of rice planthoppers based on partial 18S rDNA sequences. Insect Biochem. Mol. Biol. 25, 639-646. yeast. Mycologia 35, 66-78. Nickerson, W.J. 1944a. Studies onfilm-formingyeasts. Acid production Nomoto, H., K. Kitano, T. Shimazaki, K. Kodama and S. Hara. 1984. Distribution of killer yeasts in the genus Hansenula. Agric. Biol. by Zygopichia and Zygohansenula. Mycologia 36, 224-233. Chem. 48, 807-809. Nickerson, W.J. 1944b. Studies in the genus Zygosaccharomyces I. Transfer of pellicle-forming yeasts to Zygopichia. Farlowia 1, 469- Nosik, N.N., F.L Ershov, O.V Nikolaeva, L.A. Bukata, G.F. Nesterova, E.V Tuchinskaya and VS. Milovatski. 1984. Interferon-inducing and 481. antiviral activity of yeast dsRNAs. Vopr. Virusol. 29, 718-720. Nickerson, W.J., and W.R. Carroll. 1945. On the metabolism of Zygosaccharomyces. Arch. Biochem. 7, 257-271. Novak, E.K. 1964. Candida soosii nov. sp., a new yeast related to Niehaus, C.J.G. 1932. Untersuchungen iiber Apiculatushefen. Zentralbl. Candida requinyii Szep et Novak 1963. Acta Microbiol. Acad. Sci. Hung. 11, 51-54. Bakteriol Parasitenkd., Abt. II, 86, 97-150. Nielsen, H., J. Stenderup, B. Bruun and J. Ladefoged. 1990. Candida Novak, E.K., and I. Vitez. 1964. Mycological investigations on clinical materials. II. Description of new yeasts. Zentralbl. Bakteriol. norvegensis peritonitis and invasive disease in a patient on continuous Parasitenkd., Abt. I, Orig. 193, 127-133. ambulatory peritoneal dialysis. J. Clin. Microbiol. 28, 1664-1665.

References Novak, E.K., and C. Voros-Felkai. 1962. Rhodotorula slooffii n. sp. Acta Microbiol. Acad. Sci. Hung. 9, 261-263. Novak, E.K., and J. Zsolt. 1961. A new system proposed for yeasts. Acta Bot. Acad. Sci. Hung. 7, 93-145. Nowakowska-Waszczuk, A., and M. Pietka. 1983. Taxonomic study of four yeast strains assimilating methanol. Acta Microbiol. Pol. 32, 7 3 85. Nurudeen, T.A., and D.G. Ahearn. 1979. Regulation of melanin production by Cryptococcus neoformans. J. Clin. Microbiol. 10, 724729. Nyland, G. 1949. Studies on some unusual Heterobasidiomycetes from Washington State. Mycologia 41, 686-701. Nyland, G. 1950. The genus Tilletiopsis. Mycologia 42, 4 8 7 ^ 9 6 . Oberwinkler, F. 1985. Anmerkungen zur Evolution und Systematik der Basidiomyceten. Bot. Jahrb. Syst. 107, 541-580. Oberwinkler, F. 1987. Heterobasidiomycetes with ontogenetic yeaststages - systematic and phylogenetic aspects. In: G.S, de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 61-74 (Stud. Mycol. 30, 61-74). Oberwinkler, F. 1990. New genera of auricularioid heterobasidiomycetes. Rep. Tottori Mycol. Inst. 28, 113-127. Oberwinkler, R, and R.J. Bandoni. 1981. Tetragoniomyces gen. nov. and Tetragoniomycetaceae fam. nov. (Tremellales). Can. J. Bot. 59, 10341040. Oberwinkler, F , and R.J. Bandoni. 1982a. Carcinomycetaceae: a new family in the heterobasidiomycetes. Nordic J. Bot. 2, 502-516. Oberwinkler, F., and R.J. Bandoni. 1982b. A taxonomic survey of the gasteroid, auricularioid heterobasidiomycetes. Can. J. Bot. 60, 17261750. Oberwinkler, R, and R.J. Bandoni. 1982c. Atractogloea: a new genus in the Hoehnelomycetaceae (heterobasidiomycetes). Mycologia 74, 634639. Oberwinkler, R, and R.J. Bandoni. 1983. Trimorphomyces: a new genus in the Tremellaceae. Syst. Appl. Microbiol. 4, 105-113. Oberwinkler, R, and R.J. Bandoni. 1984. Herpobasidium and allied genera. Trans. Br. Mycol. Soc. 83, 639-658. Oberwinkler, R, and R. Bauer. 1989. The systematics of gasteroid, auricularioid Heterobasidiomycetes. Sydowia 41, 224-256. Oberwinkler, F , R.J. Bandoni, P. Blanz, G. Demi and L. KisimovaHorovitz. 1982. Graphiolales: basidiomycetes parasitic on palms. Plant Syst. Evol. 140, 251-277. Oberwinkler, R, R.J. Bandoni, P. Blanz and L. Kisimova-Horovitz. 1983. Cystofilobasidium: a new genus in the Filobasidiaceae. Syst. Appl. Microbiol. 4, 114-122. Oberwinkler, F , R.J. Bandoni, R. Bauer, G. Demi and L. KisimovaHorovitz. 1984. The life-history of Christianseniapallida, SL dimorphic mycoparasitic heterobasidiomycete. Mycologia 76, 9-22. Oberwinkler, F , R. Bauer and R.J. Bandoni. 1990a. Colacogloea: a new genus in the auricularioid Heterobasidiomycetes. Can. J. Bot. 68,2531-2536. Oberwinkler, F, R. Bauer and R.J. Bandoni. 1990b. Heterogastridiales: a new order of basidiomycetes. Mycologia 82, 48-58. Oberwinkler, F , R. Bauer and J. Schneller. 1990c. Phragmoxenidium mycophilum sp. nov, an unusual mycoparasitic heterobasidiomycete. Syst. Appl. Microbiol. 13, 186-191. Ochman, H., and A.C. Wilson. 1987. Evolution in bacteria: evidence for a universal substitution rate in cellular genomes. J. Mol. Evol. 26, 74-86. O'Connor, R.M., C.R. McArthur and G.D. Clark-Walker. 1975. Closedcircular DNA from mitochondrial-enriched fractions of four petitenegative yeasts. Eur. J. Biochem. 53, 137-144. O'Connor, R.M., C.R. McArthur and G.D. Clark-Walker. 1976. Respiratory-deficient mutants of Torulopsis glabrata, a yeast with circular mitochondrial deoxyribonucleic acid of 6 |im. J. Bacteriol. 126, 959-968. O'Donnell, K.L. 1992. Ultrastructure of meiosis and the spindle pole

991

body cycle in freeze-substituted basidia of the smut fungi Ustilago maydis and Ustilago auenae. Can. J. Bot. 70, 629-638. O'Donnell, K.L., and D.J. McLaughlin. 1984a. Ultrastructure of meiosis in Ustilago maydis. Mycologia 76, 468-485. O'Donnell, K.L., and D.J. McLaughlin. 1984b. Postmeiotic mitosis, basidiospore development, and septation in Ustilago maydis. Mycologia 76, 486-502. Ogata, K., H. Nishikawa and M. Ohsugi. 1969. A yeast capable of utilizing methanol. Agric. Biol. Chem. 33, 1519-1520. Ogletree, FR, A.T. Abdelal and D.G. Ahearn. 1978. Germ-tube formation by atypical strains of Candida albicans. Antonie van Leeuwenhoek 44, 15-24. Ohara, Y., and H. Nonomura. 1954a. Yeasts occurring in a mash and koji of Tamari-soja. Part 1. Pichia mogii nov. sp. J. Agric. Chem. Soc. Japan 28, 122-125. Ohara, Y, and H. Nonomura. 1954b. A taxonomic study on the yeasts isolated in Japan. Part 1. Genus Pichia Hansen. J. Agric. Chem. Soc. Japan 28, 160-165. Ohara, Y, and H. Nonomura. 1954c. Yeasts occurring in a mash and koji of tamari-soya. Part 2. A taxonomic study on the four strains of Cryptococcaceae. J. Agr. Chem. Soc. Japan 28, 717-721. In Japanese. Ohara, Y, and H. Nonomura. 1954d. Yeasts occurring in a mash and koji of Tamari-soya. Part 4. On the four strains including Debaryomyces tamarii nov. spec. J. Agric. Chem. Soc. Japan 28, 837-840. Ohara, Y, and H. Nonomura. 1954e. Yeasts occurring in a mash and koji of Tamari-soya. Part 5. On the Trichosporon cutaneum and its new variety. J. Agric. Chem. Soc. Japan 28, 886-889. Ohara, Y, H. Nonomura and H. Yunome. 1960a. Dynamic aspects of yeast flora during vinous fermentation. Part 5. Bull. Res. Inst. Ferment. Yamanishi Univ. 7, 3-5. Ohara, Y, H. Nonomura and H. Yunome. 1960b. New species and varieties of Cryptococcoideae from grape musts. J. Agric. Chem. Soc. Japan 34, 709-711. Ohara, Y, H. Nonomura and T. Yamazaki. 1964. Torulopsis uinacea sp. nov, a new yeast isolated from grape musts. J. Gen. Appl. Microbiol. 10, 77-78. Ohara, Y, H. Nonomura and T. Yamazaki. 1965. Candida incommunis sp. nov, a new yeast isolated from grape must. J. Gen. Appl. Microbiol. 11,273-275. Oho, O. 1919. Uber das sogenannte "Inkin". Kyoto Ingaku Zasshi 16, 7-21. Ohta, Y, Y Tsukada and T. Sugimori. 1984. Production, purification and characterization of HYI, an anti-yeast substance, produced by Hansenula saturnus. Agric. Biol. Chem. 48, 903-908. Okabe, Y 1929. Studien iiber den Soorpilz. I. Mitteilung: Bakteriologische Eigenschaften und systematische Stellung des Soorpilzes. Zentralbl. Bakteriol. Parasitenkd. Infektionskr., Erste Abteilung, 111, 181-187. Okagbue, R.N., and M.J. Lewis. 1983. Mixed culture of Bacillus circulans WL-12 and Phaffia rhodozyma on different carbon sources: yeast-wall lytic enzyme production and extractability of astaxanthin. Biotechnol. Lett. 5, 731-736. Oki, T , K. Kouno, A. Kitai and A. Ozaki. 1972. New yeast capable of assimilating methanol. J. Gen. Appl. Microbiol. 18, 295-305. Okuda, T., A. Ikeda and H. Maruyama. 1981. Holtermannia corniformis: physiological characterization of the yeast state and mating. Trans. Mycol. Soc. Japan 22, 153-163. Okunishi, M., K. Yamada and K. Komagata. 1979. Electrophoretic comparison of enzymes from basidiomycetes in different stages of development. J. Gen. Appl. Microbiol. 25, 329-334. Okunuki, K. 1931. Beitrage zur Kenntnis der rosafarbigen Sprosspilze. Japan. J. Bot. 5, 283-322. O'Leary, VS., R. Green, B.C. Sullivan and VH. Holsinger. 1977. Alcohol production by selected yeast strains in lactase-hydrolyzed acid whey. Biotechnol. Bioeng. 19, 1019-1035. Olive, L.S. 1947. Notes on Tremellales from Georgia. Mycologia 39, 90-108.

992

References

Olive, L.S. 1950. A new genus of the Tremellales from Louisiana. Mycologia 42, 385-390. Olive, L.S. 1951. Taxonomic notes on Louisiana fiingi. IIL Additions to the Tremellales. Mycologia 43, 677-690. Olive, L.S. 1952. Studies on the morphology and cytology of Itersonila perplexans Derx. Bull. Torrey Bot. Club. 72, 120-138. Olive, L.S. 1968. An unusual Heterobasidiomycete with Tilletia-\ikQ basidia. J. Elisha Mitchell Sci. Soc. 84, 261-266. Olson, H.C., and B.W. Hammer. 1935. Observations on yeasts causing gas in sweetened condensed milk. Iowa State Coll. J. Sci. 10, 37-43. Olson, H.C., and B.W. Hammer. 1937. The genera Sporobolomyces and Bullera from the standpoint of dairy products. Iowa State Coll. J. Sci. 11,207-213. Onishi, H. 1957. Studies on osmophilic yeasts. III. Classification of osmophilic soy and miso yeasts. Bull. Agric. Chem. Soc. Japan 21, 151-156. Onishi, H. 1972. Candida tsukubaensis sp. n. Antonie van Leeuwenhoek 38, 365-367. Onishi, H., and T. Suzuki. 1969a. Torulopsis mannitofaciens sp. n. isolated from soy-sauce mash. Antonie van Leeuwenhoek 36, 258260. Onishi, H., and T. Suzuki. 1969b. Microbial production of xylitol from glucose. Appl. Microbiol. 18, 1031-1035. Oshima, Y., and I. Takano. 1972. Genetic controlling system for homothallism and a novel method for breeding triploid cells in Saccharomyces. Fermentation Technology Today, Proc. 4th Int. Ferment. Symp. pp. 847-852. Ossama, W.T., C.J. Papasian, A.Y. Dixon and L.M. Potter. 1989. Saccharomyces cerevisiae pneumonia in a patient with acquired immune deficiency syndrome. J. Clin. Microbiol. 27, 1689-1691. Osterwalder, A. 1912. Bine neue Garungsmonilia: Monilia uini n. sp. Zentralbl. Bakteriol. Parasitenk, Abt. II, 33, 257-272. Osterwalder, A. 1924a. Neue aus Obst- und Traubensaften gewonnene Saccharomyces-AxiQn. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 60, 481-528. Osterwalder, A. 1924b. Schizosaccharomyces liquefaciens n. sp., eine gegen freie schweflige Saure widerstandsfahige Garhefe. Mitt. Geb. Lebensmitt. Hyg. 15, 5-28. Osterwalder, A. 1934. Von Kaltgarhefen und Kaltgarung. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 90, 226-249. Osumi, M., C. Shimoda and N. Yanagishima. 1974. Mating reaction in Saccharomyces cerevisiae. V Changes in the fine structure during the mating reaction. Arch. Mikrobiol. 97, 27-38. Ota, M. 1923. Cinq levures du genre Debaryomyces considerees comme pathogenes. Ann. Parasitol. Hum. Comp. 1, 124-136. Ota, M. 1924a. Beitrage zur Morphologic, Biologic und Systematik der pathogenen, asporogenen Sprosspilze. Dermatol. Wochenschr. 78, 216-237, 260-265. Ota, M. 1924b. Uber vier neue pathogene Hefearten von der Gattung Debaryomyces (Klocker). Dermatol. Wochenschr. 78, 284-289, 312316. Ota, M. 1925. Remarques complementaires sur la levure pathogene de favre (Myceloblastanon favrei n. sp.). Ann. Parasitol. Hum. Comp. 3, 181-184. Ota, M. 1926. Sur quelques champignons pathogenes du type Trichosporum beigeli Vuillemin. Ann. Parasitol. Hum. Comp. 4, 1-13. Ota, M. 1928. Champignons parasites de I'homme. VI (Etudes morphologiques et systematiques). Japan. J. Dermatol. Urol. 28, 1623, 381-424. In Japanese. Otani, Y. 1931. Yeasts found in fermented Worchester sauce. Zyozogaku Zasshi 9, 645-651. In Japanese. Otani, Y 1939. Microbiological studies on the "Nukamiso-pickles". Zentralbl. Bakteriol. Parasitenkd., Abt. II, 101, 139-151. Packer, N.H., and A.M. Bersten. 1977. Effect of Tween 80 on the morphology of Trigonopsis variabilis. J. Gen. Microbiol. 101, 233236. Pady, S.M. 1974. Sporobolomycetaceae in Kansas. Mycologia 66, 333338.

Pagano, J., J.D. Levin and W Trejo. 1957. Diagnostic medium for differentiation of species oi Candida. Antibiot. Ann. 137-143. Painting, K.A., and B. Kirsop. 1984. A note on the presence of novel DNA species in the spoilage yeasts Zygosaccharomyces bailii and Pichia membranaefaciens. J. Appl. Bacteriol. 56, 331-335. Palawal, D.K., and H.S. Randhawa. 1978. Evaluation of a simplified Guizotia abyssinica seed medium for differentiation of Cryptococcus neoformans. J. Clin. Microbiol. 7, 346-348. Palfi-ee, R.G.E., and H. Bussey. 1979. Yeast killer toxin: purification and characterization of the protein toxin from Saccharomyces cerevisiae. Eur. J. Biochem. 93, 487^93. Panchal, C.J., A. Harbison, I. Russell and G.G. Stewart. 1982. Ethanol production of genetically modified strains of Saccharomyces. Biotechnol. Lett. 4, 33-38. Panchal, C.J., C. Meacher, J. van Oostrom and G.G. Stewart. 1985. Phenotypic expression of Kluyveromyces lactis killer toxin against Saccharomyces spp. Appl. Environm. Microbiol. 50, 257-260. Papadakis, C.R. 1922. Sur I'existence d'une copulation heterogamique dans Pichia farinosa Lindner. C.R. Soc. Biol. 86, 447^49. Parker, A.R., T.D.E. Moore, J.C. Edman, J.M. Schwab and VJ. Davisson. 1994. Cloning, sequence analysis and expression of the gene encoding imidazole glycerol phosphate dehydratase in Cryptococcus neoformans. Gene 145, 135-138. Parle, J.N., and M.E. di Menna. 1966. The source of yeasts in New Zealand wines. N.Z. J. Agric. Res. 9, 98-107. Paster, N., S. Droby, E. Chalutz, M. Menasherov, R. Nitzan and C.L. Wilson. 1993. Evaluation of the potential of the yeast Pichia guilliermondii as a biocontrol agent against Aspergillus flavus and fiingi of stored soya beans. Mycol. Res. 97, 1201-1206. Patouillard, M. 1900. Essai Taxonomique sur les Families et les Genres des Hymenomycetes. Duclune, Lons-le-Saunier, 184pp. Patrignani, G., S. Pellegrini and F.M. Gerola. 1984. Differences in septal pore apparatus ultrastructure of Tremella mesenterica. Caryologia 37, 77-86. Patrignani, G., S. Patrignani and F.M. Gerola. 1989. Reproductive and ultrastructural aspects of Exobasidium rhododendri: phylogenetic considerations. Caryologia 42, 1-10. Patton, A.M., and R. Marchant. 1978. A mathematical analysis of dolipore/parenthesome structure in basidiomycetes. J. Gen. Microbiol. 109, 335-349. Pedersen, M.B. 1983. DNA sequence polymorphisms in the genus Saccharomyces. I. Comparison of the HIS4 and ribosomal RNA clusters in lager strains, ale strains and various species. Carlsberg Res. Commun. 48, 485-503. Pedersen, M.B. 1986. DNA sequence polymorphisms in the genus Saccharomyces. IV Homoeologous chromosomes, S. carlsbergensis and S. uvarum. Carlsberg Res. Commun. 51, 185-202. Pedersen, T.A. 1958. Cryptococcus terricolus nov. spec. A new yeast isolatedfi-omNorwegian soils. C.R. Trav. Lab. Carlsberg 31, 93-103. Peglion, V 1897. Sopra un nuovo blastomicete, parassita del fiiitto del Nocciuela. Atti R. Accad. Naz. Lincei, Ser. 5, 6, 216-278. Pelaez Campomanes, E, and C. Ramirez Gomez. 1956a. El Sporobolomyces hispanicus, nueva especie de Sporobolomycetaceae aislado de extracto de corteza de encina. Microbiol. Esp. 9, 3 7 ^ 1 . Pelaez Campomanes, F., and C. Ramirez Gomez. 1956b. Una nueva especie de Endomyces Reess: Endomyces ovetensis nov. sp. Microbiol. Esp. 9, 191-200. Pelczar, M.J., and E.C.S. Chan. 1981. Elements of Microbiology. McGraw-Hill, New York. Penttila, M.E., M.-L. Suinko, U. Lehtinen, M. Nikkola and J.K.C. Knowles. 1987. Construction of brewer's yeasts secreting fiingal endo-|3-glucanase. Curr. Genet. 12, 413-420. Pereira Filho. 1927. Macroglossia mycotica. J. Trop. Med. Hyg. 30, 810. Perfect, J.R., TH. Rude, L.M. Penning and S.A. Johnston. 1992. Cloning of the Cryptococcus neoformans TRPl gene by complementation in Saccharomyces cerevisiae. Gene 122, 213-217. Perlman, D. 1979. Microbial process for riboflavin production. In:

References H.J. Peppier and D. Perlman (Eds.), Microbial Technology, 2nd edn., Vol. I. Academic Press, New York, pp. 521-527. Persoon, C.H. 1822. Mycologia Eur. 1, 98. Peters, I.I., and F.E. Nelson. 1948. Preliminary characterization of the lipase of Mycotorula lipolytica. J. Bacteriol. 55, 593-600. Peterson, J.B., and H. Ris. 1976. Electron-microscopic study of the spindle and chromosome movement in the yeast Saccharomyces cerevisiae. J. Cell Sci. 22, 219-242. Peterson, J.B., R.H. Gray and H. Ris. 1972. Meiotic spindle plaques in Saccharomyces cerevisiae. J. Cell Biol. 53, 837-841. Peterson, S.W., and C.P Kurtzman. 1990. Phylogenetic relationships among species of the genus Issatchenkia Kudriavzev. Antonie van Leeuwenhoek 58, 235-240. Peterson, S.W., and C.P. Kurtzman. 1991. Ribosomal RNA sequence divergence among sibling species of yeasts. Syst. Appl. Microbiol. 14, 124-129. Petes, T.D., B. Beyers and W.L. Fangman. 1973. Size and structure of yeast chromosomal DNA. Proc. Natl. Acad. Sci. USA 70, 3072-3076. Petit, M., and A. Schneider. 1983. Chemical analysis of the wall of the yeast form of Taphrina deformans. Arch. Microbiol. 135, 141-146. Peynaud, E., and S. Domercq. 1956. Sur les Brettanomyces isoles de raisins et de vins. Arch. Mikrobiol. 24, 266-280. Pfeiflfer, P., and F. Radler. 1982. Purification and characterization of extracellular and intracellular killer toxin of Saccharomyces cerevisiae strain 28. J. Gen. Microbiol. 128, 2699-2706. Pfeiflfer, P., and F. Radler. 1984. Comparison of the killer toxin of several yeasts and the purification of a toxin of the type K2. Arch. Microbiol. 137, 357-361. Pfeiflfer, P, F Radler, G. Caspritz and H. Hanel. 1988. Eflfect of a killer toxin of yeast on eucaryotic systems. Appl. Environm. Microbiol. 54, 1068-1069. Pfeiflfer, T.J., and D.H. Ellis. 1992. Environmental isolation of Cryptococcus neoformans var. gattii from Eucalyptus tereticornis. J. Med. Vet. Mycol. 30, 4 0 7 ^ 0 8 . Pfeiflfer, T.J., and D.H. Ellis. 1993. Serotype of Australian environmental and clinical isolates of Cryptococcus neoformans. J. Med. Vet. Mycol. 31,401^04. Pfyflfer, G.E., C. Boraschi-Gaia, B. Weber, L. Hoesch, C.G. Orpin and D.M. Rast. 1990. A further report on the occurrence of acyclic sugar alcohols in fungi. Mycol. Res. 92, 219-222. Phafif, H.J. 1956. A proposal for amendment of the diagnosis of the genus Pichia Hansen. Antonie van Leeuwenhoek 22, 113-116. Phaflf, H.J. 1970a. Hanseniaspora Zikes. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 2 0 9 225. Phaflf, H.J. 1970b. Saccharomycopsis Schionning. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 725-732. Phaflf, H.J. 1970c. Sporobolomyces Kluyver et van Niel. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 831-862. Phaflf, H.J. 1970d. Bullera Derx. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 8 1 5 821. Phaflf, H.J. 1970e. Sporidiobolus Nyland. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 822830. Phaflf, H.J. 1971. Structure and biosynthesis of the yeast cell envelope. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. 2. Physiology and Biochemistry of Yeasts. Academic Press, New York, pp. 135-210. Phaflf, H.J. 1977. Enzymatic yeast cell wall degradation. In: R.E. Feeney and J.R. Whitaker (Eds.), Food Proteins - Improvement through Chemical and Enzymatic Modification. Advances in Chemistry Services No. 160. American Chemical Society, Washington, DC, pp. 244-282. Phaflf, H.J. 1985. Biology of some yeasts other than Saccharomyces. In: A.L. Demain and N.A. Solomon (Eds.), Biology ofl Industrial

993

Microorganisms. Benjamin/Cummings, Menlo Park, CA, pp. 537562. Phaflf, H.J., and D.G. Ahearn. 1970. Rhodotorula Harrison. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 1187-1223. Phafif, H.J., and M.A. Amerine. 1979. Wine. In: H.J. Peppier and D. Perlman (Eds.), Microbial Technology, 2nd edn.. Vol. II. Academic Press, New York, pp. 132-153. Phaflf, H.J., and L. do Carmo-Sousa. 1962. Four new species ofl yeast isolated from insect frass in bark of Tsuga heterophylla (Raf) Sargent. Antonie van Leeuwenhoek 28, 193-207. Phaflf, H.J., and J.W Fell. 1970. Cryptococcus Kiitzing emend. Phaflf et Spencer. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 1088-1145. Phaflf, H.J., and D.L. Holzschu. 1981. Genome comparison in yeast systematics: evolutionary divergence among cactus-specific yeasts. In: D. von Wettstein, J. Friis, M. Kielland-Brandt and A. Stenderup (Eds.), Proc. Benzon Symposium 16, Molecular Genetics in Yeasts. Munksgaard, Copenhagen, pp. 4 1 3 ^ 2 7 . Phaflf, H.J., and E.P. Knapp. 1956. The taxonomy ofl yeasts flound in exudates ofl certain trees and other natural breeding sites ofl some species of Drosophila. Antonie van Leeuwenhoek 22, 117-130. Phaflf, H.J., and C.P. Kurtzman. 1984. Lipomyces Lodder et Kregervan Rij. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 252-262. Phaflf, H.J., and M.W Miller. 1961. A specific microflora associated with the fig wasp, Blastophaga psenes Linnaeus. J. Insect. Pathol. 3, 233-243. Phaflf, H.J., and M.W. Miller. 1984a. Cyniclomyces van der Walt & Scott. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 125-129. Phaflf, H.J., and M.W. Miller. 1984b. Schwanniomyces Klocker. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 4 2 3 ^ 2 6 . Phafif, H.J., and J.F.T. Spencer. 1969. Improved parameters in the separation of species in the genera Rhodotorula and Cryptococcus. Proc. II Int. Symp. Yeasts. Bratislava, 1966, pp. 59-67. Phaflf, H.J., and WT. Starmer. 1980. Specificity of natural habitats for yeasts and yeast-like organisms. In: F.A. Skinner, S.M. Passmore and R.R. Davenport (Eds.), Biology and Activities of Yeasts. Academic Press, London, pp. 79-102. Phaflf, H.J., and W.T. Starmer. 1987. Yeasts associated with plants, insects and soil. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, 2nd edn.. Vol. I, Biology of Yeasts. Academic Press, London, pp. 123-180. Phaflf, H.J., and M. Yoneyama. 1961. Endomycopsis scolyti, a new heterothallic species ofl yeast. Antonie van Leeuwenhoek 27, 196202. Phaflf, H.J., E.M. Mrak and O.B. WiUiams. 1952. Yeasts isolated from shrimp. Mycologia 44, 4 3 1 ^ 5 1 . Phaflf, H.J., M.W. Miller and M. Shifrine. 1956. The taxonomy of yeasts isolated from Drosophila in the Yosemite region of California. Antonie van Leeuwenhoek 22, 145-161. Phaflf, H.J., M.W. Miller and WB. Cooke. 1960. A new species of Schwanniomyces: Schwanniomyces alluvius. Antonie van Leeuwenhoek 26, 182-188. Phaflf, H.J., M.W. Miller and J.F.T. Spencer. 1964. Two new species ofl Pichia isolated from slime fluxes of deciduous trees. Antonie van Leeuwenhoek 30, 132-140. Phaflf, H.J., M.W. Miller, M. Yoneyama and M. Soneda. 1972. A comparative study ofl the yeast florae associated with trees flrom the Japanese islands and on the west coast of North America. In: G. Terui (Ed.), Fermentation Technology Today. Society of Fermentation Technology, Osaka, Japan, pp. 759-774. Phafif, H.J., M.W. Miller, M. Miranda, WB. Heed and W.T Starmer. 1974. Cryptococcus cereanus, a new species of the genus Cryptococcus. Int. J. Syst. Bacteriol. 24, 4 8 6 ^ 9 0 . Phaflf, H.J., M.W. Miller and M. Miranda. 1976. Pichia scutulata, a new species flrom tree exudates. Int. J. Syst. Bacteriol. 26, 326-331.

994

References

Phaff, H.J., M.W. Miller and E.M. Mrak. 1978a. The Life of Yeasts, 2nd edn. Harvard University Press, Cambridge, MA, 341pp. Phaff, H.J., W.T. Starmer, M. Miranda and M.W. Miller. 1978b. Pichia heedii, a new species of yeast indigenous to necrotic cacti in the North American Sonoran Desert. Int. J. Syst. Bacteriol. 28, 326-331. Phaff, H.J., M.W. Miller and M. Miranda. 1979. Hansenula alni, a new heterothallic species of yeast from exudates of alder trees. Int. J. Syst. Bacteriol. 29, 60-63. Phaff, H.J., W.T. Starmer, M. Miranda and M.W. Miller. 1980. Candida mucilagina, a new species of yeast found in decaying cladodes of Opuntia inermis and in necrotic tissue of Cereoid cacti. Int. J. Syst. Bacteriol. 30, 596-600. Phaff, H.J., Y. Yamada, J. Tredick and M. Miranda. 1983. Hansenula populi, a new homothallic species of yeast from exudates of Cottonwood trees. Int. J. Syst. Bacteriol. 33, 375-380. Phaff, H.J., W.T Starmer, J. Tredick and M. Miranda. 1985. Pichia deserticola and Candida deserticola, two new species of yeasts associated with necrotic stems of cacti. Int. J. Syst. Bacteriol. 35, 211-216. Phaff, H.J., M. Miranda, W.T Starmer, J. Tredick and J.S.F. Barker. 1986. Clauispora opuntiae, a new heterothallic yeast occurring in necrotic tissue of Opuntia species. Int. J. Syst. Bacteriol. 36, 372-379. Phaff, H.J., W.T Starmer, J. Tredick-Kline and V Aberdeen. 1987a. Pichia barkeri, a new yeast species occurring in necrotic tissue of Opuntia stricta. Int. J. Syst. Bacteriol. 37, 386-390. Phaff, H.J., W.T. Starmer and J. Tredick-Kline. 1987b. Pichia kluyveri sensu lato - a proposal for two new varieties and a new anamorph. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 4 0 3 414 (Stud. Mycol. 30, 4 0 3 ^ 1 4 ) . Phaff, H.J., W.T. Starmer, M.A. Lachance, V Aberdeen and J. TredickKline. 1992. Pichia caribaea, a new species of yeast occurring in necrotic tissue of cacti in the Caribbean area. Int. J. Syst. Bacteriol. 42, 459-462. Phaff, H.J., W.T. Starmer, M.-A. Lachance and RF. Ganter. 1994. Candida caseinolytica sp. nov., a new species of yeast occurring in necrotic tissue of Opuntia and Stenocereus species in the southwestern United States and Baja California, Mexico. Int. J. Syst. Bacteriol. 44, 641-645. Phelan, J.A., B.R. Saltzman, G.H. Friedland and R.S. Klein. 1987. Oral findings in patients with acquired immunodeficiency syndrome. Oral Surg. Oral Med. Oral Path. 64f, 50-56. Philliskirk, E., and T.W Young. 1975. The occurrence of killer character in yeasts of various genera. Antonie van Leeuwenhoek 41, 147-151. Picci, G., and O. Verona. 1962. Su di alcuni fattori che influenzano la morfogenesi di Trigonopsis variabilis. Sch. Atti. 1st. Bot. Univ. Lab. Cryptogam. Pavia, Ser. V, 20, 3-8. Pignal, M.-C. 1967. Une nouvelle espece de levure isolee de larves d'insectes: Pichia stipitis. Bull. Mens. Soc. Linn. Lyon 36, 163-168. Pignal, M.-C. 1968. Quelques levures associees a des insectes xylophages de la Republique Centrafricaine. Cahiers de la Maboke 6, 5-15. Pignal, M.-C. 1970. A new species of yeast isolated from decaying insect-invaded wood. Antonie van Leeuwenhoek 36, 525-529. Pijper, A. 1928. Een nieuwe Hanseniaspora. Verb. K. Ned. Akad. Wet. Afd. Natuurk. 37, 868-871. Pilat, A. 1957. Ubersicht der europaischen Auriculariales und Tremellales unter besonderer Berucksichtigung der tschechoslowakischen Arten. Acta Mus. Nat. Pragae 13, B(4), 115-210. Pina, A., I.L. Calderon and T. Benitez. 1986. Intergeneric hybrids of Saccharomyces cereuisiae and Zygosaccharomyces fermentati obtained by protoplast fusion. Appl. Environ. Microbiol. 51, 9 9 5 1003. Pitt, J.I. 1974. Resistance of some food spoilage yeasts to preservatives. Food Technol. Austr. 26, 238-241. Pitt, J.I., and A.D. Hocking. 1985. Fungi and Food Spoilage. Academic Press Australia, Sydney, pp. 335-364. Pitt, J.I., and M.W. Miller. 1968. Sporulation in Candida pulcherrima,

Candida reukaufii and Chlamydozyma species: their relationships with Metschnikowia. Mycologia 60, 663-685. Pitt, J.I., and M.W. Miller. 1970a. Speciation in the yeast genus Metschnikowia. Antonie van Leeuwenhoek 36, 357-381. Pitt, J.I., and M.W. Miller. 1970b. The parasexual cycle in yeasts from the genus Metschnikowia. Mycologia 62, 462-473. Plant, H.C. 1885. Beitrag zur Systematischen Stellung des Soorpilzes in der Botanik. Voigt, Leipzig. Plant, H.C. 1887. Neue Beitrage zur systematischen Stellung des Soorpilzes in der Botanik. Voight, Leipzig. Plevako, E.A., and M.E. Cheban. 1935. Biological observations on yeasts utilizing pentoses. Mikrobiologiya 4, 86-95. In Russian. Polacheck, I., and K.J. Kwon-Chung. 1988. Melanogenesis in Cryptococcus neoformans. J. Gen. Microbiol. 134, 1037-1041. Polacheck, I., VI. Hearing and K.J. Kwon-Chung. 1982. Biochemical studies of phenoloxidase and utilization of catecholamines in Cryptococcus neoformans. J. Bacteriol. 150, 1212-1220. Pollacci, G., and A. Nannizzi. 1926.1 Miceti Patogeni dell'Uomo e degli Animali. Vol. 5. Capelli, Bologna. Pollacci, G., and A. Nannizzi. 1927. Sui caratteri dei generi Monila e Cryptococcus. Att. R. Accad. Fisiocrit. Siena, Serie X, 2, 35-44. Pollacci, G., and A. Nannizzi. 1928.1 Miceti Patogeni dell'Uomo e degli Animali, Vol. 7. Siena, San Bernardino. Pollacci, G., and A. Nannizzi. 1929.1 Miceti Patogeni dell'Uomo e degli Animali, Vol. 9. Siena, San Bernardino. Polonelli, L., and G. Morace. 1986. Reevaluation of the yeast killer phenomenon. J. Clin. Microbiol. 24, 866-869. Polonelli, L., R. Lorenzini, F. De Bemardis and G. Morace. 1986. Potential therapeutic effect of yeast killer toxin. Mycopathologia 96, 103-107. Polonelli, L., G. Dettori, C. Cattel and G. Morace. 1987. Biotyping of mycelial fungus cultures by the killer system. Eur. J. Epidemiol. 3, 237-242. Poncet, S. 1973a. Incidence de I'introduction d'especes nouvelles sur les groupes etablis dans le genre Hansenula (Ascomycetes, Cryptococcacees) par I'application d'une methode d'analyse factorielle. Ann. Microbiol. (Inst. Pasteur, Paris) 124A, 95-108. Poncet, S. 1973b. Taxonomie numerique du genre Kluyveromyces. Mycopathol. Mycol. Appl. 51, 267-281. Poncet, S., and J.B. Fiol. 1972. Taxonomy oi Kluyveromyces: evaluation of DNA base composition. Antonie van Leeuwenhoek 38, 145-152. Poon, N.H., and A.W Day. 1976a. Somatic nuclear division in the sporidia of Ustilago violaceae. III. Ultrastructural observations. Can. J. Microbiol. 22, 495-506. Poon, N.H., and A.W. Day. 1976b. Somatic nuclear division in the sporidia of Ustilago violaceae. IV Microtubules and the spindle-pole body Can. J. Microbiol. 22, 507-522. Popta, C.M.L. 1899. Beitrag zur Kenntniss der Hemiasci. Flora, Allgem. Bot. Ztg. 5-50. Pore, R.S. 1972. Nutritional basis for relating Prototheca and Chlorella. Can. J. Microbiol. 18, 1175-1177. Pore, R.S. 1973. Selective medium for the isolation oiPrototheca. Appl. Environ. Microbiol. 26, 648-649. Pore, R.S. 1985. Prototheca taxonomy Mycopathologia 90, 129-139. Pore, R.S. 1986. The association of Prototheca spp. with slime flux in Ulmus americana and other trees. Mycopathologia 94, 67-73. Pore, R.S. 1997. Prototheca and Chlorella species. In: L. Ajello (Ed.), Mycology, Vol. 4, Topley and Wilson's Microbiology and Microbial Infections, 9th edn. Arnold, London (in press). Pore, R.S., and WG. Sorenson. 1990. Reniforma strues, a new yeast from wastewater. Mycologia 82, 549-553. Pore, R.S., R.F. d'Amato and L. Ajello. 1977. Fissuricella gen. nov: a new taxon for Prototheca filamenta. Sabouraudia 15, 69-78. Pore, R.S., E.A. Barnett, WC. Barnes and J.D. Walker Jr. 1983. Prototheca ecology. Mycopathologia 81, 49-62. Pore, R.S., D.E Boehm and E.A. Barnett. 1986. Prototheca (achloric alga) in wastewater. Water, Air, Soil Pollut. 27, 355-362.

References

995

Pore, R.S., T.A. Shahan and M.D. Pore. 1987. Occurrence of Prototheca Rabenhorst, L. 1867. Zwei Parasiten an den todten Haaren der Chignons. zopfii, a mastitis pathogen, in milk. Vet. Microbiol. 15, 315-323. Hedwigia 6, 49. Pou, J., X. Figarella, M.J. Fernandez and J. Garrido. 1985. Obtencion Radford, A. 1993. A fiingal phylogeny based upon orotidine de proteinas a partir de bagacillo de caiia. I. Estudio de hidrolisis de 5'-monophosphate decarboxylase. J. Mol. Evol. 36, 389-395. bagacillo i seleccion de especies de levaduras. Microbiol. Espagii. 38, Radler, F, M.J. Schmitt and B. Meyer. 1990. Killer toxin of Hansenia81-88. spora uvarum. Arch. Microbiol. 154, 175-178. Preece, T.F., and C.H. Dickinson (Eds.). 1971. Ecology of Leaf Surface Ragnini, A., and H. Fukuhara. 1988. Mitochondrial DNA of the yeast Micro-Organisms. Academic Press, New York. Kluyueromyces: guanine-cytosine rich sequence clusters. Nucl. Acids Pretorius, E.E., F. Spaaij, G. Weber and J.P. van der Walt. 1993. MyxoRes. 16, 8433-8442. zyma monticola sp. nov. (Candidaceae), a new species from South Raitvir, A.G. 1967. Key to the Heterobasidiomycetidae of the U.S.S.R. African soil. Syst. Appl. Microbiol. 16, 261-265. Academy of Sciences of the U.S.S.R. Academy of Sciences of Price, C.W., and H.J. PhaflF. 1979. Debaryomyces polymorphus and Estonian S.S.R., Leningrad. In Russian. D. pseudopolymorphus, new taxonomic combinations. Mycologia 71, Rambelli, A. 1959. Intomo a qualche aspetto nutrizionale e morfologico 444-445. di Trigonopsis variabilis Schachner. Nuovo G. Bot. Ital. 66, 296-300. Price, C.W., G.B. Fuson and H.J. Phafif. 1978. Genome comparison in Ramirez Gomes, C. 1953. Estudio sobre nuevas especies de levaduras yeast systematics: delimitation of species within the genera Schwanaisladas de diflferentes sustratos. Microbiol. Esp. 6, 249-253. niomyces, Saccharomyces, Debaryomyces and Pichia. Microbiol. Rev. Ramirez, C. 1954. Note sur deux nouvelles especes de levures isolees 42, 161-193. de divers miheux. Rev. Mycol. 19, 98-102. Pridham, T.G., and K.B. Raper. 1950. Ashbya gossypii - its significance Ramirez Gomez, C. 1957. Contribucion al estudio de la ecologia de in nature and in the laboratory. Mycologia 42, 603-623. las levaduras. I. Estudio de levaduras aisladas de hongos carnosos. Prillinger, H., C. Dorfler, G. Laaser, B. Eckerlein and L. Lehle. 1990a. Microbiol. Esp. 10, 215-247. Ein Beitrag zur Systematik und Entwicklungsbiologie hoherer Pilze: Ramirez Gomez, C. 1959. Nouvelle diagnose d'une levure isolee d'une Hefe-Typen der Basidiomyceten. Teil I: Schizosaccharomycetales, Amanita lividopallescens, Geotrichum zambettakesii n. comb. Rev. Protomyces-Typ. Z. Mykol. 56, 219-250. Mycol. 24, 434^36. Prillinger, H., C. Dorfler, G. Laaser and G. Hauska. 1990b. Ein Beitrag Ramirez, C. 1974. A compilation of descriptions of new Candida species zur Systematik und Entwicklungsbiologie hoherer Pilze. Hefe-Typen with keys to all species of the genus described up to date. Microbiol. der Basidiomyceten. Teil III: Ustilago-Typ. Z. Mykol. 56, 251-278. Esp. 27, 15-78. Prillinger, H., Ch. Dorfler and G. Laaser. 1990c. Summary of theses and Ramirez, C. 1988. Emendation of yeasts isolated from decayed papers in press or recently published. Yeast Newsletter 39, 31-34. wood in the evergreen rainy Valdivian forest of southern Chile. Prillinger, H., G. Demi, C. Dorfler, G. Laaser and W Lockau. 1991a. Mycopathologia 103, 95-101. Ein Beitrag zur Systematik und Entwicklungsbiologie hoherer Pilze. Ramirez, C. 1989. A new species of Trichosporonoides isolated from Hefe-Typen der Basidiomyceten. Teil II: Microbotryum-Typ. Bot. Acta sweetened orange/mango drink in Australia. Mycopathologia 108, 25104, 5-17. 30. Prillinger, H., G. Laaser, C. Dorfler and K. Ziegler. 1991b. Ein Beitrag Ramirez, C, and J. Boidin. 1953a. Trois nouvelles especes de levures zur Systematik und Entwicklungsbiologie hoherer Pilze. Hefe-Typen isolees de hqueurs tannantes. Rev. Mycol. 18, 149-156. der Basidiomyceten. Teil IV: Dacrymyces-Typ, Tremella-Typ. Sydowia Ramirez, C, and J. Boidin. 1953b. Nuevas especies de levaduras aisladas 53, 170-218. de liquidos curtientes. Microbiol. Esp. 4, 405^14. Prillinger, H., F Oberwinkler, C. Umile, K. Tlachac, R. Bauer, C. Dorfler Ramirez, C, and J. Boidin. 1954. Saccharomyces chambardi, nouvelle and E. Taufratzhofer. 1993. Analysis of cell wall carbohydrates espece de levure isolee de liqueur tannante. Bull. Mens. Soc. Linn. (neutral sugars) from ascomycetous and basidiomycetous yeasts with Lyon 23, 151-152. and without derivatization. J. Gen. Appl. Microbiol. 39, 1-34. Ramirez, C, and J. Boidin. 1955. Nueva especie de levadura aislada de Prillinger, H., E. Staudacher, K. Lopandic, F Altmann, C. Umile and liquido curtiente Saccharomyces chambardi nov. sp. Microbiol. Esp. R. Messner. 1994. Cell wall neutral sugars of yeasts as a tool to clarify 8, 225-228. phylogenetic relationships of higher fringi. In: RIKEN Symposium, Ramirez, C, and A. Gonzalez. 1984a. Three new, nonfermenting, and Wako, Saitama, Japan, pp. 15-17. nitrate-negative Candida species isolated from decayed wood in the Pringsheim, E., and H. Bilewsky. 1911. Uber Rosahefe. Beitr. Biol. evergreen rainy Valdivian forest of southern Chile. Mycopathologia Pflanz. 10, 118-133. 87, 175-180. Pringsheim, E.G. 1963. Farblose Algen. G. Fischer Verlag, Stuttgart. Pritchard, F.J., and W.S. Porte. 1923. Watery-rot of tomato fruits. J. Agric. Ramirez, C, and A. Gonzalez. 1984b. Rhodotorula grinbergsii sp. nov. isolated from decayed wood in the evergreen rainy Valdivian forest of Res. 24, 895-906. southern Chile. Mycopathologia 88, 51-53. Prostoserdov, N.N., and R. Afrikian. 1933. Jerezwein in Armenien. Ramirez, C, and A. Gonzalez. 1984c. Two new species and one Weinland 5, 389 (cited by Kudryavtsev 1960). variety of nitrate-utilizing mycelial Candida isolated from decayed Pulverer, C., and H. Korth. 1971. Cryptococcus neoformans: wood in the evergreen rainy Valdivian forest of southern Chile. Pigmentbildung aus verschiedenen Polyphenolen. Med. Microbiol. Mycopathologia 88, 55-60. Immunol. 175, 46-51. Puntoni, V 1935. Manuale d. Microbiol., Studio, Edit. d. 1st. Univ. Roma, Ramirez, C, and A. Gonzalez. 1984d. Four new species of Apiotrichum isolated from decayed wood in the evergreen rainy Valdivian forest of Ed. 2 (cited by Lodder and Kreger-van Rij 1952). southern Chile. Mycopathologia 88, 71-78. Pyke, M. 1958. The technology of yeast. In: A.H. Cook (Ed.), The Chemistry and Biology of Yeasts. Academic Press, New York, Ramirez, C, and A. Gonzalez. 1984e. Pichia scaptomyzae sp. nov, isolated from Scaptomyza multispinosa Malloch (Diptera) in southern pp. 535-586. Chile. Mycopathologia 88, 79-81. Quackenbush, R.L. 1988. Endosymbionts of killer paramecia. In: Ramirez, C, and A. Gonzalez. 1984f Five new filamentous, glucoseH.D. Gottz (Ed.), Paramecium. Springer, Berlin, pp. 406-418. fermenting Candida isolated from decayed wood in the evergreen Queyrat, L., and G. Laroche. 1909. Sur une mycose vaginale rainy Valdivian forest of southern Chile. Mycopathologia 88, 83-92. (Parendomyces albus). Etude microbiologique, experimentale et Ramirez, C, and A. Gonzalez. 1984g. Three new filamentous, therapeutique. Bull. Mem. Soc. Med. Hop. Paris 28, 111-136. fermenting Candida isolated from decayed wood in the evergreen Quinquaud, M. 1868. Nouvelles recherches sur le muguet. Classification rainy Valdivian forest of southern Chile. Mycopathologia 88, 93-98. et conditions de developpement du Syringospora robinii (dit Oidium Ramirez, C, and A. Gonzalez. 1984h. Two new amycelial Candida albicans). Arch. Phys. Norm. Pathol. 1, 290-305.

996

References

isolated from decayed wood in the evergreen rainy Valdivian forest of southern Chile. Mycopathologia 88, 99-103. Ramirez, C , and A. Gonzalez. 1984i. Candida santjacobensis and Candida ancudensis, two new species of yeasts isolated from decayed wood in the evergreen rainy Valdivian forest of southern Chile. Mycopathologia 88, 105-109. Ramirez, C , and A. Gonzalez, 1984j. Two new filamentous, nonfermenting Candida and a new Schizoblastosporion isolated from decayed wood in the evergreen rainy Valdivian forest of southern Chile. Mycopathologia 88, 165-171. Ramirez, C , and C. Gonzalez. 1972. Candida iberica sp. n. A new species isolated from Spanish sausages. Can. J. Microbiol. 18, 17781780. Ramirez, C , and A.T. Martinez. 1978. Torulopsispampelonensis sp. nov. A new species of yeast isolated from beech forest soil. Can. J. Microbiol. 24, 4 3 3 ^ 3 5 . Ramirez Gomez, C , and G. Sierra Rico. 1956. Una nueva variedad de Torulopsis holmii (Jorgensen) y estudio de sus productos metabolicos. Microbiol. Esp. 9, 147-162. Ramirez, C , C. Gonzalez and C. Gutierrez. 1981. Rhodotorula matritense sp. nov., isolated from powdered red pepper {Capsicum frutescens L.). Mycopathologia 74, 433-435. Rankine, B.C., and J.C.M. Fornachon. 1964. Schizosaccharomyces malideuorans sp. n., a yeast decomposing L-malic acid. Antonie van Leeuwenhoek 30, 73-75. Rao, V, and G.S. de Hoog. 1975. Some notes on Torula. Persoonia 8, 199-206. Raper, J.R. 1966. Genetics of sexuality in higher fringi. Ronald Press, New York. Raper, J.R. 1968. On the evolution of fiingi. In: G.C. Ainsworth and A.S. Sussman (Eds.), The Fungi, An Advanced Treatise, Vol. 3. Academic Press, New York, pp. 677-693. Rast, D.M., and G.E. Pfyffer. 1989. Acyclic polyols and higher taxa of fungi. Bot. J. Linnean Soc. 99, 39-57. Rayner, R.W. 1970. A Mycological Colour Chart. Commonwealth Mycological Institute, Kew, Surrey and British Mycological Society. Re, S. 1925. Observations on the cultural and biochemical characters of Monilia castellanii (Cryptococcus castellani) and Monilia macroglossiae (Cryptococcus macroglossiae). J. Trop. Med. Hyg. 28, 317-319. Recca, J., and E.M. Mrak. 1952. Yeasts occurring in citrus products. Food Technol. 6, 4 5 0 ^ 5 4 . Redaelli, P. 1925.1 miceti come associazione microbica nelle tubercolosi polmonare cavitaria. Osservazioni micopatologiche, istopatologiche e sperimentali. Mem. Prem. R. 1st, Lombardo Sci. Lett. Pavia. Redaelli, P. 1931. II problema della Torulopsidaceae e dei loro rapporti con I'uomo e con la patologia umana studiato particolarmente in Italia. (Blastomiceti e blastomicosi.) Riv. Biol. 13, 171-235. Redaelli, P., and R. Ciferri. 1941. Nuovi reperti di Trichosporon ed osservazioni intemo a questo genere. Mycopathologia 3, 203-224. Redaelli, P., and R. Ciferri. 1947. Un quadriennio di attivita del Centro di Micologia Umana e comparata di Pavia. Mycopathologia 4, 2 5 ^ 7 . Redaelli, P., R. Ciferri and A. Giordano. 1937. Debaryomyces neoformans (Sanfelice) nobis n. comb, pour les especes du groupe Saccharomyces hominis-Cryptococcus neoformans-Torula histolytica. Boll. Sez. Ital. Soc. Int. Microbiol. 9, 24-28. Redaelli, P., R. Ciferri and C. Cavallero. 1938. Sul presento Endomyces albicans Vuillemin. Mycopathologia 2, 116-121. Reddy, M.S., and C.L. Kramer. 1975. A taxonomic revision of the Protomycetales. Mycotaxon 3, 1-50. Redhead, S.A., and D.W. Malloch. 1977. The Endomycetaceae: new concepts, new taxa. Can J. Bot. 55, 1701-1711. Reess, M. 1870. Botanische Untersuchungen iiber die Alkoholgahrungspilze. Arthur Felix, Leipzig. Reess, M. 1877. Uber den Soorpilz. Sitzungsber. Phys. Med. Soc. Erlangen 9, 190-195. Reid, D.A. 1970. New or interesting records of British Hymenomycetes, IV Trans. Brit. Mycol. Soc. 55, 4 1 3 ^ 4 1 .

Reid, I.D. 1974. Properties of conjugation hormones (erogens) from the basidiomycete Tremella mesenterica. Can. J. Bot. 52, 521-524. Reiersol, S. 1955. Species oiRhodotorula isolated from laryngeal swabs. Antonie van Leeuwenhoek 21, 286-289. Reiersol, S. 1958. Torulopsis noruegica nov. sp. Antonie van Leeuwenhoek 24, 111-112. Reiersol, S., and M. di Menna. 1958. A new Cryptococcus species. Antonie van Leeuwenhoek 24, 27-30. Reiss, E. 1854. J.F. Klotzsch, Herbarium vivum mycologicum. No. 1885. Reiss, F. 1935. Eine neue pathogene Hefe des Genus Mycotorula. Zentralbl. Bakteriol. Parasitenk. Infektionskr. Abt. 1 134, 189-191. Rennerfelt, E. 1937. Undersokningar over svampinfektionen i slipmassa occii des utveckling dari. Sven. Skogsvardsfoerb. Tidskr. 47, 159. Restrepo, B.I., and A.G. Barbour. 1989. Cloning of 18S and 25S rDNAs from the pathogenic ftingus Cryptococcus neoformans. J. Bacteriol. 171, 5596-5600. Rhodes, J.C, and K.J. Kwon-Chung. 1982. A new efficient method for protoplast formation in Cryptococcus neoformans. Abstr. Annu. Meeting Am. Soc. Microbiol, F61, p, 336, Rhodes, J.C, and K.J. Kwon-Chung. 1985. Production and regeneration of protoplasts from Cryptococcus. Sabouraudia 23, 81-83. Rhodes, J.C, I. Polacheck and K.J. Kwon-Chung. 1982. Phenoloxidase activity and virulence in isogenic strains of Cryptococcus neoformans. Infect. Immun. 36, 1175-1184. Ribeiro, E. 1995. Genomic comparisons of strains of selected species of Candida and Pichia, MS Thesis. Georgia State University, Atlanta, GA. Ridgeway Watt, P. 1979. An improved automatic multipoint inoculator. In: FA. Skinner and D.W. Lovelock (Eds.), Identification Methods for Microbiologists, 2nd edn. Academic Press, London, pp. 297-304. Rischin, M, 1921, Uber einen Fall von bisher noch nicht beschriebener Parendomyces-Erkrankung, die unter dem Bilde der tiefen (Sycosis parasitaria) und oberflachlichen Trichophytie verlief. Arch. Dermatol. Syph. 134, 232-242. Robards, A.W, and W.J. Lucas. 1990. Plasmodesmata. Annu. Rev. Plant Physiol. Plant Mol. Biol. 41, 3 6 9 ^ 1 9 . Robbins, W.J., and R. Ma. 1944. A Rhodotorula deficient for paraamino-benzoic acid. Science 100, 85-86. Roberson, R.W, and E.S. Luttrell. 1987a. Ultrastructure of teliospore ontogeny in Tilletia indica. Mycologia 79, 753-763. Roberson, R.W, and E,S. Luttrell. 1987b. Dolipores in Tilletia. Mycologia 81, 650-652, Roberts, C , and J,P. van der Walt. 1958. The life cycle of Kluyueromyces polysporus. C R . Lab. Carlsberg 31, 129-148. Roberts, G.D., C D . Horstmeier, G.A. Land and J.H. Foxworth. 1978. Rapid urea broth test for yeasts. J. Clin. Microbiol. 7, 584-588. Roberts, R.G. 1990. Postharvest biological control of gray mold of apple by Cryptococcus laurentii. Phytopathology 80, 526-530, Robin, C 1853, Histoire naturelle des vegetaux parasites qui croissent sur I'homme et sur les animaux vivants, Bailliere, Paris. Robinow, CF. 1961. Mitosis in the yeast Lipomyces lipofer J. Biophys. Biochem. Cytol. 9, 879-892. Rodrigues, C , D. Yarrow and I. Spencer-Martins. 1996. Nuclear DNA comparisons among strains of Pichia membranifaciens. Abstr. 9th Int. Symp. on Yeasts, Sydney, Austraha, p. 31. Rodrigues de Miranda, L. 1972. Filobasidium capsuligenum nov. comb. Antonie van Leeuwenhoek 38, 91-99. Rodrigues de Miranda, L. 1975. Two new species of the genus Sterigmatomyces. Antonie van Leeuwenhoek 45, 193-199. Rodrigues de Miranda, L. 1978. A new genus: Sporopachydermia. Antonie van Leeuwenhoek 44, 4 3 9 ^ 5 0 . Rodrigues de Miranda, L. 1979. Clauispora, a new yeast genus of the Saccharomycetales. Antonie van Leeuwenhoek 45, 4 7 9 ^ 8 3 . Rodrigues de Miranda, L. 1984a. Clauispora Rodrigues de Miranda. In: N.J.W Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp, 120-122, Rodrigues de Miranda, L, 1984b, Sporopachydermia Rodrigues de

References Miranda. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 427^30. Rodrigues de Miranda, L. 1984c. Bullera Derx. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 577-584. Rodrigues de Miranda, L. 1984d. Cryptococcus Kiitzing emend. Phaff et Spencer. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 845-872. Rodrigues de Miranda, L., and W Batenburg-van der Vegte. 1981. Cryptococcus mollis Kiitzing type species of the genus Cryptococcus. Antonie van Leeuwenhoek 47, 65-72. Rodrigues de Miranda, L., and H.G. Diem. 1974. Deux nouvelles especes de levures isolees de la phyllosphere de I'Orge. Can. J. Bot. 52, 279282. Rodrigues de Miranda, L., and B. Norkrans. 1968. Candida suecica sp. n. isolated from marine environment. Antonie van Leeuwenhoek 34, 115-118. Rodrigues de Miranda, L., and T. Torok. 1976. Pichia humboldtii sp. nov, the perfect state of Candida ingens. Antonie van Leeuwenhoek 42, 343-348. Rodrigues de Miranda, L., K.R. Appel and H. Seyfarth. 1980. Pichia sorbitophila sp. nov. Antonie van Leeuwenhoek 46, 157-159. Rodrigues de Sousa, H., I. Spencer-Martins and N. van Uden. 1990. Active fructose transport in Saccharomyces sensu stricto. Taxonomic implications. Acta Varia 5, 127-134. Roeijmans, H.J., G.W van Eijk and D. Yarrow. 1989. Some name changes necessitated by redefinition of the genus Candida. Mycotaxon 35, 405-^06. Rogers, A.L., K.J. Kwon-Chung and S.L. Flegler. 1980. A scanning electron microscope comparison of basidial structures in Filobasidiella neoformans and F. bacillispora. Sabouraudia 18, 85-89. Rogers, D., and E.A. Bevan. 1978. Group classification of killer yeasts based on cross-reactions between strains of different species and origin. J. Gen. Microbiol. 105, 199-202. Romano, A.H. 1966. Dimorphism. In: G.C. Ainsworth and A.S. Sussman (Eds.), The Fungi, An Advanced Treatise. Vol. 2. Academic Press, New York, pp. 181-209. Roncero, C, M.H. Valdivieso, J.C. Ribas and A. Duran. 1988a. Effect of calcofluor white on chitin synthases from Saccharomyces cerevisiae. J. Bacteriol. 170, 1945-1949. Roncero, C., M.H. Valdivieso, J.C. Ribas and A. Duran. 1988b. Isolation and characterization of Saccharomyces cerevisiae mutants resistant to calcofluor white. J. Bacteriol. 170, 1950-1954. Rooney, L., and P.B. Moens. 1973a. Nuclear divisions at meiosis in the ascomycetous yeast Wickerhamiafluorescens.Can. J. Microbiol. 19, 1383-1387. Rooney, L., and P.B. Moens. 1973b. The fine structure of ascospore delimitation in the yeast Wickerhamia fluorescens. Can. J. Microbiol. 19, 1389-1392. Rosa, C.A., A.N. Hagler, L.C.S. Mendonga-Hagler, P.B. Morais, N.C.M. Gomes and R.F. Moneiro. 1992. Clauispora opuntiae and other yeasts associated with the moth Sigelgaita sp, in the cactus Pilosocereus arrabidae of Rio de Janeiro, Brasil. Antonie van Leeuwenhoek 62, 267-272. Rose, A.H., and J.S. Harrison (Eds.). 1987. The Yeasts (5 volumes). Academic Press, London. Rosing, WC. 1987. Ultrastructure of septa, asci, and ascospores of Eremothecium ashbyi. Mycologia 79, 857-865. Rosini, G. 1983. The occurrence of killer characters in yeasts. Can. J. Microbiol. 29, 1462-1464. Rosini, G. 1984. Assessment of dominance of added yeast in wine fermentation and origin of Saccharomyces cerevisiae in wine-making. J. Gen. Appl. Microbiol. 30, 249-256. Rosini, G. 1989. Killer yeasts: notes on properties and technical use of the character. In: C. Cantarelli and G. Lanzarini (Eds.), Biotechnology Application in Beverage Production. Elsevier, Amsterdam, pp. 41-48. Rosini, G., and M. Cantini. 1987. Killer character in Kluyueromyces

997

yeasts: activity on Kloeckera apiculata. FEMS Microbiol. Lett. 44, 81-84. Rosini, G., F. Federici and A. Martini. 1982a. Yeast flora of grape berries during ripening. Microbiol. Ecol. 8, 83-89. Rosini, G., F. Federici, A.E. Vaughan and A. Martini. 1982b. Systematics of species of the yeast genus Saccharomyces associated with the fermentation industry. Eur. J. Appl. Microbiol. Biotechnol. 15, 188193. Rost, K., and H. Venner. 1964. Untersuchungen an Nucleinsauren. X. Isoliemng und Untersuchung von Deoxyribonucleinsaure aus Hefe. Z. Physiol. Chem. 339, 230-237. Rothstein, S.J., CM. Lazarus, WE. Smith, D.C. Baulcombe and A.A. Gatenby. 1984. Secretion of a wheat a-amylase in yeast. Nature 308, 662-665. Rout, M.P., and J.V Kilmartin. 1990. Components of the yeast spindle and spindle pole body. J. Cell Biol. I l l , 1913-1927. Routien, J.B. 1949. Crebrothecium ashbyi. Mycologia 41, 183-185. Rouwenhorst, R.J., L.E. Visser, A. van der Baan, WA. Scheffers and J.P. van der Dijken. 1988. Production, distribution, and kinetic properties of inulinase in continuous cultures of Kluyueromyces marxianus CBS 6556. Appl. Env Microbiol. 54, 1131-1137. Royse, D.J., and B. May. 1982. Use of isozyme variation to identify genotypic classes of Agaricus brunnescens. Mycologia 74, 93-102. Ruinen, J. 1963. The phyllosphere. II. Yeasts from the phyllosphere of tropical foliage. Antonie van Leeuwenhoek 29, 425^38. Ruiz, M. 1938. Contribucion al conocimiento de las levaduras del aguamiel y del pulque. I. Saccharomyces carbajali. Ann. Inst. Biol. (Mexico) 9, 49-80. Ruokola, A.-L., and A. Salonen. 1970. A new fungus, Aureomyces mirabilis gen. et sp. nov, from pine-timber. Mycopathol. Mycol. Appl. 42, 273-276. Rybafova, J., F. Stros and A. Kockova-Kratochvilova. 1980. Candida ethanolica n. sp. Z. Allg. Mikrobiol. 20, 579-581. Rybafova, J., F. Stros and A. Kockova-Kratochvilova. 1981. Torulopsis ethanolitolerans n. sp. and T. ethanolitolerans var. minor n. var. Z. Allg. Mikrobiol. 21, 739-742. Sabouraud, R. 1904. Maladies du cuir chevelu. II. Les maladies desquamatives. Masson & Cie., Paris. Saccardo, PA. 1886. Sylloge Fungorum, Vol. 4, 16. Saccardo, PA. 1889. Sylloge Fungorum, Vol. 8, 1042. Saccardo, PA. 1892. Sylloge Fungorum, Vol. 10. Typis Seminarii, Padua. Saccardo, PA. 1895. Sylloge Fungorum, Vol. 11, pars III, 457. Saccardo, PA. 1906. Sylloge Fungorum, Vol. 18, pars VII. Saccardo, PA., and D. Saccardo. 1906. Sylloge Fungorum 18. Patavii. Saccardo, PA., and P. Sydow. 1902. Sylloge Fungorum, Vol. 16, pars V Saccardo, PA., and A. Trotter. 1911. Sylloge Fungorum 22. Patavii. Sacchetti, M. 1932a. Contributo alia conoscenza della flora microbica di alcuni formaggi italiani. Arch. Mikrobiol. 3, 650-662. Sacchetti, M. 1932b. Interno ad alcuni Zygosaccharomyces. Rend. R. Accad. Naz. Lincei 15, 762-765. Sacchetti, M. 1932c. I lieviti della fermentazione del miele italiano. Mem. R. Accad. Sci. 1st. Bologna, Ser. VIII, 9, 2-11. Sacchetti, M. 1932d. Ricerche sulla fermentazione di un mosto d'uva concentrato. Arch. Mikrobiol. 3, 473^91. Sacchetti, M. 1933. Contributo alia conoscenza della flora microbica di alcuni formaggi italiani. Arch. Mikrobiol. 4, 427^46. Saez, H. 1960. Debaryomyces coudertii, nouvelle espece de levure isolee chez un manchot royal (Aptenodytes patagonica Miller). Bull. Mens. Soc. Linn. Lyon 29, 288-289. Saez, H. 1964. Geotrichum vanriji nouvelle espece de champignon arthrospore isole chez une sarcelle d'ete (Anas querquedula L.). Bull. Mens. Soc. Linn. Lyon 33, 263-267. Saez, H. 1965. Candida krusei (Castellani) Berkhout var. transitoria, nouvelle variete de levure isolee chez divers mammiferes et oiseaux. Bull. Mens. Soc. Linn. Lyon 34, 265-270. Saez, H. 1967. Rhodotorula vuilleminii n. sp., isolee chez un ibis rouge: Guara rubra (L.). BuU. Soc. Mycol. France 83, 953-958.

998

References

Saez, H. 1968a. Etude de quatre champignons arthrospores, formant des endospores. Microbiol. Espagii. 21, 193-204. Saez, H. 1968b. Geotrichum pseudocandidum n. sp., isole chez un cerf d'eld - Rucervus eldi (Guthrie). Mycopath. Mycol. Appl. 34, 359363. Saez, H. 1973a. Candida nouuelii, nouvelle espece de levure rencontree chez deux mammiferes sauvages morts en captivite. Bull. Trimest. Soc. Mycol. Fr. 89, 79-82. Saez, H. 1973b. Cryptococcus hungaricus var. gallicus, nouvelle variete de levure rencontree chez deux cerfs Axis-Axis axis (Erxleben). Bull. Mens. Soc. Linneenne Lyon 42, 216-220. Saez, H. 1977. Trichosporon lutetiae, nouvelle espece de levure isolee chez un cerf d'eld de Thailande. Bull. Mens. Soc. Linn. Lyon 46, 365-367. Saez, H., and T.L. Nguyen. 1989. Leucosporidium lari-marini nouvelle espece de levure isolee chez un oiseau aquatique. Cryptogamie Mycol. 10, 81-85. Saez, H., and L. Rodrigues de Miranda. 1984. The yeast Candida sequanensis sp. nov. Antonie van Leeuwenhoek 50, 379-381. Saez, H., and L. Rodrigues de Miranda. 1988. Deux nouvelles especes de levure, d'origine animale, isolees au Pare Zoologique de Paris: Cryptococcus feraegula et Candida nanaspora. Bull. Soc. Mycol. France 104, 213-215. Saggese, V 1934. Contributo alio studio delle microsi. Un caso clinico di infezione da Mycotorula (Monilia) pinoyi (Cast.) e relative richerche sperimentali. Riv Clin. Pediatr. 32, 941-971. Sahm, H. 1977. Metabolism of methanol by yeasts. Adv. Biochem. Eng. 6, 77-103. Saikawa, M. 1989. Ultrastructure of the septum in Ballocephala verrucospora (Entomophthorales, Zygomycetes). Can. J. Bot. 67, 2484-2488. Saito, K. 1907. Mikrobiologische Studien iiber die Zubereitung des Batatenbranntweines auf der Insel Hachijo (Japan). Zentralbl. Bakteriol. Parasitenkd., Abt. II, 18, 30-37. Saito, K. 1909. Preliminary notes on the spore formation of the so-called "Soya-kahmhefe". Bot. Mag. Tokyo 23, 96. In Japanese. Saito, K. 1910. Notizen iiber einige koreanische Garungsorganismen. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 26, 369-374. Saito, K. 1913. Ein neuer Endomyces (Endomyces lindneri). Z. Garungsphysiol. 2, 151-153. Saito, K. 1914. Mikrobiologische Studien iiber die Bereitung des mandschurischen Branntweins. Rep. Centr. Lab. S. Manchurian Railway Co., 1, 1-60. (Rev in: Bull. Inst. Pasteur, 13, 1, 1915; Zentralbl. Bakteriol. Parasitenkd., Abt. II, 55, 323, 1922.) Saito, K. 1922. Untersuchungen iiber die atmospharischen Pilzkeime. Mitt. Japan. J. Bot. 1, 1-54. Saito, K. 1923. Beschreibung von zwei neuen Hefearten, nebst Bemerkungen uber die Sporenbildung bei Torulaspora delbriicki Lindner. Bot. Mag. Tokyo 37, 63-66. Saito, K. 1932. Uber die in dem in Garung begriffenen Saft vom Cocoanuss befindlichen Pilze. J. Brew. Sci. 10, 11-15. In Japanese. Saito, K., and M. Oda. 1932. Studien iiber die Saccharomyceten in SakeMoto. I, III. J. Brew. Sci. 10, 787-802. In Japanese. Saito, K., and M. Oda. 1934. Investigation of the yeasts in sake-moto. III. J. Brew. Sci. 12, 159-174. In Japanese. Saito, K., and Y. Ohtani. 1931. On some fermentative yeasts isolated from sap exuded from bark of a tree. Jozogaku Zasshi 9, 6-11. In Japanese. Saitou, N., and T. Imanishi. 1989. Relative efficiencies of the FitchMargoliash, maximum-parsimony, maximum-likelihood, minimumevolution, and neighbor-joining methods of phylogenetic tree construction in obtaining the correct tree. Mol. Biol. Evol. 6, 514-525. Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4, 4 0 6 425. Sakagami, Y., A. Isogai, A. Suzuki, S. Tamura, E. Tsuchiya and S. Fukui. 1978a. Isolation of a novel sex hormone, Tremerogen A-10,

controlling conjugation tube formation in Tremella mesenterica Fries. Agric. Biol. Chem. 42, 1093-1094. Sakagami, Y, A. Isogai, A. Suzuki, S. Tamura, E. Tsuchiya and S. Fukui. 1978b. Amino acid sequence of Tremerogen A-10, a peptidal hormone inducing conjugation tube formation in Tremella mesenterica Fries. Agric. Biol. Chem. 42, 1301-1302. Sakagami, Y, A. Isogai, A. Suzuki, S. Tamura, C. Kitada and M. Fujino. 1979. Structure of Tremerogen A-10, a peptidal hormone inducing conjugation tube formation in Tremella mesenterica. Agric. Biol. Chem. 43, 2643-2645. Sakai, H., and G.A. Caldo. 1985. Microbiological studies on Bubod, a fermentation starter in the Philippines III. A new yeast species, Endomycopsis bubodii Sakai and Caldo sp. nov, and some enzymological properties of Endomycopsis strains. Philipp. Agric. 68, 181-188. Salas, S.D., I E . Bennett, K.J. Kwon-Chung, J.R. Perfect and PR. Williamson. 1996. Effect of the laccase gene, CNLACI, on virulence of Cryptococcus neoformans. J. Exp. Med. 184, 377-386. Salkin, I., and M.A. Gordon. 1977. Polymorphism of Malassezia furfur Can. J. Microbiol. 23, 471-475. Salkin, I.E, M.A. Gordon, W.A. Samsonofif and C.L. Rieder. 1985. Blastoschizomyces capitatus, a new combination. Mycotaxon 22, 3 7 5 380. Salvat, P., and M. Fontoynont. 1922. Contribution a I'etude des mycoses malgaches. Abces sous-dermiques dus a VEndomyces molardi (n. sp.). Bull. Soc. Pathol. Exotique 15, 311-320. Sampaio, J.R 1994. Utilization of low molecular weight lignin-related aromatic compounds for the selective isolation of yeasts: Rhodotorula uanillica, a new basidiomycetous yeast species. Syst. Appl. Microbiol. 17, 613-619. Sampaio, J.P, and A. Fonseca. 1995. Physiological aspects in the systematics of heterobasidiomycetous yeasts. Stud. Mycol. 38, 29-46. Sampaio, J.P, and N. van Uden. 1991. Rhodotorula ferulica sp. nov, a yeast that degrades ferulic acid & other phenolic compounds. Syst. Appl. Microbiol. 14, 146-149. Samson, R.A., J.A. Stalpers and A.C.M. Weijman. 1983. On the taxonomy of the entomogenous fungus Filobasidiella arachnophila. Antonie van Leeuwenhoek 49, 4 4 7 ^ 5 6 . Sancholle, M., R. Dargent, J.D. Weete, A.E. Rushing, K.S. Miller and C. Montant. 1988. Effects of triazoles on fungi. VI. Ultrastructure of Taphrina deformans. Mycologia 80, 162-175. Sand, F.E.M.J. 1973. Recent investigations on the microbiology of fruit juice concentrates. Proc. Int. Fruit Juice Union, Vienna, pp. 185-216. Sanderson, G.W., and S.O. Jolly. 1994. The value of Phaffia yeast as a feed ingredient for salmonid fish. Aquaculture 124, 193-200. Sandhu, R.S., and H.S. Randhawa. 1962. On the reisolation and taxonomic study of Candida uiswanathii Viswanathan et Randhawa 1959. Mycopathol. Mycol. Appl. 18, 179-183. Sanfelice, F. 1894. Contributo alia morphologia e biologia dei blastomiceti che si sviluppano nei succhi di alcuni fintti. Ann. 1st. Ig. R. Univ Roma 4, 4 6 3 ^ 6 9 . Sanfelice, F. 1895a. Sull'azione patogene dei blastomiceti. Ann. 1st. Ig. R. Univ Roma 5, 239-262. Sanfelice, F. 1895b. Uber einen neuen pathogenen Blastomyceten, welcher innerhalb der Gewebe unter Bildung kalkartig aussehender Massen degeneriert. Zentralbl. Bakteriol. Parasitenkd., Abt. I, 18, 5 2 1 526. Sanger, F, S. Nicklen and A.R. Coulson. 1977. DNA sequencing with chain-terminating inhibitors. Proc. Natl. Acad. Sci. USA 74, 54635467. Santa Maria, J. 1956a. Hansenula matritensis nov. spec. An. Inst. Nac. Invest. Agron. 5, 151-162. Santa Maria, J. 1956b. Saccharomyces fragilis Jorgensen var. bulgaricus nov. var. An. Inst. Nac. Invest. Agron. 5, 163-165. Santa Maria, J. 1956c. Pichia membranaefaciens Hansen var. sicereum nov. var. An. Inst. Nac. Invest. Agron. 5, 167-170. Santa Maria, J. 1957. Un nuevo genero de levaduras: Citeromyces. Inst. Nac. Invest. Agron., Seccion Bioquimica, Cuaderno no. 258, 269-276.

References Santa Maria, J. 1958a. Ecologia de las levaduras. I. Nuevas especies aisladas de alpechin. Bol. Inst. Nac. Invest. Agron. 38, 301-313. Santa Maria, J. 1958b. Sporobolomyces marcillae nov. spec, isolated from the air. Arch. Mikrobiol. 32, 29-31. Santa Maria, J. 1959a. Oxidacion de alcohol etilico a acido acetico por levaduras vivas. I. Saccharomyces aceti nov. spec, y Saccharomyces oxidans nov. spec, nuevas especies aisladas de vino. An. Inst. Nac. Invest. Agron. 8, 715-735. Santa Maria, J. 1959b. Ecologia de las levaduras. II. Levaduras del asucar, de la ciche condensada y de la remolache. An. Inst. N a c Invest. Agron. 8, 779-796. Santa Maria, J. 1959c Candida atmosphaerica, nov. spec, aislada del aire. An. Inst. Nac. Invest. Agron. 8, 799-802. Santa Maria, J. 1960. Taxonomy of yeasts. Nature 185, 781-782. Santa Maria, J. 1962. Saccharomyces hienipiensis, a new melibiosefermenting yeast, unable to assimilate raffinose. J, Gen. Microbiol. 28, 375-378. Santa Maria, J. 1963a. New melibiose-utilizing yeasts isolated from "alpechin". Antonie van Leeuwenhoek 29, 329-343. Santa Maria, J. 1963b. Sobre la validez del genero "Torulaspora" (Lindner) en las levaduras ascosporigenas. Bol. Inst. Nac. Invest. Agron. 49, 257-266. Santa Maria, J. 1964. Saccharomyces onubensis, nov. spec, aislada de mosto de uva, y su relacion con Sacch. capensis (synom. Sacch. ouiformis). Bol. Inst. Nac. Invest. Agron. 51, 527-536. Santa Maria, J. 1966. Characteristics delimiting the genus Pichia Hansen. Antonie van Leeuwenhoek 32, 197-201. Santa Maria, J. 1968. Saccharomyces hispanica nov. spec. Nueva especie de levadura de "Flor". Bol. Inst. Nac. Invest. Agron. 58, 21-32. Santa Maria, J. 1970. Saccharomyces gaditensis y Saccharomyces cordubensis, dos nuevas especies de levaduras de "flor". Bol. Inst. Nac. Invest. Agron. 62, 57-66. Santa Maria, J. 1971. Candida ergatensis nov. spec. An. Inst. Nac. Invest. Agron. 1, 85-88. Santa Maria, J. 1978. Biotaxonomic studies on yeast. Common. Inst. Nac. Invest. Agron., Serie General 3, 1-61. Santa Maria, J., and C. Garcia Aser. 1970. Pichia castillae, nov. spec, aislada de insectos. Bol. Inst. N a c Invest. Agron. 62, 51-55. Santa Maria, J., and C. Garcia Aser. 1971. Debaryomyces yarrowii nov. spec. An. Inst. Nac. Invest. Agron., Serie General 1, 89-92. Santa Maria, J., and C. Garcia Aser. 1977. Pichia segobiensis, sp. nov. An. Inst. N a c Invest. Agron., Serie General 5, 45-50. Santa Maria, J., and C. Sanchez. 1970. Significacion taxonomica de las propriedades fisiologicas de las especies incluidas en el genero Kluyveromyces. Bol. Inst. Nac. Invest. Agron. 62, 23-36. Sartory, A. 1923. Champignons parasites de I'homme et des animaux. In: National Union Catalog Pre-1956 Imprints, Vol. 521, p. 247. Sartory, A., G. Petges and H. Claque. 1923. Laryngite chronique pseudo-tuberculeuse d'origine mycosique due a une levure nouvelle, Cryptococcus laryngitidis n. sp. C.R. Seances Mem. Soc Biol. 84, 179-180. Sartory, A., R. Sartory, G. Hufschmitt and J. Meyer. 1930. Etude d'un Cryptococcus nouveau (Cryptococcus corallinus) isole de lesions rappelant les lesions trichophytiques. C.R. Soc. Biol. 104, 1316-1319. Sartory, A., R. Sartory and J. Meyer. 1931. Etude botanique d'une nouvelle levure rose (Cryptococcus radiatus n. sp.). C.R. Soc. Biol. 106, 597-600. Sartory, A., R. Sartory, J. Weill and J. Meyer. 1932. Un cas de blastomycose inveteree transmissible au cobaye, due a un Saccharomyces pathogene (Saccharomyces jadini n. sp.). C.R. Acad. Sci. 194, 1688-1690. Sarukhanyan, F.G. 1957. New species and strains of sporogenous and asporogenous yeasts. Izv. Akad. Nauk Armyanskoi SSR. Ser. Biol. Sel'skokhozyaistvennye Nauki 10, 61-67. Sasakawa, M. 1922. Zur Systematik pathogener und parasitischer Hefen. Morphologisch-biochemische Studie. Zentralbl. Bakteriol. Parasitenkd., Abt. I, Orig. 88, 269-285.

999

Sasaki, Y., and T. Yoshida. 1958. Hansenula misumaiensis Sasaki et Yoshida. Abstr. Hokkaido Branch Mtg., Agric Chem. Soc. Japan. Sasaki, Y, and T. Yoshida. 1959. A taxonomic reconsideration of lactose fermenting yeast preserving in Japan. Mem. Fac Agric. Hokkaido Univ 3, 178-184. Sasaki, Y, and T. Yoshida. 1966. Microbiological studies of soya mashes in Hokkaido. (I) A taxonomic study and distribution of yeasts. J. Ferment. Technol. 44, 61-71. Sasek, V, and G.E. Becker. 1969. Effect of different nitrogen sources on the cellular form of Trigonopsis variabilis. J. Bacteriol. 99, 891-892. Savile, D.B.O. 1955. A phylogeny of the basidiomycetes. Can. J. Bot. 33, 60-104. Savile, D.B.O. 1968. Possible interrelationships between fungal groups. In: G.C. Ainsworth and A.S, Sussman (Eds.), The Fungi, an Advanced Treatise, Vol. 3. Academic Press, New York, pp. 649-675. Sawada, K. 1922. Descriptive Catalogue of the Formosan Fungi 3, 53. Sawant, A.D., A.T. Abdelal and D.G. Ahearn. 1988. Anti-Candida activity of Pichia anomala as determined by a growth rate reduction assay. Appl. Environm. Microbiol. 54, 1095-1103. Sawant, A.D., A.T. Abdelal and D.G. Ahearn. 1989. Purification and characterization of the anti-Candida toxin of Pichia anomala WC 65. Antimicrob. Agents Chemother. 33, 48-52. Scaramella, P. 1928. Richerche preliminari su una nuova forma di 'Mycotorula' a pigmento rosa-rosso. Nuovo G. Bot. Ital. Ser. 5, 35, 546-554. Scarr, M.P., and D. Rose. 1966. Study of osmophilic yeasts producing invertase. J. Gen. Microbiol. 45, 9-16. Schachner, J. 1929. Trigonopsis variabilis nov. gen. et spec. Z. Gesamte Brauwes. 52, 137-142. Scheda, R. 1966. Merkmalsveranderungen bei Hefen der Gattung Saccharomyces. Monatsschr. Brau. 19, 256-258. Scheda, R., and D. Yarrow. 1966. The instability of physiological properties used as criteria in the taxonomy of yeasts. Arch. Mikrobiol. 55, 209-225. Scheda, R., and D. Yarrow. 1968. Variation in the fermentative pattern of some Saccharomyces species. Arch. Mikrobiol. 61, 310-316. Scheflfers, W.A. 1966. Stimulation of fermentation in yeasts by acetoin and oxygen. Nature 210, 533-534. Schekman, R., and P. Novick. 1982. The secretory process and yeast cell-surface assembly. In: J.N. Strathern, E.W. Jones and J.R. Broach (Eds.), The Molecular Biology of the Yeast Saccharomyces. Cold Spring Harbor Monograph Ser IIB, pp. 361-393. Schellenberg, D., A. Bonington, C M . Champion, R. Lancaster, S. Webb and J. Main. 1994. Treatment of Clostridium difficile with brewers yeast. Lancet 343, 171-172. Scherwitz, C , R. Martin and H. Ueberberg. 1978. Ultrastructural investigations of the formation of Candida albicans germ tubes and septa. Sabouraudia 16, 115-124. Schildkraut, C.L., J. Marmur and P. Doty. 1962. Determination of the base composition of deoxyribonucleic acid from its buoyant density. J. Mol. Biol. 4, 4 3 0 ^ 3 3 . Schimon, O. 1911. Beitrage zur Kenntnis rot gefarbter niederer Pilze, Thesis. Miinchen. Schionning, H. 1903. Nouveau genre de la famille des Saccharomycetes. C.R. Trav Lab. Carlsberg 6, 101-125. Schippers-Lammertse, A.F., and C. Heyting. 1962. Physiological properties, conjugation and taxonomy of Cephaloascus fragrans Hanawa 1920 (Syn.: Ascocybe grovesii Wells 1954). Antonie van Leeuwenhoek 28, 5-16. Schmidt, A.L., C.R. Curtis and G.A. Bean. 1977. Electrophoretic comparison of mycelial enzymes from aflatoxin-producing and nonproducing strains of Aspergillus flavus and Aspergillus parasiticus. Can. J. Microbiol. 23, 60-67. Schmitt, M., and F. Radler. 1987. Mannoprotein of the yeast cell wall as primary receptor for the killer toxin of Saccharomyces cerevisiae strain 28. J. Gen. Microbiol. 133, 3347-3354. Schmitt, M., and F. Radler. 1988. Molecular structure of the cell

1000

References

wall receptor for killer toxin KT28 in Saccharomyces cerevisiae. J. Bacteriol. 170, 2192-2196. Schmitt, M., and D.J. Tipper. 1990. K28, a unique double-stranded RNA killer virus of Saccharomyces cerevisiae. Mol. Cell. Biol. 10, 48074815. Schmitt, M., M. Brendel, R. Schwarz and F. Radler. 1989. Inhibition of DNA synthesis in Saccharomyces cerevisiae by yeast killer toxin KT28. J. Gen. Microbiol. 135, 1529-1535. Schnegg, H., and F. Oehlkers. 1922. Saccharomyces odessa nov. spec. Z. Gesamte Brauwes. 45, 92-96, 106-107, 111-113. Schneider, A. 1917. Further note on a parasitic Saccharomycete of the tomato. Phytopathology 7, 52-53. Schneider, H.R, Y. Wang, Y.K. Chan and R. Maleszka. 1981. Conversion of D-xylose into ethanol by the yeast Pachysolen tannophilus. Biotechnol. Lett. 3, 89-92. Schoellhom, K. 1919. Sur la fermentation de quelques levures des nectars des plantes d'hiver. Bull. Soc. Bot. Geneve 11, 154-190. Schroeter, J. 1889. Pilze. In: F. Cohn (Ed.), Kryptogamen-Flora von Schlesien, vol. 3, Erste Halfte. Kern, Breslau. Schroeter, J. 1908. Pilze. In: F. Cohn (Ed.), Kryptogamen-Flora von Schlesien, Vol. 3, Zweite Halfte. Kern, Breslau. Schultz, B.E., G. Kraepelin and W. Hinkelmann. 1974. Factors affecting dimorphism in Mycotypha (Mucorales), a correlation with the fermentation/respiration equilibrium. J. Gen. Microbiol. 82, 1-13. Schumacher, T., and L. Ryvarden. 1981. Dipodascus polyporicola nov. sp., a parasitic Hemiascomycete on Piptoporus soloniensis (Fr.) Pil. Mycotaxon 12, 525-530. Schweizer, C. 1921. Etudes sur la fermentation des cerises. Levures du genre Saccharomyces isolees de macerations de cerises. Ann. Inst. Pasteur 35, 820-833. Scott, D.B., and J.P van der Walt. 1970a. Hansenula sydowiorum sp. n. Antonie van Leeuwenhoek 36, 4 5 ^ 8 . Scott, D.B., and J.P. van der Walt. 1970b. Three new yeasts from South African insect sources. Antonie van Leeuwenhoek 36, 389-396. Scott, D.B., and J.P. van der Walt. 1971a. Hansenula dryadoides sp. n., a new species from South African insect sources. Antonie van Leeuwenhoek 37, 171-175. Scott, D.B., and J.P. van der Walt. 1971b. Pichia cicatricosa sp. n., a new auxiliary ambrosia fungus. Antonie van Leeuwenhoek 37, 177-183. Scott, WJ. 1936. The growth of micro-organisms on ox muscle 1. The influence of water content of substrate on rate of growth at -1°C. Council Sci. Ind. Research 9, 177-190. Scrivani, P. 1939. Ricerche sui microorganismi produttori della fioretta nel vino. Arch. Mikrobiol. 10, AA6-A12. Seeliger, H.P.R. 1956. Use of a urease test for the screening and identification of cryptococci. J. Bacteriol. 72, 127-131. Seidler, R.J., and M. Mandel. 1971. Quantitative aspects of deoxyribonucleic acid renaturation: base composition, state of chromosome replication, and polynucleotide homologies. J. Bacteriol. 106, 608-614. Seidler, R.J., M.D. Knittel and C. Brown. 1975. Potential pathogens in the environment. Cultural reactions and nucleic acid studies on Klebsiella pneumoniae from chemical and environmental sources. Appl. Microbiol. 29, 819-825. Seifert, K., F. Oberwinkler and R.J. Bandoni. 1992. Notes on Stilbum vulgare and Fibulostilbum phylacicola gen. et sp. nov. (Atractiellales). Bol. Soc. Argent. Bot. 28, 213-217. Semenova, S.A., and W.I. Golubev. 1986. Pedogamic conjugation in the yeast Nadsonia commutata. Mikrobiologiya 55, 765-767. Semenova, S.A., and W.I. Golubev. 1988. Characteristics and localization of a pigment from Nadsonia commutata ascospores. Mikrobiologiya 57, 664-668. Senez, A. 1918. El ''Endomices pulmonalis". Bol. Lab. Bacteriol. Tucuman 1, 58-80. Sentheshanmuganathan, S., and W.J. Nickerson. 1962. Nutritional control of cellular form in Trigonopsis variabilis. J. Gen. Microbiol. 27, 4 3 7 449.

Sesma, B., and C. Ramirez. 1978. A new species of Blastobotrys: Blastobotrys navarrensis sp. nov. (Hyphomycetes). Mycopathologia 63, 4 1 45. Seyfert, R. 1927. Uber Schnallenbildung im Paarkemmycel der Brandpilz. Z. Bot. 19, 577-601. Seymour, FR., M.E. Slodki, R.D. Plattner and R.M. Stodola. 1976. Methylation and acetolysis of extracellular D-mannans from yeast. Carbohydr. Res. 48, 225-237. Shadomy, H.J. 1970. Clamp connections in two strains of Cryptococcus neoformans. In: D.G. Ahearn (Ed.), Recent Trends in Yeast Research, Vol. I, Spectrum. Georgia State University, Atlanta, GA, pp. 67-72. Shann, C. 1988. Correlazione tra sistemi ecologici nel marciume acido delle uve. Atti Accad. Ital. Vite Vino 39, 333-355. Shaw, C.E., and L. Kapica. 1972. Production of diagnostic pigment by phenoloxidase activity of Cryptococcus neoformans. Appl. Microbiol. 24, 824-830. Shaw, F W 1926. A new species of Monilia pathogenic for man. Science 64, 300. Shchelokova, I.F. 1964. Yeasts and yeast-like ftingi in silages. Mikrobiol. Zh. 26, 20-25. In Russian. Shehata, E.T.A.M. 1960. Yeasts isolated from sugar-cane and its juice during the production of Aguardente de Cana. Appl. Microbiol. 8, 73-75. Shehata, E.T.A.M., and E.M. Mrak. 1952. Intestinal yeast floras of successive populations of Drosophila. Evolution 6, 325-332. Shehata, E.TA.M., E.M. Mrak and H.J. Phaff. 1955. Yeasts isolated from Drosophila and fi-om their suspected feeding places in southern and central California. Mycologia 47, 799-811. Shen, R., and M.-A. Lachance. 1993. Phylogenetic study of ribosomal DNA of cactophilic Pichia species by restriction mapping. Yeast 9, 315-330. Shepherd, H.S., J.M. Ligon, PL. Bolen and C.R Kurtzman. 1987. Cryptic DNA plasmids of the heterothallic yeast Saccharomycopsis crataegensis. Curr. Genet. 12, 297-304. Shepherd, M.S., and PA. Sullivan. 1976. The production and growth characteristics of yeast and mycelial forms of Candida albicans in continuous culture. J. Gen. Microbiol. 93, 361-370. Shields, A.B., and L. Ajello. 1966. Medium for selective isolation of Cryptococcus neoformans. Science 151, 208. Shifrine, M., and H.J. Phaff. 1956. The association of yeasts with certain bark beetles. Mycologia 48, 41-55. Shifrine, M., and H.J. Phaff. 1959. Nutritional requirements of Saccharomycopsis guttulata (Robin) Schionning. Mycologia 51, 318328. Shifrine, M., H.J. Phaff and A.L. Demain. 1954. Determination of carbon assimilation patterns of yeasts by replica plating. J. Bacteriol. 68, 2 8 35. Shin, K.S., S.D. Hong and K.S. Bae. 1996. The significance of ITS-RFLPS and coenzyme-Q system in determining taxonomic relationships among Candida species. J. Gen. Appl. Microbiol. 42, 481-491. Shivas, R.G., and L. Rodrigues de Miranda. 1983a. Cryptococcus phylloplanus and Cryptococcus hinnuleus, two new yeast species. Antonie van Leeuwenhoek 49, 153-158. Shivas, R.G., and L. Rodrigues de Miranda. 1983b. Two new species of the genus Sporobolomyces and a new Rhodotorula species from leaf surfaces. Antonie van Leeuwenhoek 49, 159-166. Siciliano, M.J., and C.R. Shaw. 1976. Separation and visualization of enzymes on gels. In: I. Smith (Ed.), Chromatographic and Electrophoretic Techniques, 4th edn., Vol. 2. William Heinemann Medical Books, London, pp. 185-209. Sidenberg, D.G., and M.A. Lachance. 1983. Speciation, species delineation, and electrophoretic isoenzyme patterns of the type strains of Kluyveromyces van der Walt emend, van der Walt. Int. J. Syst. Bacteriol. 33, 822-828. Sidenberg, D.G., and M.A. Lachance. 1986. Electrophoretic isoenzyme variation in Kluyveromyces populations and revision of Kluyveromyces marxianus (Hansen) van der Walt. Int. J. Syst. Bacteriol. 36, 94-102.

References Sieburth, J.M. 1979. Sea Microbes. Oxford University Press, New York, 491pp. Siepmann, R., and W. Hohnk. 1962. Uber Hefen und einige Pilze (Fungi imp., Hyphales) aus dem Nordatlantik. Veroff. Inst. Meeresforsch. Bremerhaven 8, 79-97. Sierra, G. 1957. A simple method for the detection of lipolytic activity of micro-organisms and some observations on the influence of the contact between cells and fatty substances. Antonie van Leeuwenhoek 23, 15-22. Sietsma, J.H., and J.G.H. Wessels. 1990. The occurrence of glucosaminoglycan in the cell wall of Schizosaccharomyces pombe. J. Gen. Microbiol. 136, 2261-2265. Sigler, L., A. Tsuneda and J.W. Carmichael. 1981. Phaeotheca and Phaeosclera, two new genera of dematiaceous Hyphomycetes and a redescription of Sarcinomyces Lindner. Mycotaxon 12, 4 4 9 ^ 6 7 . Silverman, L. 1987. Current methods for Saccharomyces cerevisiae. Anal. Biochem. 164, 271-277. Simard, R.E., and A.C. Blackwood. 1971. Yeasts of the St. Lawrence River. Can. J. Microbiol. 17, 197-203. Simione, F.R., and S.A. Meyer. 1978. Genetic relatedness between some physiologically similar Candida species with high GC contents. Abstr. Ann. Meet. Am. Soc. Microbiol., p. 81. Simmons, R.B. 1989. Comparison of chitin localization in Saccharomyces cerevisiae, Cryptococcus neoformans, and Malassezia spp. Mycol. Res. 93, 551-553. Simmons, R.B., and D.G. Aheam. 1985. Ascospore ornamentation in Saccharomycodes ludwigii. Mycologia 77, 660-662. Simmons, R.B., and D.G. Ahearn. 1987. Cell wall ultrastructure and diazonium blue B reaction of Sporopachydermia quercuum, Bullera tsugae, and Malassezia spp. Mycologia 79, 3 8 ^ 3 . Simmons, R.B., and E. Gueho. 1990. A new species of Malassezia. Mycol. Res. 94, 1146-1149. Sinclair, N.A., and S.L. Stokes. 1965. ObHgately psychrophilic yeasts from the polar regions. Can. J. Microbiol. 11, 259-269. Singh, R., and R.E. Kunkee. 1977. Multiplicity and control of alcohol dehydrogenase isozymes in various strains of wine yeasts. Arch. Microbiol. 114,255-259. Sipiczki, M. 1979. Interspecific protoplast fusion in fission yeasts. Curr. Microbiol. 3, 3 7 ^ 0 . Sipiczki, M., J. Kucsera, S. Ulaszewski and J. Zsolt. 1982. Hybridization studies by crossing and protoplast fusion within the genus Schizosaccharomyces Lindner. J. Gen. Microbiol. 128, 1989-2000. Sirawaraporn, W., M. Cao, D.V Santi and J.C. Edman. 1993. Cloning, expression, and characterization of Cryptococcus neoformans dihydrofolate reductase. J. Biol. Chem. 268, 8888-8892. Skinner, C.E. 1947a. The yeast-like fiingi: Candida and Brettanomyces. Bacteriol. Rev 11, 227-274. Skinner, C.E. 1947b. Morphology and classification of the yeasts and yeast-like fiingi. In: Henrici's Molds, Yeasts, and Actinomycetes, 2nd edn. Wiley, New York, pp. 264-304. Skinner, C.E. 1950. Generic name for imperfect yeasts, Cryptococcus or Torulopsis? Am. Midi. Nat. 43, 242-250. Skipper, N., and H. Bussey 1977. Mode action of yeast toxin: energy requirement for Saccharomyces cerevisiae killer toxin. J. Bacteriol. 129, 668-677. Slininger, P.J., R.J. Bothast, J.E. VanCauwenberge and C.P. Kurtzman. 1982, Conversion of D-xylose to ethanol by the yeast Pachysolen tannophilus. Biotechnol. Bioeng. 24, 371-384. Slininger, P.J., P.L. Bolen and C.P. Kurtzman. 1987. Pachysolen tannophilus: properties and process considerations for ethanol production from D-xylose. Enzyme Microb. Technol. 9, 5-15. Slodki, M.E., and M.C. Cadmus. 1978. Production of microbial polysaccharides. Adv. Appl. Microbiol. 23, 19-54. Slodki, M.E., and L.J. Wickerham. 1966. Extracellular polysaccharides and classification of the genus Lipomyces. J. Gen. Microbiol. 42, 3 8 1 385. Slodki, M.E., L.J. Wickerham and R.J. Bandoni. 1966. Extracellular

1001

heteropolysaccharides from Cryptococcus and Tremella: a possible taxonomic relationship. Can. J. Microbiol. 12, 4 8 9 ^ 9 4 . Slodki, M.E., R.M. Ward, J.A. Boundy and M.C. Cadmus. 1972. Extracellular mannans and phosphomannans: Structural and biosynthetic relationships. In: G. Terui (Ed.), Fermentation Technology Today, Proc. IV Int. Ferment. Symp., Soc. Ferment. Technol., Osaka, Japan, pp. 597-601. Sloofif, WCh. 1964. Mating types in Pichia membranaefaciens. Antonie van Leeuwenhoek 30, 129-131. Slooff, WCh. 1970a. Lipomyces Lodder et Kreger-van Rij. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 3 7 9 ^ 0 2 . Slooff, WCh. 1970b. Schizosaccharomyces Lindner. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 733-755. Slooff, WCh. 1970c. Pityrosporum Sabouraud. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 1167-1186. Slooff, WCh. 1970d. Trigonopsis Schachner. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 1353-1357. Smit, J. 1934. Uber die Ursachen des Aufblahens von Belebtschlamm. Arch. Mikrobiol. 5, 550-560. Smit, J., and L. Meyers. 1928. Oospora gigas n. sp. Ned. Tijdschr. Hyg. Microbiol. Serol. 2, 85-92. Smith, D., and H.O, Halvorson. 1967. The isolation of DNA from yeast. In: L. Grossman and K. Moldave (Eds.), Methods in Enzymology, Vol. 12, part A. Academic Press, New York, pp. 538-541. Smith, J.E., and J.G. Anderson. 1973. Differentiation in the aspergilli. Symp. Soc. Gen. Microbiol. (Microbial Differentiation) 23, 295-337. Smith, M.Th. 1973. Centraalbureau voor Schimmelcultures, Baarn and Delft. Progress Report 1972. Verb. K. Ned. Akad. Wetensch., Afd. Natuurk. 61, 59-81. Smith, M.Th. 1974. Hanseniaspora occidentalis sp. nov. Antonie van Leeuwenhoek 40, AA\-AAA. Smith, M.Th. 1984. Hanseniaspora Zikes. In: N.J.W Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 154-164. Smith, M.Th. 1986. Zygoascus hellenicus gen. nov., sp. nov, the teleomorph of Candida hellenica (= C. inositophila = C. steatolytica). Antonie van Leeuwenhoek 52, 25-37. Smith, M.Th., and WH. Batenburg-van der Vegte. 1984. Ascospore morphology and ultrastructure of species assigned to the genus Lipomyces Lodder et Kreger-van Rij. Int. J. Syst. Bacteriol. 34, 80-86. Smith, M.Th., and WH. Batenburg-van der Vegte. 1985. Ultrastructure of septa in Blastobotrys and Sporothrix. Antonie van Leeuwenhoek 51, 121-128. Smith, M.Th., and WH. Batenburg-van der Vegte. 1986a. Pichia triangularis sp. nov, the teleomorph of Candida polymorpha Ohara et Nonomura, nom. nud. Antonie van Leeuwenhoek 52, 4 3 7 ^ 4 3 . Smith, M.Th., and WH. Batenburg-van der Vegte. 1986b. Additional information on the ultrastructure in the genus Sporothrix. J. Gen. Appl. Microbiol. 32, 549-552. Smith, M.Th., and G.A. Poot. 1985. Conspecificity of Hanseniaspora nodinigri and Hanseniaspora vineae: comparison by DNA reassociation. Antonie van Leeuwenhoek 51, 151-153. Smith, M.Th., and A.M. van Grinsven. 1984. Dekkera anomala sp. nov, the teleomorph of Brettanomyces anomalus recovered from spoiled soft drinks. Antonie van Leeuwenhoek 50, 143-148. Smith, M.Th., J.P. van der Walt and E. Johannsen. 1976. The genus Stephanoascus gen. nov. (Ascoideaceae). Antonie van Leeuwenhoek 42, 119-127. Smith, M.Th., F.P. Simione and S.A. Meyer. 1977. Kloeckera apis sp. nov; the imperfect state of Hanseniaspora guilliermondii Pijper. Antonie van Leeuwenhoek 43, 219-223. Smith, M.Th., WH. Batenburg-van der Vegte and WA. Scheffers. 1981. Eeniella, a new genus of the Torulopsidales. Int. J. Syst. Bacteriol. 31, 196-203.

1002

References

Smith, M.Th., G.A. Foot and T. KuU. 1989a. Segregation of Candida pseudolambica sp. nov. from Candida lambica and closely related species by deoxyribonucleic acid relatedness. Stud. Mycol. 31, 1 7 1 176. Smith, M.Th., J.P. van der Walt, Y. Yamada and W.H. Batenburg-van der Vegte. 1989b. Zygozyma suomiensis, sp. nov. (Lipomycetaceae), a new species from Finland. Antonie van Leeuwenhoek 56, 283-288. Smith, M.Th., G.A. Foot and W.H. Batenburg-van der Vegte. 1990a. Genome comparison among species of the genus Arthroascus von Arx. Antonie van Leeuwenhoek 58, 249-253. Smith, M.Th., M. Yamazaki and G.A. Foot. 1990b. Dekkera, Brettanomyces and Eeniella: electrophoretic comparison of enzymes and DNA-DNA homology Yeast 6, 299-310. Smith, M.Th., C. Shann, WH. Batenburg-van der Vegte, R. Schmitt, E. Wehrli, H.J. Roeijmans and G.W. van Eijk. 1992. Botryozyma nematodophila gen. nov., spec. nov. (Candidaceae). Antonie van Leeuwenhoek 61, 277-284. Smith, M.Th., G.A. Foot, W.H. Batenburg-van der Vegte and J.F. van der Walt. 1995a. Species delimitation in the genus Lipomyces by nuclear genome comparison. Antonie van Leeuwenhoek 68, 75-87. Smith, M.Th., J.F. van der Walt and W.H. Batenburg-van der Vegte. 1995b. Babjevia gen. nov. - a new genus of the Lipomycetaceae. Antonie van Leeuwenhoek 67, 177-179. Smith, M.Th., A.WA.M. de Cock, G.A. Foot and H.Y Steensma. 1995c. Genome comparisons in the yeast-like fiingal genus Galactomyces Redhead et Malloch. Int. J. Syst. Bact. 45, 826-831. Sneath, F.H.A., and R.R. Sokal. 1973. Numerical taxonomy, the principle and practice of numerical classification. WH. Freeman, San Francisco, p. 573. Snell, W.H., and E.A. Dick. 1957. A Glossary of Mycology. Harvard University Fress, Cambridge, MA, p. 148. Snider, R., and C.L. Kramer. 1974a. Folyacrylamide gel electrophoresis and numerical taxonomy of Taphrina caerulescens and T. deformans. Mycologia 66, 750-753. Snider, R., and C.L. Kramer. 1974b. An electrophoretic protein analysis and numerical taxonomy of Taphrina. Mycologia 66, 754-772. Socias Amoros, A., C. Ramirez Gomez and R. Genestar Serra. 1954a. Una nueva especie de Endomycopsis: Endomycopsis balearica nov. sp. Aislada de concentrado de tanino de encina. Microbiol. Esp. 7, 107-110. Socias Amoros, A., C. Ramirez Gomez and F. Felaez Campomanes. 1954b. Una nueva especie de Debaryomyces: el Debaryomyces toletanus nov. sp. Microbiol. Esp. 7, 111-114. Soil, D.R. 1986. The regulation of cellular differentiation in the dimorphic yeast Candida albicans. BioEssays 5, 5-11. Soil, D.R., M. Stasi and G. Bedell. 1978. The regulation of nuclear migration and division during pseudo-mycelum outgrowth in the dimorphic yeast Candida albicans. Exp. Cell Res. 116, 207-215. Solomon, S.L., R.R Khabbaz, R.H. Farker, R.L. Anderson, M.A. Geraghty, R.M. Furman and W.J. Martone. 1984. An outbreak of Candida parapsilosis bloodstream infections in patients receiving parenteral nutrition. J. Infect. Dis. 149, 98-102. Sommerfelt, S.C. 1826. Supplementum Florae Lapponicae. Christiania, p. 306. (From: Torkelsen, A.-E., 1968. The genus Tremella in Norway. Nytt. Mag. Bot. 15, 225-239.) Sonck, C.E. 1974. Candida savonica sp. nov. Antonie van Leeuwenhoek 40, 543-545. Sonck, C.E., and D. Yarrow. 1969. Two new yeast species isolated in Finland. Antonie van Leeuwenhoek 35, 172-177. Sone, H., T. Fujii, K. Kondo, F. Shimizu, J.-I. Tanaka and T. Inoue. 1988. Nucleotide sequence and expression of Enterobacter aerogenes alphaacetolactate decarboxylase gene in brewers' yeast. Appl. Environ. Microbiol. 54, 3 8 ^ 2 . Soneda, M. 1959. Studies on animal-dung inhabiting yeasts. Nagaoa, Mycol. J. Nagao Inst. 6, 1-24. Soneda, M. 1960. On a new yeast genus Wickerhamia. Nagaoa, Mycol. J. Nagao Inst. 7, 9-13. Soneda, M. 1962. An additional paper on animal-dung inhabiting yeasts

and on the symbiosis with an amoeba. Trans. Mycol. Soc. Japan 3, 36-42. Soneda, M., and S. Uchida. 1971. A survey on the yeasts. Bull. Nat. Sci. Mus. Tokyo 14, 438-459. Sor, F , and H. Fukuhara. 1989. Analysis of chromosomal DNA patterns of the genus Kluyveromyces. Yeast 5, 1-10. Spaaij, F , G. Weber, J.F. van der Walt and F. Oberwinkler. 1990. Myxozyma udenii sp. nov, (Candidaceae), a new yeast isolated from the rhizosphere of Mangifera indica. Syst. Appl. Microbiol. 13, 182-185. Spaaij, F , G. Weber, H.J. Roeijmans, G.W. van Eijk and F Oberwinkler. 1991. Fellomyces horouitziae sp. nov, a new basidiomycetous yeast species isolated from a Xenasmatella basidiocarp. Antonie van Leeuwenhoek 59, 293-298. Spaaij, F , G. Weber and J.F. van der Walt. 1992a. Myxozyma sirexii sp. nov. (Candidaceae), a new yeast isolated from frass of the woodwasp Sirex juvencus L. Syst. Appl. Microbiol. 15, 4 2 7 ^ 3 1 . Spaaij, F , G. Weber, J.F. van der Walt and F. Oberwinkler. 1992b. Myxozyma neotropica sp. nov. (Candidaceae), a new yeast species from Costa Rica. Antonie van Leeuwenhoek 62, 261-265. Spaaij, F , G. Weber, T Aoki and J.F. van der Walt. 1993a. Myxozyma nipponensis sp. nov. (Candidaceae), a new species recovered from frass of Ips typographus f japonicus Niijima. J. Gen. Appl. Microbiol. 39, 521-528. Spaaij, F , G. Weber and M.Th. Smith. 1993b. Myxozyma uanderwaltii sp. nov. (Candidaceae), a new yeast species isolated from a flower of Protea repens (L.)L. Antonie van Leeuwenhoek 63, 17-21. Sparrow, A.H., H.J. Frice and A.G. Underbrink. 1972. A survey of DNA content per cell and per chromosome of prokaryotic and eukaryotic organisms: some evolutionary considerations. Brookhaven Symp. Biol. 23, 4 5 1 ^ 9 4 . Spencer, J.F.T., and F.A.J. Gorin. 1968. Mannose-containing polysaccharides of the apiculate yeasts Nadsonia, Hanseniaspora, Kloeckera and Saccharomycodes, and their use as an aid in classification. J. Bacteriol. 96, 180-183. Spencer, J.F.T., and F.A.J. Gorin. 1969a. Systematics of the genus Candida Berkhout: proton magnetic resonance spectra of the mannans and mannose-containing polysaccharides as an aid in classification. Antonie van Leeuwenhoek 35, 3 3 ^ 4 . Spencer, J.F.T., and F.A.J. Gorin. 1969b. Systematics of the genera Hansenula and Pichia: proton magnetic resonance spectra of their mannans as an aid in classification. Can. J. Microbiol. 15, 375-382. Spencer, J.F.T., and H.R. Sallans. 1956. Production of polyhydric alcohols by osmophilic yeasts. Can. J. Microbiol. 2, 72-79. Spencer, J.FT, H.J. Fhafif and N.R. Gardner. 1964. Metschnikowia kamienskii, sp. n., a yeast associated with brine shrimp. J. Bacteriol. 88, 758-762. Spencer, J.FT, FA.J. Gorin and A.F Tulloch. 1970. Torulopsis bombicola sp. n. Antonie van Leeuwenhoek 36, 129-133. Spencer, J.FT, D.M. Spencer, C. Bizeau, A. Vaughan-Martini and A. Martini. 1985. The use of mitochondrial mutants in hybridization of industrial yeast strains. V Relative parental contributions to the genomes of interspecific and intergeneric yeast hybrids obtained by protoplast fusion, as determined by DNA reassociation. Curr. Genet. 9, 623-625. Spencer-Martins, I. 1983. Bioconversion de amido per la levedura Lipomyces kononenkoae, Fh.D. Thesis. New University of Lisbon. Splendore, A. 1912. Bull. Soc. Fathol. Exot. 5, 313 (cited by Lodder and Kreger-van Rij 1952). Sprengel, K. 1827. Systema vegetabilum. Vol. 16. Gottingae. Sriprakash, K.S., and C. Batum. 1984. Possible chromosomal location for the killer determinant in Torulopsis glabrata. Curr. Genet. 8, 115119. Stadelmann, F 1975. A new species of the genus Bullera Derx. Antonie van Leeuwenhoek 41, 575-582. Stahl, U , and K. Esser. 1976. Genetics of fruit body production in higher Basidiomycetes. 1. Monokaryotic fruiting, its correlation with dikaryotic fruiting in Polyporus ciliatus. Mol. Gen. Genet. 148, 183197.

References Staib, F. 1962. Cryptococcus neoformans und Guizotia abyssinica (syn. G. oleifera D.C.) (Farbereaktion fur C. neoformans). Z. Hyg. 148, 466^75. Staib, F. 1963. Zur Kreatinin-Kreatin Assimilation in der Hefepilzdiagnostik. Zentralbl. Bakteriol. Parasitenkd., Abt. I, Orig. 191, 429-432. Staib, F., M. Seibold, E. Antweiler and B. Frolich. 1989. Staib agar supplemented with a triple antibiotic combination for the detection of Cryptococcus neoformans in clinical specimens. Mycoses 32, 4 4 8 452. Stark, M.J.R., and A. Boyd. 1986. The killer toxin of Kluyveromyces lactis: characterization of the toxin subunits and identification of the genes which encode them. EMBO J. 5, 1995-2002. Stark, M.J.R., A. Boyd, A.J. Mileham and M.A. Romanos. 1990. The plasmid-encoded killer system of Kluyveromyces lactis: a review. Yeast 6, 1-29. Starmer, W.T 1981a. A comparison of Drosophila habitats according to the physiological attributes of the associated yeast communities. Evolution 35, 35-52. Starmer, W.T. 1981b. The evolutionary ecology of yeasts found in the decaying stems of cacti. In: G.G. Stewart and I. Russell (Eds.), Current Developments in Yeast Research. Pergamon Press, Toronto, pp. 4 9 3 498. Starmer, W.T. 1982a. An analysis of the fundamental and realized niche of cactophilic yeasts. In: D.T Wicklow and G.C. Carroll (Eds.), The Fungal Community. Marcel Dekker, New York, pp. 129-155. Starmer, W.T. 1982b. Associations and interactions among yeasts, Drosophila, and their habitats. In: J.S.F. Barker and W.T. Starmer (Eds.), Ecological Genetics and Evolution. The cactus-yeastDrosophila model system. Academic Press, Sydney, pp. 159-174. Starmer, W.T, and J.C. Fogleman. 1986. Coadaptation of Drosophila and yeasts in their natural habitat. J. Chem. Ecol. 12, 1037-1055. Starmer, W.T, and H.J. Phaff. 1983. Analysis of the community structure of yeasts associated with the decaying stems of cactus. II. Opuntia species. Microb. Ecol. 9, 247-259. Starmer, W.T, H.J. Phaff, M. Miranda and M.W Miller. 1978a. Pichia cactophila, a new species of yeast found in decaying tissue of cacti. Int. J. Syst. Bacteriol. 28, 318-325. Starmer, W.T, H.J. Phaff, M. Miranda and M.W. Miller. 1978b. Pichia amethionina, a new heterothallic yeast associated with the decaying stems of cereoid cacti. Int. J. Syst. Bacteriol. 28, 4 3 3 ^ 4 1 . Starmer, W.T, H.J. Phaff, M. Miranda, M.W. Miller and J.S.F Barker. 1979. Pichia opuntiae, a new heterothallic species of yeast in the decaying cladodes of Opuntia inermis and in the necrotic tissue of cereoid cacti. Int. J. Syst. Bacteriol. 29, 159-167. Starmer, W.T, H.W Kircher and H.J. Phaff. 1980. Evolution and speciation of host plant specific yeasts. Evolution 34, 137-146. Starmer, W.T, H.J. Phaflf, J. Tredick, M. Miranda and V Aberdeen. 1984. Pichia antillensis, a new species of yeast associated with necrotic stems of cactus in the Lesser Antilles. Int. J. Syst. Bacteriol. 34, 350354. Starmer, W.T, J.S.F Barker, H.J. Phaff and J.C. Fogleman. 1986. The adaptations of Drosophila and yeasts: their interactions with the volatile, 2-propanol, in the cactus-microorganism-Dra^op/zZ/a model system. Aust. J. Biol. Sci. 39, 69-77. Starmer, W.T, P.F. Ganter, V Aberdeen, M.A. Lachance and H.J. Phaflf. 1987. The ecological role of killer yeasts in natural communities of yeasts. Can. J. Microbiol. 33, 783-796. Starmer, W.T, Y Aberdeen and M.A. Lachance. 1988a. The yeast community associated with Opuntia stricta (Haworth) in Florida, with regard to the moth Cactoblastis cactorum (Berg.). Fla. Scientist 51, 7-11. Starmer, W.T, F. Peris and A. Fontdevila. 1988b. The transmission of yeasts by Drosophila buzzati during courtship and mating. Anim. Behav 36, 1691-1695. Starmer, W.T, M.A. Lachance, H.J. Phaff and WB. Heed. 1990. The biogeography of yeasts associated with decaying cactus tissue in North America, the Caribbean, and Northern Venezuela. Evol. Biol. 24, 2 5 3 296.

1003

Starmer, W.T, J.C. Fogleman and M.A. Lachance. 1991. The yeast community of cacti. In: J.H. Andrews and S.S. Hriano (Eds.), Microbial Ecology of Leaves. Springer, New York, pp. 158-178. Starmer, W.T, P F Ganter and V Aberdeen. 1992. Geographic distribution and genetics of killer phenotypes for the yeast Pichia kluyueri across the United States. Appl. Environ. Microbiol. 58, 990997. Stautz, W 1931. Beitrage zur Schleimflussfrage. Phytopathol. Z. 3, 163229. Steele, S.D., and T W Eraser. 1973. The ultrastructure of Geotrichum candidum hyphae. Can. J. Microbiol. 19, 1507-1512. Steensma, H.Y., FC.M. de Jongh and M. Linnekamp. 1988. The use of electrophoretic karyotypes in the classification of yeasts: Kluyveromyces marxianus and A^. lactis. Curr. Genet. 14, 311-317. Steer, M.W. 1990. Role of actin in tip growth. In: LB. Heath (Ed.), Tip Growth in Plant and Fungal Cells. Academic Press, London, pp. 119145. Steiner, J.M. 1924. Etude sur les levures actives des vins valaisins. Thesis. Geneve. Stelling-Dekker, N.M. 1931. Die sporogenen Hefen. Verb. K. Ned. Akad. Wetensch., Afd. Natuurk., Sect. II, 28, 1-547. Stenderup, A., and A.L. Bak. 1968. Deoxyribonucleic acid base composition of some species within the genus Candida. J. Gen. Microbiol. 52,231-236. Stenderup, A., and I B . Thomsen. 1964. Identification of Candida albicans. Acta Pathol. Microbiol. Scand. 62, 303-304. Stenderup, A., S.A. Meyer, A.L. Bak and C. Christiansen. 1972. Taxonomy of Candida and Torulopsis. In: G. Terui (Ed.), Fermentation Technology Today, Proc. IV Int. Ferment. Symp., Soc. Ferment. Technol., Osaka, Japan, pp. 793-795. Stewart, G.G., R. Jones and I. Russell. 1985. The use of derepressed yeast mutants in the fermentation of brewery wort. Proc. Eur. Brew. Congr. 243-250. Stoddard, J.L., and E.C. Cutler. 1916. Torula infection in man. Stud. Rock. Inst. Med. Res. 25, 1-98. Stodola, F.H., and L.J. Wickerham. 1960. Formation of extracellular sphingolipids by microorganisms. II. Structural studies on tetraacetylphytosphingosine fi-om the yeast Hansenula ciferrii. J. Biol. Chem. 235, 2584-2585. Stolk, A.C., and J.C. Dakin. 1966. Moniliella, a new genus of Moniliales. Antonie van Leeuwenhoek 32, 3 9 9 ^ 0 9 . Stolp, H. 1988. Microbial Ecology, Organisms, Habitats, Activities. Cambridge University Press, Cambridge, 308pp. Storck, R. 1966. Nucleotide composition of nucleic acids of fiingi. II. Deoxyribonucleic acids. J. Bacteriol. 91, 227-230. Storck, R., and C.J. Alexopoulos. 1970. Deoxyribonucleic acid of fiingi. Bacteriol. Rev 34, 126-154. Storck, R., C.J. Alexopoulos and H.J. Phaff. 1969. Nucleotide composition of deoxyribonucleic acid of some species of Cryptococcus, Rhodotorula and Sporobolomyces. J. Bacteriol. 98, 1069-1072. Stout, D.L., and C.R. Shaw. 1973. Comparative enzyme patterns in Thamnidium elegans and T. anomalum. Mycologia 65, 803-808. Stout, D.L., and C.R. Shaw. 1974. Genetic distance among certain species of MucoK Mycologia 66, 969-977. Strachan, A.A., R.J. Yu and F. Blank. 1971. Pigment production of Cryptococcus neoformans grown with extracts of Guizotia abyssinica. Appl. Microbiol. 22, 478-479. Streiblova, E. 1963. On the question of the taxonomy of Endomycopsis javanensis (Klocker) Dekker. Folia Microbiol. (Prague) 8, 170-175. Streiblova, E. 1971. Cell division in yeasts. In: A. Perez-Miravette and D. Pelaez (Eds.), Recent Advances in Microbiology, Proc. 10th Int. Congress on Microbiology, Mexico City, pp. 131-140. Streiblova, E. 1981. Fission. In: W.N. Arnold (Ed.), Yeast Cell Envelopes: Biochemistry, Biophysics, and Ultrastructure. Vol. 2. CRC Press, Boca Raton, FL, pp. 79-92. Stumm, C , LM.H. Hermans, E.J. Middelbeek, A.F. Croes and G.J.M.L. de Vries. 1977. Killer-sensitive relationships in yeasts from natural habitats. Antonie van Leeuwenhoek 43, 125-128.

1004

References

Sturley, S.L., Q. Elliot, J. LeVitre, D.J. Tipper and K.A. Bostian. 1986. Mapping of functional domains within the Saccharomyces cerevisiae type I killer preprotoxin. EMBO J. 5, 3381-3389. Sturm, J. 1829. Deutschlands Flora in Abbildungen nach der Natur, Abt. 3, Vol. 8. Niirnberg. Su, C.-S. 1990. Genetic and biochemical characterization of some physiologically similar Candida species. Dissertation. Georgia State University, Atlanta, GA. Su, C.-S., and S.A. Meyer. 1991. Characterization of mitochondrial DNA in various Candida species: isolation, restriction endonuclease analysis, size, and base composition. Int. J. Syst. Bacteriol. 41, 6-14. Subirana, J.A., and P. Doty. 1966. Kinetics of renaturation of renatured DNA. I. Spectrophotometric results. Biopolymers 4, 171-187. Sugisaki, Y., N. Gunge, K. Sakaguchi, M. Yamasaki and G. Tamura. 1983. Characterization of a novel killer toxin encoded by a doublestranded linear DNA plasmid of Kluyveromyces lactis. Eur. J. Biochem. 141, 241-245. Sugita, T., A. Nishikawa and T. Shinoda. 1992. DNA relatedness among three varieties of Cryptococcus albidus. J. Gen. Appl. Microbiol. 38, 83-86. Sugita, T., A. Nishikawa and T. Shinoda. 1994. Reclassification of Trichosporon cutaneum by DNA relatedness by the spectrophotometric method and the chemiluminometric method. J. Gen. Appl. Microbiol. 40, 3 9 7 ^ 0 8 . Sugita, T., A. Nishikawa, T. Shinoda, K. Yoshida and M. Ando. 1995. A new species, Trichosporon domesticum, isolated from the house of a summer-type hypersensitivity pneumonitis patient in Japan. J. Gen. Appl. Microbiol. 41, 429-436. Sugiyama, J., and S. Goto. 1967. Coprophilous fiingi fi-om Karakorum I. J. Japan. Bot. 42, 75-84. Sugiyama, J., and S. Goto. 1969. Mycoflora in core samples from stratigraphic drillings in middle Japan IV The yeast genera Candida Berkhout, Trichosporon Behrend, and Rhodotorula Harrison em. Lodder from core samples. J. Fac. Sci. Tokyo Univ., Sect. Ill, Bot. 10,97-116. Sugiyama, J., and S.-O. Suh. 1993. Phylogenetic analysis of basidiomycetous yeasts by means of 18S ribosomal RNA sequences: relationship of Erythrobasidium hasegawianum and other basidiomycetous yeast taxa. Antonie van Leeuwenhoek 63, 201-209. Sugiyama, J., and K. Yamatoya. 1990. Electrophoretic comparison of enzymes as a chemotaxonomic aid among Aspergillus taxa: (1) Aspergillus sects. Ornati and Cremei. In: R.A. Samson and J.I. Pitt (Eds.), Modem Concepts in Penicillium and Aspergillus Classification, Plenum Press, New York, pp. 385-393. Sugiyama, J., M. Fukagawa, S.-W. Chiu and K. Komagata. 1985. Cellular carbohydrate composition, DNA base composition, ubiquinone systems and Diazonium blue B color test in the genera Rhodosporidium, Leucosporidium, Rhodotorula and related basidiomycetous yeasts. J. Gen. Appl. Microbiol. 31, 519-550. Sugiyama, J., M. Itoh, Y. Katayama, Y Yamaoka, K. Ando, M. Kakishima and H. Kuraishi. 1988. Ubiquinone systems in fiingi. III. Distribution of ubiquinones in smut and rust fiingi. Mycologia 80, 115-120. Sugiyama, J., K. Tokuoka, S.-O. Suh, A. Hirata and K. Komagata. 1991. Sympodiomycopsis: a new yeast-like anamorph genus with basidiomycetous nature from orchid nectar. Antonie van Leeuwenhoek 59, 95-108. Sugiyama, J., H. Nishida and S.-O. Suh. 1993. The paradigm of fimgal diagnoses and descriptions in the era of molecular systematics: Saitoella complicata as an example. In: D.R. Reynolds and J.W. Taylor (Eds.), The Fungal Holomorph: Mitotic, Meiotic and Pleomorphic Speciation in Fungal Systematics. CAB International, Wallingford, UK, pp. 261-269. Suh, S., and T. Nakase. 1995. Phylogenetic analysis of the ballistosporous anamorphic genera Udeniomyces and Bullera, and related basidiomycetous yeasts, based on 18S rDNA sequences. Microbiology 141, 901-906. Suh, S.-O., and J. Sugiyama. 1993a. Septal pore ultrastructure

of Leucosporidium lari-marini, a basidiomycetous yeast, and its taxonomic implications. J. Gen. Appl. Microbiol. 39, 257-260. Suh, S.-O., and J. Sugiyama. 1993b. Phylogeny among the basidiomycetous yeasts inferred from small subunit ribosomal DNA sequence. J. Gen. Microbiol. 139, 1595-1598. Suh, S.-O., and J. Sugiyama. 1994. Phylogenetic placement of the basidiomycetous yeasts £Kondoa' maluinella and Rhodosporidium dacryoidum, and the anamorphic yeast Sympodiomycopsis paphiopedili by means of 18S gene sequence analysis. Mycoscience 35, 367-375. Suh, S.-O., A. Hirata, J. Sugiyama and K. Komagata. 1993a. Septal ultrastructure of basidiomycetous yeasts and their taxonomic implications with observations on the ultrastructure for Erythrobasidium hasegawianum and Sympodiomycopsis paphiopedili. Mycologia 85, 30-37. Suh, S.-O., T. Kuroiwa and J. Sugiyama. 1993b. Quantitative differences of nuclear DNA content and their taxonomic implications in Leucosporidium scottii, Rhodosporidium toruloides, and related basidiomycetous yeasts. J. Gen. Appl. Microbiol. 39, 295-302. Sullivan, D.J., T.J. Westerneng, K.A. Haynes, D.E. Bennett and D.C. Coleman. 1995. Candida dubliniensis sp. nov.: phenotypic and molecular characterization of a novel species associated with oral candidosis in HIV-infected individuals. Microbiol. 141, 1507-1521. Suminoe, K., and H. Miwa. 1930. Saccharomyces eryobotryae sp. n. Suminoe et Miwa. J. Agric. Chem. Soc. Japan 6, 721-728. In Japanese. Summerbell, R.C. 1983. The heterobasidiomycetous yeast genus Leucosporidium in an area of temperate climate. Can. J. Bot. 61, 1401-1410. Summerbell, R.C. 1985. The staining of filamentous fiingi with diazonium blue B. Mycologia 77, 587-593. Sumstine, D.R. 1913. Studies in North American Hyphomycetes II. The tribe Oosporeae. Mycologia 5, 45-61. Surawicz, C M . , G.W. Elmer, P. Speelman, L.V McFarland, J. Chinn and G. van Beele. 1989. Prevention of antibiotic-associated diarrhea by Saccharomyces boulardii: a prospective study. Gastroenterology 96, 981-988. Surmont, I., B. Vergauwen, L. Marcelis, L. Verbist, G. Verhoef and M. Boogaerts. 1990. First report of chronic meningitis caused by Trichosporon beigelii. Eur. J. Clin. Microbiol. Infect. Dis. 9, 226-229. Suzuki, C , and S. Nikkuni. 1989. Purification and properties of the killer toxin produced by a halotolerant yeast, Pichia farinosa. Agric. Biol. Chem. 53, 2599-2604. Suzuki, C , K. Yamada, N. Okada and S. Nikkuni. 1989. Isolation and characterization of halotolerant killer yeasts from fermented foods. Agric. Biol. Chem. 53, 2593-2597. Suzuki, M., and T. Nakase. 1986. Heterogeneity of ubiquinone systems in the genus Sporothrix. J. Gen. Appl. Microbiol. 32, 165-168. Suzuki, M., and T. Nakase. 1988a. The distribution of xylose in the cells of ballistosporogenous yeasts - Application of high performance liquid chromatography without derivatization to the analysis of xylose in whole cell hydrolysates. J. Gen. Appl. Microbiol. 34, 95-103. Suzuki, M., and T. Nakase. 1988b. Validity of Candida natalensis van der Walt et Tscheuschner. Yeast 5, S361-S365. Suzuki, M., and T. Nakase. 1993. A taxonomic study of Candida glaebosa and phenotypically related species Candida saitoana, with a description of a new species Candida pseudoglaebosa. Bull. Japan. Fed. Cult. Coll. 9, 120-134. Suzuki, M., T. Nakase and Y Fukazawa. 1991. Candida fragi, a new species of anamorphic yeast isolated fi^om fermenting strawberry. J. Gen. Appl. Microbiol. 37, 4 2 3 ^ 2 9 . Suzuki, M., T. Nakase, H. Mori, H. Toriumi and C.P. Kurtzman. 1992. Chemotaxonomic study on halophilic/halotolerant yeasts in the matured soy sauce mashes. Bull. Japan. Fed. Cult. Coll. 8, 18-27. Suzuki, M., T. Nakase and K. Komagata. 1994. Candida stellimalicola, a new species of anamorphic yeast isolated from star apple in Thailand. J. Gen. Appl. Microbiol. 40, 115-121. Suzuki, T, Y Sumino, S. Akiyama and H. Fukada. 1973. Method of producing citric acid. U.S. Patent 3 733253.

References Swann, E.G., and J.W. Taylor. 1993. Higher taxa of basidiomycetes: an 18S rRNA gene perspective. Mycologia 85, 923-936. Swann, E.G., and J.W. Taylor. 1995a. Toward a phylogenetic systematics of the Basidiomycota: integrating yeasts and filamentous Basidiomycetes using IBS rRNA gene sequences. Stud. Mycol. 38, 147-161. Swann, E.G., and J.W. Taylor. 1995b. Phylogenetic perspectives on basidiomycete systematics: evidence from the IBS rRNA gene. Gan. J. Bot. 73(Suppl. 1), SB62-S86B. Sydow, H. 1912. Guilliermondia, un nouveau genre de la famille des Saccharomycetes a copulation heterogamique. Ann. Mycol. 10, 347348. Sydow, H., and P. Sydow. 1918. Mykologische Mitteilungen. Ann. Mycol. 16, 240-248. Sydow, H., and P. Sydow. 1919. Mykologische Mitteilungen. Ann. Mycol. 17, 3 3 ^ 7 . Syrop, M.J., and A. Beckett. 1972. The origin of ascospore-delimiting membranes in Taphrina deformans. Arch. Mikrobiol. 86, 185-191. Szep, E., and E.K. Novak. 1963. A new yeast species: Candida requinyii n. sp. Acta Bot. Acad. Sci. Hung. 9, 447-453. Takahashi, T. 1911. Rep. Governm. Inst. Brewing Japan 43, 417. Takahashi, T., and M. Yukawa. 1915. On the budding fiingi of "ShoyuMoromi" and "Shoyu-Koji". J. Goll. Agric. Imp. Univ. Tokyo 5, 2 2 7 261. In Japanese. Takano, I., and Y. Oshima. 1967. An allele specific and a complementary determinant controlling homothallism in Saccharomyces ouiformis. Genetics 57, 875-885. Takano, I., and Y. Oshima. 1970. Mutational nature of an allelespecific conversion of the mating type by the homothallic gene HOa Saccharomyces. Genetics 65, 4 2 1 ^ 2 7 . Takeda, I., K. Iguchi, K. Tsuzuki and T. Nakano. 1972. Method for the cultivation of yeasts in a nutritive medium containing a nonionic surface active agent. US Patent 3658647. Takematsu, A., T. Nakase and Y. Yamada. 1990. Phylogenetic relationship among species of Sporobolomyces deduced from partial sequences of 18S ribosomal RNA. In: Yeast Taxonomy: Theoretical and Practical Aspects. Smolenice, Gzechoslovakia, p. 64. Takeo, K., K. Nishimura and M. Miyaji. 1987. Resistance of the neck plasma membrane between the mother and the bud of Saccharomyces cereuisiae and Candida albicans to amphoterin Binduced deformation. FEMS Microbiol. Lett. 48, 321-324. Talbot, P.H.B. 1968. Fossilized pre-Patouillardian taxonomy. Taxon 17, 620-628. Talice, R.V, and J.E. Mackinnon. 1934. Determinacion de algunas cepas argentinas de hongos levuriformes. Bol. Inst. Glin. Quinirgica 8, 160167. Tamaoka, J., Y Katayama-Fujimura and H. Kuraishi. 1983. Analysis of bacterial menaquinone mixtures by high performance liquid chromatography. J. Appl. Bacteriol. 54, 31-36. Tanaka, H., H.J. Phaff and L.W Higgins. 1966. Enzymatic hydrolysis of yeast cell walls. II. Susceptibilities of isolated cell walls and ascus walls of various yeasts to the actions of bacterial endo-(3-glucanases. Symposium on Yeast Protoplasts, Abh. Dtsch. Akad. Wiss. Berlin, Kl. Med. 6, 113-129, 353-357. Tanaka, K., and T. Kanbe. 1986. Mitosis in the fission yeast Schizosaccharomyces pombe as revealed by freeze-substitution electron microscopy. J. Gell Sci. 180, 253-268. Tangeras, A., and E. Slinde. 1994. Goloring of salmonids in aquaculture: the yeast Phaffia rhodozyma as a source of astaxanthin. In: A.M. Martin (Ed.), Fisheries Processing, Biotechnological Applications. Ghapman and Hall, London, pp. 391-431. Tani, Y , W.-J. Lim and H.-G. Yang. 1988. Isolation of L-methionineenriched mutant of a methylotrophic yeast, Candida boidinii No. 2201. J. Ferm. Technol. 66, 153-158. Taniguchi, Y 1926. Experimentelle Studie iiber "erosio interdigitalis blastomycetica", besonders iiber diejenigen bei den Papierarbeitern in der Provinz Gifii ("Sadare"-Krankheit). Japan. J. Med. Sci., Trans. XIII. Dermatol. Urol. 1, 75-94.

1005

Tannenbaum, S.R., and D.I.G. Wang (Eds.). 1975. Single Gell Protein II. The MIT Press, Gambridge, MA, chapters 21-23. Tatsumi, G., and H. Katagiri. 1950. Studies on the utilization of pentose by microbiological method. On pentose-assimilable yeasts. Bull. Inst. Ghem. Res. Kyoto Univ 22, 53-61. Taylor, J.W, and K. Wells. 1979. A light and electron microscopic study of mitosis in Bullera alba and the histochemistry of some cytoplasmic substances. Protoplasma 98, 31-62. Taylor, N.W 1965. Purification of sexual agglutination factor from the yeast Hansenula wingei by chromatography and gradient sedimentation. Arch. Biochem. Biophys. I l l , 181-186. Taylor, N.W, and WL. Orton. 1968. Sexual agglutination in yeast. VII. Significance of the 1.7S component from reduced 5 agglutinin. Arch. Biochem. Biophys. 126, 912-921. Templeton, A.R. 1983. Systematics of basidiomycetes based on 5S rRNA sequences and other data. Nature (London) 303, 731. Tengku Zainal Mulok, T.E. 1988. Nuclear DNA base composition and base sequence complementarity of recently described Candida species and strains of selected species, Thesis. Georgia State University, Atlanta, GA. Teunisson, D.J., H.H. Hall and L.J. Wickerham. 1960. Hansenula angusta, an excellent species for demonstration of the coexistence of haploid and diploid cells in a homothallic yeast. Mycologia 52, 184-188. Thaysen, A.G., and M. Morris. 1943. Preparation of a giant strain of Torulopsis utilis. Nature 152, 526-528. Therrien, G.D., M.H. Royer and J.A. Strauss. 1988. The ultrastructure and nuclear DNA content of Tilletia indica. Phytopathology 78, 7 2 8 732. Thornton, R.J. 1986. Genetic characterization of New Zealand and Australian wine yeasts. Antonie van Leeuwenhoek 52, 97-103. Timberlake, WE. 1978. Low repetitive DNA content in Aspergillus nidulans. Science 202, 973-975. Tipper, D.J., and K.A. Bostian. 1984. Double-stranded ribonucleic acid killer systems in yeasts. Microbiol. Rev. 48, 125-156. Todd, R.L., and W W Herrmann. 1936. The life cycle of the organism causing yeast meningitis. J. Bacteriol. 32, 89-97. Toffaletti, D.L., TH. Rude, S.A. Johnston, D.T. Durack and J.R. Perfect. 1993. Gene transfer in Cryptococcus neoformans by use of ballisfic delivery of DNA. J. Bacteriol. 175, 1405-1411. Toh-e, A., S. Tada and Y Oshima. 1982. 2 ^im DNA-like plasmids in the osmophilic haploid yeast Saccharomyces rouxii. J. Bacteriol. 151, 1380-1390. Toh-e, A., H. Araki, I. Utatsu and Y Oshima. 1984. Plasmids resembling 2 |im DNA in the osmotolerant yeasts Saccharomyces bailii and Saccharomyces bisporus. J. Gen. Microbiol. 130, 2527-2534. Toivola, A., D. Yarrow, E. van den Bosch, J.P. van Dijken and WA. Scheffers. 1984. Alcoholic fermentation of D-xylose by yeasts. Appl. Environ. Microbiol. 47, 1221-1223. Tokuoka, K., T. Ishitani, S. Goto and K. Komagata. 1987. Four new yeast species belonging to the genus Candida. J. Gen. Appl. Microbiol. 33, 1-10. Tolstorukov, I.I., M.S. Zimina and D.I. Kazantseva. 1989. The killer factor k2 of the yeast Saccharomyces cereuisiae has a broad species spectrum of action. Biotechnologiya 5, 295-302. In Russian. Torkelsen, A.-E. 1968. The genus Tremella in Norway. Nytt Mag. Bot. 15L, 225-239. Toyomasu, T, and A. Zennyozi. 1981. On the application of isozyme electrophoresis to identification of strains in Lentinus edodes. Mushroom Science XI, Proc. 11th Int. Scientific Gong, on Gultivation of Edible Fungi, Australia, pp. 675-684. Traquair, J.A., L.A. Shaw and WR. Jarvis. 1988a. Stephanoascus farinosus, teleomorph of Sporothrix fungorum. Mycologia 80, 244246. Traquair, J.A., L.A. Shaw and WR. Jarvis. 1988b. New species of Stephanoascus with Sporothrix anamorphs. Gan. J. Bot. 66, 926-933. Trinci, A.P.J., and K. Gull. 1973. Protomyces inundatus, a yeast which is sensitive to griseofiilvin. Arch. Mikrobiol. 94, 359-364.

1006

References

Trotsenko, Yu.A., S.V Bykovskaya, N.N. Kirikova and LP. Bab'eva. 1974. Candida methylica sp. n. - a new methanol-utilizing yeast species. Mikol. Fitopatol. 8, 323-326. In Russian. Trowbridge, J.P., and M. Walker. 1986. The Yeast Syndrome. Bantam Books, New York, 419pp. Triiper, E. 1928. Uber milchzuckervergarende Hefen der Rohmilch. Milchwirtsch. Forsch. 6, 3 5 1 ^ 0 2 . Truss, C O . 1978. Tissue injury by Candida albicans: mental and neurologic manifestations. J. Orthomol. Psychiatr. 7, 17-37. Tsai, H.-K, J.-S. Liu, C. Staben, M.L Christensen, G.C.M. Latch, M.R. Siegel and C.L. Schardl. 1994. Evolutionary diversification of fungal endophytes of tall fescue grass by hybridization with Epichloe species. Proc. Natl. Acad. Sci. USA 91, 2542-2546. Tschalenko, D.K. 1941. Die Ursachen fiir die Verringerung des Sauregehaltes bei der Garung von Fruchtweinen. Arb. Zentr. Wiss. Onolog. Labor, Moscow-Leningrad, 1 (cited by Kudryavtsev 1960). Tsuchiya, E., K. Abe and S. Fukui. 1978. Sequence of events in early stages of sexual differentiation caused by rhodotorucine A, a fungal sex hormone: biological determination using matingless mutants derived from Rhodosporidium toruloides M 1057. J. Gen. Appl. Microbiol. 24, 291-294. Tsuchiya, T , and M. Imai. 1968. Serological relationships among various yeast species of Hansenula, Kloeckera and Hanseniaspora. In: Taxonomy of Microorganisms, Proc. 10th I.A.M. Symposium on Microbiology, October 1968, pp. 147-158. Tsuchiya, T, Y Fukazawa and S. Kawzkita. 1965. Significance of serological studies in yeast. Mycopathol. Mycol. Appl. 26, 1-15. Tsuchiya, T, S. Kawakita, M. Imai and K. Miyagawa. 1966. Serological classification of the genera Kloeckera and Hanseniaspora. Japan. J. Exp. Med. 36, 555-562. Tsuchiya, T., Y Fukazawa, T. Shinoda and M. Imai. 1967. Perfect form of Candida krusei. Japan. J. Exp. Med. 37, 285-290. Tsuchiya, T, Y Fukazawa and K. Suzuki. 1969. Serological classification of the genus Sporobolomyces. Japan. J. Exp. Med. 39, 101-107. Tsugawa, R., T. Nakase, T. Kobayashi, K. Yamashita and S. Okumura. 1969. Fermentation of ^-paraffins by yeast. Part III. a-Ketoglutarate productivity of various yeast. Agric. Biol. Chem. (Tokyo) 33, 929938. Tsuneda, A. 1987. Developmental plasticity in conidiogenesis of Dipodascus aggregatus. Trans. Mycol. Soc. Japan 28, 303-312. Tsuneda, A. 1989. Sporogenesis and septum schizolysis in Dipodascus aggregatus. Can. J. Bot. 67, 2150-2153. Tubaki, K. 1952. Studies on the Sporobolomycetaceae in Japan I: on Tilletiopsis. Nagaoa 1, 26-31. Tubaki, K. 1953. Studies on the Sporobolomycetaceae in Japan III: on Sporobolomyces and Bullera. Nagaoa 3, 12-21. Tubaki, K. 1957. Biological and cultural studies of three species of Protomyces. Mycologia 49, 44-54. Tubaki, K. 1958. Studies on the Japanese Hyphomycetes (IV) Miscellaneous group. Bot. Mag. Tokyo 71, 131-137. Tubaki, K., and M. Soneda. 1959. Cultural and taxonomic studies on Prototheca. Nagaoa (Mycol. J. Nagao Inst. Tokyo) 6, 25-34. Tulasne, L.R., and C. Tulasne. 1847. Memoire sur les Ustilaginees comparees aux Uredinees. Ann. Sci. Natur., Ser. 3, 7, 12-127. Tulasne, L.R., and C. Tulasne. 1865. Selecta Fungorum Carpologia Vol. 3. Paris, pp. 61-62. Turner, W.E., and D.G. Aheam. 1970. Ecology and physiology of yeasts of an asphalt refinery and its watershed. In: D.G. Aheam (Ed.), Recent Trends in Yeast Research. Spectrum, Vol 1. Georgia State University, Atlanta, pp. 113-123. Tuse, D. 1984. Single-cell protein: current status and future prospects. CRC Crit. Rev Food. Sci. Nutr. 19, 273-325. Tuynenburg-Muys, G., and R. Willemse. 1965. The detection and enumeration of lipolytic microorganisms by means of a modified Eykman-plate method. Antonie van Leeuwenhoek 31, 103-112. Ullman, J.S., and B.J. McCarthy. 1973. The relationships between mismatched base pairs and the thermal stability of DNA duplexes.

I. Effects of depurination and chain scission. Biochim. Biophys. Acta 294, 4 0 5 ^ 1 5 . Ulloa, M., and T. Herrera. 1973. Descripcion de una variedad de Kloeckera corticis aislada del pulque. Bol. Soc. Mex. 7, 27-32. Ulloa, M., and T. Herrera. 1978. Torulopsis taboadae, una nueva especie de levadura aislada del colonche de Zacatecas, Mexico. Bol. Soc. Mexicana Micol. 12, 5-12. Unger, F. 1833. Die Exantheme der Pflanzen. Wien, 422pp. Urakami, T. 1975. Process for cultivating ethanol-assimilating yeasts. US Patent 3929578, Dec. 30, 1975. Urakami, T, and R. Michimi. 1977. Process for producing yeast cells. U.S. Patent 4033 821. Vacek, D.C., PD. East, J.S.E Barker and M.H. Soliman. 1985. Feeding and oviposition preference of Drosophila buzzati for microbial species isolated from its natural environment. Biol. J. Linn. Soc. 24, 175-187. Valadon, L.R.G. 1964. Carotenoid pigments of some lower ascomycetes. J. Exp. Biol. 15, 219-224. Valadon, L.R.G. 1966. Carotenoids of fungi. Adv. Frontiers PI. Sci. 15, 183-206. Valadon, L.R.G., J.G. Manners and A. Myers. 1962. Studies on the lifehistory and taxonomic position of Protomyces inundatus Dangeard. Trans. Br. Mycol. Soc. 45, 573-586. Valverde, R.A., and G.E. Templeton. 1984. Leaf gall of Torilis japonica caused by Protomyces macrosporus in Arkansas. Plant Dis. 68, 716717. van Belkum, A., T. Boekhout and R. Bosboom. 1994. Monitoring spread of Malassezia infections in a neonatal intensive care unit by PCRmediated genetic typing. J. Clin. Microbiol. 32, 2528-2532. van Beyma, F.H. 1933. On some moulds of the genus Monilia isolated from tobacco. Zentralbl. Bakteriol. Parasitenkd. Abt. 2, 88, 124-131. Van Cutsem, E., M.S. Boogaerts, G. Tricot and R.L. Verwilghen. 1986. Multiple brain abscesses caused by Torulopsis glabrata in an immunocompromised patient. Mykosen. 29, 306-308. Van de Peer, Y, L. Hendriks, A. Goris, J.-M. Neefs, M. Vancanneyt, K. Kersters, J.-F Berny, G.L. Hennebert and R. De Wachter. 1992. Evolution of basidiomycetous yeasts as deduced from small ribosomal subunit RNA sequences. Syst. Appl. Microbiol. 15, 250-258. van der Burg, A.C. 1974. The occurrence of Sporobolomyces roseus, a red yeast, on leaves of Phragmites australis. Thesis, Free University Amsterdam, van der Walt, J.P. 1956a. Kluyueromyces - a new yeast genus of the Endomycetales. Antonie van Leeuwenhoek 22, 265-272. van der Walt, J.P. 1956b. The yeast Kluyueromyces africanus nov. spec. and its phylogenetic significance. Antonie van Leeuwenhoek 22, 3 2 1 326. van der Walt, J.P. 1956c. Saccharomyces transuaalensis nov. spec, a new yeast from soil. Antonie van Leeuwenhoek 22, 190-192. van der Walt, J.P. 1957. Three new sporogenous yeasts from soil. Antonie van Leeuwenhoek 23, 23-29. van der Walt, J.P. 1959a. Pichia robertsii nov. spec, a new haploid homothallic yeast. Antonie van Leeuwenhoek 25, 337-343. van der Walt, J.P. 1959b. Endomycopsis wickerhamii nov. spec, a new heterothallic yeast. Antonie van Leeuwenhoek 25, 344-348. van der Walt, J.P. 1959c. Endomyces reessii nov. sp. Antonie van Leeuwenhoek 25, 4 5 8 ^ 6 4 . van der Walt, J.P. 1961. Brettanomyces custersianus nov. spec. Antonie van Leeuwenhoek 27, 332-336. van der Walt, J.P. 1962. Schwanniomyces persoonii nov. spec. Antonie van Leeuwenhoek 28, 81-84. van der Walt, J.P. 1963. Fabospora phaffii sp. n. Antonie van Leeuwenhoek 29, 319-322. van der Walt, J.P. 1964. Dekkera, a new yeast genus of the Saccharomycetaceae. Antonie van Leeuwenhoek 30, 273-280. van der Walt, J.P. 1965a. Saccharomyces uafer and S. inconspicuus spp. n. Antonie van Leeuwenhoek 31, 187-192. van der Walt, J.P. 1965b. Saccharomyces inusitatus sp. n. Antonie van Leeuwenhoek 31, 277-281.

References van der Walt, J.P. 1965c. The emendation of the genus Kluyueromyces van der Walt. Antonie van Leeuwenhoek 31, 341-348. van der Walt, J.P. 1966a. Lodderomyces, a new genus of the Saccharomycetaceae. Antonie van Leeuwenhoek 32, 1-5, van der Walt, J.P. 1966b. Pichia acaciae sp. n. Antonie van Leeuwenhoek 32, 159-161. van der Walt, J.P. 1967. Wingea, a new yeast genus of the Saccharomycetaceae. Antonie van Leeuwenhoek 33, 97-99. van der Walt, J.P. 1970a. Criteria and methods used in classification. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. NorthHolland, Amsterdam, pp. 34-113. van der Walt, J.P 1970b. Dekkera van der Walt. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 157-165. van der Walt, J.P. 1970c. Kluyueromyces (van der Walt) emend, van der Walt. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 316-378. van der Walt, J.P. 1970d. Saccharomyces (Meyen) emend. Reess. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. NorthHolland, Amsterdam, pp. 555-718. van der Walt, J.P. 1970e. Brettanomyces Kuflferath et van Laer. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. NorthHolland, Amsterdam, pp. 863-892. van der Walt, J.P. 1970f The perfect and imperfect states of Sporobolomyces salmonicolor Antonie van Leeuwenhoek 36, 49-55. van der Walt, J.P. 1970g. The genus Syringospora Quinquaud emend. Mycopathol. Mycol. Appl. 40, 231-243. van der Walt, J.P. 1971. New combinations in the genera Brettanomyces, Kluyueromyces, Lodderomyces and Wingea. Bothalia 10, 4 1 7 ^ 1 8 . van der Walt, J.P. 1972. The yeast genus Ambrosiozyma gen. nov. (Ascomycetes). Mycopathol. Mycol. Appl. 46, 305-316. van der Walt, J.P. 1973. Aessosporon dendrophilum sp. nov., the perfect state of Bullera dendrophila. Antonie van Leeuwenhoek 39, 4 5 5 ^ 6 0 . van der Walt, J.P. 1978. The genus Pachytichospora gen. nov. (Saccharomycetaceae). Bothalia 12, 563-564. van der Walt, J.P. 1982a. Pichia meyerae, a new, sexually agglutinating, heterothallic, diploid yeast species. Antonie van Leeuwenhoek 48, 383-388. van der Walt, J.P 1982b. Hansenula euphorbiaphila sp. nov., a new, diploid heterothallic yeast species. Antonie van Leeuwenhoek 48, 465^70. van der Walt, J.P. 1984a. Dekkera van der Wah. In: N.J.W Kreger-van Rij (Ed.). The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 146-150. van der Walt, J.P. 1984b. Lodderomyces van der Walt. In: N.J.W. Kregervan Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 263-265. van der Walt, J.P. 1984c. Brettanomyces Kufferath et van Laer. In: N.J.W Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 562-576. van der Walt, J.P. 1987. The yeasts - a conspectus. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 19-32 (Stud. Mycol. 30, 19-31). van der Walt, J.P. 1992. The Lipomycetaceae, a model family for phylogenetic studies. Antonie van Leeuwenhoek 62, 247-250. van der Walt, J.P, and P.B. Baker. 1978. Candida fermenticarens - a new yeast from arboricole hchen. BothaHa 12, 561-562. van der Walt, J.P, and VK. Hopsu-Havu. 1976. A colour reaction for the differentiation of ascomycetous and hemibasidiomycetous yeasts. Antonie van Leeuwenhoek 42, 157-163. van der Walt, J.P, and E. Johannsen. 1973. The perfect state of Torulopsis magnoliae. Antonie van Leeuwenhoek 39, 635-647. van der Walt, J.P, and E. Johannsen. 1974. Ascospores in Torulopsis dattila (Kluyver) Lodder. Antonie van Leeuwenhoek 40, 275-279. van der Walt, J.P, and E. Johannsen. 1975a. The genus Torulaspora Lindner. CSIR Res. Rep. No. 325, 1-23.

1007

van der Walt, J.P, and E. Johannsen. 1975b. Hansenula lynferdii sp. nov. Antonie van Leeuwenhoek 41, 13-16. van der Walt, J.P., and E. Johannsen. 1975c. Pichia philogaea sp. nov. Antonie van Leeuwenhoek 41, 173-177. van der Walt, J.P, and E. Johannsen. 1975d. Trichosporon terrestre sp. nov. Antonie van Leeuwenhoek 41, 361-365. van der Walt, J.P., and E. Johannsen. 1978. The genus Debaryozyma van der Walt et Johannsen, nom. nov. Persoonia 10, 146-148. van der Walt, J.P, and E. Johannsen. 1980. Debaryozyma yamadae spec. nov. (Saccharomycetaceae). J. Gen. Appl. Microbiol. 26, 217-222. van der Walt, J.P., and E. Johannsen. 1984. Kluyueromyces van der Walt emend, van der Walt. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 224-251. van der Walt, J.P, and N.VD.W Liebenberg. 1973a. The yeast genus Wickerhamiella gen. nov. (Ascomycetes). Antonie van Leeuwenhoek 39, 121-128. van der Walt, J.P, and N.VD.W. Liebenberg. 1973b. Agglutinative mating types of Saccharomyces transuaalensis. Antonie van Leeuwenhoek 39, 629-633. van der Walt, J.P, and T. Nakase. 1973. Candida homilentoma a new yeast from South African insect sources. Antonie van Leeuwenhoek 39, 449-453. van der Walt, J.P, and E.E. Nel. 1963. Saccharomyces uanudenii nov. spec. Mycopathol. Mycol. Appl. 20, 71-74. van der Walt, J.P, and E.E. Nel. 1968. Candida edax sp. n. Antonie van Leeuwenhoek 34, 106-108. van der Walt, J.P, and A. Opperman. 1983. Pichia euphorbiae sp. nov, a new haploid heterothallic yeast species. Antonie van Leeuwenhoek 49, 51-59. van der Walt, J.P, and M.J. Pitout. 1969. Ploidy differences in Sporobolomyces salmonicolor and Candida albicans. Antonie van Leeuwenhoek 35, 227-231. van der Walt, J.P, and D.B. Scott. 1970. Bullera dendrophila sp. n. Antonie van Leeuwenhoek 36, 383-387. van der Walt, J.P, and D.B. Scott. 1971a. Pichia ambrosiae sp. n., a new auxiliary ambrosia fungus. Antonie van Leeuwenhoek 37, 15-20. van der Walt, J.P, and D.B. Scott. 1971b. The yeast genus Saccharomycopsis Schionning. Mycopathol. Mycol. Appl. 43, 2 7 9 288. van der Walt, J.P, and D.B. Scott. 1971c. Pichia xylopsoci, a new yeast from South African insect sources. Mycopathol. Mycol. Appl. 44, 321-324. van der Walt, J.P, and D.B. Scott. 197Id. Saccharomycopsis synnaedendra, a new yeast fi-om South African insect sources. Mycopathol. Mycol. Appl. 44, 101-106. van der Walt, J.P, and I.T. Tscheuschner. 1956a. Pichia uanriji n. sp. isolated from soil. J. Gen. Microbiol. 15, 4 5 9 ^ 6 1 . van der Walt, J.P, and I.T. Tscheuschner. 1956b. Saccharomyces delphensis nov. spec, a new yeast from South African dried figs. Antonie van Leeuwenhoek 22, 162-166. van der Walt, J.P, and I.T. Tscheuschner. 1956c. Saccharomyces pretoriensis n. sp. - from South African soil. J. Gen. Microbiol. 14, 485^86. van der Walt, J.P., and I.T. Tscheuschner. 1956d. Saccharomyces capensis nov. spec, a new yeast from South Afi-ican grape must. Antonie van Leeuwenhoek 22, 257-260. van der Walt, J.P, and I.T. Tscheuschner. 1957a. Three new yeasts. Antonie van Leeuwenhoek 23, 184-190. van der Walt, J.P., and I.T. Tscheuschner. 1957b. Hanseniaspora uineae sp. nov Trans. Br. Mycol.Soc. 40, 211-212. van der Walt, J.P, and WC. van der Klift. 1972. Pichia melissophila sp. n., a new osmotolerant yeast from apiarian sources. Antonie van Leeuwenhoek 38, 361-364. van der Walt, J.P, and A.E. van Kerken. 1959. The wine yeasts of the Cape. Part II. The occurrence of Brettanomyces intermedius and Brettanomyces schanderlii in South African table wines. Antonie van Leeuwenhoek 25, 145-151.

1008

References

van der Walt, J.P., and A.E. van Kerken. 1960. Torulopsis domercqii nov. spec. Antonie van Leeuwenhoek 26, 314-316. van der Walt, J.P., and A.E. van Kerken. 1961a. The wine yeasts of the Cape. Part V Studies on the occurrence of Brettanomyces intermedius and Brettanomyces schanderlii. Antonie van Leeuwenhoek 27, 81-90. van der Walt, J.P., and A.E. van Kerken, 1961b. Three new anascosporogenous yeasts. Antonie van Leeuwenhoek 27, 206-212. van der Walt, J.P., and A.E. van Kerken. 1961c. Candida ingens nov. spec. Antonie van Leeuwenhoek 27, 284—286. van der Walt, J.P., and J.A. von Arx. 1980. The yeast genus Yarrowia gen. nov. Antonie van Leeuwenhoek 46, 517-521. van der Walt, J.P., and J.A. von Arx. 1985. The septal ultrastructure of Hormoascus ambrosiae and the emendation of the genus Hormoascus. Syst. Appl. Microbiol. 6, 90-92. van der Walt, J.P., and D. Yarrow. 1984a. Methods for the isolation, maintenance, classification and identification of yeasts. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 45-104. van der Walt, J.P., and D. Yarrow. 1984b. The genus Arxiozyma gen. nov. (Saccharomycetaceae). S. Afr. J. Bot. 3, 340-342. van der Walt, J.P., E.E. Nel and A.E. van Kerken. 1966. Kluyueromyces wikenii and Kluyueromyces cicerisporus spp. n. Antonie van Leeuwenhoek 32, 393-398. van der Wah, J.P, D.B. Scott and WC. van der Klift. 1971a. Four new, related Candida species from South Afi-ican insect sources. Antonie van Leeuwenhoek 37, 449-460. van der Walt, J.P, D.B. Scott and WC. van der Klift. 1971b. Five new Torulopsis species from South African insect sources. Antonie van Leeuwenhoek 37, 461^71. van der Walt, J.P, D.B. Scott and WC. van der Klift. 1972. Six new Candida species from South African insect sources. Mycopathol. Mycol. Appl. 47, 221-236. van der Walt, J.P, E. Johannsen and T. Nakase. 1973. Candida naeodendra, a new species of the Candida diddensii group. Antonie van Leeuwenhoek 39, 491^95. van der Walt, J.P, M.B. Taylor and N.VD.W Liebenberg. 1977. Ploidy, ascus formation and recombination in Torulaspora (Debaryomyces) hansenii. Antonie van Leeuwenhoek 43, 205-218. van der Walt, J.P, E. Johannsen and D. Yarrow. 1978. Torulopsis geochares and Torulopsis azyma, two new haploid species of ascomycetous affinity. Antonie van Leeuwenhoek 44, 97-104. van der Walt, J.P, A.C.M. Weijman and J.A. von Arx. 1981. The anamorphic yeast genus Myxozyma gen. nov. Sydowia. Ann. Mycol. Ser. II, 34, 191-198. van der Walt, J.P, D. Yarrow, A. Opperman and L. Halland. 1982. Pichia kodamae sp. nov,, a new homothallic yeast species. J. Gen. Appl. Microbiol. 28, 155-160. van der Wah, J.P, N.P Ferreira and PD.G. Richards. 1986a. New basidiomycetous yeasts from South Africa I: Sporobolomyces kluyuerinielii. Antonie van Leeuwenhoek 52, 431^36. van der Walt, J.P, E. Johannsen, A. Opperman and L. Halland. 1986b. Kluyueromyces yarrowii sp. nov., a haploid, heterothallic, arboreal species. Syst. Appl. Microbiol. 8, 208-212. van der Walt, J.P, N.P. Ferreira and R.L. Steyn. 1987a. Candida lyxosophila sp. nov., a new D-xylose fermenting yeast from southern Africa. Antonie van Leeuwenhoek 53, 93-97. van der Walt, J.P, J.A. von Arx, N.P Ferreira and PD.G. Richards. 1987b. Zygozyma gen. nov, a new genus of the Lipomycetaceae. Syst. Appl. Microbiol. 9, 115-120. van der Wah, J.P, Y. Yamada, T Nakase and PD.G. Richards. 1987c. Myxozyma geophila and Myxozyma lipomycoides spp. nov., two new anamorphic, Lipomycetaceous yeasts from southern Africa. Syst. Appl. Microbiol. 9, 121-124. van der Wah, J.P, Y. Yamada, N.P Ferreira and PD.G. Richards. 1987d. New basidiomycetous yeast from southern Africa, II. Sterigmatomyces wingfieldii sp. n. Antonie van Leeuwenhoek 53, 137-142. van der Wah, J.P, Y. Yamada, N.P Ferreira and PD.G. Richards. 1988. New basidiomycetous yeasts from South Africa III. Sporobolomyces

phyllomatis sp. nov. (Sporobolomycetaceae). Antonie van Leeuwenhoek 54, 201-206. van der Wah, J.P, Y Yamada, N.P Ferreira and PD.G. Richards. 1989a. New basidiomycetous yeasts from South Africa IV Sporobolomyces phyHades sp. nov, characterized by the coenzyme Q9 system (Sporobolomycetaceae). Antonie van Leeuwenhoek 55, 189-195. van der Walt, J.P, M.Th. Smith and Y Yamada. 1989b. Debaryomyces udenii, sp. nov. (Saccharomycetaceae), a new species from soil. Antonie van Leeuwenhoek 56, 233-239. van der Walt, J.P, M.Th. Smith, Y Yamada, T. Nakase and PD.G. Richards. 1989c. Lipomyces japonicus sp, nov. from Japanese soil. Syst. Appl. Microbiol. 11, 302-304. van der Wah, J.P, M.Th. Smith, Y Yamada and PD.G. Richards. 1989d. Zygozyma arxii sp. n. (Lipomycetaceae), a new species from southern Afi-ica. Syst. Appl. Microbiol. 12, 288-290. van der Walt, J.P, I. Spencer-Martins, Y Yamada and PD.G, Richards. 1989e. Myxozyma kluyveri sp. nov. (Candidaceae), a new species from southern Africa. Antonie van Leeuwenhoek 55, 297-302. van der Walt, J.P, A. Botha and A. Eicker. 1990a. Ferrichrome production by Lipomycetaceae. Syst. Appl. Microbiol. 13, 131-135. van der Walt, J.P, M.J. Wingfield and Y Yamada. 1990b. Zygozyma smithiae sp. n. (Lipomycetaceae), a new ambrosia yeastfi-omsouthern Africa. Antonie van Leeuwenhoek 58, 95-98. van der Walt, J.P, M.Th. Smith and Y Yamada. 1990c. Arxula gen. nov. (Candidaceae), a new anamorphic, arthroconidial yeast genus. Antonie van Leeuwenhoek 57, 59-61. van der Wah, J.P, M.J. Wingfield, M.Th. Smith and WH. Batenburg-van der Vegte. 1991. Septal micropores in Zygozyma and their taxonomic significance. Antonie van Leeuwenhoek 59, ll-'^O. van Dijken, J.P, and W Harder. 1974. Optimal conditions for the enrichment and isolation of methanol-assimilating yeasts. J. Gen. Microbiol. 84,409^11. van Eijk, G.W, and H.J. Roeymans. 1982. Distribution of carotenoids and sterols in relation to the taxonomy of Taphrina and Protomyces. Antonie van Leeuwenhoek 48, 257-264. Van Etten, J.L., and S.N. Freer. 1978. Simple procedure for disruption of fiingal spores. Appl. Environ. Microbiol. 35, 622-623. van Iterson, G., L.E. den Dooren de Jong and J. Kluyver. 1940. Martinus Willem Beijerinck, his life and his work. Martinus Nijhoflf, The Hague, 192pp. van Laer, H. 1902. Note sur une levure speciale tres commune dans les bieres a fermentation haute. Bull. Soc. Chim. Belg. 16, 177-181. van Oorschot, C.A.N. 1980. A revision of Chrysosporium and allied genera. Stud. Mycol. 20, 1-89. van Oorschot, C.A.N., and G.S. de Hoog. 1981. Dimorphic behaviour and taxonomy of Trichosporiella sporotrichoides. Antonie van Leeuwenhoek 47, 353-366. van Rij, N.J.W, and O. Verona. 1949. Sopra alcuni lieviti delle olive. Atti Accad. Naz. Lincei 7, 249-253. Van Rinsum, J., EM. Klis and H. Van Den Ende. 1991. Cell wall glucomannoproteins of Saccharomyces cereuisiae mnn9. Yeast 7, Ill-

lie.

van Uden, N. 1962. On the nomenclature of the genus Metschnikowia Kamienski. Rev Biol. 3, 95-96. van Uden, N., and L. Assis-Lopes. 1953a. Zur Kenntnis von Kloeckera lodderi sp. nov. Arch. Mikrobiol. 19, 262-266. van Uden, N., and L. Assis-Lopes. 1953b. Zur Kenntnis von Candida castellanii sp. nov. Zugleich ein Beitrag zur Systematik von Candida parakrusei und Candida krusoides. Arch. Mikrobiol. 18, 356-361. van Uden, N., and L. Assis-Lopes. 1957. Fermentation of raflfinose in the absence of invertase by Saccharomyces italicus Castelli var. melibiosi nov var. Port. Acta Biol., Ser. A, 4, 323-327. van Uden, N., and H.R. Buckley. 1970. Candida Berkhout. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 893-1087. van Uden, N., and R. Castelo-Branco. 1961. Metschnikowiella zobellii sp. nov. and M. krissii, sp. nov, two yeasts from the Pacific Ocean pathogenic for Daphnia magna. J. Gen. Microbiol. 26, 141-148.

References van Uden, N., and L. do Carmo-Sousa. 1957. Yeast from the bovine caecum. J. Gen. Microbiol. 16, 385-395. van Uden, N., and L. do Carmo-Sousa. 1959. Further studies on the significance of temperature relations and vitamin deficiency patterns in yeast taxonomy. Port. Acta Biol., Ser. B 6, 239-256. van Uden, N., and M. Farinha. 1958. On the significance of temperature relations and vitamin deficiency patterns in the delimitation of yeast species. Port. Acta Biol, Ser. B, 6, 161-178. van Uden, N., and M.C. Kolipinski. 1962. Torulopsis haemulonii nov. spec, a yeast from the Atlantic Ocean. Antonie van Leeuwenhoek 28, 78-80. van Uden, N., and M. Vidal-Leiria. 1970. Torulopsis Berlese. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. NorthHolland, Amsterdam, pp. 1235-1308. van Uden, N., and S. Windisch. 1968. Candida friedrichii sp. n., a melibiose-fermenting yeast. Antonie van Leeuwenhoek 34, 270-274. van Uden, N., and C.E. Zobell. 1962. Candida marina nov. spec, Torulopsis torresii nov. spec, and T. maris nov. spec, three yeasts from the Torres Strait. Antonie van Leeuwenhoek 28, 275-283. van Wyk, RW.J., and M.J. Wingfield. 1991. Ultrastructure of ascosporogenesis in Ophiostoma davidsonii. Mycol. Res. 95, 7 2 5 730. Van Zyl, J.A., and L.DeW. du Plessis. 1961. The microbiology of South Afi^ican wine making. I. The yeasts occurring in vineyards, musts, and wines, S. Afr. J. Sci. 4, 393-^03. Vanbreuseghem, R. 1948. Sur une levure, Candida truncata, n. sp. isolee d'une dermatose presentee par le Dr. Eyckmans. Arch. Belg. Dermatol. Syphiligr. 4, 307-313. Vanbreuseghem, R., and M. Takashio. 1970. An atypical strain of Cryptococcus neoformans (Sanfelice) Vuillemin 1894. Part II. Cryptococcus neoformans var. gattii var. nov. Ann. Soc Beige Med. Trop. 50, 695-702. Vancanneyt, M., R. Coopman, R. Tytgat, G.L. Hennebert and H. Kersters. 1994. Whole-cell protein patterns, DNA base compositions and coenzyme Q types in the yeast genus Cryptococcus Kiitzing and related taxa. Syst. Appl. Microbiol. 17, 65-75. Varga, J., C. Vagvolgyi, A. Nagy, I. Pfeiffer and L. Ferenczy. 1995. Isoenzyme, RFLP and RAPD characterization of Phaffia rhodozyma Miller et al. Int. J. Syst. Bacteriol. 45, 173-177. Varma, A., and K.J. Kwon-Chung. 1989. Restriction fragment polymorphism in mitochondrial DNA of Cryptococcus neoformans. J. Gen. Microbiol. 135, 3353-3362. Vaughan-Martini, A. 1984. Comparazione dei genomi del lievito Pichia stipitus e di alcune specie imperfette affini. Ann. Fac Agrar. Univ. Perugia 38, 331-335. Vaughan-Martini, A. 1989. Saccharomyces paradoxus comb, nov., a newly separated species of the Sacchaomyces sensu stricto complex based upon nDNA/nDNA homologies. Syst. Appl. Microbiol. 12, 179182. Vaughan-Martini, A. 1991. Evaluation of phylogenetic relationships among fission yeast by nDNA/nDNA reassociation and conventional taxonomic criteria. Yeast 7, 73-78. Vaughan-Martini, A. 1995. Saccharomyces barnetti and Saccharomyces spencerorum: two new species oi Saccharomyces sensu lato (van der Walt). Antonie van Leeuwenhoek 68, 111-118. Vaughan-Martini, A., and S. Barcaccia. 1996. A reconsideration of species related to Saccharomyces dairensis Naganishi. Int. J. Syst. Bacteriol. 46, 313-317. Vaughan-Martini, A., and C.P. Kurtzman. 1985. Deoxyribonucleic acid relatedness among species of the genus Saccharomyces sensu stricto. Int. J. Syst. Bacteriol. 35, 508-511. Vaughan-Martini, A., and C.P. Kurtzman. 1988. Deoxyribonucleic acid relatedness among species of Saccharomyces sensu lato. Mycologia 80, 241-243. Vaughan-Martini, A., and A. Martini. 1985. Perfect-imperfect relationships within the yeast genus Kluyveromyces. Ann. Microbiol. 35, 93-97. Vaughan-Martini, A., and A. Martini. 1987a. Three newly delimited

1009

species of Saccharomyces sensu stricto. Antonie van Leeuwenhoek 53, 77-84. Vaughan-Martini, A., and A. Martini. 1987b. Taxonomic revision of the yeast genus Kluyveromyces by nuclear deoxyribonucleic acid reassociation. Int. J. Syst. Bacteriol. 37, 380-385. Vaughan-Martini, A., and A. Martini. 1993. A taxonomic key to the genus Saccharomyces. Syst. Appl. Microbiol. 16, 113-119. Vaughan-Martini, A., and P. Pollacci. 1996. Synonymy of the yeast genera Saccharomyces Meyen ex Hansen and Pachytichospora van der Walt. Int. J. Syst. Bacteriol. 46, 318-320. Vaughan-Martini, A., and G. Rosini. 1989. Killer relationships within the yeast genus Kluyveromyces. Mycologia 81, 317-321. Vaughan-Martini, A., D.G. Sidenberg and M.A. Lachance. 1987. Analysis of a hybrid between Kluyveromyces marxianus and Kluyveromyces thermotolerans by physiological profile comparison, isoenzyme electrophoresis, DNA reassociation, and restriction mapping of ribosomal DNA. Can. J. Microbiol. 33, 971-978. Vaughan-Martini, A., G. Rosini and A. Martini. 1988. Killer sensitivity patterns as a tool for the fingerprinting of strains within the yeast species Kluyveromyces lactis and K. marxianus. Biotechnol. Techniques 2, 293-296. Vaughan-Martini, A., A. Martini and G. Cardinali. 1993. Electrophoretic karyotyping as a taxonomic tool in the genus Saccharomyces. Antonie van Leeuwenhoek 62, 145-156. Vaughan-Martini, A., S. Barcaccia and P. Pollacci. 1996. Saccharomyces rosinii: a new species of Saccharomyces sensu lato. Int. J. Syst. Bacteriol. 46, 615-618. Veerkamp, J., and W. Gams. 1983. Los hongos de Colombia. VII. Some new species of soil fimgi from Colombia. Caldesia 13, 709-717. Verdun, P. 1912. Atelosaccharomyces hominis (Vuillemin 1901) Verdun. In: P. Verdun, Precis de Parasitologic Humaine, 2me ed. Doin et Fils, Paris, pp. 730-731. Verdun, P. 1913. Precis de Parasitologic Humaine, 2nd edn. Doin, Paris. Verona, O. 1935. Di due nuove specie di Torulopsis a pigmento rosso isolate dal terreno. Arch. Protistenkd. 85, 312-318. Verona, O., and R. Ciferri. 1938. Revisione dei lievitia sporigeni del genere Sporobolomyces Kluyver et van Niel. Atti 1st. Bot. Univ. Pavia, Ser. IV, 10, 241-255. Verona, O., and G. Florenzano. 1947. Su di una nuova specie di Brettanomyces isolata da uva. Rend. Accad. Naz. Lincei, Ser. VIII, 3, 383-387. Verona, O., and G. Luchetti. 1936. Ricerche microbiologiche su di alcuni vini ed alcune uve delle marche. Boll. Regio Inst. Super. Agrar. Pisa 12,256-311. Verona, O., and G. Luchetti. 1941. Descrizione dei lieviti delle uve, dei mosti e dei vini. Garoglio-Tratt. Enol. 2, 288-297. Verona, O., and G. Picci. 1958. A new species of Trichosporon: Trichosporon hellenicum n. sp. Ann. Microbiol. Enzimol. 8, 106-108. Verona, O., and A. Rambelli. 1962a. Notizie intorno ai caratteri di alcune specie di Taphrina in fase saprofitaria (Saprotaphrina). Ann. Fac. Agric Univ. Pisa n.s. 22, 1-36. Verona, O., and A. Rambelli. 1962b. Presenza di lieviti e di specie lievitiforni in lettiere di bosco. Ann. Fac. Agric. Univ. Pisa n.s. 22, 37-46. Verona, O., and A. Rambelli. 1962c. About two isolates labelled Taphrina farlowii Sad. and Taphrina californica Mix. Phytopathol. Z. 44, 169-272. Verona, O., and O. Zardetto de Toledo. 1954. Indagini speciologiche sopra alcuni lieviti isolati dai fiori di vite nel territorio di S. Paolo in Brasile. Ann. Fac. Agrar. Pisa 15, 163-191. Verona, O., and O. Zardetto de Toledo. 1959a. Considerazioni interno ad Endomycopsis fibuliger (Lindner) Dekker. Mycopathol. Mycol. Appl. 10, 209-215. Verona, O., and O. Zardetto de Toledo. 1959b. Intorno ad un lievito osmofilo sistematicamente prossimo a Saccharomyces elegans Lodder et Kreger-van Rij. Mycopathol. Mycol. Appl. 11, 103-108. Verrall, A.F. 1943. Fungi associated with certain ambrosia beetles. J. Agric. Res. 66, 135-144.

1010

References

Vesonder, R.F., F.H. Stodola, W.K. Rohwedder and D.B. Scott. 1970. 2-D-Hydroxyhexadecanoic acid: a metabolic product of the yeast Hansenula sydowiorum. Can. J. Chem. 48, 1985-1986. Vezinhet, K, B. Blondin and J. Hallet. 1990. Chromosomal DNA patterns and mitochondrial DNA polymorphisms as tools for identification of oenological strains of Saccharomyces cereuisiae. Appl. Microbiol. Biotechnol. 32, 568-571. Vidal-Leiria, M. 1966a. Torulopsis mogii sp. n. Antonie van Leeuwenhoek 32, 312-314. Vidal-Leiria, M. 1966b. Torulopsis vanderwaltii sp. nov. Antonie van Leeuwenhoek 32, 4 4 7 ^ 4 9 . Vidal-Leiria, M. 1967. Candida mogii sp. n., a halotolerant yeast associated with miso fermentation. Antonie van Leeuwenhoek 33, 341-344. Vidal-Leiria, M., and N. van Uden. 1963. Candida siluae sp. n., a yeast isolated from humans and horses. Antonie van Leeuwenhoek 29, 2 6 1 264. Vilgalys, R., and M. Hester. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. J. Bacteriol. 172, 4 2 3 8 ^ 2 4 6 . Viljoen, B.C., and J.L.F. Kock. 1989a. A taxonomic study of the yeast genus Candida Berkhout. Syst. Appl. Microbiol. 12, 91-102. Viljoen, B.C., and J.L.F. Kock. 1989b. The genus Candida Berkhout nom. conserv. - a historical account of its delimitation. Syst. Appl. Microbiol. 12, 183-190. Viljoen, B.C., J.L.F. Kock and RM. Lategan. 1986a. Long-chain fatty acid composition of selected genera of yeasts belonging to the Endomycetales. Antonie van Leeuwenhoek 52, 45-51. Viljoen, B.C., J.L.F Kock and RM. Lategan. 1986b. Fatty acid composition as a guide to the classification of selected genera of yeasts belonging to the Endomycetales. J. Gen. Microbiol. 132, 2397-2400. Viljoen, B.C., J.L.F. Kock and T.J. Britz. 1988. The significance of longchain fatty acid composition and other phenotypic characteristics in determining relationships among some Pichia and Candida species. J. Gen. Microbiol. 134, 1893-1899. Vincent, W.F. 1988. Microbial ecosystems of Antarctica. Cambridge University Press, Cambridge, 304pp. Vishniac, H.S. 1985a. Cryptococcus socialis sp. nov. and Cryptococcus consortionis sp. nov. Int. J. Syst. Bacteriol. 35, 119-122. Vishniac, H.S. 1985b. Cryptococcus friedmannii, a new species of yeast fi"om the Antarctic. Mycologia 77, 149-153. Vishniac, H.S. 1994. Simulated in situ growth and survival of an indigenous soil yeast, Cryptococcus albidus. Abstracts, Fifi;h International Mycological Congress, August 14-21, Vancouver, BC, p. 234. Vishniac, H.S., and S. Baharaeen. 1982. Five new basidioblastomycetous yeast species segregated from Cryptococcus vishniacii emend, auct., an Antarctic yeast species comprising four new varieties. Int. J. Syst. Bacteriol. 32, 4 3 7 ^ 4 5 . Vishniac, H.S., and W.R Hempfling. 1979. Cryptococcus vishniacii sp. nov., an Antarctic yeast. Int. J, Syst. Bacteriol. 29, 153-158. Vishniac, H.S., and C.R Kurtzman. 1992. Cryptococcus antarcticus sp. nov. and Cryptococcus albidosimilis sp. nov, Basidioblastomycetes from Antarctic soils. Int. J. Syst. Bacteriol. 42, 547-553. Viswanathan, R., and H.S. Randhawa. 1959. Candida uiswanathii sp. nov. isolated from a case of meningitis. Sci. Culture 25, 86. Vivoli, D., R. Avellaneda and E. de Bardessi. 1932. Glositis ulcerosa por Monilia argentina (n. sp.). Soc. Argent. Patol. Regional del Norte, Septima Reunion, pp. 239-277. von Arx, J.A. 1972. On Endomyces, Endomycopsis and related yeast-like fimgi. Antonie van Leeuwenhoek 38, 289-309. von Arx, J.A. 1977a. Notes on Dipodascus, Endomyces and Geotrichum with the description of two new species. Antonie van Leeuwenhoek 43, 333-340. von Arx, J.A. 1977b. Centraalbureau voor Schimmelcultures Baarn and Delft Progress Report 1976. Verh. K. Ned. Akad. Wet. Afd. Natuurkd. Reeks 2, 68, 84-107. von Arx, J.A. 1978. Centraalbureau voor Schimmelcultures Baarn and

Delft Progress Report 1977. Verh. K. Ned. Akad. Wet. Afd. Natuurkd. Reeks 2, 71, 175-195. von Arx, J.A. 1979a. Centraalbureau voor Schimmelcultures Progress Report 1978, Verh. K. Ned. Akad. Wet. Amsterdam Afd. Natuurkd. Reeks 2 73, 101-125. von Arx, J.A. 1979b. Propagation in the yeasts and yeast-like fiingi. In: B. Kendrick (Ed.), The Whole Fungus, Proc. 2nd Int. Mycol. Conf, Kananaskis, Vol. 2. National Museums of Canada, Ottawa, pp. 5 5 5 571. von Arx, J.A. 1981. The genera of ftingi sporulating in pure culture. J. Cramer, Vaduz, Switzerland, von Arx, J.A., and E. Miiller. 1984. Notes on some Ascomycetes. Sydowia Ann. Mycol. 37, 6-10. von Arx, J.A., and J.P. van der Walt. 1976. The ascigerous state of Candida chodatii. Antonie van Leeuwenhoek 42, 309-314. von Arx, J.A., and J.P. van der Walt. 1986. Are yeast cells of Endomycetales homologues of conidia of Eurotiales? Persoonia 13, 161-171. von Arx, J.A., and J.P. van der Walt. 1987. Ophiostomatales and Endomycetales. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 167-176 (Stud. Mycol. 30, 167-176). von Arx, J.A., and A.C.M. Weijman. 1979. Conidiation and carbohydrate composition in some Candida and Torulopsis species. Antonie van Leeuwenhoek 45, 547-555. von Arx, J.A., and D. Yarrow. 1984. The adventures of the yeast genus Endomycopsis Dekker. Antonie van Leeuwenhoek 50, 799-805. von Arx, J.A., L. Rodrigues de Miranda, M.Th. Smith and D. Yarrow. 1977. The genera of yeasts and the yeast-like fiingi. Stud. Mycol. 14, 1^2. von Arx, J.A., J.P van der Walt and N.VD.M. Liebenberg. 1982. The classification of Taphrina and other fiingi with yeast-like cultural states. Mycologia 74, 285-296. von Klopotek, A. 1967. Blastobotrys nivea, gen. nov, sp. nov. Arch. Mikrobiol. 58, 92-96. von Nageli, C. 1879. Theorie der Gahrung. Ein Beitrag zur Molekularphysiologie. Miinchen. von Richter, A.A. 1912. Uber einen osmophilen Organismus den Hefepilz Zygosaccharomyces mellis acidi sp. n. Mycol. Zentralbl. 1, 67-76. von Szilvinyi, A. 1934. Blastodendrion canis nov. sp.; ein Beitrag zur Diagnose und Systematik der asporogenen Sprosspilze. Zentralbl. Bakteriol Parasitenkd., Abt. II, 89, 284-299. von Szilvinyi, A., and L. Kaulich. 1948. Zur Kenntnis der Mikroflora Osterreichischer Kernobstmoste. Mitt. Versuchsanst. Garungsgewerbe Inst, angew. Mikrobiol. Hochschule Bodenkultur 4, 1-3. von Thumen, F. 1875. Mycotheca Universalis, No. 289. von Thumen, RK.A.E.J. 1874. Hedwigia 13, 97 (cited by Reddy and Kramer 1975). von Wettstein, R. 1885. Untersuchungen iiber einen neuen pflanzlichen Parasiten des menschlichen Korpers. Sitzungsber. Akad. Wiss. Wien, Abt. I, 19, 33-59. Voros-Felkai, G. 1961. Studies on arthrosporogenous yeasts. Acta Microbiol. Hung. 8, 95-102. Vuillemin, P. 1898. Les caracteres specifiques du champignon du muguet {Endomyces albicans). C.R. Acad. Sci. 127, 630-633. Vuillemin, P. 1901. Les blastomycetes pathogenes. Rev. Gen. Sci. 12, 732-751. Vuillemin, P. 1902. Trichosporum et trichospories. Arch. Parasitol. 5, 38-66. Vuillemin, P. 1911. Difference fondamentale entre le genre Monilia et les genres Scopulariopsis, Acrosporium et Catenularia. Bull. Soc. Mycol. France 27, 137-152. Vuillemin, P. 1931. Les Champignons Parasites et les Mycoses de I'Homme. Encyclopedic Mycologique, Vol. 2. Lechedevalier, Paris. Vustin, M.M., G.I. Naumov, LP Bab'eva and T.I. Naumova. 1982. Genosystematics of the yeast Williopsis saturnus - new biological species. Dokl. Akad. Nauk SSSR 267, 1481-1484. In Russian.

References Vustin, M.M., T.M. Shemyakina, LP. Bab'eva, I.S. Reshetova, E.A. Timokhina and S.P. Sineoki. 1988a. A new antibiotic factor produced by the yeast Williopsispratensis Babjeva et Reshetova. Dokl. Akad. Nauk SSSR 302, 724-727. In Russian. Vustin, M.M., E.A. Vavilova and S.R Sineoki. 1988b. The use of sensitivity to antibiotics produced by the representatives of the genera Williopsis and Zygowilliopsis for yeast identification. Mikrobiologiya 57, 653-657. In Russian. Vustin, M.M., T.M. Shemyakina, B.A. Rebentish, M.A. Bychkova, S.I. Kharitonov, S.V Belyaev, E.A. Timokhina and S.R Sineoki. 1989. A killer protein produced by the yeast Hansenula anomala (Hansen) H. et R Sydow. Dokl. Akad. Nauk SSSR 308, 1251-1255. In Russian. Vustin, M.M., E.N. Kalina, I.R Bab'eva, I.S. Reshetova and S.R Sineoki. 1990. Antibiotic activity in the yeast of the genus Metschnikowia Kamienski. Dokl. Akad. Nauk SSSR 313, 207-211. In Russian. Vustin, M.M., LP. Bab'eva, I.S. Reshetova, T.M. Shemyakina and S.P. Sineoki. 1991. Taxonomic differentiation of basidiomycetous yeasts by sensitivity to killer toxin of Williopsis pratensis. Mikrobiologiya 60, 345-349. In Russian. Wagenbach, M., K. O'Rourke, L. Vitez, A. Wieczorek, S. Hoffman, S. Durfee, J. Tedesco and G. Stetler. 1991. Synthesis of wild type and mutant human hemoglobins in Saccharomyces cerevisiae. Bio/ Technology 9, 57-61. Walker, ID., and R.S. Pore. 1978. Growth of Prototheca isolates on «-hexadecane and mixed-hydrocarbon substrate. Appl. Environ. Microbiol. 35, 694-697. Walker, L.B. 1931. Studies on Ascoidea rubescens. I. History and development. Mycologia 23, 51-76. Walker, L.B. 1935. Studies on Ascoidea rubescens. II. Cytological observations. Mycologia 27, 102-127. Walker, W.F. 1984. 5S rRNA sequences from Atractiellales, and basidiomycetous yeasts and fungi imperfecti. Syst. Appl. Microbiol. 5, 352-359. Walker, W.F. 1985a. 5S ribosomal RNA sequences from ascomycetes and evolutionary implications. Syst. Appl. Microbiol. 6, 48-53. Walker, W.E 1985b. 5S and 5.8S ribosomal RNA sequences and protist phylogenetics. Bio Systems 18, 269-278. Walker, W.F., and W.F. Doolittle. 1982. Redividing the basidiomycetes on the basis of 5S rRNA nucleotide sequences. Nature (London) 299, 723-724. Walker, W.E, and W.E Doolittle. 1983. 5S rRNA sequences from eight basidiomycetes and fungi imperfecti. Nucleic Acid Res. 11, 76257630. Walmsley, R.M., B.M. Wikinson and T.H. Kong. 1989. Genetic fingerprinting for yeasts. Biotechnology 7, 1168-1170. Walsh, T.J., G.P Melcher, M.G. Rinaldi, J. Lecciones, D.A. McGough, P Kelly, L Lee, D. Callender, M. Rubin and PA. Pizzo. 1990. Trichosporon beigelii, an emerging pathogen resistant to amphotericin B. J. Clin. Microbiol. 28, 1616-1622. Walters, L.S. 1943. Studies of yeast causing defects in beer II. The distinguishing characters of Torulopsis cylindrica nov. sp., a yeast causing a turbidity and unpleasant taste and smell in beer. J. Inst. Brew. 59, 253-256. Wang, C.J.K., and R.A. Zabel. 1990. Identification Manual for Fungi from Utility Poles in the Eastern United States. Allen Press, Lawrence, KS. Ward, H.M. 1892. The ginger-beer plant, and the organisms composing it: a contribution to the study of fermentation - yeasts and bacteria. Philos. Trans. R. Soc. London 183, 125-197. Ward, T.J., and J.L. Baker. 1929. Saccharomyces festinans. J. Inst. Brew. 35, 4 6 6 ^ 6 8 . Watanabe, K., Y. Shimada, K. Kawaharada, K. Suzuki and F. Tanaka. 1973. Process for fermentative production of yeast cells. US Patent 3 725200. Watson, J.L., and C.L. Kramer. 1974. Fatty acid ratios of lipid solvent fractions in Taphrina. Mycologia 66, 773-779. Watson, K.G. 1987. Temperature relations. In: A.H. Rose and

1011

J.S. Harrison (Eds.), The Yeasts, Vol. 2, Yeasts and the Environment. Academic Press, London, pp. 41-71. Weber, G., F. Spaaij and J.P. van der Walt. 1992. Kluyveromyces piceae sp. nov, a new yeast species isolated from the rhizosphere of Picea abies (L.) Karst. Antonie van Leeuwenhoek 63, 239-244. Weber, U 1922. Beitrag zur Kenntnis der esterbildenden Hefen. Biochem. Z. 129, 208-216. Weete, J.D., M. Sancholle, J.-M. Touze-Soulet, J. Bradley and R. Dargent. 1985. Effects of triazoles on fiingi. III. Composition of a plasma membrane-enriched fraction of Taphrina deformans. Biochim. Biophys. Acta 812, 633-642. Wehmer, C. 1906. Durch Pilzenzyme bewirkte Starkeverzuckerung im Brennereigewerbe. Mycologie der Rumbrennerei und der Arrakbereitung. In: F. Lafar (Ed.), Handbuch der Technischen Mycologie. G. Fischer, Jena, pp. 319-342. Weidman, F.D. 1925. Exfoliative dermatitis in the Indian rhinoceros {Rhinoceros unicornis), with description of a new yeast species, Pityrosporum pachydermatis. In: H. Fox (Ed.), Report of the Laboratory and Museum of Comparative Pathology of the Zoological Society of Philadelphia, pp. 3 6 ^ 4 . Weigmann, H., and A. Wolff. 1909. Uber einige zum "Riibengeschmack" der Butter beitragende Mycelpilze. Zentralbl. Bakteriol. Parasitenkd. Abt. 2, 22, 657-671. Weijman, A.C.M. 1976. Cell wall composition and taxonomy of Cephaloascus fragrans and some Ophiostomataceae. Antonie van Leeuwenhoek 42, 315-324. Weijman, A.C.M. 1977. Carbohydrate composition and taxonomy of the genus Dipodascus. Antonie van Leeuwenhoek 43, 323-331. Weijman, A.C.M. 1979a. Carbohydrate patterns of Moniliella, Trichosporonoides and Hyalodendron. Stud. Mycol. 19, 76-80. Weijman, A.C.M. 1979b. Carbohydrate composition and taxonomy of Geotrichum, Trichosporon and allied genera. Antonie van Leeuwenhoek 45, 119-127. Weijman, A.C.M., and W.I. Golubev. 1987. Carbohydrate patterns and taxonomy of yeasts and yeast-like fiingi. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 361-371 (Stud. Mycol. 30, 361-371). Weijman, A.C.M., and L. Rodrigues de Miranda. 1983. Xylose distribution within and taxonomy of the genera Bullera and Sporobolomyces. Antonie van Leeuwenhoek 49, 559-562. Weijman, A.C.M., and L. Rodrigues de Miranda. 1988. Carbohydrate patterns of Candida, Cryptococcus and Rhodotorula species. Antonie van Leeuwenhoek 54, 535-543. Weijman, A.C.M., and J.P. van der Walt. 1989. Carbohydrate profiles and the taxonomic concept of the Lipomycetaceae. Stud. Mycol. 31, 193-199. Weijman, A.C.M., I.J.A. Vlug and G.W van Eijk. 1982. Carbohydrate patterns. Stud. Mycol. 22, 50-55. Weijman, A.C.M., L. Rodrigues de Miranda and J.P. van der Walt. 1988. Redefinition of Candida Berkhout and the consequent emendation of Cryptococcus Kiitzing and Rhodotorula Harrison. Antonie van Leeuwenhoek 54, 545-553. Weis, J.D. 1902. Four pathogenic torulae (Blastomycetes). J. Med. Res. 7,280-311. Weisburg, W.G., J.G. Tully, D.L. Rose, J.R Petzel, H. Oyaizu, D. Yang, L. Mandelco, J. Sechrest, T.B. Lawrence, J. Van Etten, J. Maniloff and C.R. Woese. 1989. A phylogenetic analysis of the mycoplasmas: basis for their classification, J. Bacteriol. 12, 6455-6467. Wells, D.E. 1954. Ascocybe, a new genus of lower ascomycetes. Mycologia 46, 37-51. Wells, K. 1994. Jelly ftmgi, then and now! Mycologia 86, 1 8 ^ 8 . Went, F.A.F.C, and H.C. Prinsen Geerligs. 1894. Over suiker- en alcoholvorming door organismen in verband met de verwerking der naproducten in rietsuikerfabrieken. Arch. Suikerind. Ned. Indie III. Meded. Proefst. Java-Suikerind., No. 13, 529-549. Wessels, J.G.H. 1986. Cell wall synthesis in apical hyphal growth. Int. Rev Cytol. 104, 37-79.

1012

References

Wessels, J.G.H. 1990. Role of cell wall architecture in fungal tip growth generation. In: LB. Heath (Ed.), Tip Growth in Plant and Fungal Cells. Academic Press, London, pp. 1-29. Westerdijk, J. 1933. CBS catalogue. Whiffen, A.J. 1948. The production, assay and antibiotic activity of Actidione, an antibiotic from Streptomyces griseus. J. Bacteriol. 56, 283-291. White, J.H., A.R. Butler and M.J.R. Stark. 1989. Kluyueromyces lactis toxin does not inhibit yeast adenyl cyclase. Nature 341, 666-668. White, T.L, T. Bruns, S. Lee and J. Taylor. 1990. Amplification and direct sequencing of fiangal ribosomal RNA genes for phylogenetics. In: N. Innis, D. Gelfand, J. Sninsky and T. White (Eds.), PCR Protocols: A Guide to Methods and Applications. Academic Press, New York, pp. 315-322. White, WL. 1942. A new Hemiascomycete. Can. J. Res. 20, 389-395. Wickerham, L.J. 1946. A critical evaluation of the nitrogen assimilation tests commonly used in the classification of yeasts. J. Bacteriol. 52, 293-301. Wickerham, L.J. 1951. Taxonomy of yeasts. Techn. Bull. 1029, U.S. Dept. Agr., Washington, D.C. Wickerham, L.J. 1952. Recent advances in the taxonomy of yeasts. Annu. Rev Microbiol. 6, 317-332. Wickerham, L.J. 1956. Influence of agglutination on zygote formation in Hansenula wingei, a new species of yeast. C.R. Trav. Lab. Carlsberg, Ser. Physiol. 26, 4 2 3 ^ 3 3 . Wickerham, L.J. 1958. Sexual agglutination of heterothallic yeasts in diverse taxonomic areas. Science 128, 1504-1505. Wickerham, L.J. 1960. Hansenula holstii, a new yeast important in the early evolution of the heterothallic species of its genus. Mycologia 52, 171-183. Wickerham, L.J. 1964a. A preliminary report on a perfect family of exclusively protosexual yeasts. Mycologia 56, 253-266. Wickerham, L.J. 1964b. A cadaver yeast and related species. Mycologia 56, 3 9 8 ^ 1 4 . Wickerham, L.J. 1965a. New heterothallic species of Hansenula. I. Hansenula fabianii. Mycopathol. Mycol. Appl. 26, 79-86. Wickerham, L.J. 1965b. New heterothallic species of Hansenula. II. Hansenula bimundalis and variety americana. Mycopathol. Mycol. Appl. 26, 87-103. Wickerham, L.J. 1966. Validation of the species Pichia guilliermondii. J. Bacteriol. 92, 1269. Wickerham, L.J. 1969a. Hybridization as a basis for speciation in the genus Hansenula. Proc. II Int. Symp. Yeasts, 1966, Bratislava, pp. 41^4. Wickerham, L.J. 1969b. New homothallic taxa of Hansenula. Mycopathol. Mycol. Appl. 37, 15-32. Wickerham, L.J. 1970a. Hansenula H. et P. Sydow. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 226-315. Wickerham, L.J. 1970b. Pachysolen Boidin et Adzet. In: J. Lodder (Ed.), The Yeasts, A Taxonomic Study, 2nd edn. North-Holland, Amsterdam, pp. 448-454. Wickerham, L.J., and K.A. Burton. 1948. Carbon assimilation tests for the classification of yeasts. J. Bacteriol. 56, 363-371. Wickerham, L.J., and K.A. Burton. 1952. Occurrence of yeast mating types in nature. J. Bacteriol. 63, 449-451. Wickerham, L.J., and K.A. Burton. 1954a. A simple technique for obtaining mating types in heterothallic diploid yeasts, with special reference to their uses in the genus Hansenula. J. Bacteriol. 67, 3 0 3 308. Wickerham, L.J., and K.A. Burton. 1954b. A clarification of the relationships of Candida guilliermondii to other yeasts by a study of their mating types. J. Bacteriol. 68, 594-597. Wickerham, L.J., and K.A. Burton. 1956a. Hybridization studies involving Saccharomyces lactis and Zygosaccharomyces ashbyii. J. Bacteriol. 71, 290-295. Wickerham, L.L, and K.A. Burton. 1956b. Hybridization studies involving Saccharomyces fragilis and Zygosaccharomyces dobzhanskii. J. Bacteriol. 71, 296-302.

Wickerham, L.J., and K.A, Burton. 1960. Heterothallism in Saccharomyces rouxii. J. Bacteriol. 80, 4 9 2 ^ 9 5 . Wickerham, L.J., and K.A. Burton. 1962. Phylogeny and biochemistry of the genus Hansenula. Bacteriol. Rev. 26, 382-397. Wickerham, L.J., and E. Duprat. 1945. A remarkable fission yeast, Schizosaccharomyces uersatilis nov. sp. J. Bacteriol. 50, 597-607. Wickerham, L.J., and C.R Kurtzman. 1971. Two new saturn-spored species oi Pichia. Mycologia 63, 1013-1018. Wickerham, L.J., and F.H. Stodola. 1960. Formation of extracellular sphingolipids by microorganisms. I. Tetraacetylphytosphingosine from Hansenula ciferrii. J. Bacteriol. 80, 484-491. Wickerham, L.J., L.B. Lockwood, O.G. Pettijohn and G.E. Ward. 1944. Starch hydrolysis and fermentation by the yeast Endomycopsis fibuliger J. Bacteriol. 48, AU-A21. Wickerham, L.J., M.H. Flickinger and R.M. Johnston. 1946a. The production of viho^^vmhy Ashbyagossypii. Arch. Biochem. 9, 95-98. Wickerham, L.J., M.H. Flickinger and K.A. Burton. 1946b. A modification of Henrici's vegetable-juice sporulation medium for yeasts. J. Bacteriol. 52, 611-612. Wickerham, L.J., C.R Kurtzman and A.I. Herman. 1970a. Sexual reproduction in Candida lipolytica. Science 167, 1141. Wickerham, L.J., C.R Kurtzman and A.I. Herman. 1970b. Sexuality in Candida lipolytica. In: D.G. Ahearn (Ed.), Recent Trends in Yeast Research, Spectrum, Vol. I. Georgia State University, Atlanta, GA, pp. 81-92. Wickes, B.L., and J.C. Edman. 1995. The Cryptococcus neoformans GAL7 gene and its use as an inducible promoter. Mol. Microbiol. 16, 1099-1109. Wickes, B.L., T.D.E. Moor and K.J. Kwon-Chung. 1994. Comparison of the electrophoretic karyotypes and chromosomal location of ten genes in the two varieties of Cryptococcus neoformans. Microbiol. 140, 543-550. Wickes, B.L., M.E. Mayorga, U. Edman and J.C. Edman. 1996. Dimorphism and haploid fruiting in Cryptococcus neoformans. Proc. Natl. Acad. Sci. 93, 7327-7331. Wickner, R.B. 1985. Killer yeasts. In: M.R. McGinnis (Ed.), Current Topics in Medical Mycology, Vol. 1. Springer, New York, pp. 286312. Wickner, R.B. 1989. Yeast virology. FASEB J. 3, 2257-2265. Wieringa, K.T 1956. The micro-organisms decomposing pectic substances in the dew retting process of flax. Neth. J. Agri. Sci. 4, 204-209. Will, H. 1910. Beitrage zur Kenntnis der Gattung Mycoderma nach Untersuchungen von Hans Leberle. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 28, 1-37. Will, H. 1913. Saccharomyces anamensis, die Hefe des neueren Amyloverfahrens. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 39, 2 6 53. Will, H. 1916. Beitrage zur Kenntnis der Sprosspilze ohne Sporenbildung, welche in Brauereibetrieben und in deren Umgebung vorkommen. VI. (Schluss)-Mitteilung. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 46, 226-281. Williamson, D.H., and D.J. Fennell. 1975. The use of fluorescent DNAbinding agent for detecting and separating yeast mitochondria DNA. In: D.M. Prescott (Ed.), Methods in Cell Biology, Vol. 12, Yeast Cells. Academic Press, New York, pp. 335-351. Williamson, PR. 1994. Biochemical and molecular characterization of the diphenol oxidase of Cryptococcus neoformans: Identification as a laccase. J. Bacteriol. 176, 656-664. Wilmotte, A., Y Van de Peer, A. Goris, S. Chapelle, R. De Baere, B. Nelissen, J.-M. Neefs, G.L. Hennebert and R. De Wachter. 1993. Evolutionary relationships among higher fiingi inferred from small ribosomal subunit RNA sequence analysis. Syst. Appl. Microbiol. 16, 436^44. Wilson, C , and RA. Whittaker. 1989. Factors affecting activity and stability of the Kluyueromyces lactis killer toxin. Appl. Environm. Microbiol. 55, 695-699. Wilson, C.L., and M.E. Wisniewski. 1989. Biological control of

References postharvest diseases of fruits and vegetables: an emerging technology. Annu. Rev. Phytopathol. 27, 4 2 5 ^ 4 1 . Wilson, C M . 1961. A cytological study of Ascocybe. Can. J. Bot. 39, 1605-1607. Wilson, D.E., J.E. Bennett and J.W. Bailey. 1968. Serologic grouping of Cryptococcus neoformans. Proc. Soc. Exp. Biol. Med. 127, 820-823. Wilson, T. 1984. Tomorrow's vaccines. Bio/Technology 2, 29-39. Windisch, S. 1940. Entwicklungsgeschichtliche Untersuchungen an Torulopsis pulcherrima (Lindner) Saccardo und Candida tropicalis (Castellani) Berkhout. Ein Beitrag zur Systematik der Garungsmonilien. Arch. Mikrobiol. 11, 368-390. Windisch, S. 1949. Sporobolomyces holsaticus n. sp. Arch. Mikrobiol. 14, 287-290. Windisch, S. 1951. Zur Biologic und Systematik des Milchschimmels und ahnlicher Formen. I. Der Milchschimmel {Endomyces lactis) und Endomyces magnusii. Beitr. Biol. Pfl. 28, 69-130. Windisch, S. 1952. Zur Biologic und Systematik des Milchschimmels und einiger ahnlicher Formen. II. Milchschimmelahnliche Pilze. Beitr. Biol. Pflanz. 29, 143-170. Windisch, S. 1953. Zur Biologie und Systematik der Pseudomonilia albomarginata Geiger. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 107, 84-98. Windisch, S. 1965. Uber zwei neue Pilzarten, Protendomycopsis domschii n.g., n. sp. und Endomyces laibachii n. sp. Beitr. Biol. Pflanz. 41, 337-358. Wingard, S.A. 1922. Yeast-spot of Lima beans. Phytopathology 12, 5 2 5 532. Winge, 6., and O. Laustsen. 1937. On two types of spore germination, and on genetic segregations in Saccharomyces, demonstrated through single-spore cultures. C.R. Trav. Lab. Carlsberg, Ser. Physiol. 22, 9 9 116. Winge, O., and C. Roberts. 1949. Inheritance of enzymatic characters in yeast, and the phenomenon of long-term adaptation. C. R. Trav. Lab. Carlsberg 24, 263-315. Winge, 6., and C. Roberts. 1954. Causes of deviations from 2:2 segregations in the tetrads of monohybrid yeasts. C.R. Trav. Lab. Carlsberg, Ser. Physiol. 25, 285-329. Wingfield, B.D., VJ. Southgate, I.S. Pretorius and H.J.J, van Vuuren. 1990. A K2 neutral Saccharomyces cereuisiae strain contains a variant K2 M genome. Yeast 6, 159-169. Winter, G. 1884. L. Rabenhorst's Kryptogamen-Flora von Deutschland, Osterreich und der Schweiz. Band I. Die Pilze. Abt. I., Verl. Eduard Kummer, Leipzig. Witte, V, B. Grossmann and C.C. Emeis. 1989. Molecular probes for the detection of Kluyveromyces marxianus chromosomal DNA in electrophoretic karyotypes of intergeneric protoplast fusion products. Arch. Microbiol. 152, 4 4 1 ^ 4 6 . Woese, C.R. 1987. Bacterial evolution. Microbiol. Rev 51, 221-271. Wojewoda, W 1981. Basidiomycetes (Podstawczaki), Tremellales (Trzgsakowe), Auriculariales (Uzakowe), Septobasidiales (Czerwcogrzybowe). In: S. Domanski (Ed.), Mala Flora Grzybo, Vol. 2. Panstwowe Wydawnictwo Naukowe, Warsaw. Wolff, G., and U. Kiick. 1990. The structural analysis of the mitochondrial SSU rRNA implies a close phylogenetic relationship between mitochondria from plants and from the heterotrophic alga Prototheca wickerhamii. Curr. Genet. 17, 347-351. Wolfram, S., and F. Zach. 1934a. Uber einige durch niedere Pilze verursachte Nagelerkrankungen beim Menschen. Arch. Dermatol. Syph. 169, 95-104. Wolfram, S., and F. Zach. 1934b. Uber durch niedere Pilze verursachte Nagelerkrankungen beim Menschen. Arch. Dermatol. Syph. 170, 6 8 1 694. Wong, G., K. Wells and R.J. Bandoni. 1985. Interfertility and comparative morphological studies of Tremella mesenterica. Mycologia 77, 36^9. Woods, D.R., and E.A. Bevan. 1968. Studies on the nature of the killer factor produced by Saccharomyces cereuisiae. J. Gen. Microbiol. 51, 115-126.

1013

Woollett, L.L., and L.R. Hedrick. 1970. Ecology of yeasts in polluted water. Antonie van Leeuwenhoek 36, 4 2 7 ^ 3 5 . Worsham, PL., and PL. Bolen. 1990. Killer toxin production in Pichia acaciae is associated with linear DNA plasmids. Curr. Genet. 18, 77-80. Wright, J.E. 1970. Agaricostilbum, a new genus of Deuteromycetes on palm spathes from Argentina. Mycologia 62, 679-682. Wright, J.E., R.J. Bandoni and F. Oberwinkler. 1981. Agaricostilbum: an auricularioid basidiomycete. Mycologia 73, 880-886. Xu Biru. 1986. Studies on the biological characteristics of Tremella fuciformis. J. Fujian Agric. College 15, 141-145. Yabe, K. 1897. On the origin of sake yeast (Sacch. sake). Bull. Imp. Univ Tokyo Coll. Agric. 3, 221-233. Yamada, K. 1977. Japan's most advanced industrial fermentation technology and industry. Int. Technol. Inf Inst. Tokyo. Yamada, K., and H. Machida. 1962. Studies on the production of lipase by microorganisms. Part I. The selection and identification of a new strain. Nippon Nogeikagaku Kaishii 36, 858-860. In Japanese. Yamada, K., and Y Ota. 1963. Studies on the production of lipase by microorganisms. Part IV Identification of a new strain and determination of its lipase activity. J. Agric. Chem. Soc. Japan 37, 649-652. Yamada, Y 1986a. The coenzyme Q system in strains of species in the anamorphic yeast genus Myxozyma. J. Gen. Appl. Microbiol. 32, 259-261. Yamada, Y 1986b. Holleya gen. nov, an ascosporogenous yeast genus for the Q9-equipped organism whose ascospores are needle shaped with smooth surfaces in their anterior half and concentric ridges in their posterior half and without appendage. J. Gen. Appl. Microbiol. 32, 4 4 7 ^ 4 9 . Yamada, Y, and K. Aizawa. 1987. Electrophoretic comparison of enzymes in strains of species in the genera Myxozyma (Cryptococcaceae) and Zygozyma (Lipomycetaceae). Trans. Mycol. Soc. Japan 28, 163-170. Yamada, Y, and I. Banno. 1984a. Fellomyces, a new anamorphic yeast genus for the Q10-equipped organisms whose conidium is freed by an end-break in the sterigma. J. Gen. Appl. Microbiol. 30, 523-525. Yamada, Y, and I. Banno. 1984b. The coenzyme Q system in strains of species in the genus Sterigmatomyces (Cryptococcaceae) and its teleomorphic genus Sterigmatosporidium. Trans. Mycol. Soc. Japan 25, 4 5 5 ^ 6 0 . Yamada, Y, and I. Banno. 1987a. Hasegawaea gen. nov, an ascosporogenous yeast genus for the organisms whose asexual reproduction is by fission and whose ascospores have smooth surfaces without papillae and which are characterized by the absence of coenzyme Q and by the presence of linoleic acid in cellular fatty acid composition. J. Gen. Appl. Microbiol. 33, 295-298. Yamada, Y, and I. Banno. 1987b. Hasegawaea japonica var. uersatilis, a new combination for Schizosaccharomyces japonicus var. uersatilis. J. Gen. Appl. Microbiol. 33, 547-548. Yamada, Y, and H. Kawasaki. 1989a. The molecular phylogeny of the Qg-equipped basidiomycetous yeast genera Mrakia Yamada et Komagata and Cystofilobasidium Oberwinkler et Bandoni based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 35, 173-183. Yamada, Y, and H. Kawasaki. 1989b. The genus Phaffia is phylogenetically separate from the genus Cryptococcus (Cryptococcaceae). Agric. Biol. Chem. 53, 2845-2846. Yamada, Y, and K. Komagata. 1983. Rhodotorula hasegawae sp. nov, a new asporogenous yeast species. J. Gen. Appl. Microbiol. 29, 3 2 3 326. Yamada, Y, and K. Komagata. 1987. Mrakia gen. nov, a heterobasidiomycetous yeast genus for the Q8-equipped, self-sporulating organisms which produce a unicellular metabasidium, formerly classified in the genus Leucosporidium. J. Gen. Appl. Microbiol. 33, 455^57. Yamada, Y, and T. Konda. 1984. The coenzyme Q system in strains of

1014

References

species in the genus Itersonilia, Sporobolomycetaceae. J. Gen. Appl. Microbiol. 30,313-315. Yamada, Y., and K. Kondo. 1972a. Taxonomic significance of coenzyme Q system in yeasts and yeast-like fiingi (1). In: A. KockovaKratochvilova and E. Minarik (Eds.), Yeasts. Models in Science and Technics, Proc. 1st Spec. Int. Symp. on Yeasts. Slovak Academy of Sciences, Bratislava, pp. 363-373. Yamada, Y, and K. Kondo. 1972b. Taxonomic significance of the coenzyme Q system in yeasts and yeast-like fiingi (2). In: G. Temi (Ed.), Fermentation Technology Today, Proc. IVth Int. Ferment. Symp., Soc. Ferment. Technol., Osaka, Japan, pp. 781-784. Yamada, Y, and K. Kondo. 1973. Coenzyme Q system in the classification of the yeast genera Rhodotorula and Cryptococcus, and the yeast-like genera Sporobolomyces and Rhodosporidium. J. Gen. Appl. Microbiol. 19, 59-77. Yamada, Y, and A. Matsumoto. 1988a. An electrophoretic comparison of enzymes in strains of species in the genus Mrakia Yamada et Komagata (Filobasidiaceae). J. Gen. Appl. Microbiol. 34, 201-208. Yamada, Y, and A. Matsumoto. 1988b. An electrophoretic comparison of enzymes in strains of species in the genera Lipomyces Lodder et Kreger-van Rij and Waltomyces Yamada et Nakase (Lipomycetaceae). Agric. Biol. Chem. 52, 2525-2530. Yamada, Y, and T. Nagahama. 1991. The molecular phylogeny of the ascomycetous yeast genus Holleya Yamada based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 37, 199-206. Yamada, Y, and Y Nakagawa. 1988. An electrophoretic comparison of enzymes in strains of the Q9-equipped species in the genus Sporobolomyces Kluyver et Van Niel (Sporobolomycetaceae). J. Gen. Appl. Microbiol. 34, 289-295. Yamada, Y, and Y Nakagawa. 1990. The molecular phylogeny of the basidiomycetous yeast species Leucosporidium scottii based on the partial sequences of 18S and 26S ribosomal nucleic acids. J. Gen. Appl. Microbiol. 36, 63-68. Yamada, Y, and T. Nakase. 1985. Waltomyces, a new ascosporogenous yeast genus for the Q^o-equipped, slime-producing organisms whose asexual reproduction is by multilateral budding and whose ascospores have smooth surfaces. J. Gen. Appl. Microbiol. 31, 4 9 1 ^ 9 2 . Yamada, Y, and C. Nogawa. 1990a. The molecular phylogeny of the ascomycetous anamorphic yeast genus Arxula van der Walt, Smith et Yamada based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 36, 4 2 5 ^ 3 4 . Yamada, Y, and C. Nogawa. 1990b. The molecular phylogeny of the lipomycetaceous yeasts based on partial sequences of 18S and 26S ribosomal ribonucleic acids. In: A. Reisinger and A. Bresinsky (Eds.), Abstracts 4th Int. Mycol. Congress, Regensburg, Germany, Aug. 2 8 Sept. 3. University of Regensburg, p. 63. Yamada, Y, and M.Th. Smith. 1985. The coenzyme Q system in strains of species in the genera Stephanoascus and Sporopachydermia (Saccharomycetaceae). Trans. Mycol. Soc. Japan 26, 247-251. Yamada, Y, K. Aida and T. Uemura. 1969. Enzymatic studies on the oxidation of sugar and sugar alcohol. V Ubiquinone of acetic acid bacteria and its relation to classification of genera Gluconobacter and Acetobacter, especially of the so-called intermediate strains. J. Gen. Appl. Microbiol. 15, 181-196. Yamada, Y, T. Okada, O. Ueshima and K. Kondo. 1973a. Coenzyme Q system in the classification of the ascosporogenous yeast genera Hansenula md Pichia. J. Gen. Appl. Microbiol. 19, 189-208. Yamada, Y, M. Arimoto and K. Kondo. 1973b. Coenzyme Q system in the classification of the ascosporogenous yeast genus Schizosaccharomyces and yeast-like genus Endomyces. J. Gen. Appl. Microbiol. 19, 353-358. Yamada, Y, Y Kanematsu, M. Ohashi and K. Kondo. 1973c. On the partly reduced coenzyme Q isolated from Rhodotorula lactosa IFO 1058 and its relation to the taxonomic position. Agric. Biol. Chem. 37, 621-628. Yamada, Y, M. Arimoto and K. Kondo. 1976a. Coenzyme Q system in the classification of apiculate yeasts in the genera Nadsonia,

Saccharomy codes, Hanseniaspora, Kloeckera and Wickerhamia. J. Gen. Appl. Microbiol. 22, 293-299. Yamada, Y, M. Nojiri, M. Matsuyama and K. Kondo. 1976b. Coenzyme Q system in the classification of the ascosporogenous yeast genera Debaryomyces, Saccharomyces, Kluyveromyces, and Endomycopsis. J. Gen. Appl. Microbiol. 22, 325-337. Yamada, Y, M. Arimoto and K. Kondo. 1977. Coenzyme Q system in the classification of some ascosporogenous yeast genera in the families Saccharomycetaceae and Spermophthoraceae. Antonie van Leeuwenhoek 43, 65-71. Yamada, Y, H. Takinami-Nakamura, Y Tahara and M.T. Smith. 1980. The coenzyme Q system in the classification of the ascosporogenous yeast genus Dekkera and the asporogenous yeast genus Brettanomyces. Antonie van Leeuwenhoek 46, 595-599. Yamada, Y, J. Sasaki, C.K Hou, Y Tahara, M. Miranda and H.J. Phafif. 1981. A new natural quinone, ubiquinone-5, isolated from an ascosporogenous yeast species Nematospora coryli. Agric. Biol. Chem. 45, 2671-2673. Yamada, Y, E. Nakazawa and K. Kondo. 1982. The coenzyme Q system in strains of Trichosporon species and related organisms. J. Gen. Appl. Microbiol. 28, 355-358. Yamada, Y, T. Ohishi and K. Kondo. 1983. The coenzyme Q system in strains of some yeasts and yeast-like fiingi. J. Gen. Appl. Microbiol. 29, 51-57. Yamada, Y, M. Watanabe, M. Akita and I. Banno. 1986a. The electrophoretic comparison of enzymes in strains of species in the anamorphic yeast genera Sterigmatomyces and Fellomyces and in the teleomorphic yeast genus Sterigmatosporidium. J. Gen. Appl. Microbiol. 32, 157-163. Yamada, Y, K. Aizawa and I. Banno. 1986b. The coenzyme Q system and an electrophoretic comparison of enzymes in the strain of the anamorphic yeast species, Sterigmatomyces fuzhouensis. J. Gen. Appl. Microbiol. 32, 367-370. Yamada, Y, T. Nakase and J.P. van der Walt. 1986c. The coenzyme Q system in strains of species in the ascosporogenous yeast genera Lipomyces and Waltomyces. Trans. Mycol. Soc. Japan 27, 313-319. Yamada, Y, K. Aizawa, A. Matsumoto, Y Nakagawa and I. Banno. 1987a. An electrophoretic comparison of enzymes in strains of species in the fission yeast genera Schizosaccharomyces, Octosporomyces, and Hasegawaea. J. Gen. Appl. Microbiol. 33, 363-369. Yamada, Y, I. Banno, J.A. von Arx and J.P. van der Walt. 1987b. Taxonomic significance of the coenzyme Q system in yeasts and yeastlike fungi. In: G.S. de Hoog, M.Th. Smith and A.C.M. Weijman (Eds.), The Expanding Realm of Yeast-like Fungi. Elsevier, Amsterdam, pp. 299-308 (Stud. Mycol. 30, 299-308). Yamada, Y, M. Itoh, H. Kawasaki, I. Banno and T. Nakase. 1988a. Kurtzmanomyces gen. nov, an anamorphic yeast genus for the QIQequipped organism whose conidium is freed by an end-break in the sterigma which branches or elongates to produce additional conidia and whose cells contain no xylose. J. Gen. Appl. Microbiol. 34, 5 0 3 506. Yamada, Y, H. Kawasaki, M. Itoh, I. Banno and T Nakase. 1988b. Tsuchiyaea gen. nov, an anamorphic yeast genus for the Q9-equipped organism whose reproduction is either by enteroblastic budding or by the formation of conidia which are disjointed at a septum in the midregion of the sterigmata and whose cells contain xylose. J. Gen. Appl. Microbiol. 34, 507-510. Yamada, Y , Y Nakagawa and J.P. van der Walt. 1988c. Bensingtonia phyllades, a new combination for the Q9-equipped species, Sporobolomyces phyHades. Agric. Biol. Chem. 52, 3203. Yamada, Y, Y Nakagawa and I. Banno. 1989a. The phylogenetic relationship of the Q9-equipped species of the heterobasidiomycetous yeast genera Rhodosporidium and Leucosporidium based on the partial sequences of 18S and 26S ribosomal ribonucleic acids: the proposal of a new genus Kondoa. J. Gen. Appl. Microbiol. 35, 377-385. Yamada, Y, H. Kawasaki, T. Nakase and I. Banno. 1989b. The phylogenetic relationship of the conidium-forming anamorphic yeast genera Sterigmatomyces, Kurtzmanomyces, Tsuchiyaea and

References Fellomyces and the telemorphic yeast genus Sterigmatosporidium on the basis of the partial sequences of 18S and 26S ribosomal ribonucleic acids. Agric. Biol. Chem. 53, 2993-3001. Yamada, Y., K. Sugihara, G.W. van Eijk, H.J. Roeijmans and G.S. de Hoog. 1989c. Coenzyme Q systems in ascomycetous black yeasts. Antonie van Leeuwenhoek 56, 349-356. Yamada, Y, T. Nagahama, H. Kawasaki and I. Banno. 1990a. The phylogenetic relationship of the genera Phaffia Miller, Yoneyama et Soneda and Cryptococcus Kiitzing emend. Phafif et Spencer (Cryptococcaceae) based on the partial sequences of IBS and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 36, 4 0 3 ^ 1 4 . Yamada, Y, Y Nakagawa and I. Banno. 1990b. The molecular phylogeny of the QlO-equipped species of the heterobasidiomycetous yeast genus Rhodosporidium Banno based on the partial sequences of 18S and 26S ribosomal nucleic acids. J. Gen. Appl. Microbiol. 36, 4 3 5 ^ 4 4 . Yamada, Y, T. Nagahama and I. Banno. 1991a. The molecular phylogeny of the Q9-equipped ascomycetous teleomorphic yeast genus Debaryomyces Lodder et Kreger-van Rij based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 37, 277-288. Yamada, Y, K. Maeda, T. Nagahama and I. Banno. 1991b. The phylogenetic relationships of the Q6-equipped genera Torulaspora Lindner and Zygosaccharomyces Barker (Saccharomycetaceae) based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 37, 503-513. Yamada, Y, K. Maeda, T. Nagahama and I. Banno. 1991c. The phylogenetic relationships of the Q9-equipped genus Schwanniomyces Klocker (Saccharomycetaceae) based on the partial sequences of 18S and 26S ribosomal RNAs. J. Gen. Appl. Microbiol. 37, 523-528. Yamada, Y, T. Nagahama, I. Banno, G. Gimenez-Jurado and N. van Uden. 199Id. The phylogenetic relationship of Kurtzmanomyces tardus Gimenez-Jurado et van Uden (Cryptococcaceae) based on the partial sequences of 18S and 26S ribosomal RNAs. J. Gen. Appl. Microbiol. 37, 321-324. Yamada, Y, K. Maeda, T. Nagahama, I. Banno and M.A. Lachance. 1992a. The phylogenetic relationships of the genus Sporopachydermia Rodrigues de Miranda (Saccharomycetaceae) based on the partial sequences of 18S and 26S ribosomal RNAs. J. Gen. Appl. Microbiol. 38, 179-183. Yamada, Y, K. Maeda and I. Banno. 1992b. The phylogenetic relationships of the Q9-equipped, spheroidal ascospore-forming P/C/J/A species based on the partial sequences of 18S and 26S ribosomal RNAs. J. Gen. Appl. Microbiol. 38, 247-252. Yamada, Y, K. Maeda and I. Banno. 1992c, The phylogenetic relationships of the Q6-equipped species in the teleomorphic apiculate yeast genera Hanseniaspora, Nadsonia, and Saccharomycodes based on the partial sequences of 18S and 26S ribosomal ribonucleic acids. J. Gen. Appl. Microbiol. 38, 585-596. Yamada, Y, K. Maeda, I. Banno and J.R van der Wah. 1992d. An emendation of the genus Debaryomyces Lodder et Kreger-van Rij and the proposals of two new combinations, Debaryomyces carsonii and Debaryomyces etchellsii (Saccharomycetaceae). J. Gen. Appl. Microbiol. 38, 623-626. Yamada, Y, K. Maeda and I. Banno. 1992e. An emendation of Kloeckeraspora Niehaus with the type species Kloeckeraspora osmophila Niehaus, and the proposals of two new combinations, Kloeckeraspora occidentalis and Kloeckeraspora vineae (Saccharomycetaceae). Bull. Japan. Fed. Culture Collections 8, 79-85. Yamada, Y, K. Maeda and K. Mikita. 1993. The phylogenetic relationships of species of the apiculate yeast genera Wickerhamia Soneda and Kloeckera Janke based on the partial sequences of 18S and 26S ribosomal RNAs. Bull. Fac. Agric. Shizuoka Univ 43, 19-28. Yamada, Y, K. Maeda and K. Mikata. 1994a. The phylogenetic relationships of Rhodosporidium dacryoideum Fell, Hunter et Tallman based on the partial sequences of 18S and 26S ribosomal RNAs: the proposal of Sakaguchia gen. nov, a heterobasidiomycetous yeast genus. Biosci. Biotech. Biochem. 58, 99-103. Yamada, Y, M. Matsuda, K. Maeda, C. Sakakibara and K. Mikata.

1015

1994b. The phylogenetic relationships of the satum-shaped ascosporeforming species of the genus Williopsis Zender and related genera based on the partial sequences of 18S and 26S ribosomal RNAs (Saccharomycetaceae): the proposal of Komagataea gen. nov. Biosci. Biotechnol. Biochem. 58, 1236-1244. Yamada, Y, K. Maeda and K. Mikata. 1994c. The phylogenetic relationships of the hat-shaped ascospore-forming, nitrate-assimilating Pichia species, formerly classified in the genus Hansenula Sydow et Sydow, based on the partial sequences of 18S and 26S ribosomal RNAs (Saccharomycetaceae): the proposals of three new genera, Ogataea, Kuraishia, and Nakazawaea. Biosci. Biotechnol. Biochem. 58, 1245-1257. Yamada, Y, M. Matsuda, K. Maeda and K. Mikata. 1994d. The phylogenetic relationships of species of the genus Dekkera van der Walt based on the partial sequences of 18S and 26S ribosomal RNAs (Saccharomycetaceae). Biosci. Biotech. Biochem. 58, 1803-1808. Yamada, Y, M. Matsuda, K. Maeda and K. Mikata. 1995a. The phylogenetic relationships of methanol-assimilating yeasts based on the partial sequences of 18S and 26S ribosomal RNAs: the proposal of Komagataella gen. nov. (Saccharomycetaceae). Biosci. Biotechnol. Biochem. 59, 4 3 9 ^ 4 4 . Yamada, Y, T. Suzuki, M. Matsuda and K. Mikata. 1995b. The phylogeny of Yamadazyma ohmeri (Etchells et Bell) Billon-Grand based on partial sequences of 18S and 26S ribosomal RNAs: the proposal of Kodamaea gen. nov. (Saccharomycetaceae). Biosci. Biotechnol. Biochem. 59, \\11-\\1A. Yamaguchi, K. 1943. A new pentose-assimilating yeast. (1) Mycotorula japonica n. sp. J. Agric. Chem. Soc. Japan 19, 800-804. In Japanese. Yamamoto, T., T. Hiratani, H. Hirata, M. Imai and H. Yamaguchi. 1986. Killer toxin from Hansenula mrakii selectively inhibits cell wall synthesis in a sensitive yeast. FEBS Lett. 197, 50-54. Yamamoto, T, K. Uchida and T. Hiratani. 1988. In vitro activity of the killer toxin from yeast Hansenula mrakii against yeasts and molds. J. Antibiotics 41, 3 9 8 ^ 0 3 . Yamane, N., and Y Saitoh. 1985. Isolation and detection of multiple yeasts from a single clinical sample by use of Pagano-Levin agar medium. J. Clin. Microbiol. 21, 276-277. Yamasaki, I., and H. Fujii. 1950. Studies on Sporobolomyces red yeast. Part 7. Classification of the genera Sporobolomyces and Bullera. Bull. Agric. Chem. Soc. Japan 24, 11-15. Yamatoya, K., J. Sugiyama and H. Kuraishi. 1990. Electrophoretic comparison of enzymes as a chemotaxonomic aid among Aspergillus taxa: (2) Aspergillus sect. Flaui. In: R.A. Samson and J.I. Pitt (Eds.), Modern Concepts in Penicillium and Aspergillus Classification. Plenum Press, New York, pp. 3 9 5 ^ 0 5 . Yamazaki, M., and S. Goto. 1985. An electrophoretic comparison of enzymes in the genera Lipomyces and Myxozyma. J. Gen. Appl. Microbiol. 31,313-321. Yamazaki, M., and K. Komagata. 1981. Taxonomic significance of electrophoretic comparison of enzymes in the genera Rhodotorula and Rhodosporidium. Int. J. Syst. Bacteriol. 31, 361-381. Yamazaki, M., and K. Komagata. 1982a. Asporogenous yeasts and their supposed ascosporogenous states: an electrophoretic comparison of enzymes. J. Gen. Appl. Microbiol. 28, 119-138. Yamazaki, M., and K. Komagata. 1982b. An electrophoretic comparison of enzymes in the genus Cryptococcus and related microorganisms. J. Gen. Appl. Microbiol. 28, 429-449. Yamazaki, M., and K. Komagata. 1983a. An electrophoretic comparison of enzymes of ballistosporogenous yeasts. J. Gen. Appl. Microbiol. 29, 115-143. Yamazaki, M., and K. Komagata. 1983b. An electrophoretic comparison of the enzymes of Hansenula yeasts. J. Gen. Appl. Microbiol. 29, 365-378. Yamazaki, M., S. Goto and K. Komagata. 1982. Comparison of enzymes from strains of wine yeast and their related yeasts on electrophoresis. J. Inst. Vitic. Yamanashi Univ. 17, 11-19. In Japanese. Yamazaki, M., S. Goto and K, Komagata. 1983. An electrophoretic

1016

References

comparison of the enzymes of Saccharomyces yeasts. J. Gen. Appl. Microbiol. 29, 305-318. Yamazaki, M., S. Goto and K. Komagata. 1985. Taxonomical studies of the genus Tilletiopsis on physiological properties and electrophoretic comparison of enzymes. Trans. Mycol. Soc. Japan 26, 13-22. Yan, Z.H., S.O. Rogers and C.J.K. Wang. 1995. Assessment of Phialophora species based on ribosomal DNA internal transcribed spacers and morphology. Mycologia 87, 72-83. Yarrow, D. 1965. Pichia onychis sp. n. Antonie van Leeuwenhoek 31, 465^67. Yarrow, D. 1968. Torulopsis peltata sp. n. Antonie van Leeuwenhoek 34, 81-84. Yarrow, D. 1969a. Candida steatolytica sp. n. Antonie van Leeuwenhoek 35, 24-28. Yarrow, D. 1969b. Selenotila peltata comb. n. Antonie van Leeuwenhoek 35, 418-420. Yarrow, D. 1972. Four new combinations in yeasts. Antonie van Leeuwenhoek 38, 357-360. Yarrow, D. 1978. Candida milleri spec. nov. Int. J. Syst. Bacteriol. 28, 608-610. Yarrow, D. 1984a. Saccharomyces Meyen ex Reess. In: N.J.W. Kregervan Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 379-395. Yarrow, D. 1984b. Schizosaccharomyces Lindner. In: N.J.W. Kregervan Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 4 1 4 ^ 2 2 . Yarrow, D. 1984c. Torulaspora Lindner. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 4 3 4 ^ 3 9 . Yarrow, D. 1984d. Zygosaccharomyces Barker. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 449-465. Yarrow, D., and D.G. Ahearn. 1971. Brettanomyces abstinens sp. n. Antonie van Leeuwenhoek 37, 296-298. Yarrow, D., and D.G. Ahearn. 1984. Malassezia Baillon. In: N.J.W. Kreger-van Rij (Ed.), The Yeasts, A Taxonomic Study, 3rd edn. Elsevier, Amsterdam, pp. 882-885. Yarrow, D., and J.W. Fell. 1980. Validation of the name of the yeast Sporobolomyces holsaticus Windisch. Mycotaxon 12, 253-254. Yarrow, D., and S.A. Meyer. 1978. Proposal for amendment of the diagnosis of the genus Candida Berkhout nom. cons. Int. J. Syst. Bacteriol. 28, 611-615. Yarrow, D., and T. Nakase. 1975. DNA base composition of species of the genus Saccharomyces. Antonie van Leeuwenhoek 41, 81-88. Yokomori, Y, H. Akiyama and K. Shimizu. 1988. Toxins of a wild Candida killer yeast with a novel killer property. Agric. Biol. Chem. 52, 2797-2801. Yokote, Y, M. Sugimoto and S. Abe. 1974. Yeasts utilizing methanol as a sole carbon source. J. Ferment. Technol. 52, 201-209. Yokotsuka, I., and S. Goto. 1955. Studies on Japanese wine film yeasts. Part 4. On new species of genus Candida and Trichosporon. J. Agric. Chem. Soc. Japan 29, 132-135. Yonezawa, W, F. Aoki, M. Ota, K. Nishi and K. Matsumoto. 1957. Trichosporon aneurolyticum, a new thiamine-destroying fungus. J. Vitaminol. 3, 3 9 ^ 2 . Yoo, B.Y, G.B. Calleja and B.F. Johnson. 1973. Ultrastructural changes of the fission yeast {Schizosaccharomyces pombe) during ascospore formation. Arch. Mikrobiol. 91, 1-10. Yoo, B.Y, B.F Johnson and G.B. Calleja. 1990. Ultrastructure of the ascospore walls of Schizosaccharomyces pombe during germination. Mycologia 82, 4 3 ^ 7 . Young, T W 1987. Killer yeasts. In: A.H. Rose and J.S. Harrison (Eds.), The Yeasts, Vol. 2, Yeasts and the Environment. Academic Press, London, pp. 131-164. Young, T.W, and M. Yagiu. 1978. A comparison of the killer character in different yeasts and its classification. Antonie van Leeuwenhoek 44, 59-77.

Yue, J.-Z. 1977. Saccharomycodes sinensis sp. nov. A new species of yeast from soil of Hainan Island, China. Acta Microbiol. Sinica 17, 89-95. In Chinese. Yue, J.-Z. 1982. A new species of Sterigmatomyces. Acta Mycol. Sin. 1, 79-87. Yue, J.-Z., and Y. Pna. 1984. A new species of Candida - Candida beijingensis. Acta Mycol. Sin. 3, 157-168. In Chinese. Yukawa, M., and T. Maki. 1931, Schizosaccharomyces japonicus nov. spec. La. Bui. Sci. Fakultato Terkultura, Kjusu Imp. Univ., Fukuoka, Japan 4, 218-226. In Japanese; English summary. (Cited by Wickerham and Duprat 1945.) Zambino, P.J., and T.C. Harrington. 1992. Correspondence of isozyme characterization with morphology in the sexual genus Leptographium and taxonomic implications. Mycologia 84, 12-25. Zamir, D., and I. Chet. 1985. Application of enzyme electrophoresis for the identification of isolates in Trichoderma harzianum. Can. J. Microbiol. 31, 578-580. Zekhnov, A.M., Y.O. Soom and G.F. Nesterova. 1989. New test strains for detecting the antagonistic activity of yeasts. Mikrobiologiya 58, 807-811. In Russian. Zender, J. 1925a. Sur quelques nouvelles especes de levures et d'Endomyces. Bull. Soc. Bot. Geneve 17, 258-271. Zender, J. 1925b. Sur la classification des Endomycetacees. Bull. Soc. Bot. Geneve 17, 272-302. Zhu, H., and H. Bussey. 1989. The Kl toxin of Saccharomyces cereuisiae kills spheroplasts of many yeast species. Appl. Environm. Microbiol. 55, 2105-2107. Zhu, H., H. Bussey, D.Y Thomas, J. Gagnon and A.W Bell. 1987. Determination of the carboxyl termini of the a and (3 subunits of yeast Kl killer toxin. J. Biol. Chem. 282, 10728-10732. Zickler, D., and L.W Olson. 1975. The synatonemal complex and the spindle plaque during meiosis in yeast. Chromosoma 50, 1-23. Zierdt, C.H., C. Detlefson, J. Muller and K.S. Waggie. 1988. Cyniclomyces guttulatus (Saccharomycopsis guttulata) - culture, ultrastructure and physiology. Antonie van Leeuwenhoek 54, 357366. Zikes, H. 1911. Zur Nomenclaturfrage der Apiculatushefe. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 30, 145-149. Zimmermann, J. 1938. Sprosspilze im Wein und deren Bestimmung. Zentralbl. Bakteriol. Parasitenkd., Abt. II, 98, 36-65. Zopf, W. 1889. Oxalsauregahrung (an Stelle von Alcoholgahrung) bei einem typischen (endosporen) Saccharomyceten (S. hansenii n. spec). Ber. Dtsch. Bot. Ges. 7, 94-97. Zopf, W 1890. Die Pilze in morphologischer, physiologischer, biologischer und systematischer Richtung. Trewendt, Breslau. Zorg, J., S. Kilian and F Radler. 1988. Killer toxin producing strains of the yeasts Hanseniaspora uuarum and Pichia kluyveri. Arch. Microbiol. 149, 261-267. Zsolt, J. 1957. A new yeast: Dioszegia hungarica nov. gen. et sp. Bot. Kozl. 47, 63-66. Zsolt, J. 1958. Torulopsis pseudaeria nov. spec, a new yeast from soil. Antonie van Leeuwenhoek 24, 210-214. Zsolt, J. 1963. Morphological and physiological investigations of a Dipodascus strain isolated in Hungary. Acta Bot. Hung. 9, 217-226. Zsolt, J., and E.K. Novak. 1968. A new species of 'yeast-like' achloric algae. Prototheca ubrizsyi n. sp. Acta Phytopathol. Acad. Sci. Hung. 3, 423-430. Zuger, A., E. Louie, R.S. Holzman, M.S. Simberkofif and J.J. Rahal. 1986. Cryptococcal disease in patients with the acquired immunodeficiency syndrome. Ann. Int. Med. 104, 234-240. Zugmaier, W, R. Bauer and F Oberwinkler. 1994. Mycoparasitism of some Tremella species. Mycologia 86, 49-56. Zundel, G.L. 1953. The Ustilaginales of the World. Contribution No. 176, Dept. Bot., The Pennsylvania State College, University Park, PA. Zwillenberg, L.O. 1966. Torulopsis anatomiae, a new yeast resistant against low concentrations of formalin. Antonie van Leeuwenhoek 32, 135-138.

Index of taxa by genus and species The names of genera, species and varieties accepted by the authors are indicated in bold type. The numbers of the pages referring to diagnoses and standard descriptions are printed in bold type as well. Aciculoconidium 118, 439, 573 - aculeatum 439 Acrosporium candidum 210 Actonia tropicalis All Aessosporon - dendrophilum 733 - salmonicolor 697 Agaricostilbum 627, 639 - hyphaenes 639 - palmicolum 639 - pulcherrimum 639 Ambrosiozyma 113, 129, 384 - ambrosiae 129 - cicatricosa 130 - monospora 131, 384 - philentoma 131 - platypodis 132, 384 Amphierna rubra 836 Anthomyces reukaufii 260 Apiotrichum - curuatum 752 - eucryphiae 673 - futronensis 813 - humicola 757 - nothofagi 823 - osvaldi 544 Arthroascus 384 - fermentans 311 - javanensis 379 - schoenii 380 Arxiozyma 113, 134 - telluris 134 Arxula 118, 441, 448, 573, 604 - adeninivorans 441 - terrestris 442 Ascocybe grouesii 144 Ascoidea 111, 113, 136,200 - africana 137 - asiatica 140 - corymbosa 137 - hylecoeti 138 - rubescens 139, 140 - saprolegnioides 140 Ascotrichosporon - capitatum 186 - sericeum 191 Ashbia gossypii 204 ^5/?^ja 207 - gossypii 204, 207 Asporomyces uuae 264 v4 telosaccharomyces - breweri 656 - busse-buschki 656 - guttulatus 154

- hominis 656 - hudeloi 161 - laryngitidis All - paratropicalis 563 - pseudotropicalis 237 - tropicalis 563 Aureobasidium 123 - pullulans 124, 916 Aureohyphozyma 123 Aureomyces mirabilis 144 Auriculoscypha anacardiicola 618 Azymocandida - aaseri 476 - curvata 752 - muscorum 822 - mycoderma 569 - rugosa 546 - scottii 673 - zeylanoides 571 Azymohansenula canadensis 295 yizymomjKce^ uanriji 170 Azymoprocandida - humicola 757 - japonica 664 - lipolytica 420 - mesenterica 525 - tropicalis 563 ^a^yma 113, 141,253 - anomala 141, 253 Ballistosporomyces - ruber 837 - xanthus 841 Basidiotrichosporon - cutaneum 860 - pullulans 869 Bensingtonia 629, 723 - ci/ia^fl 724 - ingoldii 124 - intermedia 725 - miscanthi 126 - naganoensis 726 - phyllada 727 - phylladus 111 - subrosea 728 - yamatoana 729 - yuccicola 729 Blastobotrys 118, 443, 573, 604 - arbuscula 444 - aristata 444 - capitulata 445 - elegans 446 - farinosus 401 - ^igas 401, 446 1017

- nauarrensis 447 - wiWfl 446 - proliferans 447 Blastodendrion - aerius 814 - arz^/ 308 - braulti 223 - brumptii 494 - ca«w 572 - carbonei 821 - cutaneum 477 - erectum All - faurei All - flareri 162 - gifuense All - globosum 536 - gracile 536 - guilliermondii 308 - intermedium 516 - intestinale All - intestinale var. epidermicum 536 - irritans 563 - kayongosi 563 - krausi 308 - macedoniensis 237 - macroglossiae 572 - oosporoides All - pinoyi A16 - pinoysimilis All - procerum 237 - simplex 821 Blastoderma salmonicolor 697 Blastomyces lithogenes 656 Blastoschizomyces - capitatus 186 - pseudotrichosporon 186 Botryoascus 384 - cladosporoides 311 - synnaedendrus 382 Botryomyces 123 Botryozyma 118, 449, 573 - nematodophila 449 Botrytis geotricha 210 Brettanomyces 114, 118, 177, 450, 573 - abstinens 175 - anomalus \1A, 111, 451, 877 - bruxellensis 175, 451 - bruxellensis var. /e«?w5 175 - bruxellensis var. nonmembranaefaciens 175 - bruxellensis var. t;z«i 175 - cz^n 174 - claussenii 11A - claussenii var. sablieri 174

1018 Brettanomyces (contd) - custersianus \11, 451 - custersii 175, 177 - dublinensis 174 - intermedia 175 - intermedius 175 - italicus 559 - lambicus 175 - naardenensis 177, 451 - nanus 452 - patavinus 175 - petrophilum 537 - schanderlii 175 - sphaericus 502 - uersatilis 567 - vini 175 5M//^m 630, 731 - alba 641, 732 - alba var. /ac^w 739 - armeniaca 732 - aurantiaca 733 - crocea 733 - dendrophila 733 - derxii 739 - globispora 734 - grandispora 11>1 - intermedia 125 - megalospora 735 - miyagiana 736 - oryzae 736 - pseudoalba 738 - punicea 739 - pyricola 12)1 - salicina 838 - sinensis 739 - singularis 839 - tsugae 841 - variabilis 740 Bulleromyces 627, 641 - a/6M5 641, 711 Burenia 357

Calyptrozyma 123 C««^iV/fl 118,454 - aaseri 476 - acidothermophilum 223 - acutus 805 - agrestis 390 - fl/^ic««5 152, 255, 476 - albicans var. metalondinensis 411 - albicans var. stellatoidea All - albomarginata 525 - alcomigas 488 - a/Jo/ 477 - amapae 479 - amideuorans 308 - amylolenta 749 - anatomiae 479 - ancudensis 480 - anomala 162 - antarctica 791 - antillancae 481 - apicola 481 - tt/jw 482 - aquatica 750

Index of taxa by genus and species armeniaca-cornusmas 293 atlantica 483 atmosphaerica 483 auriculariae 807 auringiensis 484 australis 547 austromarina 484 azynta 485 bacarum 808 balzeri SI 2 beechii 485 beijingensis 174 benhamii 564 bertae 486 bertae var. chiloensis 486 berthetii 487 bethaliensis All beuerwijkii 287 biliaria All bimundalis var. americana 283 bimundalis var. bimundalis 291 bimundalis var. chlamydospora 564 6/fl/i^ii 487 bogoriensis 808 bogoriensis var. lipolytica 808 boidinii 488 boleticola 489 AoifiAi 489 bombicola 490 bondarzewiae 481 bonordenii 563 Z^owwa 134, 135 brasiliensis 872 brassicae 223 bronchialis 563 brumptii 494 Z)i#?«// 809 buinensis 491 butantanensis All butyri 491 cacaoi 304 cantarellii 492 capsuligena 664 cariosilignicola 321 caseinolytica 492 castellanii 223 castellii 493 castrensis 493 catenulata 494 cellulolytica 573 chevalieri 223 chilensis 495 chiropterorum 495 c/zoJa// 293 ciferrii 400 c//rea 326 citrica 564 claussenii All cloacae 522 coipomoensis 496 colliculosa 404 conglobata 496 curiosa 676 curvata 752 cylindracea 497
-

deformans 420 dendrica 497 dendritica 223 dendronema 498 deserticola 300 desidiosa All diddensiae 498 diffluens 810 diversa 499 domercqiae 411 drimydis 500 dubliniensis 479, 573 dulciaminis 805

-

^
-

enterica 563 entomaea 322 entomophila 500 eremophila 316 ergastensis 501 ernobii 501 etchellsii 502 ethanolica 503 ethanothermophilum 223 euphorbiae 301 euphorbiaphila 302 euphorbiiphila 302 fabianii 303 famata 161,503 famata \Sir. famata 161, 503 famata \Sir.flareri 162, 503 favrei All fennica 503 fermenticarens 504 ^Z)rae 293 fimetaria 305 fimetaria var. diversa 499 flareri 162 floricola 505 fluviatilis 505 foliarum 811 fragariorum 811 /rag/ 573 freyschussii 506 friedrichii 506 frigida 676 fructus 507 fujisanensis 812 fukuyamaensis 573 fusiformata 793 galacta 507 ge//6f« 676 genitalis All geochares 508 glabrata 152, 508 glaebosa 509 globosa 146 glucosophila 510 graminis 816 gropengiesseri 510 guilliermondii 152, 308, 511 guilliermondii var. carpophila 308 guilliermondii var. guilliermondii 511 guilliermondii var. japonica 308 guilliermondii var. membranaefaciens 329 guilliermondii var. membranifaciens 511 guilliermondii var. nitratophila 314

402, 500

Index of taxa by genus and species -

guilliermondii var. soya 308 haemulonii 511 halonitratophila 502 halophila 567 hellenica All heueanensis 756 heueanensis var. curuata 752 hinoensis 113 holmii 364 homilentoma 512 huempii 757 humicola 757 humilis 513 hydrocarbofumarica 487 hylophila 817 iberica 572 incommunis 513 inconspicua 514 - ingeniosa 817 - ingens 188 - inositophila 411 insectalens 514 insectamans 515 insectorum 515 - insolita 563 intermedia 147, 516 - intermedia var. ethanophila 516 - intestinalis 477 ishiwadae 516 - japonica 664 - jauanica 287, 818 karawaiewii 517 - ^e/5;r 236, 237 - kestonii 308 - kochii 697 - koshuensis 488 A^msii 517 kruisii 518 )trMs^i 152, 222, 519 - krusei var. saccharicola 549 - krusei var. transitoria 305 - krusei var. uanlaeriana 319 lactis-condensi 519 - lactosa 111 - lambica 305 - langeroni 477 laureliae 519 - lignophila 818 lipolytica 420, 421, 520 - lipolytica var. deformans 420 - lipolytica var. thermotolerans 420 llanquihuensis 520 - /oZ^a^a 223 - lodderae 570 lusitaniae 148, 151, 521 - lynferdii 317 lyxosophila 521 - macedoniensis 131 magnoliae 521 - majoricensis 525 maltosa 522 - mamillae 308 - mannitofaciens 567 - marina 161 maris 523 maritima 523

- melibiosi 308 - melibiosi var. membranifaciens melibiosica 524 - melibiosophila 594 - melinii 295 - melinii var. melobiosica 223 membranifaciens 525 mesenterica 525 - metalondinensis 477 - methanolica 488 - methanolophaga 559 - methanolouescens 324 methanosorbosa 526 - methylica 488 - meyerae 323 milleri 526 /iK?gi7 527 molischiana 296 monosa 305 montana 527 - mortifera 237 - mortifera var. a 237 mucifera 400 - mucilagina 595 multigemmis 528 musae 528 - muscorum %11 mycoderma 569 mycoderma var. annulata mycotoruloidea 477 naeodendra 529 naganishii 164

525

328

- nagoyaensis 526 nanaspora 530 natalensis 530 - nauarrensis 524 nemodendra 531 nitratiuorans 344 nitratophila 531 nivalis 676 - «it;efl 563 nodaensis 502 norvegensis 328 norvegica 532 nouvelii 477 nouellus 522 oZ)^w5<3 148, 151 obtusa var. arabinosa 151, 325 obtusa var. oregonensis 534 odintsovae 532 o/ec! 420 oleophila 152, 420, 533 olivarium 488 ooitensis 488 oregonensis 534 osornensis 537 oi;a/is 535 palmioleophila 535 paludigena 536 • pampelonensis 524 parakrusei 223 paralipolytica 420 paranensis 308 parapsilosis 255, 536 parapsilosis var. hokkai 524 parapsilosis var. intermedia 537

1019 - parapsilosis var. obtusa 148 parapsilosis var. querci 543 - parapsilosis var. tokyoensis 308 - parapsilosis var. tuxtlensis 308 pararugosa 399, 538 paratropicalis 563 - pelliculosa 1%1 - pelliculosa var. cylindrica 1%1 peltata 538 - periphelosum 162 petrohuensis 539 - petrophilum 420 - philyla 823 pignaliae 539 - pilmaiquensis 523 /7i«/ 540 pinoyi 476 - pinoysimilis 477 - pintolopesii 134 - pintolopesii var. slooffiae 134 - placentae 431 - podzolica 762 - polymorpha 348 populi 541 - pseudoglaebosa 573 pseudointermedia 541 pseudolambica 542 pseudolipolytica 420 - pseudotropicalis 237 - pseudotropicalis var. lactosa 237 psilosis 476 psychrophila 542 pulcherrima 264, 543 pulmonalis 476 - punicea 739 - pustula 825 quercitrusa 543 quercus 543 quercuum 543 queretana 488 railenensis 544 ralunensis 489 rancensis 265 rauautii 494 - requinyii 223 reukaufii 265, 545 rhagii 545 rhodohalophila 567 - rignihuensis 573 robusta 361, 362 rotundata ^11 rugopelliculosa 545 rugosa 546, 872 rugosa var. elegans 546 saitoana 546 5«^^ 547 salmanticensis 548 - salmonicola 547 santamariae 549 santamariae var. membranifaciens 573 santjacobensis 550 savonica 550 schatavii 551 scottii 673 sequanensis 551

550,

1020

Index of taxa by genus and species

Candida (contd) - shehatae 212, 552 - shehatae var. insectosa 552 - shehatae var. lignosa 552 - shehatae var. shehatae 552 - silvae 553 - silvanorum 554 - silvatica 554 - silvicola 312 - silvicola var. melibiosica 488 - silvicultrix 555 - ^ / o ( # / 134, 135 - s'o/'^e

-

- 5005/Z

-

573

solani 555 soli 221 solicola 223 sonckii 826 sonorensis 556 223

sophiae-reginae 556 sorbophila 399, 557 sorbosa 221 sorboxylosa 558 spandovensis 558 spherica 233, 234 steatolytica 422 s^^//ara 559 stellatoidea All stellimalicola 573 suaueolens 757, 787 subtropicalis 522 succiphila 559 suecica 560 tamarindi 223 tannotolerans 243 tanzawaensis 561 tenuis 561 ^^/>a^ 562 terebra 322 torresii 562 triadis All trigonopsoides 328 tropicalis 255, 563 tropicalis var, lambica 547 tropicalis var. rhagii 545 truncata All tsuchiyae 564 tsukubaensis 795 MnVis 314, 565 vaccina 565 valdiviana 566 yfl/iWa 319,566 vanderwaltii 566 uanriji 547 variabilis 293 vartiovaarae 567 veronae 322 versatilis 172, 567 vinaria 568 w/ii 569 viswanathii 255, 570 vulgaris 563 wickerhamii 570 xestobii 571 zeylanoides 571 zeylanoides var. norvegensis

328

Castellania - accraensis 564 - aegyptiaca 564 - africana 223 - fl/Z)a 476 - balcanica 223 - bronchialis 563 - burgessi 563 - castellanii 264 - copellii All - decolorans A16 - enterica 563 - epidermica 536 - faecalis 563 - guilliermondii 308 - insolita 563 - kartulisi 237 - linguae-pilosae 563 - macedoniensis 237 - macedoniensoides 237 - mannitofermentans All - metalondinensis All - metatropicalis 563 - metchnikoffi 476 - muhira 308 - nabarroi All - negrii 308 - n/t;efl 563 - parakrusei 223 - paratropicalis 563 - pseudoguilliermondii 308 - pseudolondinensis All - pseudolondinoides All - pseudometalondinensis All - pseudotropicalis 237 - pulmonalis A16 - richmondi All - tropicalis 563 Cephaloascus 111, 114, 143, 200 - albidus 143 - fragrans 144 Ceratocystis 111 Chionosphaera 627, 643 - apobasidialis 644 Chlamydatomus beigelii 869 C/i lamydozyma - pulcherrima 264 - reukaufii 265 - zygota 265 Chromotorula - aurantiaca 807 - «wre<3 759 - ^ a i ; a 754 - luteola 760 Cintractia 614 Citeromyces 114, 146 - matritensis 146, 147 Cladosporium - chodati 293 - fermentans 293 - suaveolens 1^1 Clavispora 114, 148, 399 - lusitaniae 148 - opuntiae 150 Coccidiascus 114, 153 - /£;^m 153

Coccidioides brasiliensis 872 Colacogloea pen iophorae 618 Coniodyctum 615 Crebrothecium 207 - ashbyi 201 Cryptococcus 398, 572, 630, 742 - flm«5 747 - aggregatus 538 - albidosimilis lAl - albidus 748 - albidus var. aerius lAl - albidus var. diffluens 748 - albidus var. oi;a//5' 748 - amylolentus 749 - antarcticus 749 - aquaticus 750 - asgardensis 765 - fl/er 750 - bacillaris 559 - bacillisporus 657 - baldrensis 765 - bhutanensis 751 - breweri 656 - bronchialis 814 - californicus 319 - candidum 546 - candidus 161 - castellanii 264 - cereanus 395 - cerebriloculosis 656 - colliculosus 404 - conglobatus 496 - consortionis 751 - copellii All - corallinus 821 - costantini 656 - curiosus 676 - curvatus 152 - dattilus 240 - J # i / e « 5 748 - diffluens var. urugaiensis 748 - dimennae 753 - elinovii 16A - favrei All - feraegula 753 - flavescens 759 - /at;Ms 754 - friedmannii 754 - fuscescens 754 - gastricus 755 - genitalis 748 - gilvescens 756 - glabratus 508 - glutinis 814 - gropengiesseri 510 - guttulatus 154 - harteri A16

- hempfflngii 765 -

heveanensis 756 himalayensis 16A hinnuleus 816 holmii 364 hominis 656 hominis var. hondurianus hondurianus 656 huempii 151

656

Index oftaxa by genus and species humicolus 151 hungaricus 758 hungaricus van gallicus 761 infirmo-miniatus 650 interdigitalis 264 intermedins 516 kartulisi 237 kayongosi 563 kejyr 237 kleini 656 kuetzingii 759 lactatiuorus 396 laryngitidis All laurentii 759 - laurentii yar. flauescens 759 - laurentii var. magnus 756, 761 - laurentii var. magnus f. ater 750 - linguae-pilosae 563 - lipoferus 251 - lithogenes 656 - ludwigi 821 - /w/?z 765 luteolus 760 macerans 760 - macroglossiae 571 magnus 761 - magnus var. heveanensis 756 - malassezii 782 - marinus 762 - mattleti 564 - melibiosum 594 - men« 821 - meningitidis 656 - minor 162 - molischianus 296 - mucorugosus 748 - nasalis 656 neoformans 656, 762 - neoformans var. ga^^n 657 - neoformans var. innocuous 748 - neoformans var. uniguttulatus 661 - pararoseus 821 - phylloplanus 824 - pinoysimilis 411 - plimmeri 656 podzolicus 762 - psicrophilicus 656 - pulverulentus 836 radiatus 821 rhodozyma 718 ruber 820 rubrorugosus 821 sanniei 821 simplex 821 skinneri 763 socialis 765 sphaericus 234 • stellatus 559 - sulphureus 237 terreus 764 - terricolus 748 - tonsillarum All tsukubaensis 795 tyrolensis 765 uniguttulatus 667, 765 • M^i7i5 314 -

- wt;ae 572 - vishniacii 765 - vishniacii var. asocialis 765 - vishniacii var. vladimirii 765 - vishniacii var, wo/^/ 765 - wrightensis 765 - yarrowii 765 Cylindrium - fragrans 577 - suaveolens 757 Cyniclomyces 114, 154 - guttulatus 154 Cystofilobasidium 627, 646 - bisporidii 646 - capitatum 648 - infirmominiatum 650 - lari-marini 652 Cytobasidium lasioboli 618

Debaryomyces 114, 157, 226, 350, 351, 407 - artagaveytiae 172 - cantarellii 166 - carsonii 158 - castellii 159 - cavensis 164 - coudertii 160 - dekkeri 405 - delbrueckii 404 - disporus 388 - emphysematosus 161 - etchellsii 160 - fabryi 162 - fabryi var. tremoniensis 161 - fluxorum 306 - fluxuum 306 - formicarius 170 - franciscae 406 - fukuyamaensis 162 - globosus 406 - gruetzii 161 - guilliermondii 161 - guilliermondii var. nova-zeelandicus 161 - halotolerans 304 - hansenii 161 - hansenii var. fabryi 162 - hansenii var. hansenii 161 - hildegaardi 161 - hominis 656 - hudeloi 161 - japonicus 164 - kloeckeri 161 - kloeckeri var. hudeloi 161 - kloeckeri var. major 161 - konokotinae 170 - laedegaardi 161 - leopoldi 161 - lundsgaardi 161 - mandshuricus All - maramus 163 - marylandii 162 - matruchoti 161 - matruchoti var. cesarii 161 - matruchoti var. subglobosus 162 - melissophilus 164 - membranaefaciens 161

1021 -

membranaefaciens var. hollandicus 161 m/5'o 162 neoformans 656 nepalensis 164 nicotianae 162 nicotianae var, minor 162 nilssoni 405 occidentalis 165 occidentalis var. occidentalis 165 occidentalis var. persoonii 165 orientalis 162

- phaffii 166 - polymorphus 166 - pseudopolymorphus 167 - robertsiae 168 - ra^e/ 404 - 5aA:e 162 - subglobosus 162 - tamarii 172, 567 - toletanus 346 - tremoniensis 161 - tyrocola 161 - tyrocola var. hansenii 161 - udenii 169 - vanrijiae 170 - vanrijiae var. vanrijiae 170 - vanrijiae var. yarrowii 170 - w«i 158 - yamadae 111 - yarrowii 170 Debaryozyma 172 - castellii 159 - coudertii 160 - hansenii 161 - melissophila 164 - polymorpha 166 - pseudopolymorpha 167 - tamarii 567 - vanriji 170 - yamadae 171 Dekkera 114, 118, 174,453 - abstinens 175, 177 - anomala 174 - bruxellensis 175 - claussenii \1A, 111 - custersiana 451 - custersianus 111, 453 - intermedia 175, 177 - lambica 175, 177 - naardenensis 111, 451, 453 Dekkeromyces - delphensis 232 - dobzhanskii 233 - drosophilarum 234 - fragilis 236, 237 - krassilnikovii 234 - /ac/w 233 - lodderi 235 - macedoniensis 237 - marxianus 236 - phaseolosporus 234 - wickerhamii 242 Dematium chodati 293 Dermatium albicans 476 Dicellomyces gloeosporus 615 Dioszegia hungarica 758

1022

Index of taxa by genus and species

Dipodascopsis 114, 178, 436 - tothii 178 - uninucleata 179 - uninucleata var. uninucleata 179 - uninucleata var. wickerhamii 179 Dipodascus 111, 115, 119, 181, 200, 213, 384 - aggregatus 182 - albidus 183 - albidus var. minor 182 - ambrosiae 184 - armillariae 184 - australiensis 185 - capitatus 186 - geniculatus 187 - geotrichum 210 - i7i^^/i5 188, 602 - macrosporus 189 - magnusii 189 - ovetensis 190 - polyporicola 195 - reessii 212 - spicifer 191 - tetrasperma 192 - to^/?n 178 - uninucleatus 179 Eeniella nana \11, 452 Enantiothamnus braulti 223 Endoblastoderma pulverulentum Endoblastomyces thermophilus Endomyces 115,194,384 -

actoni All albicans 416 anomalus 287 belgica 319 bispora 131 bisporus 131, 291 bronchialis 563 burgessi 563 capsularis 375 c/zo^fl// 319 cortinarii 194 crwz/ 563 decipiens 194, 384 entericus 563 faecalis 476 fibuliger 111 geotrichum 210 guilliermondii 308 hordei 311 insolitus 563 Jauanensis 379, 384 krusei Til /ac//5 211 lactis var. fragrans 577 /ac?/5 var. klebahnii 578 /ac/w var. matalensis 210 laibachii 865 lindneri 311 magnusii 189 margaritae 1%1 molardi 411 negrii 308 niveus 563 Odessa 1%1

287 223

- ovetensis 190 - parasiticus 196 - paratropicalis 563 - pinoyi 476 - polyporicola 195 - pseudotropicalis 237 - pulmonalis 476 - reessii 111 - rotundus %11 - rugosus ^11 - schneggii ISl - schoenii 380 - scopularum 195, 384 - tetrasperma 192 - tropicalis 477, 563 - trumpyi 319 - valbyensis 218 - vuillemini 476 - zambettakesii 861 Endomycopsella 384 - crataegensis 376 - t;m/ 383 Endomycopsis 384 - albicans 476 - balearica 338 - bispora 291 - bubodii 377 - burtonii 293 - capsularis 375 - c/zoJa^/ 293 - ciferrii 299 - fasciculata 131

- fibuliger 377 - fibuliger var. hordei 377 - fibuliger var. lindneri 377 - fibuligera var. energica 338 - fibuligera var. monospora 131 - fukushimae 413 - guilliermondii 308 - jauanensis 379, 384 - lipolytica 420, 421 - m«// var. faecalis 862 - monospora 131, 133 - monteuidensis 867 - muscicola 340 - ohmeri 329 - ohmeri var, minor 329 - ovetensis 190 - platypodis 132, 133 - scolyti 339 - selenospora 381 - subpelliculosa 344 - t;m/ 383 - wickerhamii 349 - wingei 295 Endyllium magnusii 189 Entelexis magnoliae 521 Eremascus 111 Eremothecium 115,201 - ashbyi 201 - corv/i 202 - cymbalariae 204 - gossypii 204 - sinecaudum 205 Erythrobasidium 611, 654 - hasegawae 654

- hasegawianum 654 Eutorula - colliculosa 404 - pulcherrima 264 Eutorulopsis - dubia 821 - 5aA:e 547 - subglobosa 162 - uniguttulata 667 Exobasidiellum gramineum Exophiala 123

615

- fragilis 236 - macedoniensis 237 - marxiana 236 - ;7/iq^/ 239 Fellomyces 630, 768, 879 - fuzhouensis 769 - horovitziae 769 - nectairei 780 - penicillatus 170 - polyborus 111 Fermentotrichon - behrendii 293 - fermentans 576 - lodderae 570 Fibulobasidium 627 - inconspicuum 710 Filobasidiella 628, 656 - arachnophila 662 - bacillispora 657 - depauperata 662 - neoformans 656 - neoformans var. bacillispora - neoformans var. neoformans Filobasidium 628, 663 - capsuligenum 664 - elegans 665 - floriforme 666 - globisporum 667 - uniguttulatum 667 Fissuricella filamenta 858

657 656

Galactomyces 115, 119, 193, 209 - citri-aurantii 209 - geotrichum 210 - reessii 212 Gelitanipulnivella 123 Geotrichoides - asteroides 858 - ^a/zer/ 872 - cutaneus 860 - y^e^r 237 - krusei 223 - paludosus 860 - vulgaris 563 Geotrichum 111, 115, 119, 442, 573, 574 - amycelicum 869 - armillariae 184 - asteroides 210, 858 ~ brasiliense %11 - candidum 210, 575 - candidum var. citri-aurantii 209 - capitatum 186, 575 - citri-aurantii 209, 575

/«Jex o /toJCfl/jy ge«w5 fl«<:/ species - clavatum 575 - cutaneum 860 - decipiens 184, 576 - dulcitum 861 - famatum 161 - fermentans 576 -fici 577 - fragrans 511 - gmcile 862 - hirtum 872 - infestans 857 - i/ig^«s 188, 578 - javanense 211 - klebahnii 578 - /mAz7 186 - louhieri 866 -

/M^WI^IV

189,

190,

579

- magnum 577 - matalense 210 - matalense var. chapmanii - novakii 211 - penicillatum 578 - pseudocandidum 211 - pulmonale 821 - pulmoneum 872 - rectangulatum 577 - redaellii 211 - robustum 867 - rotundatum 872 - rotundatum var. gallicum - rugosum 872 - sericeum 190, 191, 579 - suaveolens ISl - terrestre 442 - vanrijiae 862 - versiforme 211 - zambettakesii 861 Gra/7/z /o/a />/zoe« /c/5 615 Guilliermondella 384 - delphensis 232 - dobzhanskii 233 - drosophilarum 234 - fragilis 236 - /<3c?i5 233 - lodderi 235 - marxiana 236 - phaseolospora 234 - selenospora 381 - vuillemini 476 - wickerhamii 242 Guilliermondia - elongata 269 - fuluescens 269

211

872

Hanseniaspom 115,119,214 - antillarum 215 - apiculata 217 - apuliensis 215 - guilliermondii 215 - melligeri 215 - nodinigri 219, 220 - occidentalis 215 - osmophila 216 - pijperi 334 - uvarum 111 - valbyensis 218

- vineae 219 Hansenula 111, 351,418 - alcolica 488 - a/nz 282 - americana 283 - amylofaciens 748 - angusta 286 - anomala 287 - anomala var. ciferrii 299 - anomala var. heteromorpha 287 - anomala var. /onga 287 - anomala var. productiua 287 - anomala var. robusta 287 - anomala var. schneggii 287 - anomala var. sphaerica 287 - anomala var. subpelliculosa 344 - arabitolgenes 344 - 56c^7 291 - beijerinckii 416 - belgica 319 - bimundalis 291 - bimundalis var. americana 283 - bispora 287 - californica 413 - californica var. maltosa 413 - canadensis 295 - capsulata 296 - ciferrii 299 - coprophila 416 - dimennae 413 - dryadoides 301 - ellipsoidospora 352 - euphorbiaphila 302 - euphorbiiphila 302 - fabianii 303 - glucozyma 307 - henricii 311 - /io/5^n 312 - jadinii 314 - jauanica 287 - kluyveri 315 - lynferdii 317 - malanga 379 - matritensis 146 - minuta 324, 351 - w/5o 287 - mwo var. octosporus 287 - misumaiensis 352 - mrakii 417 - muscicola 340 - «zd;e« 287 - nonfermentans 324 - octospora 287 - Odessa 287 - ofunaensis 328 - /7a«z5' 287 - petersonii 332 - philodendra 333 - philodendri 333 - platypodis 132 - polymorpha 152, 286 - populi 335 - pozolis 237 - productiua 287 - saturnus 416 - saturnus var. subsufficiens 417

1023 - schneggii 287 - silvicola 340 - sphaerica I'^l - suaveolens 417 - subpelliculosa 344 - sydowiorum 344 - tannophilus 271 - ukrainica 287 - wickerhamii 305 - wingei 295 Hasegawaea - japonica 391 - japonica var. uersatilis 391 Helicogonium 197, 200 - jacksonii 197 Hemispora - coremiiformis 859 - pararugosa 872 - rugosa 872 Heterogastridium pycnidioideum //o//^>;a 207 - sinecauda 205, 207 Holtermannia 628 - corniformis 111 Hormoascus 133, 384 - ambrosiae 129 - philentomus 131 - platypodis 132 Hormonema 123 Hortaea 123 Hyalococcus beigelii 869 Hyalodendron 630, 773 - lignicola 113 - lignicola var. simplex 773 - lignicola var. undulatum 113 Hyphopichia burtonii 293 Hyphozyma 124 Hypomyces decipiens 184

614

Issatchenkia 115, 152, 172, 221, 350, 351 - occidentalis 221 - orientalis 111, 351 - scutulata 114 - scutulata var. exigua 224 - scutulata var. scutulata 224 - terricola 225 Itersonilia 630, 775 - pastinacae 775 - perplexans 115 - pyriformans 775 Kloeckera 115, 119, 220, 573, 580 - africana 219, 580 - antillarum 215 - apiculata 217, 219, 580 - apiculata var. ap/5 215 - opis 215, 581 - austriaca 217 - ^ret;/5 217 - Z)ret;z5 var. rohrbachense 217 - cacaoicola 216 - corticis 216, 581 - corticis war. pulquensis 218 - domingensis 216 - faecalis 160 - fluorescens 409

1024 Kloeckera (contd) - germanica 217 - indica 215 - japonica 218,581 - javanica 215, 219, 581 - javanica var. lafarii 215 - jensenii 215 - lafarii 215 - lindneri 581 - lindneri war. pelliculosa 217 - lodderi 111 - magna 216 - malaiana 215 - muelleri 217 - occidentalis 215 - santacruzensis 216 - Willi 216 Kloeckeraspora - occidentalis 216 - osmophila 216 - uvarum 217 - uineae 219 Kluyveromyces 115,227 - aestuarii 229 - africanus 230 - bacillisporus 230 - Wflrta^ 231 - bulgaricus 236 - cellobiooorus 247 - cicerisporus 236 - delphensis 232 - dobzhanskii 233 - drosophilarum 234 - fragilis 237 - /acfts 152, 233 - /acfts var. drosophilarum 234 - /acris var. /ac/i5 233 - lodderae 235 - lodderi 235 - marxianus 236 - marxianus var. bulgaricus 236 - marxianus var. dobzhanskii 233 - marxianus var. drosophilarum 234 - marxianus var. /ac//5 233 - marxianus var. marxianus 236 - marxianus var. uanudenii 234 - marxianus var. wikenii 236 - osmophilus 429 - phaffii 239 - phaseolosporus 234 - piceae I'M - polysporus 239 - thermotolerans 240 - uanudenii 12>A - veronae 240 - >vfl/rii 241 - wickerhamii 242 - wikenii 236 - yarrowii 243 Kockovaella 630, 777 - imperatae 111 - thailandica 11% Kodamaea 351 - ohmeri 329 Komagataea pratensis 415 Komagataella 351

Index oftaxa by genus and species - pastoris 331 Kondoa malvinella 686 Kuraishia 351 - capsulata 296 Kurtzmanomyces 630, 780, 879 - nectairei 780 - /ar^MS 781 La/aria 119,573,582 - americana 582 - caerulescens 582 - carnea 582 - cerasi 582 - coccinea 583 - communis 583 - confusa 583 - dearnessii 583 - deformans 583 - farlowii 583 - flavorubra 583 - johansonii 583 - /^ft/^m 583 - /ifl/fa 583 - polystichi 583 - populi-salicis 583 - populina 583 - pruni-subcordatae 583 - purpurascens 584 - robinsoniana 584 - tosquinetii 584 - M/WI 584 - virginica 584 Lasioderma serricorne 590 Laurobasidium lauri 615 Lecythophora 123 Leucosporidium 628, 670 - antarcticum 671 - capsuligenum 664 - / e / / / i 671 - frigidum 676 - gelidum 676 - lari-marini 652 - nivalis 676 - scottii 673 - stokesii 676 Lipomyces 115, 180, 248, 436, 597 - anomalus 141, 142 - japonicus 249 - kononenkoae 250 - kononenkoae ssp. kononenkoae 250 - kononenkoae ssp. spencer-martinsiae 250 - lipofer 251 - starkeyi 142, 252 - tetrasporus 252 Lodderomyces 116,151,254 - elongisporus 254 - opuntiae 150 - ludwigii 189 - magnusii 189 Malassezia 631, 782 - /M//«r 782 - ot;<2/w 782 - pachydermatis 782 - sympodialis 783 Mastigomyces ph ilippovii

561

Metschnikowia 116, 152, 207, 256 - agaves 257 - australis 258 - bicuspidata 259 - bicuspidata var. australis 258 - bicuspidata var. bicuspidata 259 - bicuspidata var. californica 259 - bicuspidata var. chathamia 259 - bicuspidata var. zobellii 266 - gruessii 260 - hawaiiensis 261 - kamienskii 259 - A^msii 262 - lunata 263 - pulcherrima 264 - reukaufii 265 - wickerhamii 259 - zobellii 266 - zygota 265 Metschnikowiella - bicuspidata 259 - krissii 262 - zoZ)e//n 266 Microanthomyces alpinus 308 Microbotryum 614 Micrococcus beigelii 869 Microdochium 123 Microsporon furfur 782 Microsporum brachytonum 863 Microstroma 615 M/x/a osmundae 357 -

accraensis 563 actoni All aegyptiaca 564 ^/6a 476 albicans 476 albicans var. non-liquefaciens 476 aWo/ 477 alvarezsotoi All argentina 564 arzrt' 308 ashfordi 476 asteroides 210, 858 balcanica A16 balzeri 872 bethaliensis All bonordenii 563 brasiliensis 872 bronchialis 563 buccalis A16 burgessi 563 butantanensis All Candida 476, 563 castellanii 264 cerebriforme ISl cornealis 420 cutanea All, 860 decolorans 476 enterica 563 faecalis 563 fioccoi All guilliermondii 308 guilliermondii var. pseudoguilliermondii 308 - harteri 476

Index oftaxa by genus and species -

inexorabilis All inexpectata lllf insolita 563 issavi 564 javanica 287 kochii 697 krusei 111 krusoides 113 macedoniensis 131 macedoniensoides 237 macroglossiae 571 macrospora ISl mannitofermentans Ml metalondinensis All metalondinensis var. alba All metalondinensis var. pseudolondinensis All - metatropicalis 563 - metchnikoffi 476 - microspora ISl - mortifera 237 - muhira 308 - murmanica 564 - nabarroi All - nigra ISl - nivea 563 - onychophila 536 - parakrusei 223 - parapsilosis 536 - paratropicalis 563 - parazeylanoides 572 - periunguealis All - pinoyi 476 - pinoyi var. nabarroi All - pinoysimilis All - productiva 287 - pseudoalbicans All - pseudobronchialis 563 - pseudoguilliermondii 308 - pseudolondinensis All - pseudolondinoides All - pseudometalondinensis All - pseudotropicalis 237 - pseudotropicalis var. metapseudotropicalis 237 - psilosis 476 - pullulans 869 - pulmonalis 476 - pulmonea Sll - richmondi All - rotunda 872 - rugosa 546, 872 - stellatoidea All - sulphurea 237 - tomentosa IHl - triadis All - tropicalis 563 - uvae 572 - vaginalis All - variabilis 293 - wn/ 174 - zeylanoides 571 - zeylanoides var. macroglossiae 572 Moniliella 123, 631, 785, 877 - acetoabutens 785 - i«^//is 786

- pollinis IHl - suaveolens 1%1 - suaveolens var. n/gra 787 - tomentosa 1%1 - tomentosa var. pollinis ISl Monospora bicuspidata 259 Monosporella bicuspidata 259 Mra^ia 628, 676 - frigida 676 - ge/zV/a 676 - nivalis 676 - stokesii 676 Myceloblastanon - albicans 476 - ashfordi 476 - bethaliensis All - brasiliense 872 - bronchiale 563 - candidum 563 - copellii All - cutaneum All - decolorans A16 - entericum 563 - faecalis 563 - ^ i ; r e / 477 - gifuense All - gruetzii All - guilliermondii 308 - insolitum 563 - krausi 308 - krusei 223 - linguae-pilosae 563 - macedoniensis 237 - metalondinense All - nabarroi All - niveum 563 - parakrusei 223 - paratropicale 563 - pinoyi A16 - pseudoalbicans All - pseudotropicalis 237 - psilose 476 - rotundatum ^11 - skutetzkyi All - tropicale 563 - tumefaciens-album 476 Mycelorrhizodes - cutaneum All - gruetzii All Mycocandida - inexpectata 223 - macroglossiae 571 - mortifera 237 - parapsilosis 536 - paratropicalis 563 - pelliculosa ISl - pinoysimilis All - pinoysimilis var. citelliana 237 - pseudotropicalis 237 - skutetzkyi All Mycoderma - asteroides 210, 858 - bordetii 223 - brasiliense ^11 - cerevisiae 569 - cerevisiae var. pulverulentum ISl

1025 - chevalieri 223 - cutaneum 860 - decolorans 319 - desidiosum All - gallica 569 - infestans 857 - /flc^Z5 234 - /a/anV 319 - lambica 305 - malti-juniperi 210 - matalensis 210 - monosa 223 - pararugosa %11 - pseudoalbicans All - pulmoneum Sll - pulverulenta ISl - rotundatum %11 - rugosa 546, 872 - tannica 319 - valida 319 - vanlaeriana 319 - vini 569 - vini-lafarii 319 - y/n/ var. paradoxa 569 Mycokluyveria - cerevisiae 569 - decolorans 319 - /a/an7 319 - tannica 319 - yflZ/Jfl 319 - t;m/ 569 Mycotorula - albicans A16 - albicans var. vuillemini 476 - alvarezsotoi All - brumptii 494 - cisnerosi 821 - colostri 807 - Jam7« 240 - dimorpha 564 - famata 161 - germanica 821 - guilliermondii 308 - humicola 757 - interdigitalis 564 - intermedia 175, 516 - japonica 564 - ^ ^ ^ r 237 - ^raw5/ 308 - /ac^/5 237 - lactosa 237 - lambica 547 - lipolytica 420 - macedoniensis 237 - monosa 305 - mucinosa %11 - muris 820 - periunguealis All - pinoyi A16 - pseudotropicalis 237 - pulmonalis 821 - robusta 362 - rosea-corallina 814 - rubescens 690 - rugosa 546 - sinensis All

1026

/n6?ex oftaxa by genus and species

Mycotorula {cont'd) - tonsillae All - trimorpha 564 - uerticillata All - vesica 536 - zeylanoides 571 Mycotoruloides - aldoi All - argentina 564 - krusei 223 - macedoniensis 237 - ovalis All - triadis All - trimorpha 564 - unguis 536 Myriogonium 123, 198 - odontiae 198 Myxozyma 119, 436, 573, 592, 597 - geophila 593 - kluyveri 593 - lipomycoides 594 - melibiosi 594 - monticola 595 - mucilagina 595 - neotropica 597 - nipponensis 597 - sirexii 597 - udenii 596 - vanderwaltii 596 Nadsonia 116, 220, 268, 602 - commutata 268 - fulvescens 269 - fulvescens var. elongata 269, 373 - fulvescens var. fulvescens 269 - richteri 269 - slovaka 757 Naganishia globosa 748 Nakazawaea 351 - /io/5^// 312 Nectaromyces - cruceatus 260 - reukaufii 260 Nematospora 207 - corv// 202, 207 - gossypii 204 - lycopersici 202 - nagpuri 202 - phaseoli 202 - sinecauda 205, 207 Neogeotrichum pulmoneum 872 Neolecta 590 Octosporomyces 394 - japonicus 391 - octosporus 392 Ogataea 351 - glucozyma 307 - henricii 311 - kodamae 317 - minuta 324 - minuta var. nonfermentans - philodendri 333 - /7m/ 334 - polymorpha 286 - wickerhamii 305

324

Oidiomyces unguium 476 OzW/ww - albicans 476 - asteroides 210 - brasiliense 872 - citri-aurantii 209 - cutaneum 860 - gracile 862 - Aww/ 210 - /£7c^w 210 - /ac^/5 var. luxurians 210 - ludwigii 190 - matalense 210 - moniliiforme 866 - nubilum 210 - obtusum 210 - pullulans 869 - pulmoneum 872 - rotundatum 872 - suaueolens 577, 757 - suaueolens var. minuta 210 - tropicale 563 Onychomyces unguium A16 Oospora - cerebriformis 872 - citri-aurantii 209 - cfw/ciYa 861 - fragrans 577 - fragrans var. minuta 211 - g/ga5 577 - gracile 862 - granulosa SI2 - humi 210 - /ac^/5 210 - /ac?/5 var. exuberans 211 - /ac^/5 var. obtusa 210 - lactis Yar. parasitica 210 - ludwigii 190 - magnusii 190 - matalensis 210 - moniliiformis 866 - nubila 210 - pullulans 869 - pulmonea 872 - rotundata 872 - sericea 190 - suaueolens 757, 787 - uariabilis 293 - wn/ 174 Oosporidium 119, 573, 598 - fuscans 869 - margaritiferum 598 Oosporoidea lactis 210 Pachysolen 116,271 - pelliculatus 111 - tannophilus 111 Pachytichospora transuaalensis 369 Paracoccidioides brasiliensis SI2 Parasaccharomyces - albicans 476 - ashfordi Aid - candidus 563 - colardi All - harteri A16 - intestinalis All

- irritans 563 - oosporoides All - talicei 564 Paratorulopsis - aeria lAl - apis 482 - banheggii 162 - Z7w#on« 809 - melibiosi 594 - noruegica 532 - /7mM5 540 - pseudoaeria 748 - <2/Z>w5 476 - asteroides 858 - balzeri 872 - butantanensis All - flareri 162 - macroglossiae 572 - minor 162 - periunguealis All - perryi 563 - rugosus 872 - zeylanoides 571 Petasospora - chambardi 298 - pas tori 331 - /?/«/ 334 - rhodanensis 338 - strasburgensis 343 Phaeococcomyces 123 Phaeotheca 123 P/ia/^a 631,789 - rhodozyma 718, 789 Phialemonium 124 Phialoascus 200 - borealis 200 Phialophora 123 Pic/iifl 111, 116, 152, 273, 390, 399, 418 419 - abadieae 172, 345 - acaciae 282 - adzetii 162 - aganobii 321 - alcoholophila 319 - alcoholophila var. naganishii 319 - a//ii 282 - ambrosiae 129, 133 - americana 283 - amethionina 284 - amethionina var. amethionina 284 - amethionina var. fermentans 297 - amethionina var. pachycereana 284 - amylophila 285 - angophorae 286 - angusta 152, 286 - anomala 287 - antillensis 288 - />ar^m 289 - belgica 319 - belgica var. microspora 315 - besseyi 290 - bimundalis 291 - />i5p
Index oftaxa by genus and species -

cactophila 294 californica 352 calliphorae 319 canadensis 295 cantarellii 166 capsulata 296 caribaea 297 carsonii 158, 172 castellii 159 castillae 298 cellobiosa 321 chambardii 298 c/ioJa^i 319 chodati YSiT. fermentans 319 chodati var. trumpyi 319 cicatricosa 130, 133 ciferrii 299 coudertii 160 crossotarsi 131 delftensis 299 - derossii 319 - deserticola 300 - dispora 388 - dombrowskii 305 - dryadoides 301 - Jw/>/a 572 - etchellsii 160, 172 - euphorbiae 301 - euphorbiiphila 302 - fabianii 303 - faecalis 160 - farinosa 304 - farinosa var. japonica 304 - farinosa var. lodderi 319 - fasciculata 131 - fermentans 305 - fermentans var. rugosa 319 - fibuliger 2)11 - finlandica 305 - fluxuum 306 - galeiformis 307 - glucozyma 307 - guilliermondii 308 - hampshirensis 309 - hangzhouana 422, 423 - hansenii 161 - haplophila 310 A^^J/i 310 - heimii 311 - henricii 311 /lo/sfti 312 - humboldtii 172, 188 - hyalospora 319 - zW/ca 319 inositovora 313 jadinii 314 japonica 315 - kluyveri 315 kluyveri var. cephalocereana 316 - kluyveri var. eremophila 316 - kluyveri var. kluyveri 315 - kodamae 317 - krusei 388 - kudriavzevii 223, 226 - labacensis 352 - lindneri 324

lynferdii 317 - mandshurica 319 - marama 163 m^^fia 318 - megalospora 352 - melissophila 164 - membranaefaciens var. acidificans 319 - membranaefaciens var. belgica 319 - membranaefaciens var. calliphorae 319 - membranaefaciens var. mandshurica 319 - membranaefaciens var. sicereum 319 membranifaciens 319 methanolica 321 - methanothermo 352 methylivora 321 mexicana 322 meyerae 323 - microspora 382 - minuscula 304 minuta 324 minuta var. minuta 324 minuta var. nonfermentans 324 - WI/50

304

mississippiensis 151, 325 - miyazi 319 - wog/z 304 - moniliformis 352 - monospora 131 - mucosa 415 - muscicola 340 naganishii 325 nakasei 326 nakazawae 'ill nakazawae var. akitaensis 327 nakazawae var. nakazawae 327 - neerlandica 319 - nonfermentans 380 norvegensis 328 ofunaensis 328 ohmeri 329 onychis 330 opuntiae 330 opuntiae var. thermotolerans 346 - orientalis 223, 226, 352 - ouaria 352 pastoris 331 petersonii 332 petrophilum 304 philodendri 333 philogaea 333 pijperi 334 /?i«i 334 polymorpha 166, 172 populi 335 pseudocactophila 336 pseudopolymorpha 167 pulque 319 punctispora 319 quercuum 337 rabaulensis 337 radaisii 352 rhodanensis 338 robertsiae 168 robertsii 168 ro^a 815 saccharophila 319

1027 - 5a/to/ 389 - 5a^e 304 - salicaria 338 - sargentensis 417 - saturnospora 413 - scaptomyzae 319 - sc
1028 Proteomyces - asteroides 858 - balzeri 872 - cornealis 420 - cutaneus 860 - infestans 857 - muris 820 - variabilis 872 Protomyces 111, 116, 353, 356, 357, 384, 601 - gravidus 354 - inouyei 354 - inundatus 354 - lactucaedebilis 355 - macrosporus 355 - pachydermus 356 Protomycopsis 357 Prototheca 883 - chlorelloides 886 - ciferrii 886 - crieana 887 - filamenta 858 - hydrocarbonea 886 - krugeri 887 - moriformis 884 - moriformis var. betulinus 884 - pastoriensis 887 - portoricensis 886 - portoricensis var. ciferrii 887 - portoricensis var. trispora 887 - salmonis 886 - seqbwema 886 - stagnora 885 - trispora 886 - tropicalis 887 - ubrizsyi 886 - u/m^a 885 - uiscosa 885 - wickerhamii 886 - ^o/T^i 886 - zc/T^i var. hydrocarbonea 886 - zfl»/>^i var. portoricensis 886 - zo/7^i var. ^fl>p^i 886 Pseudohansenula - indica 319 - peiping 344 Pseudomonilia - albomarginata 525 - deformans 420 - inexpectata 223 - matalensis 210 - mesenterica 525 - m/56> 564 - rubicundula 697 - zeylanoides 571 Pseudomycoderma - matalensis 210 - mazzae 237 - wwo 223 Pseudosaccharomyces - africanus 219 - antillarum 215 - apiculatus 217 - austriacus 217 - corticis 216 - germanicus 217

Index of taxa by genus and species - indicus 215 - jauanicus 215 - Jensenii 215 - lafarii 215 - lindneri 581 - magnus 216 - malaiana 215 - muelleri 217 - occidentalis 215 - santacruzensis 216 - wz/// 216 Pseudozyma 403, 631, 790 - antarctica 791 - aphidis 792 - flocculosa 792 - fusiformata 793 - prolifica 794 - rugulosa 794 - tsukubaensis 795 Reniforma 631, 798 - srrw^s 798 Rhinocladiella 123 Rhodomyces - dendrorhous 718 - kochii 697 Rhodosporidium 628, 678 - babjevae 679 - bisporidii 646 - capitatum 648 - dacryoideum 680 - diobovatum 682 - ^MWfl/^

683

- infirmo-miniatus 650 - kratochvilovae 684 - lusitaniae 685 - malvinellum 686 - paludigenum 687 - sphaerocarpum 688 - toruloides 690 Rhodotorula 572, 631, 692, 800 - acheniorum 805 - aclotiana 821 - acuto 805 - a//7/na 748 - araucariae 806 - armeniaca 806 - aurantiaca 807 - awrea 759 - auriculariae 807 - bacarum 808 - biourgei 821 - bogoriensis 808 - bronchialis 814 - 6 i # ? / i « 809 - colostri 807 - corallina 821 - cresolica 827 - crocea 807 -
-

futronensis 813 gelatinosa 748 ^/MftViis 601, 814 glutinis var. aurantiaca 807 glutinis var. dairenensis 814 glutinis var. glutinis 814 glutinis var. infirmo-miniata 650 glutinis var. lusitanica 814 glutinis var. rubescens 690 glutinis var. rw/w/a 814 glutinis var. rw/w^a 690 glutinis var. ^a/to? 814 glutinis var. salinaria 688 gracilis 690 graminis 815 grinbergsii 821 hasegawae 654 hinnulea 816 hordea 816 hylophila 817 infirmo-miniata 650 ingeniosa 817 javanica 818 /flctosa 818 laryngis 820 laurentii 759 lignophila 818 /m/ 760 longissima 690 ludwigii 821 luteola 760 macerans 760 marina 819 matritense 821 minor 162 minuta 820 minuta var. texensis 820 mucilaginosa 820 mucilaginosa var. carbonei 821 mucilaginosa var. kentuckyi 821 mucilaginosa var. pararosea 821 mucilaginosa var. plicata 821 mucilaginosa var. sanguinea 821 muscorum 822 «/^en5 759 nothofagi 823 /?a///J« 820 peneaus 759 p/iiYv/a 823 phylloplana 824 /7i7flft* 824 pilimanae 821 pulcherrima 264 pustula 825 ro^fl 815 rwZ?^//^ 821 rubescens 690 rwZ?ra 820 rwZjra var. curuata 820 rw/jra var. /o«g<2 820 rw^ra var. marina 821 rw/w/a 814 sanguinea 821 sanniei 821 sinensis 650 slooffiae 820

Index of taxa by genus and species - sonckii 826 - suganii 814 - terrea 814 - texensis 820 - texensis var. minuta 820 - tokyoensis 820 - tokyoensis var. flava 754 - ulzamae 821 - vanillica 827 - vuilleminii 821 - z5o/^z/ 820 Rhodozyma montanae 718 Saccharomyces 116, 171, 172, 226, 245, 358, 407, 432 - abuliensis 360, 362 - aceris-sacchari 287 - acetaethylicus 287 - «ce// 362 - acidifaciens 424 - acidifaciens var. halomemhranis 431 - acidosaccharophillii 362 - aestuarii 229 - albasitensis All - albicans 476 - amurcae All - anamensis 361 - annulatus 361 - anomalus ISl - anomalus var. belgicus 319 - apiculatus 1X1 - astigiensis 411 - awamori 361 - bacillaris 559 - ^«//z/ 424 - Z)«//« var. osmophilus 431 - balzeri Sll - barnettii 359 - batatae 361 - bayanus 360 - beticus 362 - bisporus 426 - bisporus var. mellis 429 - blanchardi 656 - boulardii 362 - brasiliensis 361 - breweri 656 - buccalis 476 - capensis 362 - carbajali 362 - carlsbergensis 367 - carlsbergensis var. alcoholophila 362 - carlsbergensis var. mandshuricus 361 - carlsbergensis var. monacensis 361 - carlsbergensis var. polymorphus 361 - carlsbergensis var. ualdensis 361 - carmosousae 148 - cartilaginosus var. cartilaginosus 362 - cartilaginosus var. italiens 362 - castellii 360 - cavernicola 236 - cerasi 361 - cerevisiae 152, 244, 361, 410 - cerevisiae agavica syluestre 361 - cerevisiae var. cratericus 361 - cerevisiae var. ellipsoideus 361

- cerevisiae war. festinans 361 - cerevisiae var. fructuum 362 - cerevisiae var. marchalianus 361 - cerevisiae var. onychophilus 361 - cerevisiae var. pelliculosa 362 - cerevisiae var. pulmonalis 361 - cerevisiae var. terrestris 366 - cerevisiae var. tetraspora 366 - cerevisiae var. turbidans 361 - chambardi 298 - cheresiensis 361 - chevalieri 361 - chevalieri var. atypicus 237 - chevalieri var. lindneri 361 - chevalieri var. torulosus 404 - chodati 361 - czV/n 426 - cordubensis 362 - coreanus 361 - cratericus 361 - dairenensis 363 - delbrueckii 404 - delbrueckii var. mongolicus 404 - delphensis 131 - diastaticus 362 - disaccharomellis 164 - disporus 388 - dobzhanskii 233 - dombrowskii 305 - douglasii 366 - drosophilarum 134 - drosophilarum var. acellobiosus 234 - elegans 424 - elegans var. intermedia 424 - ellipsoideus 361 - ellipsoideus var. ma/or 362 - ellipsoideus var. umbra 362 - elongasporus 254, 255 - elongatus 361 - elongisporus 254 - eryobotryae 361 - eupagycus 428 - exiguus 364 - farinosus 304 - fermentati 404 - festinans 361 - florentinus 428 - florenzani 405 - formosensis 361 - fragilis 236 - fragilis var. bulgaricus 236 - fragrans 236 - fresenii 814 - fructuum 362 - gaditensis 362 - globosus 360 - g/w^m/5 814, 820 - guttulatus 154 - hansenii 161 - heterogenicus 360 - hienipiensis 362 - hispalensis 362 - hispanica 362 - hominis 656 - hutensis 362 - hyalosporus 319

1029 - ///c/5 361 - inconspicuus 405 - intermedius 361 - intermedius var. turicensis 361 - intermedius var. valdensis 360 - inusitatus 360 - italicus 362 - italicus var. melibiosi 362 - jadinii 314 -joannae 362 - ^ e ^ r 237 - kloeckeri 161 - kloeckerianus 406 kluyveri 365 - krusei 111 - kunashirensis 371 - /ac^zs'

-

233

lindneri 361 linguae-pilosae 563 lithogenes 656 lodderae 235 lodderi 235 /ogo^ 361 - ludwigii 372 - macedoniensis 237 - malacitensis 427 • mandshuricus 361 mangini 361 mangini var. case/ 361 mangini var. mwo 362 - mangini var. tetraspora 366 marchalianus 361 martiniae 371 - marxianus 236 • me//w 429 membranaefaciens 319 membranifaciens 319 microellipsodes 430 microellipsodes var. osmophilus 405 • microellipsoides 430 W/50 304,431 monacensis 367 mongolicus 370 montanus 427 - mrakii 430 - muciparus 236 - multisporus 361 - mycoderma 569 - mycoderma punctisporus 319 - neoformans 656 nilssoni 404 - nilssoni var. malacitensis 427 - norbensis 362 - Odessa 361 oleaceus 362 - oleaginosus 362 - onubensis 362 • orientalis 223 - osmophilus 431 - oi;a//5 782 • oviformis 361 • oviformis var. bisporus 362 oviformis var. cheresiensis 361 oxidans 362 paradoxus 366 pas tori 331

1030

Index of taxa by genus and species

Saccharomyces (contd) - pastorianus 367 - pastorianus-arborescens 305 - peka 362 - phaseolosporus 234 - pint 334 - placentae 431 - pleomorphus 573 - plimmeri 656 - polymorphus 166 - polysporus 239 - pombe 393 - praecisus 362 - pretoriensis 406 - prostoserdovii 362 - pseudopolymorphus 167 - pulcherrimus 264 - pyriformis 319 - rhodanensis 338 - robustus 362 - ra^e/ 404 - roseus 814 - rosinii 367 - rowxn 431 - rowx// var. halomembmnis 431 - raia:/^ var. polymorphus 429, 431 - rw^er 820 - saitoanus 405 - 5aA:e

-

- 5'c»y<2

-

361

saturnus 416 scandinavicus 305 servazzii 368 shaoshing 361 siluestris 365 smittii 365 sociasii 234 431

spencerorum 368 sphaericus 287, 782 steineri 362 stellatus 559 strasburgensis 343 ^e//wm 134 tellustris 134, 135 terricolus 225 thermantitonum 361 thermotolerans 240 to^o 361 torulosus 404 transvaalensis 369 tubiformis 360 tumefaciens-albus 476 turbidans 361 unguium 416 unisporus 370 uvarum 360 uvarum var. carlsbergensis 362 uvarum var. melibiosus 362 i;a/er 405 valesiacus 361 validus 361 vanudenii 234 vercitillatus 537 veronae 240 i;m/ 362 vini-muntz 361

- fm/ var. cartilaginosus 362 - fm/ var. cerevisiae 362 - vordermanii 361 -

t;o55/7

537

- wickerhamii 242 - willianus 361 - j e J o 361 Saccharomycodes 116,220,372 - bisporus 372 - lipophora 372 - ludwigii ^11 - ludwigii var. bisporus 372 - ludwigii var. i;m/ 372 - mestris 424 - 5me«5/5 269, 270, 373 - i;m/ 372 Saccharomycopsis 116,374,421 - capsularis 375 - crataegensis 376 - fermentans 317 - fibuligera 311 - guttulatus 154 - hordei 311 - javanensis 379 - lindneri 311 - lipolytica 384, 420, 421 - malanga 379 - pseudolipolytica 420 - schoenii 380 - selenospora 381 - synnaedendra 382, 384 - w'/ii 383 Sachsia suaveolens 757, 787 Sachsiella suaveolens ISl Saenkia bispora 372 Saitoella 111, 119, 357, 573, 590, 600 - complicata 600 Sakaguchia dacryoides 680 Sarcinomyces 123, 124 -

mA7«

863

Sarcinosporon inkin 863 Saturnispora 117, 351, 387, 419 - ahearnii 387 - Ji«p
351, 388

- s«itoi 389 - zaruensis 390 Schizoblastosporion 119, 573, 602 - chiloense 602 - globosum 536 - gracile 536 - kobayashii 263 - starkeyi-henricii 270, 602 Schizosaccharomyces 111, 117, 357, 384, 391 - acidodevoratus 393 - asporus 393 - formosensis 393 - formosensis var. akoensis 393 - formosensis var. tapaniensis 393 - japonicus 391 - japonicus var. versatilis 391 - javanensis 379 - liquefaciens 393 - malidevorans 393 - mellacei 393 - octosporus 392

-

/?/««« 393 pombe 393 pombe var. acidodevoratus 393 pombe var. malidevorans 393 santawensis 393 slooffiae 392 to/Yo

393

- versatilis 391 - vordermanii 393 - zambettakesii 861 Schroeteria 614 Schwanniomyces 351 - alluvius 165 - castellii 165 - hominis 405 - javanensis 379 - occidentalis 165, 172 - occidentalis war. persoonii - persoonii 165 - ukrainicus 165 Selenotila - intestinalis 263 - />dtoto 538 - intestinalis 263 - /76/toto 538 Sirobasidium 628 - intermedium 710 - magnum 111 Sitodrepa panicea 590 Smithiozyma 253 - japonica 249 Spermophthora 207 - gossypii 201 Sphacelotheca 614 Sporidiobolus 629, 693 - johnsonii 692, 694 - microsporus 696 - pararoseus 694 - ruineniae 696 - ruineniae var. coprophilus - salmonicolor 697 - veronae 697 Sporobolomyces 631, 828 - albidus 151 - alborubescens 821, 830 -

a/Z?w5

-

antarcticus 791 boleticola 836 carnicolor 695 coprophilus 696 coralliformis 697 elongatus 830 falcatus 831 foliicola 831 gracilis 832 griseoflavus 832 hispanicus 697 holsaticus 694 inositophilus 833 intermedius 725 japonica 695 kluyveri-nielii 834 lactophilus 834 marcillae 695 miniatis 836

641

165

696

Index of taxa by genus and species - miscanthi 726 - naganoensis 726 - odorus 697 - oryzicola 835 - pararoseus 694 - philippovi 697 - photographus 836 - photographus var. alborubescens 821 - photographus var. odorus 697 - phyllades 727 - phylladus 727 - phyllomatis 835 - pollaccii 836 - puniceus 739 - roseus 836 - rosew5 var. madurae 836 - rw^^r 695, 837 - ruberrimus var. a/Z)^^ 836 - ruberrimus var. ruberrimus 836 - rubicundulus 697 - salicinus 838 - salmoneus var. fl/Z)W5 836 - salmoneus var. salmoneus 836 - salmonicolor 697, 839 - salmonicolor var. a/6w5 836 - salmonicolor war. fischerii 697 - salmonicolor var. salmoneus 836 - sasicola 839 - shibatanus 694, 839 - singularis 839 - subbrunneus 840 - subroseus 728 - tewww 836 - tsugae 841 - weijmanii 725 - xanthus 841 - yamatoanus 729 - yuccicola 729 Sporopachydermia 117,395 - cereana 395 - lactativora 396 - quercuum 397 Sporothrix 448 - catenata 400 - flocculosa 792 ~ fungorum 401 - rugulosa 794 Sporotrichum - anglicum 293 - carougeaui 293 - /wr/wr 782 - infestans 857 - spicatum 186 Stegobium paniceum 590 Stephanoascus 117, 400, 442, 448, 604 - ciferrii 400 - farinosus 401 - flocculosus 403, 792 - rugulosus 403, 794 - smithiae 402 Sterigmatomyces 173, 631, 844, 879 - acheniorum 805 - aphidis 792 - ^/w«^ 844 - fuzhouensis 769 - halophilus 351

- halophilus var. indicus 845 - indicus 351, 845 - nectairei 780 - penicillatus 110 - polyborus 111 - tursiopsis 769 - wingfieldii 878 Sterigmatosporidium 629, 700 - polymorphum 700 Symbiotaphrina 590 Sympodiomyces 119, 448, 573, 603, 604 - parvus 603 Sympodiomycopsis 604, 631, 846 - paphiopedili 846 Syringospora - albicans 476 - claussenii All - cutanea 411 - dimorpha 564 - hasegawae All - inexorabilis All - issavi 564 - negroni All - psilosis A16 - robinii 476 - stellatoidea All - uuae 572

Taphridium 357 Taphrina 111, 119, 356, 357, 384, 601 - wiesneri 601 Tilletiaria 629, 703 - anomala 703 Tilletiopsis 632, 848 - albescens 848 - cremea 852 - /ayfl 849 - fulvescens 850 - lilacina 852 - wi/ior 851 - mmor var. ^«t;a 849 - pallescens 851 - washingtonensis 852 Tjibodasia pezizoidea 618 7brw/a - aclotiana 821 - aena 747 - alactosa 364 - fl/Z>zJa 748 - «//?/«« 748 - aurantiaca 807 - flwre<3 759 - Candida 161, 546 - cinnabarina 836 - colliculosa 404 - corallina 821 - cremoris 231 - dattila 240 - decolans 821 - dematia 1%1 - fermentati 308 - ^fli;a 754 - flauescens 759 - gelatinosa 748 - geotricha 210

1031 - globosa 146 - glutinis 814 - gropengiesseri 510 - heveanensis 756 - histolytica 656 - holmii 364 - humicola 757 - infirmo-miniata 650 - ^/em 656 - lactis-condensi 519 - lambica 547 - laurentii 759 - lipofera 251 - lipolytica 420 - /w^eo/a 760 - me//w 786 - mineralis 314 - miniata 814 - minuta 820 - molischiana 296 - monosa 305 - mucilaginosa 820 - nasalis 656 - w/gra 787 - photographa 836 - plimmeri 656 - pulcherrima 264 - rubefaciens 264 - rubescens 690 - rwZ)ra 814 - rw6ra var. a 814 - rw/w/a 814 - sanguinea 821 - shibatana 694 - sphaerica 23A - suganii 814 - w?///5 314 Torulaspora 117, 171, 172, 226, 245, 404, 407, 432 - amurcae All - benedictae 405 - carsonii 158 - castellii 159 - ciWn 426 - coudertii 160 - delbrueckii 152, 404 - etchellsii 160 - eupagyca 428 - fermentati 404 - florentina 428 - formicaria 170 - franciscae 406 - globosa 406 - hansenii 161 - inconspicua 405 - manchurica All - melissophila 164 - microellipsoides 430 - mongolica 404 - mrakii 430 - nilssoni 404

- phaffii 166 -

polymorpha 166 pretoriensis 406 pseudopolymorpha ro5e/ 404

167

1032 Torulaspora {cont'd) - tamarii 567 - vafer 405 - uanriji 170 - yarrowii 170 Torulopsis - acidi-lactici 526 - acris var. granulosa 748 - aeria lAl - alba 664 - albida 748 - albida var. japonica 748 - albus 664 - anatomiae 479 - anomala 567 - apicola 481 - a/7w 482 - apis var. galacta 507 - armenti 162 - arnaudii 499 - aurantia 821 - aurantiaca 807 - auriculariae 807 - austromarina 484 - azyma 485 - bacarum 808 - bacillaris 559 - bacillaris var. oZ)e5fi! 481 - biourgei 821 - bombicola 490 - bouina 134 - breweri 656 - bronchialis 814 - ^M#>«// 809 - burgeffiana 264 - californicus 319 - cambresieri 404 - Candida 161, 546 - Candida var. marina 546 - Candida var. nitratophila 564 - cantarellii 492 - capsuligena 664 - capsuligenus 664 - camescens 759 - caroliniana 519 - carpophila 308 - castellanii 264 - castellii 493 - czYrw^ 502 - colliculosa 404 - conglobata 496 - copellii All - corallina 821 - costantini 656 - cylindrica 174 - Jam/a 240 - dattila var. armeniaca 748 - dattila var. armeniensis 748 - dattila var. rohrbachense 264 - dendrica 497 - diffluens 748 - domercqiae 411 - domercqii 411 - e«o^z7 488 - ernobii 501 - etchellsii 502

Index oftaxa by genus and species - ethanolitolerans 503 - ethanolitolerans var. m/«or 503 - famata 161 - flauescens 759 - fragaria 811 - fructus 507 - fujisanensis 812 - geochares 508 - glabrata 508 - globosa 146 - glutinis 814 - gropengiesseri 510 - haemulonii 511 - halonitratophila 502 - halophilus 567 - harteri 476 - heueanensis 756 - histolytica 656 - holmii 364 - /io/mn" var. acidi-lactici 526 - hominis 656 - hominis var. honduriana 656 - humilis 513 - inconspicua 514 - inconspicua var. filiforme 514 - ingeniosa 817 - insectalens 514 - interdigitalis 264 - karawaiewii 517 - ite^r 237 - kestonii 308 - ATM/5«

-

518

lactis-condensi 519 larvae 537 laurentii 759 linguae-pilosae 563 lipofera 251 liquefaciens 748 lithogenes 656 /w^eo/a 760 macroglossiae 571 magnoliae 521 mannitica 821 mannitofaciens 567 m a m 523 melibiosum 594 melissophila 164 me«<3 821 methanolouescens 324 methanophiles 296 methanosorbosa 526 methanothermo 286 minor 162 minuta 820 minuta var. americana 814 mwo 527 wogn 431 molischiana 296 mucilaginosa 820 mucilaginosa var. carbonei 821 mucilaginosa vai. pararosea 821 mucilaginosa YSLT. plicata 821 multigemmis 528 multis-gemmis 528 musae 528 nadaensis 748

-

nagoyaensis 526 navarrensis 524 nemodendra 531 neoformans var. sheppei 656 nitratophila 531 nitritophila 821 nodaensis 502 noruegica 532 osloensis 431 pampelonensis 524 /7e/?ara 538 petrophilum 420 /7/zz7y/a 823 pignaliae 539 /?//«// 824 pintolopesii 134, 135 pintolopesii var. slooffii 134 />/nM5 540 plimmeri 656 pseudoaeria 748 psychrophila 542 ptarmiganii 748 pulcherrima 264 pulcherrima var. rw^ra 264 pulcherrima var. variabilis 264 pustula 825 ro5ea 264 roseus 814 rotundata 748 n/Z^ra 820 rw/w/fl 814 saccharini 498 saccharum 411 5azYo/ 814 5a^e 547 salmanticensis 548 sanguinea 821 sanniei 821 schatavii 551 silvatica 554 somala 836 sonorensis 556 sorbophila 557 spandovensis 558 sphaerica 234 stellata 559 stellata var. cambresieri 404 taboadae 405 tannotolerans 243 terrestris 682 tonsillae 563 torresii 562 w^iVw 314 M^//w var. mo/or 314 Mi;ae 572 M{;ae var. mwo 532 vanderwaltii 566 vanzylii 532 vartiovaarae 567 vartiovaarai 567 versatilis 567 vinacea 492 westerdijkii 162 wickerhamii 570 xestobii 571 xylinus 308

Index oftaxa by genus and species Tremella 629 - aurantia 111 - brasiliensis 111 - cinnabarina 713 - coalescens 713 - encephala 714 - foliacea 714 - fuciformis 715 - globispora 715 - indecorata 716 - mesenterica 716 - moriformis 111 Tricholomopsis rutilans 196 Trichomonascus 199 - mycophagus 199 Trichosporiella sporotrichoides 870 Trichosporium balzeri ^11 Trichosporon 440, 442, 632, 854 - aculeatum 439, 440 - adeninovorans 441, 442 - aneurinolyticum SI2 - appendiculare 308 - aquatile 856 - arenicola 329 - flsa/iii 857 - asteroides 858 - atlanticum 483 - bacangense 871 - balzeri 872 - beemeri 864 - behrendii 293 - ^e/ge/n' 869 - beijingense 871 - brasiliense 872 - brassicae 859 - capitatum 186 - cerebriforme 872 - coremiiforme 859 - cutaneum 860 - cutaneum var. curuatum 872 - cutaneum var. infestans 857 - cutaneum var. jirouecii 864 - cutaneum var. multisporum 865 - cutaneum var. peneaus 857 - dendriticum 223 - diddensiae 498 - domesticum 872 - dulcitum 861 - equinum 872 - faecale 862 - fennicum 503 - fermentans 576 - figueirae 857 - fuscans 869 - gracile 862 - granulosum 872 - hellenicum All - hortai %11 - humahuaquensis 872 - infestans 857 - i/f^i/i 863 - jirovecii 864 - klebahnii 578 - Arw^e/ 223 - laibachii 865 - /oZ)o/ 857

- lodderae 570 - lodderi 570 - loubieri 866 - lutetiae 862 - margaritiferum 598 - maritimum 523 - matalense 210 - melibiosaceum 503 - minor 860 - moniliiforme 866 - montevideense 867 - mucoides 868 - multisporum 865 - oryzae 791 - ovoides 869 - pararugosum Sll - pardi 872 - penicillatum 578 - piscium 572 - pullulans 869 - ribeiroi 872 - rotundatum S71 - rugosum 872 - sericeum 190 - sinense 871 - sporotrichoides 870 - terrestre 441 - undulatum 872 - uariabile 293 - veronae 311 Trichosporonoides 123, 632, 873 - australiensis Sll - madida 873 - megachiliensis 874 - nigrescens 875 - oedocephalis 875 - spathulata 876 Trigonopsis 119, 573, 605 - variabilis 399, 605 Trimorphomyces 629 - papilionaceus 111 Tsuchiyaea 632, 878 - wingfieldii 878

-

antarctica 791 aquatica 750 bogoriensis 808 curvata 752 diffluens 810 frigida 676 fujisanensis 812 gelida 676 humicola 151 ingeniosa 817 nivalis 676

- p/j/Zy/fl 823 - 5com/ 673 - tsukubaensis Volkaria 357

795

Waltiozyma mucosa 415 Waltomyces 253 - lipofer 251 Wickerhamia 117, 220, 409 - fluorescens 409 Wickerhamiella 117,411 - domercqiae 411, 421 - anomala ISl - belgica 319 - bispora ISl - chodati 319 - jauanica 1%1 - margaritae 1%1 - Odessa 1%1 - productiva 1%1 - saturnus 416 - schneggii 1^1 - trumpyi 319 Williopsis 117,351,390,413 - beijerinckii 416 - californica 413 - capsularis 375 - mrakii 417 - mucosa 415 - pratensis 415 - salicorniae 416 - sargentensis 417 - saturnus 416 - saturnus var. mrakii 351, 417 - saturnus var. sargentensis 351, 417 - saturnus var. saturnus 416 - saturnus var. suaveolens 417 - saturnus var. subsufficiens 417 - suaveolens 417 - subsufficiens 417 Wingea 351 - robertsii 168 Xanthophyllomyces 629, 718 - dendrorhous 718

Udeniomyces 741 - megalosporus 735 - piricola 131 ~ punicea 739 - pyricola 131 Ustilago 614 - maydis 796

Vanderwaltia vineae

1033

219

Yamadazyma 351 - acaciae 282 - besseyi 290 - castillae 298 - farinosa 304 - guilliermondii 308 - haplophila 310 - inositovora 313 - w^J/a 318 - mexicana 322 - nakazawae 327 - ohmeri 329 - philogaea 333 - scolyti 339 - segobiensis 340 - spartinae 341 - stipitis 342 Farww/a 118,384,420 - lipolytica 152, 420

1034

Zendera - ouetensis 190 - tetrasperma 192 Zooglea beigeliana 869 Zygoascus 118,422 - hellenicus 422 Zygofabospora 246 - aestuarii 229 - delphensis 232 - dobzhanskii 233 - drosophilarum 234 - krassilnikovii 234 - lactis 234 - lodderi 235 - marxiana 236 - phaseolospora 234 - thermotolerans 240 - wfifM 241 - wickerhamii 242 Zygohansenula - californica 413 - minuta 324 Zygolipomyces - lactosus 252 - tetrasporus 252 Zygonema kochii 697 Zygopichia - cheualieri 319 - cheualieri var. andersonii 319 - chiantigiana 319 - farinosa 304 - farinosa van japonica 304 - guilliermondii 319 - japonica 431 - w/50 304 - ^a^e 304 - ^a/^fl 431 - uvarum 352 - fragilis 236 - /ac//5 233 - marxiana 236 Zygosaccharomyces 118, 172, 245, 407, 424 - acidifaciens 424 - amoeboideus 429 - ashbyi 237 - ^ai/f'i 424 - barkeri 431

Index of taxa by genus and species

bisporus 319, 426 ca^e/ 234 cauarae var. amoeboideus 431 cauarae var. beauueriei 431 cheualieri 319 ciV/n 426 - czYrw5 431 - dairensis 431 - delbrueckii 404 - drosophilae 240 - eupagycus 428 - farinosus 304 - felsineus 431 fermentati 404, 427 florentinus 428 - globiformis 404 - gracilis 431 - gracilis ssp. italicus 431 - halomembranis 431 - japonicus 431 - japonicus var. 5oya 431 - /ac^/^ 233 - major 431 - mq/or var. threntensis 431 - mandshuricus 424 - marxianus 236 /«^//w 429 - mellis-acidi 429 microellipsoides 430 - mwo 431 - mongolicus 404 /iim/rii 234, 430 - nadsonii 429 - naniwaensis 424 - nectarophilus 431 - nishiwakii 424 - nukamiso 431 - nussbaumeri 429 - paradoxus 366 - pas tori 331 - perspicillatus 429 - j9mi 334 - polymorphus 431 - polymorphus f. craterica 431 - polymorphus f. stellata 429 - polymorphus f. ^/7/ca 431 - rauennatis 429 - richteri 431 WMJCii 172, 431 -

- rugosus 431 - 5a^e 424 - salsus 431 - s'ciya 431 - thermotolerans 240 - tikumaensis 304 - uariabilis 431 - uersicolor 234 - w>2/ 431 Zygosaccharomycodes paradoxus - c/zofifa^j 319 - pas tori 331 - /?/«/ 334 Zygowilliopsis 418 - californicus 413 Zygozytna 118, 433 - a m i 433 - oligophaga 434 - smithiae 434 - suomiensis 435 Zymodebaryomyces - castellii 159 - dekkeri 405 - delbrueckii 404 - disporus 388 - globosus 406 - mandshuricus All - marama 163 - ra5e/ 404 - toletanus 346 - albicans 476 - album All - aluarezsotoi 411 - brasiliense SI2 - buccalis 476 - crwz/ 563 - harteri 476 - molardi All Zymopichia - bouis 292 - fermentans 305 - pas tori 331 - quercibus 337 - rhodanensis 338 - strasburgensis 343 - i;o55// 537 - xylosa 350

366

Index to species and varietal names Recurrent use of species and variety names, as well as new combinations from taxonomic changes, result in placement of the same name with different genera. Combinations accepted by authors of the present edition are given in bold type. Page numbers to each combination are given following the genus name. aaseri - Azymocandida 476 - Candida 476 abadieae, Pichia 172, 345 abstinens - Brettanomyces 175 - Dekkera 175, 177 abuliensis, Saccharomyces 360, 362 acaciae - Pichia 282 - Yamadazyma 282 accraensis - Castellania 564 - Monilia 563 acellobiosus, Saccharomyces drosophilarum var. 234 aceris-sacchari, Saccharomyces 287 acetaethylicus, Saccharomyces 287 aceti, Saccharomyces 362 acetoabutens, Moniliella 785 acheniorum - Rhodotorula 805 - Sterigmatomyces 805 acidi-lactici - Torulopsis 526 - Torulopsis holmii var. 526 acidifaciens - Saccharomyces 424 - Zygosaccharomyces 424 acidificans, Pichia membranaefaciens var. 319 acidodevoratus - Schizosaccharomyces 393 - Schizosaccharomyces pombe var. 393 acidosaccharophillii, Saccharomyces 362 acidothermophilum, Candida 223 aclotiana - Rhodotorula 821 - Torula 821 actoni - Endomyces All - Monilia All aculeatum - Aciculoconidium 439 - Trichosporon 439, 440 acuta, Rhodotorula 805 acutus, Candida 805 adeninivoransy Arxula 441 adeninouorans, Trichosporon 441, 442 adzetii, Pichia 162 aegyptiaca - Castellania 564

- Monilia 564 aeria - Paratorulopsis lAl - Torula lAl - Torulopsis lAl aerius - Blastodendrion 814 - Cryptococcus lAl - Cryptococcus albidus var. 747 aestuarii - Kluyveromyces 229 - Saccharomyces 229 - Zygofabospora 229 africana - Ascoidea 137 - Castellania 223 - Kloeckera 219, 580 africanus - Kluyveromyces 230 - Pseudosaccharomyces 219 aganobii, Pichia 321 agaves, Metschnikowia 257 aggregatus - Cryptococcus 538 - Dipodascus 182 agrestis, Candida 390 ahearnii, Saturnispora 387 akitaensis, Pichia nakazawae var. 327 akoensis, Schizosaccharomyces formosensis var. 393 alactosa, Torula 364 alba - Bullera 641, 732 - Castellania A16 - Monilia A16 - Monilia metalondinensis var. 477 - Torulopsis 664 albasitensis, Saccharomyces All albescens, Tilletiopsis 848 -

Candida 152, 255, 476 Dermatium A16 Endomyces A16 Endomycopsis A16 Monilia 476 Myceloblastanon 476 Mycotorula A16 Oidium 476 Parasaccharomyces A16 Procandida 476 Saccharomyces 476 Syringospora A16 1035

- Zymonema

476

- 7brw/a 748 - Torulopsis 748 albidosimilis, Cryptococcus 747 albidus - Cephaloascus 143 - Cryptococcus 748 - Dipodascus 183 - Sporobolomyces 757 albomarginata - Candida 525 - Pseudomonilia 525 alborubescens - Sporobolomyces 821, 830 - Sporobolomyces photographus var. 821 album, Zymonema All albus - Bulleromyces 641, 711 - Parendomyces A16 - Sporobolomyces 641 - Sporobolomyces ruberrimus var, 836 - Sporobolomyces salmoneus var. 836 - Sporobolomyces salmonicolor var. 836 - Torulopsis 664 alcoholophila - Pichia 319 - Saccharomyces carlsbergensis var. 362 alcolica, Hansenula 488 alcomigas, Candida 488 a/Jo/ - Candida All - Monilia All - Mycotoruloides All alluvius, Schwanniomyces 165 - Hansenula 282 - Pic/iifl 282

a

- Candida mortifera var. 237 - Tbrw/a n/Z?ra var. 814 alpina - Rhodotorula 748 - 7brw/a 748 alpinus, Microanthomyces 308 alvarezsotoi - Monilia All - Mycotorula All - Zymonema All amapae, Candida 479 ambrosiae - Ambrosiozyma 129

1036

Index to species and varietal names

ambrosiae (contd) - Dipodascus 184 - Hormoascus 129 - Pichia 129, 133 americana - Candida bimundalis var. 283 - Hansenula 283 - Hansenula bimundalis var. 283 - Lalaria 582 - Pichia 283 - Torulopsis minuta var. 814 amethionina - Pichia 284 - Pichia amethionina var. 284 amidevorans, Candida 308 amoeboideus - Zygosaccharomyces 429 - Zygosaccharomyces cauarae var. 431 amurcae - Saccharomyces All - Torulaspora 427 amycelicum, Geotrichum 869 amylofaciens, Hansenula 748 amylolenta, Candida 749 amylolentus, Cryptococcus 749 amylophila, Pichia 285 anacardiicola, Auriculoscypha 618 anamensis, Saccharomyces 361 anatomiae - Candida 479 - Torulopsis 479 ancudensis, Candida 480 andersonii, Zygopichia chevalieri var. aneurinolyticum, Trichosporon 872 anglicum, Sporotrichum 293 angophorae, Pichia 286 - Hansenula 286 - Pic/iifl 152, 286 annulata, Candida mycoderma var. annulatus, Saccharomyces 361 anomala - Babjevia 141, 253 - Candida 162 - Dekkera 174 - Hansenula 287 - Pic/iia 287 - Tilletiaria 703 - Torulopsis 567 - f^7//« 287 - Brettanomyces 174, 177, 451, 877 - Endomyces 287 - Lipomyces 141, 142 - Saccharomyces 287 - Candida 791 - Pseudozyma 791 - Vanrija 791 antarcticum, Leucosporidium - Cryptococcus 749 - Sporobolomyces 791 antillancae, Candida 481

671

319

328

antillarum - Hanseniaspora 215 - Kloeckera 215 - Pseudosaccharomyces 215 antillensis, Pichia 288 aphidis - Pseudozyma 792 - Sterigmatomyces 792 apicola - Candida 481 - Torulopsis 481 apiculata - Hanseniaspora 217 - Kloeckera 217, 219, 580 apiculatus - Pseudosaccharomyces 217 - Saccharomyces 217 - Candida 482 - Kloeckera 215, 581 - Kloeckera apiculata var. 215 - Paratorulopsis 482 - Torulopsis 482 apobasidialis, Chionosphaera 644 appendiculare, Trichosporon 308 apuliensis, Hanseniaspora 215 - Candida 750 - Vanrija 750 aquaticus, Cryptococcus 750 aquatile, Trichosporon 856 arabinosa, Candida obtusa var. 151, 325 arabitolgenes, Hansenula 344 arachnophila, Filobasidiella 662 araucariae, Rhodotorula 806 arbuscula, Blastobotrys 444 arenicola, Trichosporon 329 - Monilia 564 - Mycotoruloides 564 aristata, Blastobotrys 444 - 5M//^ra 732 - Rhodotorula 806 - Torulopsis dattila var. 748 armeniaca-cornusmas, Candida 293 armeniensis, Torulopsis dattila var. 748 armenti, Torulopsis 162 armillariae - Dipodascus 184 - Geotrichum 184 arnaudii, Torulopsis 499 artagaueytiae, Debaryomyces 172 arjc/i, Zygozyma 433 - Blastodendrion 308 - Mo«///a 308 asahii, Trichosporon 857 asgardensis, Cryptococcus 765 - Crebrothecium 201 - Eremothecium 201 - Zygosaccharomyces 237 ashfordi - Monilia 476

- Myceloblastanon 476 - Parasaccharomyces 476 asiatica, Ascoidea 140 asocialis, Cryptococcus uishniacii var. asporus, Schizosaccharomyces 393

765

- Geotrichoides 858 - Geotrichum 210, 858 - Mo«///a 210, 858 - Mycoderma 210, 858 - Oidium 210 - Parendomyces 858 - Proteomyces 858 - Trichosporon 858 astigiensis, Saccharomyces All ater - Cryptococcus 750 - Cryptococcus laurentii var. magnus f. 750 atlantica, Candida 483 atlanticum, Trichosporon 483 atmosphaerica, Candida 483 atypicus, Saccharomyces chevalieri var. 237 aurantia - Torulopsis 821 - Tremella 111 aurantiaca - Bullera 733 - Chromotorula 807 - Rhodotorula 807 - Rhodotorula glutinis var. 807 - Tbrw/fl 807 - Torulopsis 807 - Chromotorula 759 - Rhodotorula 759 - 7brw/« 759 auriculariae - Candida 807 - Rhodotorula 807 - Torulopsis 807 auringiensis, Candida 484 australiensis - Dipodascus 185 - Trichosporonoides Sll australis - Candida 547 - Metschnikowia 258 - Metschnikowia bicuspidata var. austriaca, Kloeckera 111 austriacus, Pseudosaccharomyces austromarina - Candida 484 - Torulopsis 484 awamori, Saccharomyces 361 - Candida 485 - Torulopsis 485

babjevae, Rhodosporidium bacangense, Trichosporon bacarum - Candida 808 - Rhodotorula 808 - Torulopsis 808

679 871

258 111

Index to species and varietal names bacillaris - Cryptococcus 559 - Saccharomyces 559 - Torulopsis 559 bacillispora - Filobasidiella 657 - Filobasidiella neoformans var. bacillisporus - Cryptococcus 657 - Kluyveromyces 230 bailii - Saccharomyces 424 - Zygosaccharomyces 424 balcanica - Castellania 223 - Monilia 476 baldrensis, Cryptococcus 765 balearica, Endomycopsis 338

berthetii, Candida

657

- Candida 872 - Geotrichoides 872 - MonZ/ia 872 - Parendomyces 872 - Proteomyces 872 - Saccharomyces 872 - Trichosporium 872 - Trichosporon 872 banheggii, Paratorulopsis 162 barkeri - Pichia 289 - Zygosaccharomyces 431 barnettii, Saccharomyces 359 batatae, Saccharomyces 361 bayanus, Saccharomyces 360 beauueriei, Zygosaccharomyces cauarae var. 431 beckii, Hansenula 291 beechii, Candida 485 beemeri, Trichosporon 864 behrendii - Fermentotrichon 293 - Trichosporon 293 beigeliana, Zooglea 869 beigelii - Chlamydatomus 869 - Hyalococcus 869 - Micrococcus 869 - Pleurococcus 869 - Trichosporon 869 beijerinckii - Hansenula 416 - Williopsis 416 beijingense, Trichosporon 871 beijingensis, Candida 174 Z)e/g/ca - Endomyces 319 - Hansenula 319 - P/c/i/a 319 - Pichia membranaefaciens var. 319 - f^7/w 319 belgicus, Saccharomyces anomalus var. 319 benedictae, Torulaspora 405 benhamii, Candida 564 bertae, Candida 486

487

- Pic/iia 290 - Yamadazyma 290 bethaliensis - Candida All - Monilia All - Myceloblastanon All beticus, Saccharomyces 362 betulinus, Prototheca moriformis var. 884 beverwijkii, Candida 287 bhutanensis, Cryptococcus 751 bicuspidata - Metschnikowia 259 - Metschnikowia bicuspidata var. 259 - Metschnikowiella 259 - Monospora 259 - Monosporella 259 biliaria, Candida All bimundalis - Candida bimundalis var. 291 - Hansenula 291 - Pic/iifl 291 - Rhodotorula 821 - Torulopsis 821 - Endomyces 131 - Endomycopsis 291 - Hansenula 287 - P/c/iifl 291, 384 - Saenkia 372 - fF////fl 287 bisporidii - Cystofilobasidium 646 - Rhodosporidium 646 - Endomyces 131, 291 - Saccharomyces 426 - Saccharomyces ouiformis var. 362 - Saccharomycodes 372 - Saccharomycodes ludwigii var. 372 - Zygosaccharomyces 319, 426 blanchardi, Saccharomyces 656 blankii, Candida 487 blattae, Kluyveromyces 231 bogoriensis - Candida 808 - Rhodotorula 808 - ^ « n y « 808 boidinii, Candida 488 boleticola - Candida 489 - Sporobolomyces 836 bombi, Candida 489 bombicola - Candida 490 - Torulopsis 490 bondarzewiae, Candida 481 bonordenii - Candida 563 - Monilia 563 bordetii, Mycoderma 223 borealis, Phialoascus 200 boulardii, Saccharomyces 362

1037 bouina - Candida 134, 135 - Torulopsis 134 bovis - Pichia 292 - Zymopichia 292 brachytonum, Microsporum brasiliense - Geotrichum 872 - Myceloblastanon 872 - Mycoderma SI2 - Oidium 872 - Trichosporon 872 - Zymonema 872 brasiliensis - Candida 872 - Coccidioides 872 - Mo«//ia 872 - Paracoccidioides 872 - Saccharomyces 361 - Tremella 111 brassicae - Candida 223 - Trichosporon 859 braulti - Blastodendrion 111 - Enantiothamnus 223 breuis, Kloeckera 217

863

- Atelosaccharomyces 656 - Cryptococcus 656 - Saccharomyces 656 - Torulopsis 656 bronchiale, Myceloblastanon 563 bronchialis - Candida 563 - Castellania 563 - Cryptococcus 814 - Endomyces 563 - Monilia 563 - Rhodotorula 814 - Torulopsis 814 brumptii - Blastodendrion 494 - Candida 494 - Mycotorula 494 bruxellensis - Brettanomyces 175, 451 - Dekkera 175 bubodii, Endomycopsis 311 buccalis - Monilia 476 - Saccharomyces 476 - Zymonema 476

buffonii - Candida 809 - Paratorulopsis 809 - Rhodotorula 809 - Torulopsis 809 buinensis, Candida 491 bulgaricus - Kluyveromyces 236 - Kluyveromyces marxianus var. 236 - Saccharomyces fragilis var. 236 burgeffiana, Torulopsis 264

Index to species and varietal names

1038 burgessi - Castellania 563 - Endomyces 563 - Monilia 563 burtonii - Endomycopsis 293 - Hyphopichia 293 - Pichia 293, 384 busse-buschki, Atelosaccharomyces butantanensis - Candida All - Monilia All - Parendomyces All butyri, Candida 491

656

cacaoi, Candida 304 cacaoicola, Kloeckera 216 cactophila, Pichia 294 caerulescens, Lalaria 582 californica - Hansenula 413 - Metschnikowia bicuspidata var. 259 - Pichia 352 - Williopsis 413 - Zygohansenula 413 californicus - Cryptococcus 319 - Torulopsis 319 - Zygowilliopsis 413 calliphorae - Pichia 319 - Pichia membranaefaciens var, 319 cambresieri - Torulopsis 404 - Torulopsis stellata var. 404 canadensis - Azymohansenula 295 - Hansenula 295 - Pic/iia 295 - Mon///a 476, 563 - Torula 161, 546 - Torulopsis 161, 546 candidum - Acrosporium 210 - Cryptococcus 546 - Geotrichum 210, 575 - Myceloblastanon 563 candidus - Cryptococcus 161 - Parasaccharomyces 563 - Blastodendrion 572 - Pityrosporum 782 cantarellii - Candida 492 - Debaryomyces 166 - P/c/z/a 166 - Torulopsis 492 capensis, Saccharomyces 362 capitatum - Ascotrichosporon 186 - Cystofilobasidium 648 - Geotrichum 186, 575

- Rhodosporidium 648 - Trichosporon 186 capitatus - Blastoschizomyces 186 - Dipodascus 186 capitulata, Blastobotrys 445 capsularis - Endomyces 375 - Endomycopsis 375 - Prosaccharomyces 375 - Saccharomycopsis 375 - Williopsis 375 capsulata - Hansenula 296 - Kuraishia 296 - P/c/iifl 296 capsuligena - Candida 664 - Torulopsis 664 capsuligenum - Filobasidium 664 - Leucosporidium 664 capsuligenus, Torulopsis 664 carbajali, Saccharomyces 362

- Schwanniomyces 165 - Torulaspora 159 - Torulopsis 493 - Zymodebaryomyces 159 ca5ft7/a^ - Pfc/i/« 298 - Yamadazyma 298 castrensis, Candida 493 catenata, Sporothrix 400 catenulata, Candida 494 cavensis, Debaryomyces 164 caoernicola, Saccharomyces 236 cellobiosa, Pichia 321 cellobiovorus, Kluyveromyces 247 cellulolytica, Candida 573 cephalocereana, Pichia kluyveri var. - Lalaria 582 - Saccharomyces 361 cereana, Sporopachydermia 395 cereanus, Cryptococcus 395 cerebriforme - Monilia ISl - Trichosporon 872 cerebriformis, Oospora SI2 cerebriloculosis, Cryptococcus 656

- Blastodendrion 821 - Rhodotorula mucilaginosa var. 821 - Torulopsis mucilaginosa var. 821 caribaea, Pichia 297 cariosilignicola, Candida 321 carlsbergensis - Saccharomyces 367 - Saccharomyces uvarum var. 362 carmosousae, Saccharomyces 148 carnea, Lalaria 582 carnescens, Torulopsis 759 carnicolor, Sporobolomyces 695 caroliniana, Torulopsis 519 carougeaui, Sporotrichum 293 carpophila - Candida guilliermondii var. 308 - Torulopsis 308 - Debaryomyces 158 - P/cA/a 158, 172 - Torulaspora 158 cartilaginosus - Saccharomyces cartilaginosus var. - Saccharomyces vini var. 362 - Saccharomyces mangini var. - Zygosaccharomyces 234 caseinolytica, Candida 492 castellanii - Candida 223 - Castellania 264 - Cryptococcus 264 - Monilia 26A - Torulopsis 264 castellii - Candida 493 - Debaryomyces 159 - Debaryozyma 159 - P/c/?/a 159 - Saccharomyces 360

361

316

- Mycoderma 569 - Mycokluyueria 569 - Saccharomyces 152, 244, 361, 410 - Saccharomyces vini var. 362 cesarii, Debaryomyces matruchoti var. 161 chambardi - Petasospora 298 - Saccharomyces 298 chambardii, Pichia 298 chapmanii, Geotrichum matalense var. 211 chathamia, Metschnikowia bicuspidata var. 259 - Saccharomyces 361 - Saccharomyces oviformis var.

362

361

- Candida 223 - Mycoderma 223 - Saccharomyces 361 - Zygopichia 319 - Zygosaccharomyces 319 chiantigiana, Zygopichia 319 chilensis, Candida 495 chiloense, Schizoblastosporion 602 chiloensis, Candida bertae var. 486 chiropterorum, Candida 495 chlamydospora, Candida bimundalis var. chlorelloides, Prototheca 886 -

Candida 293 Cladosporium 293 Dematium 293 Endomyces 319 Endomycopsis 293 Pzc/zw 319 Saccharomyces 361 Pr////a 319 Zygowillia 319

564

Index to species and varietal names cicatricosa - Ambrosiozyma 130 - Pichia 130, 133 cicerisporus, Kluyveromyces 236 cidri - Brettanomyces 174 - Sacchawmyces 426 - Torulaspora 426 - Zygosaccharomyces 426 ciferrii - Candida 400 - Endomycopsis 299 - Hansenula 299 - Hansenula anomala var. 299 - Pichia 299 - Prototheca 886 - Prototheca portoricensis var. 887 - Stephanoascus 400 ciliata, Bensingtonia 124 cinnabarina - Torula 836 - Tremella 713 cisnerosi, Mycotorula 821 citelliana, Mycocandida pinoysimilis var. citrea, Candida 326 citri-aurantii - Galactomyces 209 - Geotrichum 209, 575 - Geotrichum candidum var. 209 - OiV/jwm 209 - Oospora 209 citrica, Candida 564 - Torulopsis 502 - Zygosaccharomyces 431 cladosporoides, Botryoascus 2)11 claussenii - Brettanomyces 174 - Candida All - Dekkera 174, 177 - Syringospora 477 clavatum, Geotrichum 575 cloacae, Candida 522 coalescens, Tremella 713 coccinea, Lalaria 583 coipomoensis, Candida 496 colardi, Parasaccharomyces All colliculosa - Candida 404 - Eutorula 404 - 7brw/« 404 - Torulopsis 404 colliculosus, Cryptococcus 404 - Mycotorula 807 - Rhodotorula 807 communis, Lalaria 583 commutata, Nadsonia 268 complicata, Saitoella 600 confusa, Lalaria 583 conglobata - Candida 496 - Torulopsis 496 conglobatus, Cryptococcus 496 consortioniSf Cryptococcus 751

1039

copellii - Castellania All - Cryptococcus All - Myceloblastanon All - Torulopsis All coprophila, Hansenula 416 coprophilus - Sporidiobolus ruineniae var. 696 - Sporobolomyces 696 coralliformis, Sporobolomyces 697

237

- Rhodotorula rubra var. - Vanrija 752

- Apiotrichum 752 - Trichosporon cutaneum var. 872 curvatus, Cryptococcus 752 custersiana, Dekkera 451 custersianus - Brettanomyces 111, 451 - Dey^y^era 177, 453 custersii, Brettanomyces 175, 177

- Rhodotorula 821 - 7brw/a 821 - Torulopsis 821 corallinus, Cryptococcus 821 cordubensis, Saccharomyces 362 coreanus, Saccharomyces 361 coremiiforme, Trichosporon 859 coremiiformis, Hemispora 859 cornealis - Monilia 420 - Proteomyces 420 corniformis, Holtermannia 111 corticis - Kloeckera 216, 581 - Pseudosaccharomyces 216 cortinarii, Endomyces 194

- Mo«?7/a 477, 860 - Syringospora All cutaneum - Basidiotrichosporon 860 - Blastodendrion All - Geotrichum 860 - Myceloblastanon All - Mycelorrhizodes All - Mycoderma 860 - OzJmm 860 - Trichosporon 860 - Geotrichoides 860 - Proteomyces 860 cylindracea, Candida 497 cylindrica - Candida pelliculosa var. 287 - Torulopsis \1A cymbalariae, Eremothecium 204

- Eremothecium 202 - Nematospora 202, 207 corymbosa, Ascoidea 137 - Cryptococcus 656 - Torulopsis 656 coudertii - Debaryomyces 160 - Debaryozyma 160 - P/cA/a 160 - Torulaspora 160 - Endomycopsella 376 - Saccharomycopsis 376 craterica, Zygosaccharomyces polymorphus 431 - Saccharomyces 361 - Saccharomyces cerevisiae var. cremea, Tilletiopsis 852 cremoris, Torula 237 cresolica, Rhodotorula 827 crieana, Prototheca 887 - 5M//^m 733 - Rhodotorula 807 crossotarsi, Pichia 131 cruceatus, Nectaromyces 260 crwz/ - Endomyces 563 - Zymonema 563 curiosa, Candida 676 curiosus, Cryptococcus 676 - Azymocandida 752 - Candida 752 - Candida heveanensis var.

752

820

361

f.

dacryoides, Sakaguchia 680 dacryoideum, Rhodosporidium 680 dairenensis - Rhodotorula glutinis var. 814 - Saccharomyces 363 dairensis, Zygosaccharomyces 431 dattila - Candida 240 - Mycotorula 240 - Tbrw/a 240 - Torulopsis 240 dattilus, Cryptococcus 240 dearnessii, Lalaria 583 decipiens - Endomyces 194, 384 - Geotrichum 184, 576 - Hypomyces 184 decolans, Torula 821 decolorans - Castellania 476 - Monilia 476 - Myceloblastanon 476 - Mycoderma 319 - Mycokluyveria 319 deformans - Candida 420 - Candida lipolytica var. 420 - Lalaria 583 - Pseudomonilia 420 - Debaryomyces 405 - Zymodebaryomyces 405

1040 delbrueckii - Debaryomyces 404 - Saccharomyces 404 - Torulaspora 152, 404 - Zygosaccharomyces 404 - Zymodebaryomyces 404 delftensis, Pichia 299 delphensis - Dekkeromyces 232 - Guilliermondella 232 - Kluyveromyces 232 - Saccharomyces 232 - Zygofabospora 232 dematia, Torula 1^1 dendrica - Candida 497 - Torulopsis 497 dendritica, Candida 223 dendriticum, Trichosporon 223 dendronema, Candida 498 dendrophila, Bullera 733 dendrophilum, Aessosporon 733 dendrorhous - Rhodomyces 718 - Xanthophyllomyces 718 depauperata, Filobasidiella 662 derossii, Pichia 319
Index to species and varietal names - Kluyveromyces 233 - Kluyveromyces marxianus var. 233 - Saccharomyces 233 - Zygofabospora 233 dombrowskii - Pichia 305 - Saccharomyces 305 domercqiae - Candida 411 - Torulopsis 411 - Wickerhamiella 411, 421 domercqii, Torulopsis 411 domesticum, Trichosporon SI2 domingensis, Kloeckera 216 domschii, Protendomycopsis 861 douglasii, Saccharomyces 366 drimydis, Candida 500 drosophilae, Zygosaccharomyces 240 drosophilarum - Dekkeromyces 234 - Guilliermondella 234 - Kluyveromyces 234 - Kluyveromyces lactis var. 234 - Kluyveromyces marxianus var. 234 - Saccharomyces 234 - Zygofabospora 234 dryadoides - Hansenula 301 - Pic/iia 301 dubia - Eutorulopsis 821 - Pic/z/a 572 dublinensis, Brettanomyces 174 dubliniensis, Candida 479, 573 dulciaminis - Candida 805 - Rhodotorula 805 dulcita, Oospora 861 dulcitum - Geotrichum 861 - Trichosporon 861 ^i/flx, Candida

402, 500

- Blastobotrys 446 - Candida rugosa var. 546 - Filobasidium 665 - Saccharomyces AlA elinovii, Cryptococcus 764 ellipsoideus - Saccharomyces 361 - Saccharomyces cerevisiae var. 361 ellipsoidospora, Hansenula 352 elongasporus, Saccharomyces 254, 255 elongata - Guilliermondia 269 - Nadsonia fulvescens var. 269, 373 elongatus - Saccharomyces 361 - Sporobolomyces 830 elongisporus - Lodderomyces 254 - Saccharomyces 254 elviae, Sterigmatomyces 844 emphysematosus, Debaryomyces 161

encephaluy Tremella 714 energica, Endomycopsis fibuligera var. enokii, Torulopsis 488

338

- Candida 563 - Castellania 563 - Monilia 563 entericum, Myceloblastanon 563 entericus, Endomyces 563 entomaea, Candida 322 entomophila, Candida 500 epidermica, Castellania 536 epidermicum, Blastodendrion intestinale var. 536 equinum, Trichosporon 872 erectum, Blastodendrion All eremophila - Candida 316 - Pichia kluyveri var. 316 ergastensis, Candida 501 - Candida 501 - Torulopsis 501 eryobotryae, Saccharomyces 361 etchellsii - Candida 502 - Debaryomyces 160 - Pzc/i/fl 160, 172 - Torulaspora 160 - Torulopsis 502 ethanolica, Candida 503 ethanolitolerans, Torulopsis 503 ethanophila, Candida intermedia var. ethanothermophilum, Candida 223 eucryphiae, Apiotrichum 673 eupagyca, Torulaspora 428 - Saccharomyces 428 - Zygosaccharomyces 428 euphorbiae - Candida 301 - Pic/iia 301 euphorbiaphila - Candida 302 - Hansenula 302 euphorbiiphila - Candida 302 - Hansenula 302 - Pic/iiVi 302 - Issatchenkia scutulata var. 224 - Pichia scutulata var. 224 exiguus, Saccharomyces 364 exuberans, Oospora lactis var. 211

fabianii - Candida 303 - Hansenula 303 - P/c/iifl 303 - Debaryomyces 162 - Debaryomyces hansenii var. faecalCy Trichosporon 862 faecalis - Castellania 563

162

516

1041

Index to species and varietal names - Endomyces 476 - Endomycopsis mali var. 862 - Kloeckera 160 - Monilia 563 - Myceloblastanon 563 - Pichia 160 falcatus, Sporobolomyces 831 famata - Candida 161, 503 - Candida famata var. 161, 503 - Mycotorula 161 - Torulopsis 161 famatum, Geotrichum 161 farinosa - Pichia 304 - Yamadazyma 304 - Zygopichia 304 farinosus - Blastobotrys 401 - Saccharomyces 304 - Stephanoascus 401 - Zygosaccharomyces 304 farlowii, Lalaria 583 fasciculata - Endomycopsis 131 -Pichia 131 - Blastodendrion All - Candida 411 - Cryptococcus All - Myceloblastanon All fellii, Leucosporidium 671 felsineus, Zygosaccharomyces 431 fennica, Candida 503 fennicum, Trichosporon 503 feraegula, Cryptococcus 753 fermentans - Arthroascus 311 - Cladosporium 293 - Fermentotrichon 576 - Geotrichum 576 - P/cAifl 305 - Pichia amethionina var. 297 - Pichia chodati var. 319 - Saccharomycopsis 377 - Trichosporon 576 - Zymopichia 305 fermentati - Saccharomyces 404 - Torw/a 308 - Torulaspora 404 - Zygosaccharomyces 404, 427 fermenticarens, Candida 504 ferulica, Rhodotorula 810 festinans - Saccharomyces 361 - Saccharomyces cerevisiae var. 361 fibrae, Candida 293

fibuliger - Endomyces 311 - Endomycopsis 377 - P/c/i/a 377 fibuligera, Saccharomycopsis fici, Geotrichum 511

311

figueirae, Trichosporon 857 filamenta - Fissuricella 858 - Prototheca 858 filiforme, Torulopsis inconspicua var. 514 fimetaria - Candida 305 - Platygloea 618 finlandica, Pichia 305 fioccoi, Monilia All fischerii, Sporobolomyces salmonicolor var. 697 flareri - Blastodendrion 162 - Candida 162 - Candida famata var. 162, 503 - Parendomyces 162 - Chromotorula 754 - Rhodotorula 754 - Rhodotorula tokyoensis var. 754 - Tilletiopsis 849 - Tilletiopsis minor var. 849 - Torw/a 754 flavescens - Cryptococcus 759 - Cryptococcus laurentii var. 759 - Tbrw/a 759 - Torulopsis 759 flavorubra, Lalaria 583 flavus, Cryptococcus 754 flocculosa - Pseudozyma 792 - Sporothrix 792 flocculosus, Stephanoascus 403, 792 florentina, Torulaspora 428 florentinus - Saccharomyces 428 - Zygosaccharomyces 428 florenzani, Saccharomyces 405 floricola, Candida 505 floriforme, Filobasidium 666 fluorescens - Kloeckera 409 - Wickerhamia 409 fluviale, Rhodosporidium 683 fluviatilis, Candida 505 fluxorum, Debaryomyces 306 - Debaryomyces 306 - Pic/iia 306 foliacea, Tremella 714 foliarum, Candida 811 foliicola, Sporobolomyces 831 foliorum, Rhodotorula 811 formicaria, Torulaspora 170 formicarius, Debaryomyces 170 formosensis - Saccharomyces 361 - Schizosaccharomyces 393 - Rhodotorula 811 - Torulopsis 811 fragariorum, Candida

811

yragz, Candida 573 fragilis - Dekkeromyces 236, 237 - Fabospora 236 - Guilliermondella 236 - Kluyveromyces 237 - Saccharomyces 236 - Zygorenospora 236 fragrans - Cephaloascus 144 - Cylindrium 577 - Endomyces lactis var. 577 - Geotrichum 511 - Oospora 577 - Saccharomyces 236 franciscae - Debaryomyces 406 - Torulaspora 406 fresenii, Saccharomyces 814 freyschussii, Candida 506 friedmannii, Cryptococcus 754 friedrichii, Candida 506 frigida - Candida 676 - Mrakia 676 - Vanrija 676 frigidum, Leucosporidium 676 fructus - Candida 507 - Torulopsis 507 fructuum - Saccharomyces 362 - Saccharomyces cerevisiae var. 362 fuciformis, Tremella 715 fujisanensis - Candida 812 - Rhodotorula 812 - Torulopsis 812 - Vanrija 812 fukushimae, Endomycopsis 413 fukuyamaensis - Candida 573 - Debaryomyces 162 fulvescens - Guilliermondia 269 - Nadsonia 269 - Nadsonia fulvescens var. 269 - Tilletiopsis 850 fungorum, Sporothrix 401 furfur - Malassezia 782 - Microsporon 782 - Pityrosporum 782 - Sporotrichum 782 - Oosporidium 869 - Trichosporon 869 fuscescens, Cryptococcus fusiformata - Candida 793 - Pseudozyma 793 futronensis - Apiotrichum 813 - Rhodotorula 813

754

1042

Index to species and varietal names

fuzhouensis - Fellomyces 769 - Sterigmatomyces 769

globosum - Blastodendrion 536 - Schizoblastosporion 536 g/oZ705W5

gaditensis, Saccharomyces 362 galacta - Candida 507 - Torulopsis apis var. 507 galeiformis, Pichia 307 gallica, Mycoderma 569 gallicum, Geotrichum rotundatum var. 872 gallicus, Cryptococcus hungaricus var. 761 gastricus, Cryptococcus 755 gattii, Cryptococcus neoformans var. 657 gelatinosa - Rhodotorula 748 - Torula 748 gelida - Candida 676 - Mrakia 676 - Vanrija 676 gelidum, Leucosporidium 676 geniculatus, Dipodascus 187 - Candida All - Cryptococcus 748 geochares - Candida 508 - Torulopsis 508 geophila, Myxozyma 593 - Botrytis 210 - Torw/a 210 geotrichum - Dipodascus 210 - Endomyces 210 - Galactomyces 210 - Kloeckera 217 - Mycotorula 821 germanicus, Pseudosaccharomyces gifuense - Blastodendrion 411 - Myceloblastanon 411 gigas - Blastobotrys 401, 446 - Oospora 577 gilvescens, Cryptococcus 756

217

- CflAirfiV/fl 152, 508 - Torulopsis 508 glabratus, Cryptococcus 508 glaebosa, Candida 509 globiformis, Zygosaccharomyces 404 globispora - ^M//era 734 - Tremella 715 globisporum, Filobasidium 667 -

Candida 146 Naganishia 748 Torw/fl 146 Torulaspora 406 Torulopsis 146

- Debaryomyces 406 - Saccharomyces 360 - Zymodebaryomyces 406 gloeosporus, Dicellomyces 615 glucosophila, Candida 510 - Hansenula 307 - Ogataea 307 - P/c/iifl 307 glutinis - Cryptococcus 814 - Rhodotorula 601, 814 - Rhodotorula glutinis var. 814 - Saccharomyces 814, 820 - Torw/a 814 - Torulopsis 814 - ^5/?^/« 204 - ^5;?Z>);a 204, 207 - Eremothecium 204 - Nematospora 204 - Spermophthora 201 gracile - Blastodendrion 536 - Geotrichum 862 - O/V/mw 862 - Oospora 862 - Schizoblastosporion 536 - Trichosporon 862 gracilis - Rhodotorula • 690 - Sporobolomyces 832 - Zygosaccharomyces 431 gramineum, Exobasidiellum 615 graminis - Candida 816 - Rhodotorula 815 grandispora, Bullera I'hl granulosa - Oospora %12 - Torulopsis acris var. 748 granulosum, Trichosporon 872 gravidus, Protomyces 354 grinbergsii, Rhodotorula 821 griseoflavus, Sporobolomyces 832 gropengiesseri - Candida 510 - Cryptococcus 510 - Torw/fi! 510 - Torulopsis 510 grouesii, Ascocybe 144 grubyii, Procandida 477 gruessii, Metschnikowia 260 - Debaryomyces 161 - Myceloblastanon 477 - Mycelorrhizodes 477 guilliermondii - Blastodendrion 308 - C«/irfiV/fl 152, 308, 511 - Candida guilliermondii var.

511

- Castellania 308 - Debaryomyces 161 - Endomyces 308 - Endomycopsis 308 - Hanseniaspora 215 - Mo«///fir 308 - Myceloblastanon 308 - Mycotorula 308 - Pic/iifl 308 - Yamadazyma 308 - Zygopichia 319 guttulatus - Atelosaccharomyces 154 - Cryptococcus 154 - Cyniclomyces 154 - Saccharomyces 154 - Saccharomycopsis 154

haemulonii - Candida 511 - Torulopsis 511 halomembranis - Saccharomyces acidifaciens var. - Saccharomyces rouxii var. 431 - Zygosaccharomyces 431 halonitratophila - Candida 502 - Torulopsis 502 halophila, Candida 567 halophilus - Sterigmatomyces 351 - Torulopsis 567 halotolerans, Debaryomyces 304 hampshirensis, Pichia 309 hangzhouana, Pichia 422, 423 hansenii - Debaryomyces - Debaryomyces - Debaryomyces - Debaryozyma - P/cA/a 161 - Saccharomyces - Torulaspora haplophila - Pichia 310 - Yamadazyma

431

161 hansenii var. 161 tyrocola var. 161 161 161 161

310

- Cryptococcus 476 - Monilia 476 - Parasaccharomyces 476 - Torulopsis 476 - Zymonema 476 /zfl5'egawae - Erythrobasidium 654 - Rhodotorula 654 - Syringospora 477 hasegawianum, Erythrobasidium 654 hawaiiensis, Metschnikowia 261 heedii, Pichia 310 heimii, Pichia 311 hellenica, Candida 422 hellenicum, Trichosporon 422 hellenicus, Zygoascus 411 hempflingii, Cryptococcus 765

Index to species and varietal names henricii - Hansenula 311 - Ogataea 311 - Pichia 311 heterogenicus, Saccharomyces 360 hetewmorpha, Hansenula anomala var. heveanensis - Candida 756 - Cryptococcus 756 - Cryptococcus magnus var. 756 - Torula 756 - Torulopsis 756 hienipiensis, Saccharomyces 362 hildegaardi, Debaryomyces 161 himalayensis, Cryptococcus 764 hinnulea, Rhodotorula 816 hinnuleus, Cryptococcus 816 hinoensis, Candida 223 hirtum, Geotrichum 872 hispalensis, Saccharomyces 362 hispanica, Saccharomyces 362 hispanicus

huempii - Candida 757 - Cryptococcus 151 humahuaquensis, Trichosporon humboldtii, Pichia 172, 188

- 7brw/« 656 - Torulopsis 656 hokkai, Candida parapsilosis var. 524 hollandicus, Debaryomyces membranaefaciens var. 161 - Candida 364 - Cryptococcus 364 - Torw/a 364 - Torulopsis 364 holsaticus - Prosporobolomyces 694 - Sporobolomyces 694 - Hansenula 312 - Nakazawaea 312 - P/c/fifl 312 homilentoma, Candida

- Endomyces ?>11 - Endomycopsis fibuliger var. - Saccharomycopsis 317 horovitziae, Fellomyces 769 hortai, Trichosporon 872 - Atelosaccharomyces 161 - Debaryomyces 161 - Debaryomyces kloeckeri var.

377

161

872

- O/fifmm 210 - Oospora 210 humicola - Apiotrichum 757 - Azymoprocandida 757 - Candida 757 - Mycotorula 757 - rorw/« 757 - Vanrija 757 humicolus, Cryptococcus 757 humilis - Candida 513 - Torulopsis 513 hungarica, Dioszegia 758 hungaricuSy Cryptococcus 758 hutensis, Saccharomyces 362 hyalospora, Pichia 319 hyalosporus, Saccharomyces 319 hydrocarbofumarica, Candida 487 hydrocarbonea

-

656

-

Geotrichum 857 Mycoderma 857 Proteomyces 857 Sporotrichum 857

Candida 817 Rhodotorula 817 Torulopsis 817 Vanrija 817

i/f^i/i

- Prototheca 886 - Prototheca zopfii var. 886 hylecoeti, Ascoidea 138 hylophila - Candida 817 - Rhodotorula 817 hyphaenes, Agaricostilbum 639

- Pseudosaccharomyces 215 - Sterigmatomyces 351, 845 - Sterigmatomyces halophilus var. inexorabilis - Monilia All - Syringospora All inexpectata - Monilia 223 - Mycocandida 223 - Pseudomonilia 223

650

- Candida 188 - Dipodascus 188, 602 - Geotrichum 188, 578 ingoldiiy Bensingtonia 724

iberica, Candida 572 ///c/5, Saccharomyces 361 imperatae, Kockovaella 111 incommuniSf Candida 513 inconspicua - Candida 514 - Torulaspora 405 - Torulopsis 514 inconspicuu/Hf Fibulobasidium 710 inconspicuus, Saccharomyces 405 indecoratUf Tremella 716 indica - Kloeckera 215 - P/c/z/a 319 - Pseudohansenula 319

512

- Atelosaccharomyces 656 - Cryptococcus 656 - Debaryomyces 656 - Saccharomyces 656 - Schwanniomyces 405 - Torulopsis 656 honduriana, Torulopsis hominis var. hondurianus - Cryptococcus 656 - Cryptococcus hominis var. 656 hordea, Rhodotorula 816

- Trichosporon 857 - Trichosporon cutaneum van 857 infirmo-miniata - Rhodotorula 650 - Rhodotorula glutinis var. 650 - Torula 650 infirmo-miniatus - Cryptococcus 650 - Rhodosporidium 650 infirmominiatum, Cystofilobasidium

287

- Prosporobolomyces 697 - Sporobolomyces 697

1043

845

- Sarcinomyces 863 - Sarcinosporon 863 - Trichosporon 863 innocuous, Cryptococcus neoformans var. 748 inositophila, Candida All inositophilus, Sporobolomyces 833 inositovora - Pichia 313 - Yamadazyma 313 inouyeif Protomyces 354 insectalens - Candida 514 - Torulopsis 514 insectamans, Candida 515 insectorum, Candida 515 insectosa, Candida shehatae var. 552 - Candida 563 - Castellania 563 - Monilia 563 insolitum, Myceloblastanon 563 insolitus, Endomyces 563 interdigitalis - Cryptococcus 16A - Mycotorula 564 - Torulopsis 264 intermedia - Bensingtonia 725 - Brettanomyces 175 - 5M//era 725 - Ca/K/iV/a 247, 516 - Candida parapsilosis var. 537 - De^ytera 175, 177 - Mycotorula 175, 516 - Saccharomyces elegans var. 424 intermedium - Blastodendrion 516 - Sirobasidium 710 intermedius - Brettanomyces 175 - Cryptococcus 516 - Saccharomyces 361 - Sporobolomyces 725

1044 intestinale, Blastodendrion All intestinalis - Candida 411 - Parasaccharomyces 411 - Selenotila 263 - Selenozyma 263 inundatus, Protomyces 354 inusitatus, Saccharomyces 360 irritans - Blastodendrion 563 - Parasaccharomyces 563 ishiwadae, Candida 516 issaui - Monilia 564 - Syringospora 564 italicus - Brettanomyces 559 - Saccharomyces 362 - Zygosaccharomyces gracilis ssp. 431 italiens, Saccharomyces cartilaginosus var. 362 jacksonii, Helicogonium 197 jadinii - Hansenula 314 - Pichia 314 - Saccharomyces 314 japonica - Azymoprocandida 664 - Candida 664 - Candida guilliermondii var. 308 - Hasegawaea 391 - Kloeckera 218, 581 - Mycotorula 564 - PicAw 315 - Pichia farinosa var. 304 - Smithiozyma 249 - Sporobolomyces 695 - Torulopsis albida var. 748 - Zygopichia 431 - Zygopichia farinosa var. 304 japonicus - Debaryomyces 164 - Lipomyces 249 - Octosporomyces 391 - Schizosaccharomyces 391 - Zygosaccharomyces 431 jauanense, Geotrichum 211 javanensis - Arthroascus 379 - Endomyces 379, 384 - Endomycopsis 379, 384 - Saccharomycopsis 379 - Schizosaccharomyces 379 - Schwanniomyces 379 javanica - Candida 1%1, 818 - Hansenula 287 - Kloeckera 215, 219, 581 - Mo«///a 287 - Rhodotorula 818 - fFz7//« 287 jauanicus, Pseudosaccharomyces 215 jensenii - Kloeckera 215

Index to species and varietal names - Pseudosaccharomyces jirovecii - Trichosporon 864 - Trichosporon cutaneum joannae, Saccharomyces johansoniiy Lalaria 583 johnsonii, Sporidiobolus

215

var. 362

864

692, 694

kamienskii, Metschnikowia

259

- Candida 517 - Torulopsis 517 kartulisi - Castellania 237 - Cryptococcus 231 kayongosi - Blastodendrion 563 - Cryptococcus 563 - Caw^zV/a 236, 237 - Cryptococcus 237 - Geotrichoides 237 - Mycotorula 237 - Saccharomyces 237 - Torulopsis 231 kentuckyi, Rhodotorula mucilaginosa var. 821

- Hansenula 315 - Myxozyma 593 - P/c/iiVi 315 - Pichia kluyveri var. 315 - Saccharomyces 365 kluyveri-nielii, Sporobolomyces kobayashii, Schizoblastosporion -

- Candida 517 - Metschnikowia 262 - Metschnikowiella 262 krugeri, Prototheca 887 kruisii - Candida 518 - Torulopsis 518 - CaAi
- Candida 308 - Torulopsis 308 klebahnii - Endomyces lactis var. 578 - Geotrichum 578 - Trichosporon 578 A:/em, Torula 656 A:/em/, Cryptococcus 656 - Debaryomyces 161 - Saccharomyces 161 kloeckerianus, Saccharomyces

- Blastodendrion 308 - Myceloblastanon 308 - Mycotorula 308

406

834 263

Candida 697 Monilia 697 Rhodomyces 697 Zygonema 697

- Ogataea 317 - Pic/iia 317 konokotinae, Debaryomyces 170 kononenkoae - Lipomyces 250 - Lipomyces kononenkoae ssp. 250 koshuensis, Candida 488 krassilnikovii - Dekkeromyces 234 - Zygofabospora 234 kratochvilovae, Rhodosporidium 684

- Bullera alba var. 739 - Dekkeromyces 233 - Endomyces 211 - Guilliermondella 233 - Kluyveromyces 152, 233 - Kluyveromyces lactis var. 233 - Kluyveromyces marxianus var. 233 - Mycoderma 234 - Mycotorula 237 - O/J/wm 210 - Oospora 210 - Oosporoidea 210 - Saccharomyces 233 - Zygofabospora 234 - Zygorenospora 233 - Zygosaccharomyces 233 lactis-condensi - Candida 519 - rorw/« 519 - Torulopsis 519 lactophilus, Sporobolomyces 834 - Candida 377 - Candida pseudotropicalis var. 237 - Mycotorula 237 - Rhodotorula 818 lactosus, Zygolipomyces 252 lactucaedebilis, Protomyces 355 laedegaardi, Debaryomyces 161 lafarii - Kloeckera 215 - Kloeckera Javanica var. 215 - Mycoderma 319 - Mycokluyveria 319

Index to species and varietal names - Pseudosaccharomyces 215 laibachii - Endomyces 865 - Trichosporon 865 lambica - Candida 305 - Candida tropicalis var. 547 - Dekkera 175, 177 - Mycoderma 305 - Mycotorula 547 - Torula 547 lambicus, Brettanomyces 175 langeroni - Candida All - Procandida All lari-marini - Cystofilobasidium 652 - Leucosporidium 652 larvae, Torulopsis 537 laryngis, Rhodotorula 820 laryngitidis - Atelosaccharomyces All - Cryptococcus All lasioboli, Cytobasidium 618 laureliae, Candida 519 laurentii - Cryptococcus 759 - Rhodotorula 759 - 7brM/« 759 - Torulopsis 759 /awn, Laurobasidium 615 /e-^m, Coccidiascus 153 lentus, Brettanomyces bruxellensis var. leopoldi, Debaryomyces 161 letifera, Lalaria 583 lignicola, Hyalodendron 713 lignophila - Candida 818 - Rhodotorula 818 lignosa, Candida shehatae var. 552 lilacina, Tilletiopsis 852 lindneri - Endomyces 2)11 - Endomycopsis fibuliger var. 377 - Kloeckera 581 - P/c/z/a 324 - Pseudosaccharomyces 581 - Saccharomyces 361 - Saccharomyces chevalieri var, 361 - Saccharomycopsis 211 linguae-pilosae - Castellania 563 - Cryptococcus 563 - Myceloblastanon 563 - Saccharomyces 563 - Torulopsis 563 /m/, Rhodotorula 760 /m^/, Geotrichum 186 lipofer - Lipomyces 251 - Waltomyces 251 lipofera - Torula 251 - Torulopsis 251 lipoferus, Cryptococcus 251

175

lipolytica - Azymoprocandida 420 - Ca/i£//Z?o/, Trichosporon 857 lodderae - Candida 570 - Fermentotrichon 570 - Kluyveromyces 235 - Saccharomyces 235 - Trichosporon 570 lodderi - Dekkeromyces 235 - Guilliermondella 235 - Kloeckera 217 - Kluyveromyces 235 - Pichia farinosa var. 319 - Saccharomyces 235 - Trichosporon 570 - Zygofabospora 235 /6>go5, Saccharomyces 361 - Hansenula anomala var. 287 - Rhodotorula rubra var. 820 longissima, Rhodotorula 690 loubieri - Geotrichum 866 - Trichosporon 866 ludwigi, Cryptococcus 821 ludwigii - Geotrichum 189, 190, 579 - Magnusiomyces 189 - OzV/mm 190 - Oospora 190 - Rhodotorula 821 - Saccharomyces 372 - Saccharomycodes 312 lunata, Metschnikowia 263 lundsgaardi, Debaryomyces 161 /w/?/, Cryptococcus 765 lusitaniae - Ca/irf/Wa 148, 151, 521 - Clavispora 148 - Rhodosporidium 685 lusitanica, Rhodotorula glutinis var. luteola - Chromotorula 160 - Rhodotorula 760

1045 - 7brw/« 760 - Torulopsis 760 luteoluSy Cryptococcus 760 lutetiae, Trichosporon 862 luxurians, Oidium lactis var. 210 lycopersici, Nematospora 202 lynferdii - Candida 317 - Hansenula 317 - P/cAia 317 lyxosophila, Candida 521

macedoniensis - Blastodendrion 237 - Candida 237 - Castellania 237 - Dekkeromyces 231 - Fabospora 237 - Monilia 237 - Myceloblastanon 237 - Mycotorula 237 - Mycotoruloides 237 - Saccharomyces 237 macedon iensoides - Castellania 237 - Monilia 237 - Cryptococcus 760 - Rhodotorula 760 macroglossiae - Blastodendrion 572 - Cryptococcus 571 - Monilia 571 - Monilia zeylanoides var. 572 - Mycocandida 571 - Parendomyces 572 - Torulopsis 571 macrospora, Monilia ISl macrosporus - Dipodascus 189 - Protomyces 355 madiday Trichosporonoides 873 madurae, Sporobolomyces roseus var. magna, Kloeckera 216 magnoliae - Candida 521 - Entelexis 521 - Torulopsis 521

814

836

- Geotrichum 577 - Sirobasidium 111 magnus - Cryptococcus 761 - Cryptococcus laurentii var. 756, 761 - Pseudosaccharomyces 216 magnusii - Dipodascus 189 - Endomyces 189 - Endyllium 189 - Magnusiomyces 189 - Oospora 190 - Debaryomyces kloeckeri var. 161 - Saccharomyces ellipsoideus var. 362

Index to species and varietal names

1046 major (contd) - Torulopsis utilis yar. 314 - Zygosaccharomyces 431 majoricensis - Candida 525 - Procandida 525 malacitensis - Saccharomyces 421 - Saccharomyces nilssoni var. 427 malaiana - Kloeckera 215 - Pseudosaccharomyces 215 malanga - Hansenula 379 - Saccharomycopsis 379 malassezii - Cryptococcus 782 - Pityrosporum 782 malideuorans - Schizosaccharomyces 393 - Schizosaccharomyces pombe var. 393 malti-juniperi, Mycoderma 210 maltosa - Candida 522 - Hansenula californica var. 413 malvinella, Kondoa 686 malvinellum, Rhodosporidium 686 mamillae, Candida 308 manchurica, Torulaspora All mandshurica - Pichia 319 - Pichia membranaefaciens var. 319 mandshuricus - Debaryomyces 427 - Saccharomyces 361 - Saccharomyces carlsbergensis var. 361 - Zygosaccharomyces 424 - Zymodebaryomyces 427 mangini, Saccharomyces 361 mannitica, Torulopsis 821 mannitofaciens - Candida 567 - Torulopsis 567 mannitofermentans - Castellania 411 - Monilia 477 - Pichia 163 - Zymodebaryomyces 163 maramus, Debaryomyces 163 marchalianus - Saccharomyces 361 - Saccharomyces cereuisiae var. marcillae - Prosporobolomyces 695 - Sporobolomyces 695 - Endomyces 287 - ff///za 287 margaritiferum - Oosporidium 598 - Trichosporon 598 marma - Candida 762 - Rhodotorula 819

361

- Rhodotorula rubra var. 821 - Torulopsis Candida var. 546 marinus, Cryptococcus 161 maris - Candida 523 - Torulopsis 523 maritima, Candida 523 maritimum, Trichosporon 523 martiniae, Saccharomyces 371 - Fabospora 236 - Guilliermondella 236 - Zygofabospora 236 - Zygorenospora 236 marjcia/fus - Dekkeromyces 236 - Kluyveromyces 236 - Kluyveromyces marxianus var. - Saccharomyces 236 - Zygosaccharomyces 236 marylandii, Debaryomyces 162

- Pzc/i/« 164 - Torulaspora 164 - Torulopsis 164 melissophilus, Debaryomyces 164 mellacei, Schizosaccharomyces 393 melligeri, Hanseniaspora 215

236

- Geotrichum 210 - Oidium 210 - Trichosporon 210 matalensis - Endomyces lactis var. 210 - Mycoderma 210 - Oospora 210 - Pseudomonilia 210 - Pseudomycoderma 210 matritense, Rhodotorula 821 matritensis - Citeromyces 146, 147 - Hansenula 146 matruchoti, Debaryomyces 161 mattleti, Cryptococcus 564 maydis, Ustilago 796 mazzae, Pseudomycoderma 237 - Pic/iifl 318 - Yamadazyma 318 megachiliensis, Trichosporonoides 874 megalospora - Bullera 735 - Pichia 352 megalosporus, Udeniomyces 735 melibiosaceum, Trichosporon 503 melibiosi - Candida 308 - Myxozyma 594 - Paratorulopsis 594 - Pichia vini var. 158 - Saccharomyces italicus var. 362 melibiosica - Candida 524 - Candida silvicola var. 488 melibiosophila, Candida 594 melibiosum - Cryptococcus 594 - Torulopsis 594 melibiosus, Saccharomyces uvarum var. 362 melinii, Candida 295 melissophila - Debaryozyma 164

- Moniliella 786 - Saccharomyces 429 - Saccharomyces bisporus var. 429 - Torula 786 - Zygosaccharomyces 429 mellis-acidi, Zygosaccharomyces 429 melobiosica, Candida melinii var. 223 membranaefaciens - Candida guilliermondii var. 329 - Debaryomyces 161 - Saccharomyces 319 membranifaciens - Candida 525 - Candida guilliermondii \2ir. 511 - Candida melibiosi var. 525 - Candida santamariae var. 550, 573 - Pic/iifl 319 - Saccharomyces 319 - Cryptococcus 821 - Torulopsis 821 meningitidis, Cryptococcus 656 mesenterica - Azymoprocandida 525 - Candida 525 - Pseudomonilia 525 - Tremella 716 mestris, Saccharomycodes 424 metalondinense, Myceloblastanon 477 metalondinensis - Candida 477 - Candida albicans var. 477 - Castellania 477 - Monilia 477 metapseudotropicalis, Monilia pseudotropicalis var. 237 metatropicalis - Castellania 563 - Monilia 563 metchnikoffi - Castellania 476 - Monilia 476 methanolica - Candida 488 - Pic/iia 321 methanolophaga, Candida 559 methanolovescens - Candida 324 - Torulopsis 324 methanophiles, Torulopsis 296 methanosorbosa - Candida 526 - Torulopsis 526 methanothermo - Pichia 352 - Torulopsis 286 methylica, Candida 488 methylivora, Pichia 321

Index to species and varietal names mexicana - Pichia 322 - Yamadazyma 322 meyerae - Candida 323 - Pichia 323 microellipsodes, Saccharomyces 430 microellipsoides - Saccharomyces 430 - Torulaspora 430 - Zygosaccharomyces 430 - Mon///a 787 - P/c/i/« 382 - Pichia belgica var. 315 microsporus, Sporidiobolus 696 milleriy Candida 526 mineralis, Torula 314 miniata, Torula 814 miniatis, Sporobolomyces 836 - Cryptococcus 162 - Debaryomyces nicotianae var. 162 - Dipodascus albidus var. 182 - Endomycopsis ohmeri var. 329 - Parendomyces 162 - Rhodotorula 162 - Tilletiopsis 851 - Torulopsis 162 - Torulopsis ethanolitolerans var. 503 - Trichosporon 860 minuscula, Pichia 304 mi/fi/to - Hansenula 324, 351 - Ogataea 324 - Oidium suaveolens var. 210 - Oospora fragrans war. 211 - Pic/iia 324 - Pichia minuta var. 324 - Rhodotorula 820 - Rhodotorula texensis var. 820 - Torw/a: 820 - Torulopsis 820 - Zygohansenula 324 mirabilis, Aureomyces 144 miscanthi - Bensingtonia 726 - Sporobolomyces 726 - Debaryomyces 162 - Hansenula 287 - P/c/j/a 304 - Pseudomonilia 564 - Pseudomycoderma 223 - Saccharomyces 304, 431 - Saccharomyces mangini var. 362 - Torulopsis 527 - Torulopsis uuae var. 532 - Zygopichia 304 - Zygosaccharomyces 431 mississippiensis, Pichia 151, 325 misumaiensis, Hansenula 352 miyagiana, Bullera 736 miyazi, Pichia 319

- Candida 527 - P/c/j/a 304 - Torulopsis 431 molardi - Endomyces All - Zymonema All molischiana - Candida 296 - Torula 296 - Torulopsis 296 molischianus, Cryptococcus

1047 mucoides, Trichosporon 868 mucorugosus, Cryptococcus 748

296

- Saccharomyces 367 - Saccharomyces carlsbergensis var. mongolica, Torulaspora 404 - Saccharomyces 370 - Saccharomyces delbrueckii var. - Zygosaccharomyces 404 moniliformis, Pichia 352 moniliiforme - Oidium 866 - Trichosporon 866 moniliiformis, Oospora 866

361

404

- Candida 305 - Mycoderma 223 - Mycotorula 305 - Torw/a 305 monospora - Ambrosiozyma 131, 384 - Endomycopsis 131, 133 - Endomycopsis fibuligera var. 131 - P/c/j/a 131 montana, Candida 527 montanae, Rhodozyma 718 montanus, Saccharomyces All montevideense, Trichosporon 867 montevidensis, Endomycopsis 867 monticola, Myxozynta 595 moriformis - Prototheca 884 - Tremella 111 mortifera - Candida 237 - Monilia 237 - Mycocandida 237 nfraA:// - Hansenula All - Saccharomyces 430 - Torulaspora 430 - Williopsis All - Williopsis saturnus var. 351, 417 - Zygosaccharomyces 234, 430 mucifera, Candida 400 mucilagina - Candida 595 - Myxozynta 595 mucilaginosa - Rhodotorula 820 - Torw/fl 820 - Torulopsis 820 mucinosa, Mycotorula 872 muciparus, Saccharomyces 236

- P/c/j/a 415 - Waltiozyma 415 - Williopsis 415 muelleri - Kloeckera 111 - Pseudosaccharomyces 111 muhira - Castellania 308 - Mo«z7/a 308 multigemmis - Candida 528 - Torulopsis 528 multis-gemmis, Torulopsis 528 multisporum - Trichosporon 865 - Trichosporon cutaneum var. 865 multisporus, Saccharomyces 361 muris - Mycotorula 820 - Proteomyces 820 murmanica, Monilia 564 - Candida 528 - Torulopsis 528 - Endomycopsis 340 - Hansenula 340 - P/c/i/« 340 muscorum - Azymocandida 822 - Candida 822 - Rhodotorula 822 - Azymocandida 569 - Candida 569 - Saccharomyces 569 mycophagus, Trichomonascus mycotoruloidea, Candida All

199

naardenensis - Brettanomyces 111, 451 - Decern 177,451,453 nabarroi - Castellania All - Monilia All - Monilia pinoyi var. 477 - Myceloblastanon All nadaensis, Torulopsis 748 nadsonii, Zygosaccharomyces 429 naeodendra, Candida 529 naganishii - Candida 164 - Pic/iifl 325 - Pichia alcoholophila var. 319 naganoensis - Bensingtonia 726 - Sporobolomyces 726 - Candida 526 - Torulopsis 526 nagpuri, Nematospora nakaseiy Pichia 326

202

1048

Index to species and varietal names

nakazawae - Pichia 327 - Pichia nakazawae var. 327 - Yamadazyma 327 nana - Eeniella 177, 452 - Lalaria 583 nanaspora, Candida 530 naniwaensis, Zygosaccharomyces nanus, Brettanomyces 452

- Blastobotrys 446 - Candida 563 - Castellania 563 - Hansenula 287 - Monilia 563 niveum, Myceloblastanon niveus, Endomyces 563

- Candida 502 - Torulopsis 502 nodinigri, Hanseniaspora 219, 220 non-liquefaciens, Monilia albicans var. nonfermentans - Hansenula 324 - Ogataea minuta var. 324 - P/c/i/fl 380 - Pichia minuta var. 324 nonmembranaefaciens, Brettanomyces bruxellensis var. 175 norbensis, Saccharomyces 362 431

- Castellania 308 - Endomyces 308 negroni, Syringospora 477 nematodophila, Botryozyma 449 nemodendra - Candida 531 - Torulopsis 531 neoformans - Cryptococcus 656, 762 - Debaryomyces 656 - Filobasidiella 656 - Filobasidiella neoformans var. 656 - Saccharomyces 656 neotropica, Myxozyma 597 nepalensis, Debaryomyces 164 nicotianae, Debaryomyces 162 - Mo«///a 787 - Moniliella suaveolens var. 787 - Torw/a 787 nigrescens, Trichosporonoides 875 nilssoni - Debaryomyces 405 - Saccharomyces 404 - Torulaspora 404 nipponensis, Myxozyma 597 nishiwakii, Zygosaccharomyces 424 nitens, Rhodotorula 759 nitrativorans, Candida 344 nitratophila - Candida 531 - Candida guilliermondii war. 314 - Torulopsis 531 - Torulopsis Candida var. 564 nitritophila, Torulopsis 821 Candida 676 Leucosporidium Mrakia 676 Vanrija 676

- Sporobolomyces 697 - Sporobolomyces photographus var. 697 oedocephalis, Trichosporonoides 875 ofunaensis - Hansenula 328 - Pic/iifl 328

563

424

nasalis - Cryptococcus 656 - Torula 656 natalensis, Candida 530 navarrensis - Blastobotrys AAl - Candida 524 - Torulopsis 524 nectairei - Fellomyces 780 - Kurtzmanomyces 780 - Sterigmatomyces 780 nectarophilus, Zygosaccharomyces neerlandica, Pichia 319

-

- Saccharomyces 361 - f^///a 287 odintsovae, Candida 532 odontiae, Myriogonium 198

- Candida 328 - Candida zeylanoides var. 328 - Pic/iia 328 norvegica - Candida 532 - Paratorulopsis 532 - Torulopsis 532 nothofagi - Apiotrichum 823 - Rhodotorula 823 nouuelii, Candida All noua-zeelandicus, Debaryomyces guilliermondii var. 161 nouakii, Geotrichum 211 nouellus, Candida 522 nubila, Oospora 210 nubilum, Oidium 210 nukamiso, Zygosaccharomyces 431 nussbaumeri, Zygosaccharomyces 429 obesa, Torulopsis bacillaris var.

481

- Ca«^/Ja 148, 151 - Candida parapsilosis var. 148 - Oospora lactis var. 210 obtusum, Oidium 210 occidentalis - Debaryomyces 165 - Debaryomyces occidentalis var. - Hanseniaspora 215 - Issatchenkia 221 - Kloeckera 215 - Kloeckeraspora 216 - Pseudosaccharomyces 215 - Schwanniomyces 165, 172 octospora, Hansenula 287 octosporus - Hansenula miso var, 287 - Octosporomyces 392 - Schizosaccharomyces 392

676 - Endomyces - Hansenula

287 287

165

476

- Endomycopsis 329 - Kodamaea 329 - Pic/i/a 329 - Yamadazyma 329 o/e<2, Candida 420 oleaceus, Saccharomyces 362 oleaginosus, Saccharomyces 362 oleophila, Candida 152, 420, 533 oligophaga, Zygozyma 434 olivarium, Candida 488 onubensis, Saccharomyces 362 onychis, Pichia 330 onychophila, Monilia 536 onychophilus, Saccharomyces cereoisiae var. 361 ooitensis, Candida 488 oosporoides - Blastodendrion All - Parasaccharomyces All opuntiae - Clavispora 150 - Lodderomyces 150 - Pic/i/fl 330 orbiculare, Pityrosporum 782 - Candida 534 - Candida obtusa var. 534 orientalis - Debaryomyces 162 - Issatchenkia 222, 351 - P/c/?/« 223, 226, 352 - Saccharomyces 223 - 5M//^ra 736 - Trichosporon 791 oryzicola, Sporobolomyces 835 osloensis, Torulopsis 431 osmophila - Hanseniaspora 216 - Kloeckeraspora 216 osmophilus - Kluyueromyces 429 - Saccharomyces 431 - Saccharomyces bailii var. 431 - Saccharomyces microellipsodes var. osmundae, Mixia 357 osornensis, Candida 537 osualdi, Apiotrichum 544 ot;(a!/g, Pityrosporum 782 - Candida 535 - Cryptococcus albidus var. - Malassezia 782

748

405

Index to species and varietal names - Mycotoruloides All - Saccharomyces 782 ovaria, Pichia 352 ovetensis - Dipodascus 190 - Endomyces 190 - Endomycopsis 190 - Zendera 190 ouiformis, Saccharomyces 361 ovoidesy Trichosporon 869 oxidans, Saccharomyces 362

- Candida 563 - Castellania 563 - Endomyces 563 - Monilia 563 - Mycocandida 563 parazeylanoides, Monilia 572 pardi, Trichosporon 872 parvus, Sympodiomyces 603 pastinacae, Itersonilia 775

pachycereana, Pichia amethionina var. pachydermatis - Malassezia 782 - Pityrosporum 782 pachydermus, Protomyces 356 pallescenSf Tilletiopsis 851 pallida, Rhodotorula 820 palmicolum, Agaricostilbum 639 palmioleophila, Candida 535 paludigena, Candida 536 paludigenum, Rhodosporidium 687 paludosus, Geotrichoides 860 pampelonensis - Candida 524 - Torulopsis 524 panicea, Sitodrepa 590 paniceum, Stegobium 590 panw, Hansenula 287 paphiopedili, Sympodiomycopsis papilionaceusy Trimorphomyces paradoxa, Mycoderma vini var.

846 111 569

- Saccharomyces 366 - Zygosaccharomyces 366 - Zygosaccharomycodes 366 parakrusei - Candida 223 - Castellania 223 - Monilia 223 - Myceloblastanon 223 paralipolytica, Candida 420 paranensis, Candida 308 parapsilosis - Candida 255, 536 - Monilia 536 - Mycocandida 536 pararosea - Rhodotorula mucilaginosa var. 821 - Torulopsis mucilaginosa var. 821 - Cryptococcus 821 - Sporidiobolus 694 - Sporobolomyces 694 pararugosa ~ Candida 399, 538 - Hemispora 872 - Mycoderma 872 pararugosum, Trichosporon 872 parasitica, Oospora lactis var. 210 parasiticus, Endomyces 196 paratropicale, Myceloblastanon 563 paratropicalis - Atelosaccharomyces

563

284

- Petasospora 331 - Saccharomyces 331 - Zygosaccharomyces 331 - Zygowillia 331 - Zymopichia 331 pastorianus, Saccharomyces 367 pastorianus-arborescens, Saccharomyces 305 pastoriensis, Prototheca 887 pastoris - Komagataella 331 - Pichia 331 patauinus, Brettanomyces 175 peiping, Pseudohansenula 344 pe^a, Saccharomyces 362 pelliculatus, Pachysolen 271 pelliculosa - Candida 287 - Kloeckera lindneri var. 217 - Mycocandida 287 - Saccharomyces cereuisiae var. 362 peltata - Candida 538 - Selenotila 538 - Selenozyma 538 - Torulopsis 538 - Rhodotorula 759 - Trichosporon cutaneum var. 857 penicillatum - Geotrichum 578 - Trichosporon 578 penicillatus - Fellomyces 110 - Sterigmatomyces 770 peniophorae, Colacogloea 618 periphelosum, Candida 162 periunguealis - Monilia 411 - Mycotorula 477 - Parendomyces All perplexans, Itersonilia 775 perryi, Parendomyces 563 persoonii - Debaryomyces occidentalis var. 165 - Schwanniomyces 165 - Schwanniomyces occidentalis var. 165 perspicillatus, Zygosaccharomyces 429 petersonii - Hansenula 332 - Pic/iifl 332 petrohuensis, Candida 539 petrophilum - Brettanomyces 537 - Candida 420

1049 - P/c/?/a 304 - Torulopsis 420 pezizoidea, Tjibodasia

618

phajfii - Debaryomyces 166 - Fabospora 239 - Kluyveromyces 239 - Torulaspora 166 phaseoli, Nematospora 202 phaseolospora - Guilliermondella 234 - Zygofabospora 234 phaseolosporus - Dekkeromyces 234 - Kluyveromyces 234 - Saccharomyces 234 philentoma, Ambrosiozyma 131 philentomus, Hormoascus 131 philippovi, Sporobolomyces 697 philippovii, Mastigomyces 561 philodendra, Hansenula 333 philodendri - Hansenula 333 - Ogataea 333 - Pic/iia 333 philogaea - Pichia 333 - Yamadazyma 333 philyla - Candida 823 - Rhodotorula 823 - Torulopsis 823 - Vanrija 823 phoenicis, Graphiola 615 photographa, Torula 836 photographus, Sporobolomyces 836 phyllada, Bensingtonia 111 phyHades, Sporobolomyces 111 phylladus - Bensingtonia 111 - Sporobolomyces 111 phyllomatiSf Sporobolomyces 835 phylloplana, Rhodotorula 824 phylloplanus, Cryptococcus 824 piceae, Kluyveromyces lAl pignaliae - Candida 539 - Torulopsis 539 pijperi - Hanseniaspora 334 - Pic/iifl 334 pilati - Rhodotorula 824 - Torulopsis 824 pilimanae, Rhodotorula 821 pilmaiquensis, Candida 523 pmaw, Schizosaccharomyces 393 -

Candida 540 Ogataea 334 Petasospora 334 Pic/iia 334 Saccharomyces 334 Zygosaccharomyces 334 Zygowillia 334

1050

pinoyi - Blastodendrion 476 - Candida 476 - Endomyces 476 - Monilia 476 - Myceloblastanon 476 - Mycotorula 476 pinoysimilis - Blastodendrion All - Candida 411 - Cryptococcus 411 - Monilia 477 - Mycocandida 477 pintolopesii - Candida 134 - Torulopsis 134, 135 pinus - Paratorulopsis 540 - Torulopsis 540 piricola, Udeniomyces 737 piscium, Trichosporon 572 placentae - Candida 431 - Saccharomyces 431 platypodis - Ambrosiozyma 132, 384 - Endomycopsis 132, 133 - Hansenula 132 - Hormoascus 132 pleomorphus, Saccharomyces 573 plicata - Rhodotorula mucilaginosa var. 821 - Torulopsis mucilaginosa var. 821 plimmeri - Cryptococcus 656 - Saccharomyces 656 - Torula 656 - Torulopsis 656 podzolica, Candida 762 podzolicus, Cryptococcus 762 pollaccii, Sporobolomyces 836 pollinis - Moniliella ISl - Moniliella tomentosa var. 787 polyborus - Fellomyces 111 - Sterigmatomyces 111 polymorpha - Candida 348 - Debaryozyma 166 - Hansenula 152, 286 - Ogataea 286 - P/c/i/« 166, 172 - Torulaspora 166 polymorphum, Sterigmatosporidium 700 polymorphus - Debaryomyces 166 - Saccharomyces 166 - Saccharomyces carlsbergensis var. 361 - Saccharomyces rouxii var. 429, 431 - Zygosaccharomyces 431 polyporicola - Dipodascus 195 - Endomyces 195

Index to species and varietal names polysporus - Kluyveromyces 239 - Saccharomyces 239 polystichi, Lalaria 583 pombe - Saccharomyces 393 - Schizosaccharomyces 393 populi - Candida 541 - Hansenula 335 - PicA/fl 335 populi-salicis, Lalaria 583 populina, Lalaria 583 portoricensis - Prototheca 886 - Prototheca zopfii var. 886 pozolis, Hansenula 237 praecisus, Saccharomyces 362 pratensis - Komagataea 415 - Williopsis 415 pretoriensis - Saccharomyces 406 - Torulaspora 406 procerum, Blastodendrion Til productiua - Hansenula 287 - Hansenula anomala var. 287 - Monilia 287

- fr////«

287

proliferansj Blastobotrys 447 prolifica, Pseudozyma 794 prostoserdovii, Saccharomyces 362 pruni-subcordataBy Lalaria 583 pseudoaeria - Paratorulopsis 748 - Torulopsis 748 pseudoalba, Bullera 738 pseudoalbicans - Monilia 477 - Myceloblastanon 477 - Mycoderma 477 pseudobronchialis, Monilia 563 pseudocactophila, Pichia 336 pseudocandidum, Geotrichum 211 pseudoglaebosa, Candida 573 pseudoguilliermondii - Castellania 308 - Mo«///a 308 - Monilia guilliermondii var. 308 pseudointermedia, Candida 541 pseudolambica, Candida 542 pseudolipolytica - Candida 420 - Saccharomycopsis 420 pseudolondinensis - Castellania 477 - Monilia 477 - Monilia metalondinensis var. 477 pseudolondinoides - Castellania 477 - Monilia 477 pseudometalondinensis - Castellania 477 - Monilia 477

pseudopolymorpha - Debaryozyma 167 - P/cA/« 167 - Torulaspora 167 pseudopolymorph us - Debaryomyces 167 - Saccharomyces 167 pseudotrichosporon, Blastoschizomyces pseudotropicalis - Atelosaccharomyces 237 - Candida 237 - Castellania 231 - Endomyces 237 - Monilia 237 - Myceloblastanon 237 - Mycocandida 237 - Mycotorula 237 psicrophilicus, Cryptococcus 656 psilose, Myceloblastanon 476 - Candida 476 - Monilia 476 - Syringospora 476 psychrophila - Candida 542 - Torulopsis 542 ptarmiganii, Torulopsis 748 pulcherrima - Candida 264, 543 - Chlamydozyma 264 - Eutorula 264 - Metschnikowia 264 - Rhodotorula 264 - Tbrw/a 264 - Torulopsis 264 pulcherrimum, Agaricostilbum 639 pulcherrimus, Saccharomyces 264 pullulans - Aureobasidium 124, 916 - Basidiotrichosporon 869 - Mo«///a 869 - O/of/wm 869 - Oospora 869 - Trichosporon 869 pulmonale, Geotrichum 821 pulmonalis - Candida 476 - Castellania 476 - Endomyces 476 - Monilia 476 - Mycotorula 821 - Saccharomyces cereuisiae var. 361 pulmonea - Monilia 872 - Oospora SI2 pulmoneum - Geotrichum 872 - Mycoderma 872 - Neogeotrichum 872 - 0/^/Mw 872 pulque, Pichia 319 pulquensis, Kloeckera corticis var. 218 pulverulenta, Mycoderma 287 pulverulentum - Endoblastoderma 287

18

Index to species and varietal names - Mycoderma cereuisiae var. 287 pulverulentus, Cryptococcus 836 punctispora, Pichia 319 punctisporus, Saccharomyces mycoderma 319 punicea - Bullera 739 - Candida 739 - Udeniomyces 739 puniceus, Sporobolomyces 739 purpurascens, Lalaria 584 pustula - Candida 825 - Rhodotorula 825 - Torulopsis 825 pycnidioideum, Heterogastridium 614 - 5ii//era 737 - Udeniomyces 737 pyriformans, Itersonilia 775 pyriformis, Saccharomyces 319 querci, Candida parapsilosis var. quercibus, Zymopichia 337 quercitrusuy Candida 543 quercus, Candida 543 quercuum - Candida 543 - PicAia 337 - Sporopachydermia 397 queretana, Candida 488

543

rabaulensisy Pichia 337 radaisii, Pichia 352 radiatus, Cryptococcus 821 railenensiSy Candida 544 ralunensis, Candida 489 rancensis, Candida 265 ravautii, Candida 494 rauennatis, Zygosaccharomyces 429 rectangulatum, Geotrichum 577 redaellii, Geotrichum 211 - Dipodascus 212 - Endomyces 212 - Galactomyces 212 requinyii, Candida 111 reukaufii - Anthomyces 260 - Ca/irfiV/a 265, 545 - Chlamydozyma 265 - Metschnikowia 265 - Nectaromyces 260 rhagii - Candida 545 - Candida tropicalis var. rhodanensis - Petasospora 338 - Pic/iia 338 - Saccharomyces 338 - Zymopichia 338 rhodohalophila, Candida - Cryptococcus

718

545

567

^fl 718,789 ribeiroi, Trichosporon 872 richmondi - Castellania All - Monilia All richteri - Nadsonia 269 - Zygosaccharomyces 431 rignihuensis, Candida 513 robertsiae - Debaryomyces 168 - P/cA/a 168

- Ascoidea 139, 140 - Mycotorula 690 - Rhodotorula 690 - Rhodotorula glutinis var. 690 - 7brw/a 690 rubicundula, Pseudomonilia 697 rubicundulus, Sporobolomyces 697

- P/cA/fl 168 - P^wgea 168 robinii, Syringospora 476 robinsoniana, Lalaria 584 - CanJ/J« 361, 362 - Hansenula anomala var. 287 - Mycotorula 2)61 robustum, Geotrichum 867 robustus, Saccharomyces 362 rohrbachense - Kloeckera brevis var. 217 - Torulopsis dattila var. 264 - P/cA/a 815 - Rhodotorula 815 ra^ea, Torulopsis 264 rosea-corallina, Mycotorula -

1051

814

Debaryomyces 404 Saccharomyces 404 Torulaspora 404 Zymodebaryomyces 404

- Saccharomyces 814 - Sporobolomyces 836 - Torulopsis 814 rosinii, Saccharomyces 367 rotunda, Monilia 872 rotundata - Candida 872 - Oospora 872 - Torulopsis 748 rotundatum - Geotrichum 872 - Myceloblastanon 872 - Mycoderma SI2 - Oidium 872 - Trichosporon 872 rotundus, Endomyces 872 roiucii - Saccharomyces 431 - Zygosaccharomyces 111, 431 rubefaciens, Torula 264 rubella, Rhodotorula 821 - Ballistosporomyces 837 - Cryptococcus 820 - Saccharomyces 820 - Sporobolomyces 695, 837 ruberrimus, Sporobolomyces ruberrimus var. 836

- Amphierna 836 - Rhodotorula 820 - rort//« 814 - Torulopsis 820 - Torulopsis pulcherrima var. 264 rubrorugosus, Cryptococcus 821 rw/w/a - Rhodotorula 814 - Rhodotorula glutinis var. 814 - Torw/a 814 - Torulopsis 814 rufusa, Rhodotorula glutinis var. 690 rugopelliculosa, Candida 545 rugosa - Azymocandida 546 - Candida 546, 872 - Hemispora 872 - Moni7/fl 546, 872 - Mycoderma 546, 872 - Mycotorula 546 - Pichia fermentans YSLT. 319 n/go5Mm - Geotrichum Sll - Trichosporon Sll rugosus - Endomyces Sll - Parendomyces Sll - Zygosaccharomyces 431 rugulosa - Pseudozyma 794 - Sporothrix 794 rugulosus, Stephanoascus 403, 794 ruineniae, Sporidiobolus 696 rutilans, Tricholomopsis 196 sablieri, Brettanomyces claussenii var. 174 saccharicola, Candida krusei var. 549 saccharini, Torulopsis 498 saccharophila, Pichia 319 saccharum, Torulopsis 411 saitoanay Candida 546 saitoanus, Saccharomyces 405 saitoi - Pichia 389 - Rhodotorula glutinis var. 814 - Saturnispora 389 - Torulopsis 814 -

Candida 547 Debaryomyces 162 Eutorulopsis 547 P/c/jza 304 Saccharomyces 361 Torulopsis 547 Zygopichia 304 Zygosaccharomyces AlA

Index to species and varietal names

1052 salicaria, Pichia 338 salicina, Bullera 838 salicinus, Sporobolomyces 838 salicorniae, Williopsis 416 salinaria, Rhodotorula glutinis var. 688 salmanticensis - Candida 548 - Torulopsis 548 salmoneus - Sporobolomyces salmoneus var. 836 - Sporobolomyces salmonicolor var. 836 salmonicola, Candida 547 salmonicolor - Aessosporon 697 - Blastoderma 697 - Prosporobolomyces 697 - Sporidiobolus 697 - Sporobolomyces 697, 839 salmonis, Prototheca 886 salsa, Zygopichia 431 salsus, Zygosaccharomyces 431 -

Rhodotorula 821 Rhodotorula mucilaginosa var. rorw/« 821 Torulopsis 821

821

- Cryptococcus 821 - Rhodotorula 821 - Torulopsis 821 - Kloeckera 216 - Pseudosaccharomyces 216 santamariae, Candida 549 santawensis, Schizosaccharomyces 393 santjacobensis, Candida 550 saprolegnioides, Ascoidea 140 sargentensis - Pichia All - Williopsis 417 - Williopsis saturnus var. 351, 417 sasicola, Sporobolomyces 839 saturnospora, Pichia 413 - Hansenula 416 - Saccharomyces 416 - f^///a 416 - Williopsis 416 - Williopsis saturnus var. 416 savonica, Candida 550 scandinavicus, Saccharomyces 305 scaptomyzae, Pichia 319 schanderlii, Brettanomyces 175 - Candida 551 - Torulopsis 551 schneggii - Endomyces 287 - Hansenula 287 - Hansenula anomala var. - P^Y//a 287 - Arthroascus 380 - Endomyces 380 - Saccharomycopsis

380

- Endomycopsis 339 - Pic/iifl 339, 384 - Yamadazyma 339 scopularumy Endomyces scottii - Azymocandida 673 - Candida 612) - Leucosporidium 673 - Vanrija 673 -

195, 384

Issatchenkia 224 Issatchenkia scutulata var. Pichia 226 Pichia scutulata var. 224

- Myceloblastanon All - Mycocandida All slooffiae - Candida pintolopesii var. 134 - Rhodotorula 820 - Schizosaccharomyces 392

224

- Candida 134, 135 - Torulopsis pintolopesii Yai. slouaka, Nadsonia 757

- Pic/iifl 340 - Yamadazyma 340 selenospora - Endomycopsis 381 - Guilliermondella 381 - Saccharomycopsis 381 seqbwema, Prototheca 886 sequanensis, Candida 551 sericea, Oospora 190 - Ascotrichosporon 191 - Geotrichum 190, 191, 579 - Trichosporon 190 serricorne, Lasioderma 590 servazzii, Saccharomyces 368 shaoshing, Saccharomyces 361 - Candida 272, 552 - Candida shehatae var. 552 sheppei, Torulopsis neoformans var. shibatana, Torula 694

656

shibatanus, Sporobolomyces 694, 839 sicereum, Pichia membranaefaciens var. silvae, Candida 553 silvanorum, Candida 554 5i7t;arica - Candida 554 - Torulopsis 554 - Pzc/j/o! 319 - Saccharomyces

365

- Candida 312 - Hansenula 340 - Pic/iifl 340 silvicultrix, Candida

555

- Blastodendrion 821 - Cryptococcus 821 - Hyalodendron lignicola var.

287

- Saccharomycodes 269, 270, 373 singularis - 5w//era 839 - Sporobolomyces 839 sirexii, Myxozyma 597 skinneri, Cryptococcus 763 skutetzkyi

- i/o/Zeya 205, 207 - Nematospora 205, 207 sinecaudum, Eremothecium sinense, Trichosporon 871 - J5«//em 739 - Mycotorula All - Rhodotorula 650

773

205

319

134

- Stephanoascus 402 - Zygozyma 434 smittii, Saccharomyces 365 socialis, Cryptococcus 765 sociasii, Saccharomyces 23A sojae, Candida 573 solani, Candida 555 5o/z, Candida 221 solicola, Candida 223 somala, Torulopsis 836 sonckii - Candida 826 - Rhodotorula 826 sonorensis - Candida 556 - Torulopsis 556 500>y«', Candida 223 sophiae-reginae, Candida 556 sorbitophila, Pichia 304 sorbophila - Candida 399, 557 - Torulopsis 557 sorbosa, Candida 221 sorboxylosa, Candida 558 - Candida guilliermondii var. 308 - Saccharomyces 431 - Zygosaccharomyces 431 - Zygosaccharomyces japonicus var. spandovensis - Candida 558 - Torulopsis 558

431

- Pic/iifl 341 - Yamadazyma 341 spathulata, Trichosporonoides 876 spencer-martinsiae, Lipomyces kononenkoae ssp. 250 spencerorum, Saccharomyces 368 sphaerica - Hansenula 287 - Hansenula anomala var. 287 - Tbrw/a 234 - Torulopsis 234 sphaericus - Brettanomyces 502 - Cryptococcus 234

Index to species and varietal names - Saccharomyces 287, 782 sphaerocarpuntf Rhodosporidium 688 spherica, Candida 233, 234 spicatum, Sporotrichum 186 spicifer, Dipodascus 191 sporotrichoides - Trichosporiella 870 - Trichosporon 870 stagnora, Prototheca 885 starkeyi, Lipomyces 142, 252 starkeyi-henricii, Schizoblastosporion 270, 602 steatolytica, Candida 422 steineri, Saccharomyces 362 - Candida 559 - Torulopsis 559 - Zygosaccharomyces polymorphus f. stellatoidea - Candida All - Candida albicans var. 477 - Monilia All - Procandida All - Syringospora All stellatus - Cryptococcus 559 - Saccharomyces 559 stellimalicola, Candida 573 - Pichia 272, 342 - Yamadazyma 342 - Leucosporidium 676 - Mrakia 676 strasburgensis - Petasospora 343 - Pic/iia 343 - Saccharomyces 343 - Zymopichia 343 strues, Reniforma 798 - Cfl«JiWa 757, 787 - Cladosporium ISl - Cylindrium 757 - Geotrichum ISl - Hansenula 417 - Moniliella 7S1 - Oidium 577, 757 - Oospora 757, 787 - P/c/?/a 417 - Sachsia 757, 787 - Sachsiella ISl - Williopsis 417 - Williopsis saturnus var. 417 subbrunneusy Sporobolomyces 840 subglobosa, Eutorulopsis 162 subglobosus - Debaryomyces 162 - Debaryomyces matruchoti var. 162 subpelliculosa - Endomycopsis 344 - Hansenula 344 - Hansenula anomala var. 344 - Pic/iifl 344 subrosea, Bensingtonia 728

429

subroseus, Sporobolomyces 728 subsufficiens - Hansenula saturnus var. 417 - Williopsis All - Williopsis saturnus var. 417 subtropicalis, Candida 522 succiphila, Candida 559 suecica, Candida 560 suganii - Rhodotorula 814 - Torw/a 814 sulphurea, Monilia 237 sulphureus, Cryptococcus 237 suomiensisy Zygozynta 435 sydowiorum - Hansenula 344 - Pichia 344 syluestre, Saccharomyces cereuisiae agavica 361 sympodialis, Malassezia 783 synnaedendra, Saccharomycopsis 382, 384 synnaedendrus, Botryoascus 382 taboadae, Torulopsis 405 toiYo, Schizosaccharomyces talicei, Parasaccharomyces

393 564

- Debaryomyces 172, 567 - Debaryozyma 567 - Pichia 567 - Torulaspora 567 tamarindi, Candida 223 tamarindii, Procandida 223 tamarindorum, Pichia 352 - Mycoderma 319 - Mycokluyveria 319 tannicola, Pichia 112, 345 tannophilus - Hansenula 271 - Pachysolen 11 \ tannotolerans - Candida 243 - Torulopsis 2A3 tanzawaensis, Candida 561 tapaniensis, Schizosaccharomyces var. 393 tardus, Kurtzntanomyces 781 taurica, Pichia 352 - Arxiozynta 134 - Saccharomyces 134 tellustris, Saccharomyces

formosensis

134, 135

- Candida 561 - Sporobolomyces 836 f^/?a^, Candida 562 terebra, Candida 322 terrea, Rhodotorula 814

- Torulopsis 682 terreus, Cryptococcus

764

- Issatchenkia 225 - P/c/?/a 225, 226 - Cryptococcus 748 - Saccharomyces 225 tetrasperma - Dipodascus 192 - Endomyces 192 - Zendera 192 tetraspora - Saccharomyces cereuisiae var. 366 - Saccharomyces mangini var. 366 tetrasporus - Lipomyces 252 - Zygolipomyces 252 - Rhodotorula 820 - Rhodotorula minuta var. 820 thailandica, Kockovaella llS thermantitonum, Saccharomyces 361 thermophilus, Endoblastomyces 223 thermotolerans - Candida lipolytica var. 420 - Kluyveromyces 240 - Pic/iiVi 346 - Pichia opuntiae var. 346 - Saccharomyces 240 - Zygofabospora 240 - Zygosaccharomyces 240 threntensis, Zygosaccharomyces major var. 431 tikumaensis, Zygosaccharomyces 304 ?//z(2e, Platygloea 618 to^o, Saccharomyces 361 tokyoensis - Candida parapsilosis var. 308 - Rhodotorula 820 toletana, Pichia 346 toletanus - Debaryomyces 346 - Zymodebaryomyces 346 tomentosa - Monilia ISl - Moniliella ISl tonsillae - Mycotorula All - Torulopsis 563 tonsillarum, Cryptococcus All torresii - Candida 562 - Torulopsis 562 toruloides, Rhodosporidium 690 - Saccharomyces 404 - Saccharomyces cheualieri var. tosquinetii, Lalaria 584

- Geotrichum 442 - Trichosporon 442 - Arxula 442 - Saccharomyces cereuisiae var.

1053

366

- Dipodascopsis 178 - Dipodascus 178 transitoria, Candida krusei var. transvaalensis - Pachytichospora 369

404

305

1054

Index to species and varietal names

transvaalensis (cont d) - Saccharomyces 369 trehalophila, Pichia 347 tremoniensis - Debaryomyces 161 - Debaryomyces fabryi var. 161 triadis - Candida All - Monilia 411 - Mycotoruloides All triangularis, Pichia 348 trigonopsoides, Candida 328 trimorpha - Mycotorula 564 - Mycotoruloides 564 trispora - Prototheca 886 - Prototheca portoricensis var. 887 tropicale - Myceloblastanon 563 - Oidium 563 tropicalis - Actonia All - Atelosaccharomyces 563 - Candida 255, 563 - Castellania 563 - Endomyces All, 563 - Monilia 563 - Procandida 563 - Prototheca 887 trumpyi - Endomyces 319 - Pichia chodati var. 319 - Willia 319 truncata, Candida All tsuchiyae, Candida 564 tsugae - Bullera 841 - Sporobolomyces 841 tsukubaensis - Candida 795 - Cryptococcus 795 - Pseudozyma 795 - Vanrija 795 tubiformis, Saccharomyces 360 tumefaciens-album, Myceloblastanon 476 tumefaciens-albus, Saccharomyces 476 turbidans - Saccharomyces 361 - Saccharomyces cerevisiae van 361 turicensis, Saccharomyces intermedins var. 361 tursiopsis, Sterigmatomyces 769 tuxtlensis, Candida parapsilosis var. 308 typica, Zygosaccharomyces polymorphus f. 431 tyrocola, Debaryomyces 161 tyrolensis, Cryptococcus 765 ubrizsyi, Prototheca

886

- Debaryomyces 169 - Afyjco^wa 596 ukrainica, Hansenula 287 ukrainicus, Schwanniomyces

165

ulmea, Prototheca 885 u/ufi^ Lalaria 584 ulzamae, Rhodotorula 821 umbra, Saccharomyces ellipsoideus var. undulatum - Hyalodendron lignicola var. 773 - Trichosporon SI2 unguis, Mycotoruloides 536

362

- Oidiomyces 476 - Onychomyces 476 - Saccharomyces 476 uniguttulata, Eutorulopsis 667 uniguttulatum, Filobasidium 667 uniguttulatus - Cryptococcus 667, 765 - Cryptococcus neoformans var, 667 uninucleata - Dipodascopsis 179 - Dipodascopsis uninucleata var. 179 uninucleatus, Dipodascus 179 unisporus, Saccharomyces 370 urugaiensis, Cryptococcus diffluens var. 748 MftViS

-

Ca/i
- Asporomyces 264 - Cryptococcus 572 - Monilia 572 - Syringospora 572 - Torulopsis 572 uvarum - Hanseniaspora 111 - Kloeckeraspora 217 - P/c///a 352 - Saccharomyces 360 - Zygopichia 352

vaccina, Candida

565

- Saccharomyces 405 - Torulaspora 405 vaginalis, Monilia All valbyensis - Endomyces 218 - Hanseniaspora 218 valdensis - Saccharomyces carlsbergensis var. 361 - Saccharomyces intermedius var. 360 valdiviana, Candida 566 valesiacus, Saccharomyces 361 - Cfl/f^iWfl 319,566 - Mycoderma 319 - Mycokluyveria 319 ualidus, Saccharomyces 361 vanderwaltii - Candida 566 - Myxozyma 596 - Torulopsis 566 vanillica, Rhodotorula 827

vanlaeriana - Candida krusei var. 319 - Mycoderma 319 vanriji - Azymomyces 170 - Candida 547 - Debaryozyma 170 - P/c/i/« 170 - Torulaspora 170 vanrijiae - Debaryomyces 170 - Debaryomyces vanrijiae var. - Geotrichum 862 - Pic/?/a 170

170

- Kluyveromyces 234 - Kluyveromyces marxianus var. 234 - Saccharomyces 234 vanzylii, Torulopsis 532 variabile, Trichosporon 293 variabilis - Bullera 740 - Candida 293 - Mo«///« 293 - Oospora 293 - Proteomyces 872 - Torulopsis pulcherrima var. 264 - Trigonopsis 399, 605 - Zygosaccharomyces 431 vartiovaarae - Candida 567 - Torulopsis 567 vartiovaarai, Torulopsis 567 vercitillatus, Saccharomyces 537 - Candida 322 - Kluyveromyces 240 - P/c/i/a 348 - Saccharomyces 240 - Sporidiobolus 697 - Trichosporon 322 versatilis - Brettanomyces 567 - Ca«
Brettanomyces 175 Brettanomyces bruxellensis var. Candida 569 Debaryomyces 158 Endomycopsella 383 Endomycopsis 383

175

391

Index to species and varietal names

- Monilia 174 - Mycoderma 569 - Mycokluyveria 569 - Oospora 174 - Pichia 158 - Saccharomyces 362 - Saccharomycodes 372 - Saccharomycodes ludwigii var. 372 - Saccharomycopsis 383 - Zygosaccharomyces 431 vini-lafarii, Mycoderma 319 vini-muntz, Saccharomyces 361 virginica, Lalaria 584 uiscosa, Prototheca 885 vishniacii, Cryptococcus 765 viswanathii, Candida 255, 570 vladimirii, Cryptococcus vishniacii var. vordermanii - Saccharomyces 361 - Schizosaccharomyces

393

- Saccharomyces 537 - Zymopichia 537 vuillemini - Endomyces 476 - Guilliermondella 476 - Mycotorula albicans var. 476 vuilleminii, Rhodotorula 821 - Candida 563 - Geotrichoides 563

- Dipodascopsis uninucleata var. - Endomycopsis 349 - Guilliermondella 242 - Hansenula 305 - Kluyveromyces 242 - Metschnikowia 259 - Ogataea 305 - Pic/iifl 349, 384 - Prototheca 886 - Saccharomyces 242 - Torulopsis 570 - Zygofabospora 242 wiesneri, Taphrina 601 - Kluyveromyces 236 - Kluyveromyces marxianus var.

179

- Kluyveromyces 241 - Zygofabospora 241 washingtonensis, Tilletiopsis 852 weijmanii, Sporobolomyces 725 westerdijkii, Torulopsis 162

xanthus - Ballistosporomyces 841 - Sporobolomyces 841 xestobii - Candida 571 - Torulopsis 571 xylinus, Torulopsis 308 xylopsoci, Pichia 330

- Candida 570 - Dekkeromyces 242

- Pic/iia 350 - Zymopichia 350

170

- Bensingtonia 729 - Sporobolomyces 729 236 zambettakesii - Endomyces 861 - Geotrichum 861 - Schizosaccharomyces zaruensis - Pichia 390 - Saturnispora 390

216 361

- Endomycopsis 295 - Hansenula 295 wingfieldii - Sterigmatomyces 878 - Tsuchiyaea 878 wo/^/, Cryptococcus vishniacii var. wrightensis, Cryptococcus 765

yamadae - Debaryomyces 111 - Debaryozyma 171 yamatoana, Bensingtonia 729 yamatoanus, Sporobolomyces 729 - Cryptococcus 765 - Debaryomyces 170 - Debaryomyces vanrijiae var. - Kluyveromyces 243 - Torulaspora 170 jV'eJo, Saccharomyces 361

765 - Kloeckera 216 - Pseudosaccharomyces willianus, Saccharomyces

1055

765

861

- Azymocandida 571 - Candida 571 - Monilia 571 - Mycotorula 571 - Parendomyces 571 - Pseudomonilia 571 zobellii - Metschnikowia 266 - Metschnikowia bicuspidata var. - Metschnikowiella 266 - Prototheca 886 - Prototheca zopfii var. 886 zsoltii, Rhodotorula 820 zygoto - Chlamydozyma 265 - Metschnikowia 265

266

This Page Intentionally Left Blank